Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1750
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 172274
ACGTcount: A:0.34, C:0.16, G:0.15, T:0.34
File 2 of 2
Found at i:110294 original size:94 final size:95
Alignment explanation
Indices: 109625--125708 Score: 3001
Period size: 95 Copynumber: 167.4 Consensus size: 95
109615 AGCCTACACG
* * ** * * *
109625 AGTTAGTGGCAACCATTTC-AAAGTCCACACGAGTTAATGGCAACTTTTTCAAAGTCCACATGAG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
* * * *
109689 TTGGGGGCAACCTTTTC-CAAGCCCACACA
66 TTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * *
109718 AGTTAGTGGCAGCCATTTC-AAAGTCCACGTGAGTTGGTGGCAATCTTTTCAAAAGACCACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-AG
* * * * **
109781 AGTTGTTGGCAGCCTTTTTAAAAGCCCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
109813 AGTT-GATGGCAACCTTTTC-AAAGTCTACACGAGTTGG-GGTAACCTTTTCAAATCCAACACGA
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGA
* * * ** **
109875 GTTTGTGGCAACCTTTT-TAAAGTCCGTACG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * *
109905 AG-TAG-GTGCTAACCTTTTAAAAAG-CCTAAACT-AGTTGGTGGTAACCTTTTCAATGTCCACA
1 AGTTAGTG-GC-AACCTTTTCAAAAGTCC-ACA-TGAGTTGGTGGCAACCTTTTCAAAGCCCACA
* * * **
109966 CGAGTTGGTGGCAAACTTTTCAAAA-GCTCATACG
62 AGAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * * *
110000 AGTTGGTGGTAACC-TTT-ATAAAGGCTTACACGAGTTGGTAGCAACCATTTT-AAAGTCCACAC
1 AGTTAGTGGCAACCTTTTCA-AAAGTC-CACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAA
** * * * *
110062 GAGTTAATAGCAGCC-TTTCAAAAGTCCATAAA
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * *
110094 AGTTGGTGTGTAA-CTATTTAAAAGCCCAAAAG-CCTACATGAGTTGGTGGCAACCATTTCAAAG
1 AGTTAGTG-GCAACCT-TTT-------CAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTCAAAG
* * * **
110157 TCCACAAGAGTTGGTGGTAACCTTTTCAAAAGTCTGCAAA
56 CCCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * *
110197 AGTTAGTGGCAACCTTTTC-AAAGTCCACATGAGTTGGTGACAACCTTTTTAAAGCCCATACA-A
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AGA
* *
110260 GTTGTTGGCAACCTTTTCAAAAGGCCACACA
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * ** * * * *
110291 AGTTGGTGGCAACCTTTTCAAAAGTCTACAAAAGTTAGTGGCAACCTTTTCAAAGTCTACACGAG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
* * * * * * *
110356 TTGGTGACAACCTTTT-TATAGTCTATACA
66 TTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * *
110385 AGTTATTGGCAACCTTTTTAAAAG-CCTATACGAGTTAGTGGCAACATTTTCAAAATCCCATATG
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* ** **
110449 AGTTGGAGGCAACC-TTTCAAAATCCCACATG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * * * ** *
110480 AGGTAGTAGCAATCTTTTCAAAAG-CCTACACAAGTTGGTGGTAAGCTTTGCAAATGGTCACAGG
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAG
* *
110544 AATTGGTGGCAACCTTTTCCAAA-GCC-CAAA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * ** *
110574 CGAGTT-GTCGGCAACCTTGT-AAAAG-CTGATAGGAGTTGGTGGGAACCTTTTCAAAAATCTAC
1 --AGTTAGT-GGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTC-AAAGCCCAC
* * *** **
110636 ATGAGTTGGTAGCAACCTTTTCAAAAATTCACACG
61 AAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * *
110671 AGTTGGTGGTAACTTTTTC-AAAGTCCACACGAGTTGATGGCAACC-TTTCAAAAGTCCATAAGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
** * * *
110734 GTTTATGGCAGCCTTTTCAAAAGCCCAAAAGCCTA
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAA----A
* * * *** *
110769 CACGAATTGGTGGCAACCATTTC-AAAGTCTACATGAGTTGGTGGCAACCTTTTCAAAAGTTTAG
1 -A-G--TTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCAC
*** **
110833 AAGAGTTGGTAATAACCTTTTCAAAA-GCTCACATG
61 AAGAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * ** * * * * *
110868 AGTTGGTGACAACCTTTT-TAAAGTCCACACAAGTTGTTGGTAACCTTTTCAAATGCTCGCACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAGA
* * * **
110932 GTTGTTGGCAACCCTTTCAAAA-TCCTACATG
65 GTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * * * *
110963 AGTTGGTGGTAACTTTTTCAAAA-TCCCACACGAGTTGGTTGCAACCTTTTAAAAGGCCCAC-AC
1 AGTTAGTGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAG
* * ** **
111026 AGTTAGTGGTAACCTTTTCAAAAATCCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * ***
111058 AGTTGGAGTCAACCTTTTTAAAAG-CTCACAAGAGTTGGTGGCAACCTTTTCAAATTTCACATA-
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
** ** * * *
111121 AGTTTTTGGC-ACCATAGTC-AAAGTCTA-ACA
64 AGTTGGTGGCAACC-TTTTCAAAAGGCCACAAA
** * * * * *
111151 TTTTCAGACGCTCACACATCTTGGTAGCAACCTTTCCAAAGTCTATAT-AGCTTGGTGGC-ACTA
1 AGTT-AG-TG-GCA-AC--CTT--T-TCAA-------A-AGTCCACATGAG-TTGGTGGCAAC--
** * * * * ** * * **
111214 CAGTT-GAAGTCCACTCA-AGTTGGTGGTAATATTTTCGAAAGCCCACATG
46 CTTTTCAAAGCCCAC-AAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
111263 AGTT-GTTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAGCCTTTTTAAAAGCCTACACG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAG
* ** * * * **
111327 AGTTGATGATAACATTTTTAAAAGCCCACACC
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * **
111359 AGTT-GATGGTAACCTTTTC-AATGTCCACATGAGTTGGTGGCAACCTTTTCAAAGAACACACA-
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* * * **
111421 AGTTAGTGGCAACCATTTC-AAAGTCCACATG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * *
111452 AGTTGGTGGCAATCTTTTCAAAAGCTTGCAC-T-AGTTGTTGGCAGCTTTTTTAAAAGCTCACAC
1 AGTTAGTGGCAACCTTTTCAAAAG--TCCACATGAGTTGGTGGCAAC-CTTTTCAAAGCCCACAA
* * * **
111515 GGGTTGATGGCAACCTTTTC-AAAGTCCACATG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * *
111547 AGTT-GGGGCAACCTTTTC-AAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAGTCCACACGAG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
* *
111610 TTGGTGGTAACATTTT-AAGAA-GCC-CAAA
66 TTGGTGGCAACCTTTTCAA-AAGGCCACAAA
* * * * * *
111638 CTAGTTGGTGGCAACCATTTC-AATGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCTCACAC
1 --AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* * * * * **
111702 GATTTGGTGGTAAACTTTT-TAAAGGCTTACACG
63 GAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * * * *
111735 AGTTGGTGGAAACCATTTCAAAA-TCCACACGAGTTGATAGAAACCTTTT-AGAAGTCCATAAGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCA-AAGCCCACAAGA
* **
111798 GTTGGTGGCAAACTTTTCAAAAGCCCAAAAGCCCACACG
65 GTTGGTGGCAACCTTTTCAAAAG-------G-CCACAAA
* * * ** * *
111837 AGTTGGTGGCAACCATTTC-AAAGTCCACACGAGTTGGTGTTAACCTTTTCAAAAGTCTACAA-A
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * *
111900 TATTCGTGGCAACCTTTTC-AAAGTCCACACA
65 -GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * ** * * *
111931 AGTT-GATGACAACCTTTTC-AAAGTCCATACAAGTTGTTGGCAACCTTTTCAAAATG-CCATAC
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAA-GCCCACAA
* * * * **
111993 GAGTTGGTGGTAACTTTTTCAAAA-TCTTACATG
63 GAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * * **
112026 AGTTGGTAGCAAACTTTTCAAAA-TCCCACAAGAGTTGGTAGG-AACATTTTCAAAAGTCTATGA
1 AGTTAGTGGCAACCTTTTCAAAAGT-CCACATGAGTTGGT-GGCAACCTTTTC-AAAGCCCACAA
** * * **
112089 GAGTTGGTCACAACCTTTTCAAAAGCCCATACG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* ** * ** * * **
112122 AGTTGGTGATAACTTTTTC-AAAGTCCACACAAATTGTTGGCAACCTTTTCAAAAGCTAACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-AG
* ** **
112185 AGTTGGTGGCAACCTTTTCAAAA-TCTTGCATG
64 AGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * *
112217 AGTTGGTGGTAACC-TTTCAAAA-TCCCACACGAGTTGGTAGCAACCTTTTCAAAAGCCTA-TAG
1 AGTTAGTGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * * * * **
112279 AAGTTGG-CGCTAAGCTTTGCAAATGGCCATACG
64 -AGTTGGTGGC-AACCTTTTCAAAAGGCCACAAA
* * * * ** ** ** *
112312 AGTTGGTGGCAACCTTTTCAAAAATCTACACGAGTTAATGGCAACAATTTCAAAGTTCACACGAG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
* * *
112377 TTGATTGCAACC-TTTCAAAAGTCCACAAGA
66 TTGGTGGCAACCTTTTCAAAAGGCCACAA-A
* * * * * * *
112407 A-TTGGTGGCAAGCTTTTAAAAAGCCCAATAGCTCACATGAATTTGTGGCAACCATTTCAAAGTC
1 AGTTAGTGGCAACCTTTTCAAAAG-----T--C-CACATGAGTTGGTGGCAACCTTTTCAAAGCC
* * * * *
112471 CACACGAGTTGGTGGCAACATTTTCAAAAGTCTACAAG
58 CACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * *
112509 AGTTGGTGGCAACCATTTT-AAAAG-CTCACAGGAGTTGGTGACAACCTTTTCAAAGTCCATACA
1 AGTTAGTGGCAACC-TTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-A
* * * *
112572 -AGTTGTTGGCAACCTTTT-TAAAGTCCACACA
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
112603 AGTT-GTTGACAACCCTTTCAAAA-TCTCACATGAGTTGGTGGCAACTTTTTTAAAATCCCACAC
1 AGTTAG-TGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAAC-CTTTTCAAAGCCCACAA
* * **
112666 GAATTGGTAGCAACCTTTTC-AAAGGCCCACACG
63 GAGTTGGTGGCAACCTTTTCAAAAGG-CCACAAA
