Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1734
Parameters: 2 7 7 80 10 50 1000
Length:  26728

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1303--1396
47
2.0
46
82
13
113
45
0
0
54
0.99
1336--1380
18
2.6
17
82
6
56
44
0
0
55
0.99
1326--1375
18
2.9
17
77
8
57
46
0
0
54
1.00
3656--3742
21
4.2
21
69
17
65
41
0
1
57
1.06
3665--3702
13
2.8
13
81
18
51
34
0
0
65
0.93
3664--3729
34
1.9
35
84
9
91
37
0
1
60
1.06
3689--3742
28
1.9
28
88
7
83
42
0
1
55
1.10
5417--5448
15
2.1
15
94
0
55
59
0
9
31
1.29
5420--5452
10
3.3
10
95
0
57
60
0
12
27
1.32
8572--8616
23
1.9
24
81
4
56
37
0
0
62
0.96
9686--9894
103
2.0
103
88
1
312
32
14
24
27
1.95
14715--14782
33
2.1
32
86
2
91
33
14
16
35
1.89
14738--14762
13
1.9
13
100
0
50
36
16
16
32
1.90
15501--15538
19
2.0
19
94
0
67
21
34
0
44
1.52
16920--16971
20
2.4
21
84
12
70
3
26
50
19
1.65
17410--17448
13
3.0
13
92
0
69
33
15
20
30
1.94
19016--19041
8
3.2
8
100
0
52
15
0
23
61
1.33
19242--19278
11
3.0
13
76
15
51
29
21
16
32
1.95
19713--19764
20
2.4
21
87
9
70
19
50
26
3
1.65
21151--21187
19
1.9
19
94
0
65
43
0
35
21
1.53
23057--23103
24
1.9
25
86
4
69
0
6
8
85
0.75

Tables:   1

The End!