Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1738
Parameters: 2 7 7 80 10 50 1000
Length:  20326

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3481--3527
9
5.2
9
80
7
51
23
0
2
74
0.93
3460--3510
27
1.9
26
88
4
75
23
0
1
74
0.92
3469--3512
19
2.2
20
88
8
63
20
0
2
77
0.88
3460--3527
28
2.5
28
83
7
77
25
0
1
73
0.92
3481--3534
28
1.9
28
84
0
72
29
0
1
68
1.00
9310--9659
82
4.3
83
79
8
380
29
24
11
34
1.90
9341--9651
164
1.9
163
85
4
430
30
23
10
34
1.89
12337--12669
102
3.3
102
80
4
357
31
14
26
27
1.95
12374--12669
103
2.9
101
82
4
353
32
15
24
28
1.95
14122--14152
13
2.4
13
94
0
53
35
12
16
35
1.87
14197--14251
19
2.9
19
86
8
76
36
18
16
29
1.92
14236--14262
13
2.1
13
100
0
54
40
14
14
29
1.86
14806--14857
21
2.4
21
90
3
77
28
30
1
38
1.68

Tables:   1

The End!