* * * * * * * * *
112699 AGTTGGTGGTAACTTTTTCAAAAATCCACACGAGTTGGTGGCATCCTTTTTAAAAGCCCAGATGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAGA
**** **
112764 GTTGGTGGCAACCTTTTTC-AAATTTTACACG
65 GTTGGTGGCAACC-TTTTCAAAAGGCCACAAA
* * * * * * ** * * *
112795 AGTTTGTGGTAACATTTTCGAAAGCCCACACGAGTTATTGGTAACATTTTCAAAAG-CCACATGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * **
112859 GATGGTAGCAACCTTTTTAAAA-GCACACATG
65 GTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
*
112890 AGTT-GATGGCAACCTTTT-AAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCATACA-
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* * * * * *
112952 AGTTAGTGGAAACCATTTC-AAAGTCCGCATA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* ** * * *
112983 AGTTGGTGGCAATTTTTTCAAAAG-CCTGTAC-T-AGTTGTTGGCAGCCTTTTTAAATGCCCACA
1 AGTTAGTGGCAACCTTTTCAAAAGTCC---ACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACA
* ** * *
113045 AGGGTTGAAGGCAACCTTTTC-AAAGTCCACACA
62 AGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * **
113078 AGTTGGGGGTAACCTTTTC-AAAGCCCACACGAGTTGGTGGCAACCTTTTAAAAAGCCCAAAATT
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTT-CAAAGCCCACAAGA
* * *
113142 GTTAGG-GACAA-CTATTTC-AAAGTCCACACA
65 GTT-GGTGGCAACCT-TTTCAAAAGGCCACAAA
* * * *
113172 AGTT-GATAGCAACCCTTT-AAAAGTCCACAAGAGTTGGTGGCAAACTTTTCAAAAGCCTAAAAG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAG-C------
* * * * ** *
113235 CTCACATGAATTGGTGGTAACCATTTC-AAAGTTCACACGA
57 C-CACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACA-AA
* * * * * ** ** * *
113275 A-TTGGCGGTAACTTTTTCAAAAGTCTACAAAAGTTCATGGCAACCTTTTCAAAGTCCACACGAG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
* * * *
113339 TTGCTGGCAACCTTTTC-AAAGTCCATACA
66 TTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
113368 AGTT-GTTGGCAACCTTTTCAAAAGGCCACACGAGTTGGTGGTAACCTTTTCAAGATCTCACATG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAA-AGCCCACAAG
* * ** **
113432 AGTTGGTAGCAAACTTTTCAAAATCCCACATG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * *
113464 AGTT-GATAGAAAACTTTTCAAAA-TCCACACAATTTGTTGGCAACCTTTTCAAAGTCCAACATT
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAG-CC--CA--
* **
113527 TTCAGAAGTTCACATGAGTTGGTGGCAACCTTTTC-AAAGTCCACATG
60 --C--------A-A-GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * *
113574 AGTT-GATGGCAACGTTTTCAAAAGCCCACACGATTTGGTGGCAGCCTTTTTTAAAGCCCACATG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAG
* * * ** **
113638 AGTTGATGACAACCTTTT-TAAAGTTCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
113669 AGTTGGTGACAACCTTTTTAAAAGCCCAAAAGCCCACACGAGTTGGTAGCAAGCTTTTCAAAAGC
1 AGTTAGTGGCAACC-TTTT-------CAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGC
* * * *** * * * *
113734 CTACATGAGTTAGTAATAACATTTTC-AAAGTCAACACA
57 CCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * *
113772 CGTT-GTTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGTAACATTTTGAAAATCGCACACG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTT-CAAAGCCCACAAG
* * *
113836 AGTTGGTTGCAACCTTTTCAAAA-ACC-CATAG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACA-AA
* * * ** * * * **
113867 AGTTGGTGACAACCTCTTC-AAAGTCCACACAAGTTGTTAGAAACCTTTTCAAAAGCTTACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-AG
* * ***
113930 AGTTGGTGGCAACCTTTTTAAAA-TCTCACTCG
64 AGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * *
113962 AGTTGGTGGC-GCTCTTTTCAAAA-TCTAACATGAGTTGGTAGCAACCTTTTCAAAGGCCCACAC
1 AGTTAGTGGCAAC-CTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAA
* * * **
114025 GAGTTGGTGGTAACCATTTCAAAAGCCCACATG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
114058 AGTTGGTGGCAACCTTTGCAAAAGTCCACAGGAGTTGGTGGCAACATTTCCAAGAGCCCACAGGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAA-AGCCCACAAGA
* ** ***
114123 GTTGGTGGCAACCTTTAC-AAAGTTCACCCG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * ** * ** *
114153 AGTTTGTGGCACCCTAGTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAATCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * * **
114217 GTTGGTGGTAA-CTATTTC-ATAGTCTACACG
65 GTTGGTGGCAACCT-TTTCAAAAGGCCACAAA
* ** * * *
114247 AGTTCA-TGCCAA-CAGTTCAAAAGTCCACAGGAGTTGGTGGCAACTTTTTCAAAAGCCCAAAAG
1 AGTT-AGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * **
114310 CCCTTACGAATTGGTGGCAACCATTTC-AAAGTCCACACG
64 -----A-G--TTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * *
114349 AGTTGGTGGCAACCTTTTCAAAGGTCTAGAAGAATTGGTGGCAACCTTTTCAAAAGCCTAGACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * *
114414 GTTGGTGACAACCTTTTC-AAAGTCCACACA
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
114444 AGTT-GTTAGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGTAACCTTTTCAAAATCACACAC
1 AGTTAG-TGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* * *
114507 GAGTTGGTAGCAACCTTTGTCAAAA--CCA-TAG
63 GAGTTGGTGGCAACCTTT-TCAAAAGGCCACAAA
* * * * * ** * * * * *
114538 AGTTGGTGACAAACTTTTC-AAACTCTACACAAGTTGTTAG-AAGCTTTTTCAAAAGTCCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAA-CCTTTTC-AAAGCCCACAAG
* * * * * *
114601 AGTTAGTGACAACC-TTTCCAACGTCCACACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * ** * * **
114632 AGTTGGTGGCAGCTTTTTTAAAAGCCCACACAAGTTGGTGGCAA-CTTGTCCAAAATCCCACTCG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTT-TTC-AAAGCCCACAAG
* * * * * **
114696 ATTTGGTCGTAACCTTTTCAAAA-TCTGACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
** * * * * * *
114728 AG-TAGGTAACAACC-TTTC-AAAGACCCACACGAGTTGGTGGTAACCATTTCAAAAGCTCACAT
1 AGTTA-GTGGCAACCTTTTCAAAAG-TCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* **
114790 GAGTTGGTGGCAACCTTTGCAAAAGGCCACACG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * **
114823 AGTTGGTGACAACCTTTTCAAGAG-CTCATAGGAGTCGGTGACAACCTTTTCAAAAATCCACACA
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-A
* * * * * **
114887 -AGTTAGTTGTAA-C-TAT-AAAAGTCCACACG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * *
114916 AGTTAATGCCAACCTTTT-AAAAGTCCACAAGAGTTGGTGGCAACCTTTTCAAAAGCCCAAAAGC
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCC---A--
* * * * * * **
114980 CCACACGAATTAGTGACAACCATTTC-AAAGTCCATATG
60 -CA-A-GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * *
115018 GGTTGGTGACAACCTTTTCAAAAGTCTAGAAGAGTTGGTGGCAA-CTATTTCAAAATCCTACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCT-TTTC-AAAGCCCACAAG
* *
115082 AGTTGGTAGCAACCTTTTC-AAAGGCC-CATATG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACA-A-A
* * * * * * *
115114 AGTTGGTGGTAACCTTTTCAAAA-TCCCACATGAGTTGGTGGAAAACTTTTCAAAATCACACACG
1 AGTTAGTGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* *
115178 AGTTGGTGGCAACCTTTTCAAAA-TCCACACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * ** * * *
115209 AGTTTTTGGCAACCTTTTCCAAAG-CTCACGCGAGTTGGTAGCAACCTTTTCAAAGGTCCACATG
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAG
* * **
115273 AGTTGGTGGGAACCTTTTCAAAAGTCCACACT
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * * * ** * *
115305 AGTGGGTAGCAACC-TTTCCAAAGCCCACAAAAGTTGTTGGCAACCTTTTCAAAAG-CCACATGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * **
115368 GTT-GTGACATCC-TTTCAAAA-TCCTACATG
65 GTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * ** * * *
115397 AGTTGGTAGCAACCTTTTCAAAAG-CCTGCACGAGTTGGTGTTAAGCTTTGCAAATGGCCACACA
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACA-A
*
115461 -AGTTGGTGGCAACTTTTTC-AAA-GCC-CAAA
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** *
115490 TGAGTT-GTTGGTAACCTTTTCAAAAG-CTGACAGGAGTTGGTGGCAACCTTTTCAAAAATCTAC
1 --AGTTAG-TGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTC-AAAGCCCAC
* * * *** **
115553 ACGAGTTGGTAGCAACTTTTTCAAAAATTCACATG
61 AAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * ** ** *
115588 TGTTGGTGGCAA-CTATTT-TAAAGTCCACACGTGTTGCTAGAAACC-TTTCAAAAATCCGTAAA
1 AGTTAGTGGCAACCT-TTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* *
115650 AGTTGCTGGCAACCATTTTAATAGCCCAAAAGTCCACACAA
64 AGTTGGTGGCAACC--TTT--T----CAAAAGGCCACA-AA
* * * * * * * * *
115691 A-TTGGTAGCAACCATTTC-AAAGCCCACATGAGTTGGTGGTAACTTTTTCAAAAGTCTACAATA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * **
115754 GTTGGTGGCAAACTTTTCAAAAGTCCACATG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * * * * *
115785 AGTTAGCAGCAACC-TTT----AG-CTCACACT-AGTTAGCGGTAA-CTTTTGGAGAAACCCACA
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACA-TGAGTTGGTGGCAACCTTTT-CA-AAGCCCACA
* * * * **
115842 CGAGTTGGTGGTAACCTTTTTAAAAGCCCACAGG
