Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1737
Parameters: 2 7 7 80 10 50 1000
Length:  38482

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6221--6278
9
6.0
10
72
20
52
31
0
0
68
0.89
6744--6876
20
6.9
19
74
21
84
54
0
0
44
1.05
6754--6809
23
2.6
23
88
8
73
60
0
1
37
1.07
6760--6809
11
4.6
11
75
22
52
62
0
0
38
0.96
6754--6843
20
4.2
20
83
11
92
56
0
1
42
1.06
6776--6847
14
5.3
14
73
9
60
56
0
0
43
0.99
6778--6893
20
5.6
22
73
21
83
54
0
0
45
0.99
7385--7416
15
2.1
15
94
0
55
25
3
0
71
1.00
7686--7752
29
2.4
28
78
14
75
56
1
1
40
1.17
7700--7739
19
2.2
18
90
4
62
62
0
2
35
1.09
8084--8134
18
2.9
17
85
8
66
64
0
0
35
0.94
9169--9244
40
1.9
39
82
10
93
50
0
1
48
1.09
10000--10041
22
1.9
22
90
9
68
61
0
0
38
0.96
10877--10921
7
6.1
7
80
10
54
42
0
0
57
0.98
11156--11221
31
2.1
31
88
5
98
42
3
0
54
1.15
11645--11703
21
2.9
20
82
9
66
20
8
1
69
1.23
11652--11708
19
2.9
19
81
5
60
22
7
1
68
1.23
12306--12394
13
5.9
13
71
27
61
34
12
17
34
1.88
12286--12415
32
4.0
32
96
1
233
34
11
17
36
1.86
12456--12480
13
1.9
13
100
0
50
32
16
16
36
1.90
15999--16037
21
1.9
21
84
5
53
43
0
0
56
0.99
15995--16038
16
2.8
15
86
6
52
45
0
0
54
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16367--16395
5
6.0
5
96
4
51
0
17
0
82
0.66
17117--17179
15
4.2
14
82
9
54
38
0
1
60
1.07
17923--17973
26
1.9
27
88
4
77
58
1
1
37
1.20
17922--17964
22
2.0
21
86
9
59
58
0
2
39
1.11
18348--18384
19
1.9
19
88
0
56
45
2
0
51
1.15
19284--19394
35
3.1
35
77
12
134
56
0
2
39
1.19
19282--19390
38
3.0
36
77
6
121
57
0
2
38
1.19
19363--19432
23
3.0
22
69
15
68
52
2
4
40
1.36
19418--19465
16
3.0
16
82
8
53
52
0
0
47
1.00
19418--19456
17
2.4
17
91
4
62
46
0
0
53
1.00
19910--19938
2
14.5
2
100
0
58
51
0
48
0
1.00
20550--20594
13
3.5
13
81
9
56
22
2
0
75
0.91
21758--21802
19
2.3
19
84
7
54
37
0
2
60
1.09
22273--22315
18
2.4
18
84
0
59
69
0
4
25
1.07
22428--22478
20
2.7
20
80
14
63
60
0
0
39
0.97
23936--24115
99
1.8
100
85
1
254
38
16
15
30
1.89
32978--33015
20
1.9
20
84
10
51
55
0
0
44
0.99
32956--33047
48
2.0
46
81
16
109
52
0
0
47
1.00
33168--33207
11
3.5
11
86
13
55
80
2
15
2
0.93
33319--33353
18
2.1
16
89
10
52
71
0
0
28
0.86
33703--33766
23
2.8
22
75
11
67
31
0
1
67
1.00
34068--34118
21
2.5
20
84
9
59
0
31
0
68
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35058--35092
15
2.3
15
90
0
52
42
0
2
54
1.15
35307--35357
22
2.2
22
79
6
57
64
0
1
33
1.05
36851--36887
19
2.0
19
89
5
58
37
5
0
56
1.22
37036--37088
25
2.3
23
76
20
56
54
0
1
43
1.11
37654--37695
14
2.9
15
75
7
50
42
4
0
52
1.22

Tables:   1

The End!