Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1736
Parameters: 2 7 7 80 10 50 1000
Length:  28678

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1090--1159
24
2.8
25
89
6
99
44
25
8
21
1.80
1144--1214
27
2.6
27
86
6
90
47
23
5
22
1.72
5676--5745
24
2.8
25
87
6
90
44
24
8
22
1.81
5735--5800
27
2.4
27
90
7
98
46
22
7
22
1.77
5678--5803
24
4.9
24
75
12
83
46
24
7
22
1.77
17199--17277
27
2.9
27
90
1
113
30
30
13
25
1.94
17211--17716
28
18.1
27
84
6
131
30
30
16
22
1.96
17218--22374
56
91.6
56
79
8
4669
30
27
16
24
1.97
17304--22374
84
60.1
84
80
8
4878
30
27
16
24
1.97
17287--17727
28
15.8
27
84
7
517
30
29
17
22
1.97
17739--18158
28
15.0
28
84
4
526
30
29
15
24
1.96
18120--18197
39
2.0
39
92
0
129
26
28
21
23
1.99
18159--18588
28
15.4
28
82
5
487
30
28
16
24
1.97
18550--18627
39
2.0
39
92
0
129
26
28
21
23
1.99
18602--22391
28
135.5
28
81
6
3540
30
27
16
24
1.97
22532--22600
21
3.0
22
68
15
68
23
27
15
33
1.95
22507--22706
47
4.3
47
87
3
237
20
26
19
34
1.96
23409--23573
20
8.8
19
71
16
130
31
14
12
41
1.84
23398--23623
90
2.5
92
91
2
368
30
15
11
42
1.83
23582--23623
20
2.0
20
90
4
66
30
16
9
42
1.80
27261--27316
22
2.5
23
79
5
69
41
16
7
35
1.75

Tables:   1

The End!