62 AGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * * ** * * * *
115876 AGTTAGTGGTTACCTTTTC-AAAGTTCACACGAGGTT-GTGGC-ACCATAGTCAAAGTCTATACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGA-GTTGGTGGCAACC-TTTTCAAAGCCCACAAG
* * * **
115938 AGTTGGTAGTAACTTTTTCAAAA-GCCTACACT
64 AGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * * * * * *
115970 TGTTGGTAGTAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCATTTCAAAGTCCACACGAG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
* * * *
116035 TTGATGGCAACC-TTTCAAAAGTCTACAAG
66 TTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * ** * *
116064 AGTTGGTGGCAACTTTTTTAAAAGCCCAAAAGCCCACAAGATTTGGAAGCAA-CTATTTCAATGT
1 AGTTAGTGGCAAC-CTTTT-------CAAAAGTCCACATGAGTTGGTGGCAACCT-TTTCAAAGC
* * * * * *
116128 CCACACGAGTTGGTGGTAACCTTTTGAAAAGTCTACAAG
57 CCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * ** * *
116167 AGCTAGGGGCAACTTTTTCAAAAGCCCACACGAGTTGGTAACAACCTCTTT-AAAGTCTACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCT-TTTCAAAGCCCACA-AG
* * * **
116230 AGTTGTTGGCAACCTTTTTTTAAAAAGCCCACACG
64 AGTTGGTGGCAACC---TTTTCAAAAGGCCACAAA
** * * * *
116265 AGTTAGTAACAACCTTTTC-AAAGTCAACAT-ATGTTGTTAGCAACCTTTTCAAAAGCCCACATG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGA-GTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * * * **
116328 AGTTGGTAGTAACTTTTTCAAAA-TCACACATG
64 AGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * *
116360 AGTTGGTAGCAACCTTTTCAAAAAG--CACA-GAGTTGGTGACAACCTTTCCAAAATCCTACTCA
1 AGTTAGTGGCAACCTTTTC-AAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCAC-AA
* * **** **
116422 -AGTTGGTCGCAACATTTTCAAAATTTGACATG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * ** * * *
116454 AGTTGGTAGCAACC-TTTCAAAGGCCCACACAAGTTGGTGGTAACCATTTCAAAAGCCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * * **
116518 GTTAGTGGTAACCATTTCAAAAGCCCACATG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
116549 GGTTGGTGGCAACCTTTT-AAAGAG-CTCACAAGAGTTGGTGGCAACCTTTTCAAGAGCTCATAG
1 AGTTAGTGGCAACCTTTTCAAA-AGTC-CACATGAGTTGGTGGCAACCTTTTCAA-AGCCCACAA
** **
116612 GAGTTGGTGGCAACCTTTTCAAAAATCCACATG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * *
116645 TGTTAGTGGTAA-CTATTTC-AAAGTCTACACT-AGTTAAT-GCTAACC-TTTCAAAAGTCCATA
1 AGTTAGTGGCAACCT-TTTCAAAAGTCCACA-TGAGTTGGTGGC-AACCTTTTC-AAAGCCCACA
* * * *
116705 ATAGTTGGTGGTAACCTTTTCAAAA-GCCTACGAG
62 AGAGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * *
116739 AGTTGGTCGTAACCTTTTCAAAAGCCTACTTAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAA
1 AGTTAGTGGCAACCTTTT-------C-A---AAAGTCCACATGAGTTGGTGGCAACCTTTTC-AA
* * * ** **
116804 AACTCACATA-AGTTGGTGGAAACCTTTTCAAAATCCCACATG
54 AGCCCACA-AGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * *
116846 AGTT-GATAGCAACCCTTTCAAAAGTTCACACGAGTTGCTGACAACCCTTTCAAAGTCCACATA-
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* * ** * * *
116909 AGTTGTTTGCAATATTTTC-AGATGCCTACACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * * * * * * *
116941 AGTTGGTGGTAATCTTTTC-AATG-CCTACACGAGTTGTTGGCAACCTTTTTAAAATCTCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAG
* * * **
117004 AGTTGGTGGTAACCTTTTTAAAA-GCTCGCATG
64 AGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * ** * *
117036 AGTTAGTGGTAACCTTTTC-CAAGTTCACACGAGTTTGTGGC-ACCATAGTCAAAGTCTACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACA-AG
* * * * *
117098 AGTTGGTAGTAACTTTTTTAAAA-GCCTACATA
64 AGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * * * * *
117130 TGCT-GCTGGTAACCTTTTCAAAAG-CCACACGAGTTGGTGACAACCATTTCAAAGTCCACACGA
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGA
* * * *
117193 GTTGATGGCAACC-TTTCAAAAGTCTACAAG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * * *
117223 AGTTTGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGAAGCAA-CTATTTTAATGT
1 AGTTAGTGGCAACCTTTT--------CAAAAGTCCACATGAGTTGGTGGCAACCT-TTTCAAAGC
* * * * * *
117287 CCATACGAGTTGGTGGCAACCTTTTGAAAAGTCTACAAG
57 CCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * ** * *
117326 AGTTAG-GGTCCATCTTTTCAAAAGCCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACA-
1 AGTTAGTGG-CAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* * * **
117389 AGTTGTTGGCAACCTTTTTTTAAAAAGCCCACATG
64 AGTTGGTGGCAACC---TTTTCAAAAGGCCACAAA
*** * * * * * *
117424 AGTTAGTAATAACCTTTTC-AAAGTCAACATAAGTTGTTAGCAACCTTTTCAAAAGTCCACATGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * **
117488 GTTGGTAGTAACCTTTTCAAAA-TCACACACG
65 GTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * **
117519 AGTTGGTAGCAACCTTTTCAAAA-ACCACA-GAGTTGGTGACAACCTTTTCAAA-CTTTACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGC-CCACA-AG
* *** * * **
117580 AGTTGTTAAAAACTTTTTCAAAAGTCCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * *
117612 AGTTAATGACAACCTTTTC-AATGTCCACATAACTTGTTGGCAACCTTTTCAAAAACCCACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-AG
* * ** ***
117675 AGTTGGTGGCAACCATTCCAAAATCCCACTCG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
117707 AGTTGGTCGCAACCTTTTCAAAA-TCTAACACGAGTTGGTAGCAACC-TTTCAAAGGCCCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAG
* ** **
117770 AGTTGGTGGTAA-CTATTTCAAAATCCCACATG
64 AGTTGGTGGCAACCT-TTTCAAAAGGCCACAAA
* * * * * * *
117802 AGTTGGTGGCAACCTTTGCCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGTCTAAAAGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * **
117867 GTTGGTGGCAATCATTTCAAAA-GCTCATACG
65 GTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * ** * * * *
117898 AGTTAGTAGCAACCTTTTCAAAGGCCCACATGAGTCAGTGGGAATCTTTTCAAAAGTCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * **
117963 GTTGGTAGCAACATTTTC-AAAGCCCACATG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * * *
117993 AGTT-GTTGGCAACCTTTTCAAAAG-CCTACATGAGTTGGTAACAACC-TTTCAAAATCCTACAC
1 AGTTAG-TGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* **
118055 GAGTTGGTAGCAACCTTTTCAAAA-GCCTACACG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * * ** **
118088 AGTTGGTGGTAAGCTTTGT-AAATGGCCACACAAGTTGGTGGCAAATTTTTCAAAGCCCA-AATG
1 AGTTAGTGGCAACCTTT-TCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAA-G
** * **
118151 AGTTATTGGCAACCTTTTCAAAA-CCCGACAGG
64 AGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* ** * * * *** *
118183 AGTTGGTGGTTACCTTTTCAAAAATCCACACGAGTTGGTGGGAACCTTTTCAAAAATTCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * **
118248 GTTGGTGGTAA-CTATTTC-AAAGTCCACATG
65 GTTGGTGGCAACCT-TTTCAAAAGGCCACAAA
* * * **
118278 AGTT-GATAGCAACC-TTTCAAAAGTCTATAAAAGTTGGTGGCAACCTTTTTAATAGCCCAAAAG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC--TTT--T----C-AAAG
* * * * **
118341 CCCACACA-AATTGGTGGTAACCATTTC-AAAGCCCACACG
56 CCCACA-AGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * * ** * * * **
118380 AGTT-GATGATAACTTTTTTAAAAGTCTTCAAGAGTTGGTAGCAACTTTTTCAAAAGCCCACGTG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
** * **
118444 AGTTAGG-ACCAACCTTTTCAAAA-TCTCACATG
64 AGTT-GGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * *
118476 AG-TAGATGGCAACATTTTTAAAA-TCCCATATGAGTTGGTAGCAACCTTTTCAAAGGCTCACAT
1 AGTTAG-TGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAA
* * * * * **
118539 GAGTTGGCGGTAACCTTTTCAGAAGTCCATATG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* ** * * * * * **
118572 AGTTGGTGATAACATTTTC-AAAG-CCACACGAGTTGTTGTCAACCTTTTCAAAAGCCTACGTGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * *
118635 GTTGGTGGAAACTTTTTCAACTA--CCTACACA
65 GTTGGTGGCAACCTTTTCAA-AAGGCC-ACAAA
* ** * * * * *** *
118666 AGTTGGTGGCAACCTTTTC-AAAGTGTACACGAGTTAGTGGTAACCTTTTAAAAGGTTGACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAGA
* * * * **
118730 GTTGGTGGTAATCATTTC-AAAGTCCACACG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * *
118760 AGTT-GATAGCAACCTTTCAAAACCCCAAAAG-CCTACACGAGTTGGTGGTAACCTTTTCAAAAG
1 AGTTAG-TGGCAACCTTT-------TCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTC-AAAG
* * * ** * **
118823 TCTACGAGAGTTGGTCACAACCTTTTCAAAAGCCCACACG
56 CCCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * * ** * * *
118863 AGTT-GATAACAACCTTTT-TAAAGTCCACATAAGTTATTGGCAACCTTTCCAAAAGCTCATACA
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-A
* * * **
118926 -AGTTAGTGGCAACCTTTTCAAAA-TCTACATG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * *
118957 AGTTGGTAGCAACCTTTTCAAAAG-CTCACAGGAGTTGGTGACAACCTTTTCAAAGTCCACATA-
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* * * **
119020 AGTTGTTGGCAACATTTTCAAAAGTCCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * *
