Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1721
Parameters: 2 7 7 80 10 50 1000
Length:  14716

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1188--1223
18
2.0
18
100
0
72
44
11
5
38
1.63
1613--1641
2
14.5
2
100
0
58
0
48
0
51
1.00
4372--4418
12
4.0
12
77
5
51
23
4
2
70
1.16
4373--4418
23
2.0
24
86
4
67
23
4
2
69
1.17
4512--4631
56
2.1
59
83
9
151
40
10
1
46
1.49
4733--4828
16
6.1
16
76
7
90
33
2
1
63
1.13
4808--4891
14
6.1
14
74
19
70
41
3
0
54
1.17
4798--4914
27
4.1
28
73
16
82
41
2
0
56
1.13
5286--5343
17
3.2
18
79
16
57
53
1
0
44
1.10
5319--5434
54
2.2
55
79
14
136
53
0
0
45
1.06
5666--5711
11
4.2
11
80
0
56
73
2
0
23
0.94
5658--5714
22
2.7
22
84
10
75
71
1
1
24
1.04
8695--8719
13
1.9
13
100
0
50
36
16
16
32
1.90
8674--8735
33
1.9
32
90
3
97
29
14
14
41
1.85
8704--8760
20
3.0
20
76
7
64
31
15
15
36
1.90
8807--8831
13
1.9
13
100
0
50
24
16
20
40
1.91
9942--9972
3
10.3
3
92
0
53
35
0
35
29
1.58

Tables:   1

The End!