119052 AGTTGGTGGCAACCTTTTC-AAAG-CCTACACGAGTTGTTGACAACCTTTTTAAAAGCTCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAG
* * *
119115 AGTTGGTGGTAA-CTTTTACAAAAAGCCACACA
64 AGTTGGTGGCAACCTTTT-CAAAAGGCCACAAA
* * * * * ** * * ** * *
119147 AGTTAGTGGTAACCTTTTTAAAAGCCCATAGGAGTTACTGGTAACCTTTTCAATGTTCACACGGG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
* ** * * **
119212 TTTGTGGC-ACCATAGTC-AAAGTCTACATG
66 TTGGTGGCAACC-TTTTCAAAAGGCCACAAA
* * * * * * * * *
119241 AGTTGGTAGTAACTTTTTCAAAAG-CCTACACGTGTTGATGGTAACCTTTTCAAAAGCCCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * * * *
119305 AGTTGGTGGCAACCATTT-GAATGTCCACATA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * ** *
119336 AGTT-GATGGCAACC-TTTCAAAAGTCTACAAGAGTCAGTGGCATCCATTTTAAAAGCCCAAAAG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTT-------C-AAAG
* ** * * * * **
119399 CCCATAAGAGTTGGAAGCCA-CTATTTC-AATGTCTACATG
56 CCCACAAGAGTTGGTGGCAACCT-TTTCAAAAGGCCACAAA
* * * * * * * *
119438 AGTTGGTGACAACCTTTTGAAAAGTCTACAAGAGTTGGTAGTAACCTTTTCAAAAGCCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
*** * * *
119503 GTTGGTAATAACCTTTTC-AAAGTCTACACA
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * * * *
119533 AGTT-GTTGGCAACCTTTTCAAAAGCTCACACA--AGTTGGTGATAACTTTTTCAAAATCTCGCA
1 AGTTAG-TGGCAACCTTTTCAAAAG-TC-CACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA
* * * * * *
119595 TGAATTAGAGGTAACCTTTTCAAAA--TCACATACA
62 AGAGTTGGTGGCAACCTTTTCAAAAGGCCACA-A-A
* * * * ** ** * * *
119629 TGTTGGTAGCAACCTTTTCAAAGGCCTCCAC--GAGTTTATGATAACCTTTTCGATAGTCCACAC
1 AGTTAGTGGCAACCTTTTCAAAAG--TCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* * ***
119692 GAGTTGGTGGCAACCTTTTC-GAAGCCCACGTG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
119724 AGTT-GTTGGCAACCTTATAAAAAGTCTACATGAGTTGGTAGCAACCTTTTCAAAAACCCACATG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * * **
119788 AGTTGGTAGCAACCTTTTCAAAACTG-TACATG
64 AGTTGGTGGCAACCTTTTCAAAA-GGCCACAAA
*** * ** *
119820 AGTTAGTGGCAA-CTATTTC-AAAGTCTGTAAGAGTTGACGGCAACC-TTTCAAAGTCCACAAGA
1 AGTTAGTGGCAACCT-TTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGA
* *
119882 GTTGGTGACAACCTTTTCAAAA-GCCTAAAAACCCA
65 GTTGGTGGCAACCTTTTCAAAAGGCC--ACAA---A
* * * * * * * * ***
119917 CACGAATTGGTGACAACCATTTT--GAAGTCTACACGAGTTAGTGGTAACCTTTTTAAAATTGCA
1 -A-G--TTAGTGGCAACC-TTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCA
* * ***
119980 CAATAGTTGGTGGCAACCTTTTCAAAAGCCCACCCG
60 CAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * *
120016 AGTTGGTGACAACCTTTTC-AAAGT-CA-A-CA-TTGTTGGCAACATTTTCAAAAGCCCA-AATG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA-G
* ** **
120075 AGTTGGTGGTAACCTTTTCAAAATCCCACATG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * *
120107 AGTTGGTGGTAACTTTTTCAAAA-TCTTAAACGAATTGGTAGCAACCTTTTCAAAGGCCCACATG
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAG
*** * ** * **
120171 AGTTGGTTATAACATTTTCAAAATTCTACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * *
120203 AGTT-GTTGGCAACCTTTTTAAAAG-CTCGCATG-GTTTGGTGGTAACCTTTTCAAA-CTTCACA
1 AGTTAG-TGGCAACCTTTTCAAAAGTC-CACATGAG-TTGGTGGCAACCTTTTCAAAGC-CCACA
* * * ** * *
120264 CGCGTTTGTGGC-ACCATAGTC-AAAGTCCA-ACA
62 AGAGTTGGTGGCAACC-TTTTCAAAAGGCCACAAA
** *** * * ** * * * * *
120296 TTTTCAAAAGCTCACACTAGTT-GGATG-GCATCAT---TT--TTG-AA-GTTTATAAAAGTTAG
1 AGTT-AGTGGC-AAC-CT-TTTCAAAAGTCCA-CATGAGTTGGTGGCAACCTTT-T-CAA---AG
** * * ** * * * *** **
120352 TGGCACCATAGTCAAAGT-CCACACGAGTTAGTGGCAACATTTTCAAAAGCCCACATG
56 -CCCACAAGAGT--TGGTGGCA-AC--CTT--T-TC-A-A-----AAGGC--CACAAA
* * * * * * ** ** * *
120409 AGTTGGTAGCAGCCTTATT-TAAAGCCCACACGTCTTAATGGCAACCTTTTCAAGGTCCACACA-
1 AGTTAGTGGCAACCTT-TTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* * *
120472 TGTTGGTGGCAACCTTCTCAAAA-GCC-TAAA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * **
120502 AGCCTACACGAGTTGGCAGTAACCTTTTCAAAAGCTGTCGC--GAGTTAGTAACAACCTTTTCAA
1 AG--T----TAG-TGGC---AACCTTTTCAAAAG-T-CCACATGAGTTGGTGGCAACCTTTTCAA
* * * * **
120565 AGTCAACATA-AGTTGTTGGCAACC-TTTC-GAAGGTCCACATG
54 AGCCCACA-AGAGTTGGTGGCAACCTTTTCAAAAGG-CCACAAA
* * * * *
120606 AGTTGGTGGCAACCTTTTCAAAA-TAACACATGAGTTGGTAGCAATCTTTTCAAAAACCCAC-AG
1 AGTTAGTGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * * * * *
120669 TGTTGGTGACAACTTTTTC-AAAGTCTACACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * ** *
120700 AGTT-GTTGGAAACATTTTCAAAAGCCCACACGGGTTGATGACAACTTTTTCAAAATCCATACA-
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* **
120763 AGTTGTTGGCAACCTTTTCAAAA-GCTCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * * * *
120795 AGTTTGTGACAACCCTTTT-AAAA-TCTCACTTGAGTTGGTAGC-ACCTTCTCAAAATCTCAGAT
1 AGTTAGTGGCAA-CCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* **
120857 GAGTTGGTGGTAACCTTTTCAAAA-GCGCACACG
63 GAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * *
120890 AGTTGGTGGC-ACCTTTTGCAAAAGTGCACATGTGTTGGTGGC-ACGATTTTCAAAGCCCA-AAC
1 AGTTAGTGGCAACCTTTT-CAAAAGTCCACATGAGTTGGTGGCAAC-CTTTTCAAAGCCCACAA-
* * **
120952 GAGTTGTTGGCAACCTTTTCAAAAGCCCACAGG
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * ** * ** * * *
120985 AGTTGGTGGCAACCTTTAC-AAAGTTCACACGAGTTTATAGC-ACCATAGTCAAAGTCTACATGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAGA
* ** * * **
121048 GTTGGAT-GTAATATTTTCAAAAGCCCATATG
65 GTTGG-TGGCAACCTTTTCAAAAGGCCACAAA
* * * * ** * ** *
121079 AGTT-GCTGGTAACCTTTT-TAAAGTCTATACAAGTGTGGCGGC-ACCATAGTCAAAGTCCA-AA
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGT-TGGTGGCAACC-TTTTCAAAGCCCACAA
* ***** * **
121140 CAGGTTGGTGGCAAAAAAGTC-AAAGTCCACACG
63 GA-GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * ** *
121173 AGTTGGTGGTAACATTTTCAATA--CGACATGAGTTGGTAGCAACCTTTTCAAAAGCAGACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * ** * * *
121236 GTTTGTCGCTGCTCTTTT-TAAAGCCCACATA
65 GTTGGTGGCAAC-CTTTTCAAAAGGCCACAAA
* ** *
121267 AGTTAATATCAACCTTTTC-AAAGTCCACATGAGATGGTGGCAACCTTTTCAAAAGTCTAAAAGC
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTT------TC--AAAGC
* **** **
121331 CCACACA-AGTTGGTGGTAA-CTATTTC-AAAGTTTTCACG
57 CCACA-AGAGTTGGTGGCAACCT-TTTCAAAAGGCCACAAA
* * * * *
121369 AG-TAGGTGGCAACATTTTCAAAAGTCTACGA-GAGTTGGTCGCAACCTTTTCAAAAGCTCACAT
1 AGTTA-GTGGCAACCTTTTCAAAAGTCCAC-ATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* * *
121432 GAGTTGGTGACAACCTTTTCAAAA-TCCACATA
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
** * *
121464 AGTT-GTTGGCAACCACTTCAAAAGCTCACACA--AGATGGTGGCAACCTTTTCAAAATCCCACA
1 AGTTAG-TGGCAACCTTTTCAAAAG-TC-CACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA
* * * **
121526 TGAGTTGGTAGCAACCTCTTCAAAA-GCTCACACG
62 AGAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
** * * ** * * * *
121560 AGTT-GCTAACAACCCTTTC-AAAGTCCGCACAAGTTGTTGGCAACATTTTCAGAAGTCCACACG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCA-AAGCCCACAAG
* **
121623 AGTTGGTGGCAACCTTTTC--AATGCCTACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * *
121654 AGTT-GTTGGCAACCATTTT-AAAA-TCTCACATGAGTTGGTGGTAA-CTTTTACAGAAACCAAC
1 AGTTAG-TGGCAACC-TTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTT-CA-AAGCCCAC
* * * **
121715 ACGAGTTGGTGGTAACCTTTTTAAAA-GCTCACATG
61 AAGAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * ** * * *
121750 AGTTAGTGGTAACCTTTTC-AAAGTTCACACGAGTTTGTGGC-ACCATAGTCAAAGTCTACAGGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAGA
* * * * **
121813 GTTGGTAGTAACTTTTTCAAAA-GCGTACATG
65 GTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * * * * * *
121844 TGCTGGTAGTAACCTTTTCAAAAG-CCTACATGAGTTTGCGGCAACCATGTCAAAGTCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGA
* *** *
121908 GTTGATGGCAACC-TTTCAAAAGTTTACAAG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * * *
121938 AGTTGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGAAGTAA-CTATTTCAATGT
1 AGTTAGTGGCAACCTTTT--------CAAAAGTCCACATGAGTTGGTGGCAACCT-TTTCAAAGC
* * * * * *
122002 CCATACGAGTTGGTGGCAACCTTTTGAAAAGTCTACAAG
57 CCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* ** * *
122041 AGTTAG-GGACAACCTTTTCAAAAGCCCACATGAGTTGGTAACAACCTTTTCAAAGTCTACACA-
1 AGTTAGTGG-CAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
* * * * * **
122104 AGTAGTTGGCAACTTTTTTTTTAAAAAGCCCACACG
64 AGTTGGTGGCAAC----CTTTTCAAAAGGCCACAAA
** * * * *
122140 AGTTAGTAACAACCTTTTC-AAAGTCAACATAAGTTGTTAGCAACCTTTTCAAAAGCCCACATA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-AG
* * * *
122203 AGTTGGTAGTAACTTTTTCAAAA--TCACATACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACA-A-A
* * * * *
122235 AGTTGGTAGCAACCTTTTCAAAA-ACCACA-GAGTTAGTGACAACCTTTTCAAA-CTCCACATA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGC-CCACA-AG
** * * * * * *
122296 AGTTATTAGAAACTTTTTTAAAAGTCCACACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * * *
122328 AGTTAATGACAACCTTTTC-AATGTCCACACAACTTGTTGGCAACCTTTTCAAAAACCCACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACA-AG
* * ** ***
122391 AGTTGGTGGTAACCTTTCCAAAATCCCACTCG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * * * * * *
122423 AG-TCG-GTC--GC---TCAAAA-TCCTATACGAGTAGGTAGTAA-CATTTGAAAGGCTCATACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAG
* * *
122479 AGTTGGTGGTAACCATTTCAAAA-GCC-CAATG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAA-A
* * * * * * *
122510 GGTTAGTGGCAACCTTTGCAAAAGTCCACACGAGTTGGTGGCAACCTCTTCAAGAGCTCATAGGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAA-AGCCCACAAGA
* ** * **
122575 GTTGGTGGCAACCTTTTGAAAAATCTACACG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* ** * *
122606 TGTTAGT-GCTAA-CTATTTC-AAAGTCCACACT-AGTTAATGCCAACC-TTTCAAAAGTCCACA
1 AGTTAGTGGC-AACCT-TTTCAAAAGTCCACA-TGAGTTGGTGGCAACCTTTTC-AAAGCCCACA
* * *
122666 AGAGTTGGTGGCAACTTTTTCAAAAGCCCAAAAGCCCA
62 AGAGTTGGTGGCAACCTTTTCAAAAGGCCACAA----A
* * * * * *
122704 CACGAATTAGTGGAAACCATTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGTCTAG
1 -A-G--TTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCAC
* * **
122768 AAGAGTTGGTGGCAATCATTTCAAAA-GCTCACATG
61 AAGAGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * *
122803 AGTTGGTAGCAACCTTTTC-AAAGGCCGACATGAGTCGGTGGGAACCTTTTCAAAAGTCCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCC-ACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * **
122867 AGTTGGTAGCAACCTTTTC-AAAGCCCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * ** *
122898 AGTTATTGGCAACCTTTTTAAAAG-CTCACATGAGTTGGTGACGACC-TTTCAAAATCCTGCACG
1 AGTTAGTGGCAACCTTTTCAAAAGTC-CACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * *
122961 AGTTGGTAGCAACCTTTTTAAAA-GCCTACACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCC-ACAAA
* * * * * * ** ** * *
122993 TGTTGGTGGTAAGCTTTGCAAATGGGCACACAAGTTGGTGACAACTTTTTCAAAGCCCA-AATGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAA-GA
* * **
123057 GTTGTTGGCAACCTTTTCAAAA-GCTGACAGG
65 GTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * ** ***
123088 AGTTGGTGGTAACCTTTTCAAAAATCCAGACGAGTTGGCAAG-AACCTTTTCAAAAATTCACACA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGG-TGGCAACCTTTTC-AAAGCCCACA-A
*
123152 -AGTTGGTGGCAA-CTATTTC-AAAGTG-CACATGA
63 GAGTTGGTGGCAACCT-TTTCAAAAG-GCCACA-AA
* *** ** *
123184 A-TT-GATAGCAACC-TTTCAAAAGTCTGTAAAAGTTGGTAGCAACCTTTTCAATAGTCCAAAAG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC--TT---T--T-C-AAAG
* * * * * **
123246 CCCACACA-AATTTGTGGTAACCATTTC-AAAGCCCACACG
56 CCCACA-AGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * *
123285 AGTT-GATGGCAACTTTTTCAAAAGTCTATAAGAGTTGGTAGCAA---TGTCAAAAGCCCACACG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* ** * **
123346 AGTTAGCAGCAACCTTTTCAAAA-TCTCACATG
64 AGTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * * ** *
123378 AGTT-GATGGAAACATTTTTAATA-TCCCATATAAGTTCGTAACAACCTTTTCAAAAG-CCACAC
1 AGTTAG-TGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAA
* * * **
123440 GAGTTGGTGGTAACCTTTT-AAGAAGTCCATACG
63 GAGTTGGTGGCAACCTTTTCAA-AAGGCCACAAA
* ** * * * * * * * * **
123473 AGTTGGTGATAACCTTCTC-AGAG-CCACACGAGTTGTTGTCAACATTTTTAAAAGCCTACGTGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAAC-CTTTTCAAAGCCCACAAGA
* * ** * **
123536 GTTGGTGGTAACTTTTTCATTTA--CATACACG
65 GTTGGTGGCAACCTTTTCA-AAAGGC-CACAAA
* * * * * *
123567 AGTTGGTGGCAACCTTTTC-AAAGTCTACAAGAGTTGGTGGTAACCTTTTAAAAGGCCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAA-GCCCACAAGA
* * * * * **
123631 GTTGGTGGTAATC-ATTCCAAAGTCCACACG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
123661 AGTT-GATAGCAACCTTTCAAAAGCCCAAAAGCCCACACGAGTTGATAGCAACCTTTTAAAAGCC
1 AGTTAG-TGGCAACCTTT-------TCAAAAGTCCACATGAGTTGGTGGCAACCTTTT-------
* * * * *
123725 CAAAAGCCCACACGAGTTGGTAGCAACCTTTTCAAAAGTCTACGAGA
51 C-AAAGCCCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCAC-AAA
* * * * * * *
123772 A-TTGGTCGCAACCTTTTCAAAAATCCACATGAATTGGTGACAACCTTTT-TAAGTCCACATA-A
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AGA
* *
123834 GTT-GTCAGCAACCTTTTCAAAA-GCTCACACA
65 GTTGGT-GGCAACCTTTTCAAAAGGC-CACAAA
* * ** *
123865 AGTTGGTGGCAACCTTTTCAAAA-TCCCACATGAGTTGGTAGCAACCTTTTCAAAAGCTTACAGG
1 AGTTAGTGGCAACCTTTTCAAAAGT-CCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * * *
123929 AGATGGTGACAACCTTTTC-AAAGTCCACACA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * ** *
123960 AGTT-GTTGGCAACATTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTGCAAAGCCTGCATGA
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGA
* * **
124024 GTTGTTGGCAACCTTTTTAAAA-GCTCACACG
65 GTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * *
124055 AGTTGGTGGTAA-CTTTTACAGAAAGT-CACATGAGTTGGTGGTAACCTTTGT-AGAAGCCCATA
1 AGTTAGTGGCAACCTTTT-CA-AAAGTCCACATGAGTTGGTGGCAACCTTT-TCA-AAGCCCACA
* ** * * ** **
124117 GGAGTTATTGGTAATCTTTTC-AAAGTTCACACG
62 AGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* ** ** * * * * * * *
124150 AGTTTGCAGC-ACCATAGTC-AAAGTCTACA-GAGTTGGTAGTAACTTTTTCAAAAACCTACACG
1 AGTTAGTGGCAACC-TTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAG
* * * * * **
124212 TGCTGGTGGTAACTTTTTCAAAAGCCCACATG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
124244 AGTTGGTGGCAACCATTT-GAAAGTCCACATGAGTTGATGGCAACC-TTTCAAAAGTCTACAAGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
*
124307 GTTGGTGGCAGCCTTTTCAAAA-GCC-CAAA
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
124336 AGCCCATAAAAGTTGG-AAGTTACTATTTCAATA-TCCACACGAGTTGGTGGTAACCTTTTGAAA
1 AG----T--TAG-TGGCAA---CCT-TTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTT-CAA
* * * * * * **
124399 AGTCTACAAGAGTTGGTAGTAACCTTTACAAAAGTCCACACG
54 AGCCCACAAGAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* ** * ** * *
124441 AGTTGGTAACAACCTTTTC-AAAGTCTACACAAGTTGTTGGCAACCTTTTCAAAAGCCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
** * * * * **
124505 GTTGGTGATAACTTTTTCAATA-TCTCGCATT
65 GTTGGTGGCAACCTTTTCAAAAGGC-CACAAA
* * * * * * * *
124536 AGTTGGTGGTAACCTTTTCAAAA-T-CACATACATGTTGGTAGAAACCTTTTCAAAGGCCTATAT
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACAT-GA-GTTGGTGGCAACCTTTTCAAA-GCCCACAA
* ** * ** *
124599 GAGTTTGTGATAACCTTTTCAATAGTTCACACA
63 GAGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * ** * *
124632 AGTTGGTGGCAGCCTTTTC-AAAGCCCACGCGAGTTGTTGGCAACCTTATAAAAAGTCCACACGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTT-TTCAAAGCCCACAAGA
** * **
124696 GTTGGTGGCAACCTTTTCAAAAATCCATATG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * *
124727 AGTTGGTAGCAACCTTTTCAAAACTCTACATGAGTTGGTGGCAA-CTATTTCAAAGTCCACACA-
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCT-TTTCAAAGCCCACA-AG
* ** * **
124790 AGTTGTTGGCAATATTTTCAAAAGTCCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * *
124822 AGTTGGTGGCAACCTTTTC-AAAGTCCACATAAGTTGTTGGCAACCATTTTAAAAGCTCA-AACA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAA-G
* ** **
124885 AGTTGTTGGCAA-CTTTTACAAAAACCCACACG
64 AGTTGGTGGCAACCTTTT-CAAAAGGCCACAAA
* ** * * * ** *
124917 AGTTGGTGATAACCTTTTTAAAAG-CC-CATTCGAGTTAGTGGTAACCTTTTCAAAGTTCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACA-T-GAGTTGGTGGCAACCTTTTCAAAGCCCACAAG
* * ** * * *
124980 AGTTTGTGG-TACCATAATC-AAAGTCTACACA
64 AGTTGGTGGCAACC-TTTTCAAAAGGCCACAAA
* * * ** * * *
125011 AGTTAGTGGTAACGTTTTTAAAAGTTGACAGGAGTTGATGGCAACCATTTCAAAAGCCCACAAGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
* * * ** * **
125076 ATTAGTGGCAACCTTTT-TAAAGTTCATATG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * ** * * * * * *
125106 AGTTGGTGGTAACCTTTTCAAAAGCCCACACAAATT-GTCGGTAGCCTTTTTAAAAGTCCACACG
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGT-GGCAACC-TTTTCAAAGCCCACAAG
* * * *
125170 AGTTGATGACAACCTTTTC-AAAGTCCACATGA
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACA-AA
* * * * * ** * * * **
125202 A-TTGGGGGCAATCTTTTCAAAGGCCCACACAAGTTGGTGGTAACATTTTCAAAAGTCCACACTA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCACAAGA
** ** **
125266 GTTGGTGAAAACCTTTTC-AAA-GCTGCACG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * *
125295 AGTT-GTTGGCAACCTTTTCGAAAGCCCACATGAGTTAGTGGCAACTTTTTCAACAACCCACAAG
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAA-AGCCCACAAG
* * * **
125359 AGTTGGTGGCAACTTTTTTAAAAGCCCACACG
64 AGTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * ** * ** *
125391 ATTTGGCGACAACTTTTTC-AAAGTTCACACAAGTTTGTGGC-ACCATAGTCAAAGTCCACAAGA
1 AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC-TTTTCAAAGCCCACAAGA
* * * * * * *
125454 GTTAGTGGTAACATTTTAAAAAGTCTACATA
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * * *
125485 AGTT-GATTGCAACCATTTCAAAAGCCCACACGAATTGGTGGCAACCTTTTTAAAGTCCATATGA
1 AGTTAG-TGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGA
* * ** **
125549 CTTGGTGGCAACCTTTTCAAAAGACTGCACG
65 GTTGGTGGCAACCTTTTCAAAAGGCCACAAA
* * * * * * * *
125580 TGCTATTGG-AAGCTTTTTTAAAAGCCCACATGAGTTGATGGCAACCTTTTCAAAGTCCACATA-
1 AGTTAGTGGCAA-CCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACA-AG
*
125643 AGTTAGG-GGCAACCTTTTC-AAAGCCCACACAA
64 AGTT-GGTGGCAACCTTTTCAAAAGGCCACA-AA
* *
125675 A-TT-GGGAGCAACCTTTTC-AAAGTTCACATGAGTT
1 AGTTAGTG-GCAACCTTTTCAAAAGTCCACATGAGTT
125709 TATGGCACCA
Statistics
Matches: 11922, Mismatches: 3044, Indels: 2050
0.70 0.18 0.12
Matches are distributed among these distances:
86 1 0.00
87 7 0.00
88 36 0.00
89 17 0.00
90 16 0.00
91 139 0.01
92 178 0.01
93 650 0.05
94 2639 0.22
95 4344 0.36
96 1628 0.14
97 150 0.01
98 141 0.01
99 67 0.01
100 16 0.00
101 68 0.01
102 763 0.06
103 732 0.06
104 16 0.00
105 9 0.00
106 22 0.00
107 53 0.00
108 5 0.00
109 34 0.00
110 98 0.01
111 60 0.01
112 18 0.00
113 5 0.00
115 4 0.00
116 3 0.00
117 3 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (95 bp):
AGTTAGTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAGCCCACAAGAG
TTGGTGGCAACCTTTTCAAAAGGCCACAAA
Found at i:110966 original size:127 final size:127
Alignment explanation
Indices: 110803--111111 Score: 317
Period size: 127 Copynumber: 2.4 Consensus size: 127
110793 AAGTCTACAT
* * * * *
110803 GAGTTGGTGGCAACCTTTTCAAAAGTTTAGAAGAGTTGGTAATAACCTTTTCAAAAGCTCACATG
1 GAGTTGGTGGCAACCCTTTCAAAAGTCTACAAGAGTTGGTAATAACCTTTTCAAAAGCCCACACG
* *
110868 AGTTGG-TGACAACCTTTTTAAA-GTCCACACAAGTT-GTTGGTAACCTTTTCAAATGCTCGCAC
66 AGTTGGTTG-CAACCTTTTAAAAGGCCCACAC-AGTTAG-TGGTAACCTTTTCAAATGCTCGCAC
* * ** * *
110930 GAGTTGTTGGCAACCCTTTCAAAA-TCCTACATGAGTTGGTGGTAACTTTTTCAAAATCCCACAC
1 GAGTTGGTGGCAACCCTTTCAAAAGT-CTACAAGAGTTGGTAATAACCTTTTCAAAAGCCCACAC
*
110994 GAGTTGGTTGCAACCTTTTAAAAGGCCCACACAGTTAGTGGTAACCTTTTCAAAAAT-C-CACAC
65 GAGTTGGTTGCAACCTTTTAAAAGGCCCACACAGTTAGTGGTAACCTTTTC--AAATGCTCGCAC
* * * * ***
111057 GAGTTGGAGTCAACCTTTTTAAAAG-CTCACAAGAGTTGGTGGCAACCTTTTCAAA
1 GAGTTGGTGGCAACCCTTTCAAAAGTCT-ACAAGAGTTGGTAATAACCTTTTCAAA
111112 TTTCACATAA
Statistics
Matches: 152, Mismatches: 22, Indels: 16
0.80 0.12 0.08
Matches are distributed among these distances:
126 3 0.02
127 134 0.88
128 11 0.07
129 4 0.03
ACGTcount: A:0.30, C:0.21, G:0.19, T:0.30
Consensus pattern (127 bp):
GAGTTGGTGGCAACCCTTTCAAAAGTCTACAAGAGTTGGTAATAACCTTTTCAAAAGCCCACACG
AGTTGGTTGCAACCTTTTAAAAGGCCCACACAGTTAGTGGTAACCTTTTCAAATGCTCGCAC
Found at i:111281 original size:32 final size:32
Alignment explanation
Indices: 111231--128155 Score: 7010
Period size: 32 Copynumber: 527.7 Consensus size: 32
111221 AGTCCACTCA
* ** * *
111231 AGTTGGTGGTAATATTTTCGAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
111263 AGTTGTTGGCAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
111295 AGTTGGTGGCAGCCTTTTTAAAAGCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * *
111327 AGTTGATGATAACATTTTTAAAAGCCCACACC
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
111359 AGTTGATGGTAACCTTTTC-AATGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
111390 AGTTGGTGGCAACCTTTTC-AAAGAACACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
111421 AGTTAGTGGCAACCATTTC-AAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *** *
111452 AGTTGGTGGCAATCTTTTCAAAAGCTTGCACT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
111484 AGTTGTTGGCAGCTTTTTTAAAAGCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
111516 GGTTGATGGCAACCTTTTC-AAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
111547 AGTTGG-GGCAACCTTTTC-AAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
111577 AGTTAGTGGTAACCTTTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
111608 AGTTGGTGGTAACATTTT-AAGAAGCCCAAACT
1 AGTTGGTGGCAACCTTTTCAA-AAGCCCACACG
* * *
111640 AGTTGGTGGCAACCATTTC-AATGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
111671 AGTTGGTGGCAACCTTTTCAAAAGCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * **
111703 ATTTGGTGGTAAACTTTTTAAAGGCTTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
111735 AGTTGGTGGAAACCATTTCAAAA-TCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * *
111766 AGTTGATAGAAACCTTTT-AGAAGTCCATAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
111797 AGTTGGTGGCAAACTTTTCAAAAGCCCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTT--------CAAAAGCCCACACG
* *
111837 AGTTGGTGGCAACCATTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
111868 AGTTGGTGTTAACCTTTTCAAAAGTCTACA-A
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
111899 ATATTCGTGGCAACCTTTTC-AAAGTCCACACA
1 A-GTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
111931 AGTTGATGACAACCTTTTC-AAAGTCCATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
111962 AGTTGTTGGCAACCTTTTCAAAATG-CCATACG
1 AGTTGGTGGCAACCTTTTCAAAA-GCCCACACG
* * * ** *
111994 AGTTGGTGGTAACTTTTTCAAAATCTTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
112026 AGTTGGTAGCAAACTTTTCAAAATCCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
112058 AGTTGGTAGG-AACATTTTCAAAAGTCTATGA-G
1 AGTTGGT-GGCAACCTTTTCAAAAGCCCA-CACG
** *
112090 AGTTGGTCACAACCTTTTCAAAAGCCCATACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
112122 AGTTGGTGATAACTTTTTC-AAAGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** *
112153 AATTGTTGGCAACCTTTTCAAAAGCTAACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *** *
112185 AGTTGGTGGCAACCTTTTCAAAATCTTGCATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
112217 AGTTGGTGGTAACC-TTTCAAAATCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
112248 AGTTGGTAGCAACCTTTTCAAAAGCCTATA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
112279 AAGTTGG-CGCTAAGCTTTGCAAATGGCCATACG
1 -AGTTGGTGGC-AACCTTTTCAAAAGCCCACACG
** *
112312 AGTTGGTGGCAACCTTTTCAAAAATCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** ** **
112344 AGTTAATGGCAACAATTTC-AAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
112375 AGTTGATTGCAACC-TTTCAAAAGTCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
112406 AATTGGTGGCAAGCTTTTAAAAAGCCCAATAGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCC---A---CAC--G
* * * *
112446 AATTTGTGGCAACCATTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
112477 AGTTGGTGGCAACATTTTCAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
112509 AGTTGGTGGCAACCATTTT-AAAAGCTCACAGG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * *
112541 AGTTGGTGACAACCTTTTC-AAAGTCCATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
112572 AGTTGTTGGCAACCTTTT-TAAAGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
112603 AGTTGTTGACAACCCTTTCAAAATCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
112635 AGTTGGTGGCAACTTTTTTAAAATCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
112667 AATTGGTAGCAACCTTTTCAAAGGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
112699 AGTTGGTGGTAACTTTTTCAAAAATCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
112731 AGTTGGTGGCATCCTTTTTAAAAGCCCAGATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
****
112763 AGTTGGTGGCAACCTTTTTC-AAATTTTACACG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * *
112795 AGTTTGTGGTAACATTTTCGAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
112827 AGTTATTGGTAACATTTTCAAAAG-CCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
112858 AGATGGTAGCAACCTTTTTAAAAGCACACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
112890 AGTTGATGGCAACCTTTT-AAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
112921 AGTTGGTGGCAACCTTTTC-AAAGCCCATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * **
112952 AGTTAGTGGAAACCATTTC-AAAGTCCGCATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *** *
112983 AGTTGGTGGCAATTTTTTCAAAAGCCTGTACT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
113015 AGTTGTTGGCAGCCTTTTTAAATGCCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * *
113047 GGTTGAAGGCAACCTTTTC-AAAGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
113078 AGTTGGGGGTAACCTTTTC-AAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
113109 AGTTGGTGGCAACCTTTTAAAAAGCCCAAAAT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
113141 TGTTAGG-GACAA-CTATTTC-AAAGTCCACACA
1 AGTT-GGTGGCAACCT-TTTCAAAAGCCCACACG
* * * * *
113172 AGTTGATAGCAACCCTTT-AAAAGTCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
113203 AGTTGGTGGCAAACTTTTCAAAAGCCTAAAAGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAG-C------C-CACACG
* * * **
113243 AATTGGTGGTAACCATTTC-AAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * **
113274 AATTGGCGGTAACTTTTTCAAAAGTCTACAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
113306 AGTTCATGGCAACCTTTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
113337 AGTTGCTGGCAACCTTTTC-AAAGTCCATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
113368 AGTTGTTGGCAACCTTTTCAAAAGGCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
113400 AGTTGGTGGTAACCTTTTCAAGATCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
113432 AGTTGGTAGCAAACTTTTCAAAATCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
113464 AGTTGATAGAAAACTTTTCAAAA-TCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
113495 ATTTGTTGGCAACCTTTTC-AAAGTCCA-AC-
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
113524 ATTTTCAGAAGT-TC-ACATGAGTTGGTGGCAACCTTTTCAAAGTCCACATG
1 A-GTT--G--GTGGCAACCT---TT--T--C-A-------AAAGCCCACACG
* *
113574 AGTTGATGGCAACGTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** *
113606 ATTTGGTGGCAGCCTTTTTTAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
113638 AGTTGATGACAACCTTTT-TAAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
113669 AGTTGGTGACAACCTTTTTAAAAGCCCAAAAGCCCACACG
1 AGTTGGTGGCAACC-TTTT-------CAAAAGCCCACACG
* * * *
113709 AGTTGGTAGCAAGCTTTTCAAAAGCCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *** * * *
113741 AGTTAGTAATAACATTTTC-AAAGTCAACAC-
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
113771 ACGTTGTTGGCAACCTTTTCAAAAGCCCACACG
1 A-GTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
113804 AGTTGGTGGTAACATTTTGAAAATCGCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
113836 AGTTGGTTGCAACCTTTTCAAAAACCCATA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
113867 AGTTGGTGACAACCTCTTC-AAAGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * ** *
113898 AGTTGTTAGAAACCTTTTCAAAAGCTTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
113930 AGTTGGTGGCAACCTTTTTAAAATCTCACTCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** *
113962 AGTTGGTGGC-GCTCTTTTCAAAATCTAACATG
1 AGTTGGTGGCAAC-CTTTTCAAAAGCCCACACG
* *
113994 AGTTGGTAGCAACCTTTTCAAAGGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
114026 AGTTGGTGGTAACCATTTCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
114058 AGTTGGTGGCAACCTTTGCAAAAGTCCACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
114090 AGTTGGTGGCAACATTTCCAAGAGCCCACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
114122 AGTTGGTGGCAACCTTTAC-AAAGTTCACCCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** *
114153 AGTTTGTGGCACCCTAGTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
**
114184 AGTTGGTGGCAACCTTTTCAAAAATCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
114216 AGTTGGTGGTAA-CTATTTC-ATAGTCTACACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
** * ** * *
114247 AGTTCATGCCAA-CAGTTCAAAAGTCCACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
114278 AGTTGGTGGCAACTTTTTCAAAAGCCCAAAAGCCCTTACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCC---A---C--ACG
* * *
114318 AATTGGTGGCAACCATTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
114349 AGTTGGTGGCAACCTTTTCAAAGGTCTAGAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
114381 AATTGGTGGCAACCTTTTCAAAAGCCTAGACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
114413 AGTTGGTGACAACCTTTTC-AAAGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
114444 AGTTGTTAGCAACCTTTTCAAAATCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
114476 AGTTGGTGGTAACCTTTTCAAAATCACACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
114508 AGTTGGTAGCAACCTTTGTCAAAA--CCATA-G
1 AGTTGGTGGCAACCTTT-TCAAAAGCCCACACG
* * * *
114538 AGTTGGTGACAAACTTTTC-AAA-CTCTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGC-CCACACG
* * * *
114569 AGTTGTTAG-AAGCTTTTTCAAAAGTCCACACG
1 AGTTGGTGGCAA-CCTTTTCAAAAGCCCACACG
* * * * * *
114601 AGTTAGTGACAACC-TTTCCAACGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
114632 AGTTGGTGGCAGCTTTTTTAAAAGCCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
114664 AGTTGGTGGCAA-CTTGTCCAAAATCCCACTCG
1 AGTTGGTGGCAACCTT-TTCAAAAGCCCACACG
* * * * **
114696 ATTTGGTCGTAACCTTTTCAAAATCTGACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
114728 AGTAGGTAACAACC-TTTC-AAAGACCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAG-CCCACACG
* * * *
114759 AGTTGGTGGTAACCATTTCAAAAGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
114791 AGTTGGTGGCAACCTTTGCAAAAGGCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
114823 AGTTGGTGACAACCTTTTCAAGAGCTCATAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** *
114855 AGTCGGTGACAACCTTTTCAAAAATCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
114887 AGTTAGTTGTAA-C-TAT-AAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
114916 AGTTAATGCCAACCTTTT-AAAAGTCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
114947 AGTTGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTT--------CAAAAGCCCACACG
* * * * * * *
114987 AATTAGTGACAACCATTTC-AAAGTCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
115018 GGTTGGTGACAACCTTTTCAAAAGTCTAGAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
115050 AGTTGGTGGCAA-CTATTTCAAAATCCTACACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * *
115082 AGTTGGTAGCAACCTTTTCAAAGGCCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
115114 AGTTGGTGGTAACCTTTTCAAAATCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
115146 AGTTGGTGGAAAACTTTTCAAAATCACACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
115178 AGTTGGTGGCAACCTTTTCAAAA-TCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
115209 AGTTTTTGGCAACCTTTTCCAAAGCTCACGCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
115241 AGTTGGTAGCAACCTTTTCAAAGGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
115273 AGTTGGTGGGAACCTTTTCAAAAGTCCACACT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
115305 AGTGGGTAGCAACC-TTTCCAAAGCCCACAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
115336 AGTTGTTGGCAACCTTTTCAAAAG-CCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
115367 AGTT-GTGACATCC-TTTCAAAATCCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
115397 AGTTGGTAGCAACCTTTTCAAAAGCCTGCACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * * * *
115429 AGTTGGTGTTAAGCTTTGCAAATGGCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
115461 AGTTGGTGGCAACTTTTTC-AAAGCCCAAATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** *
115492 AGTTGTTGGTAACCTTTTCAAAAGCTGACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
115524 AGTTGGTGGCAACCTTTTCAAAAATCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *** *
115556 AGTTGGTAGCAACTTTTTCAAAAATTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
115588 TGTTGGTGGCAA-CTATTT-TAAAGTCCACACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * * ** ** **
115619 TGTTGCTAGAAACC-TTTCAAAAATCCGTAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
115650 AGTTGCTGGCAACCATTTTAATAGCCCAAAAGTCCACACA
1 AGTTGGTGGCAACC--TTT--T----CAAAAGCCCACACG
* * * *
115690 AATTGGTAGCAACCATTTC-AAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * **
115721 AGTTGGTGGTAACTTTTTCAAAAGTCTACAAT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
115753 AGTTGGTGGCAAACTTTTCAAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * *
115785 AGTTAGCAGCAACC-TTT----AGCTCACACT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
115812 AGTTAGCGGTAA-CTTTTGGAGAAA-CCCACACG
1 AGTTGGTGGCAACCTTTT-CA-AAAGCCCACACG
* * *
115844 AGTTGGTGGTAACCTTTTTAAAAGCCCACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** **
115876 AGTTAGTGGTTACCTTTTC-AAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
115907 AGGTT-GTGGC-ACCATAGTC-AAAGTCTATACG
1 A-GTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * * *
115938 AGTTGGTAGTAACTTTTTCAAAAGCCTACACT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
115970 TGTTGGTAGTAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
116002 AGTTGGTGGCAACCATTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
116033 AGTTGATGGCAACC-TTTCAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
116064 AGTTGGTGGCAACTTTTTTAAAAGCCCAAAAGCCCACAAG
1 AGTTGGTGGCAAC-CTTTT-------CAAAAGCCCACACG
* ** * *
116104 ATTTGGAAGCAA-CTATTTC-AATGTCCACACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * * *
116135 AGTTGGTGGTAACCTTTTGAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
116167 AGCTAGG-GGCAACTTTTTCAAAAGCCCACACG
1 AG-TTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
116199 AGTTGGTAACAACCTCTTT--AAAGTCTACACA
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* *
116230 AGTTGTTGGCAACCTTTTTTTAAAAAGCCCACACG
1 AGTTGGTGGCAACC---TTTTCAAAAGCCCACACG
* ** * * *
116265 AGTTAGTAACAACCTTTTC-AAAGTCAACA-T
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
116295 ATGTTGTTAGCAACCTTTTCAAAAGCCCACATG
1 A-GTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
116328 AGTTGGTAGTAACTTTTTCAAAATCACACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
116360 AGTTGGTAGCAACCTTTTCAAAAAG--CACA-G
1 AGTTGGTGGCAACCTTTTC-AAAAGCCCACACG
* * * * * *
116390 AGTTGGTGACAACCTTTCCAAAATCCTACTCA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **** *
116422 AGTTGGTCGCAACATTTTCAAAATTTGACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
116454 AGTTGGTAGCAACC-TTTCAAAGGCCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
116485 AGTTGGTGGTAACCATTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
116517 AGTTAGTGGTAACCATTTCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
116549 GGTTGGTGGCAACCTTTT-AAAGAGCTCACAAG
1 AGTTGGTGGCAACCTTTTCAAA-AGCCCACACG
* * * *
116581 AGTTGGTGGCAACCTTTTCAAGAGCTCATAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
116613 AGTTGGTGGCAACCTTTTCAAAAATCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
116645 TGTTAGTGGTAA-CTATTTC-AAAGTCTACACT
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
** * * **
116676 AGTTAAT-GCTAACC-TTTCAAAAGTCCATAAT
1 AGTTGGTGGC-AACCTTTTCAAAAGCCCACACG
* *
116707 AGTTGGTGGTAACCTTTTCAAAAGCCTACGA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCAC-ACG
* * * *
116739 AGTTGGTCGTAACCTTTTCAAAAGCCTACTTA-A
1 AGTTGGTGGCAACCTTTTCAAAAGCCCAC--ACG
* ** * * * **
116772 AGTCCACATAAGTTGTTGGCAACCTTTTCAAAAACTCACATA
1 AGT-----T--G--GTGGCAAC-CTTTTCAAAAGCCCACACG
* * *
116814 AGTTGGTGGAAACCTTTTCAAAATCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
116846 AGTTGATAGCAACCCTTTCAAAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * **
116878 AGTTGCTGACAACCCTTTC-AAAGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** * * * *
116909 AGTTGTTTGCAATATTTTCAGATGCCTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
116941 AGTTGGTGGTAATCTTTTC-AATGCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
116972 AGTTGTTGGCAACCTTTTTAAAATCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
117004 AGTTGGTGGTAACCTTTTTAAAAGCTCGCATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
117036 AGTTAGTGGTAACCTTTTC-CAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * *
117067 AGTTTGTGGC-ACCATAGTC-AAAGTCTACACA
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * * * *
117098 AGTTGGTAGTAACTTTTTTAAAAGCCTACA-T
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
117129 ATGCTGCTGGTAACCTTTTCAAAAG-CCACACG
1 A-GTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
117161 AGTTGGTGACAACCATTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117192 AGTTGATGGCAACC-TTTCAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
117223 AGTTTGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCC---A---CAC--G
** * * * *
117263 AGTTGGAAGCAA-CTATTT-TAATGTCCATACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * *
117294 AGTTGGTGGCAACCTTTTGAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
117326 AGTTAGG-GTCCATCTTTTCAAAAGCCCACACG
1 AGTT-GGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
117358 AGTTGGTAACAACCTTTTC-AAAGTCTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
117389 AGTTGTTGGCAACCTTTTTTTAAAAAGCCCACATG
1 AGTTGGTGGCAACC---TTTTCAAAAGCCCACACG
* *** * * **
117424 AGTTAGTAATAACCTTTTC-AAAGTCAACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117455 AGTTGTTAGCAACCTTTTCAAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117487 AGTTGGTAGTAACCTTTTCAAAATCACACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
117519 AGTTGGTAGCAACCTTTTCAAAA-ACCACA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
117549 AGTTGGTGACAACCTTTTC-AAA-CTTTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGC-CCACACG
* *** * *
117580 AGTTGTTAAAAACTTTTTCAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * * **
117612 AGTTAATGACAACCTTTTC-AATGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117643 ACTTGTTGGCAACCTTTTCAAAAACCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117675 AGTTGGTGGCAACCATTCCAAAATCCCACTCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
117707 AGTTGGTCGCAACCTTTTCAAAATCTAACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
117739 AGTTGGTAGCAACC-TTTCAAAGGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
117770 AGTTGGTGGTAA-CTATTTCAAAATCCCACATG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * *
117802 AGTTGGTGGCAACCTTTGCCAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117834 AGTTGGTGGCAACCTTTTCAAAAGTCTAAAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117866 AGTTGGTGGCAATCATTTCAAAAGCTCATACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
117898 AGTTAGTAGCAACCTTTTCAAAGGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
117930 AGTCAGTGGGAATCTTTTCAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
117962 AGTTGGTAGCAACATTTTC-AAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
117993 AGTTGTTGGCAACCTTTTCAAAAGCCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * *
118025 AGTTGGTAACAACC-TTTCAAAATCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
118056 AGTTGGTAGCAACCTTTTCAAAAGCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
118088 AGTTGGTGGTAAGCTTTGT-AAATGGCCACACA
1 AGTTGGTGGCAACCTTT-TCAAAAGCCCACACG
** * *
118120 AGTTGGTGGCAAATTTTTC-AAAGCCCAAATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
118151 AGTTATTGGCAACCTTTTCAAAA-CCCGACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCC-ACACG
** **
118183 AGTTGGTGGTTACCTTTTCAAAAATCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ***
118215 AGTTGGTGGGAACCTTTTCAAAAATTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
118247 AGTTGGTGGTAA-CTATTTC-AAAGTCCACATG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * * * **
118278 AGTTGATAGCAACC-TTTCAAAAGTCTATAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
118309 AGTTGGTGGCAACCTTTTTAATAGCCCAAAAGCCCACACA
1 AGTTGGTGGCAACC--TTT--T----CAAAAGCCCACACG
* * *
118349 AATTGGTGGTAACCATTTC-AAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * * ** *
118380 AGTTGATGATAACTTTTTTAAAAGTCTTCAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
118412 AGTTGGTAGCAACTTTTTCAAAAGCCCACGTG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
118444 AGTTAGG-ACCAACCTTTTCAAAATCTCACATG
1 AGTT-GGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * *
118476 AGTAGATGGCAACATTTTTAAAATCCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
118508 AGTTGGTAGCAACCTTTTCAAAGGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
118540 AGTTGGCGGTAACCTTTTCAGAAGTCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
118572 AGTTGGTGATAACATTTTC-AAAG-CCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
118602 AGTTGTTGTCAACCTTTTCAAAAGCCTACGTG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
118634 AGTTGGTGGAAACTTTTTCAACTA-CCTACACA
1 AGTTGGTGGCAACCTTTTCAA-AAGCCCACACG
***
118666 AGTTGGTGGCAACCTTTTC-AAAGTGTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ***
118697 AGTTAGTGGTAACCTTTT-AAAAGGTTGACACG
1 AGTTGGTGGCAACCTTTTCAAAA-GCCCACACG
* * * *
118729 AGTTGGTGGTAATCATTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
118760 AGTTGATAGCAACCTTTCAAAACCCCAAAAGCCTACACG
1 AGTTGGTGGCAACCTTT-------TCAAAAGCCCACACG
* * *
118799 AGTTGGTGGTAACCTTTTCAAAAGTCTACGA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCAC-ACG
**
118831 AGTTGGTCACAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * **
118863 AGTTGATAACAACCTTTT-TAAAGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * * *
118894 AGTTATTGGCAACCTTTCCAAAAGCTCATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
118926 AGTTAGTGGCAACCTTTTCAAAA-TCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
118957 AGTTGGTAGCAACCTTTTCAAAAGCTCACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
118989 AGTTGGTGACAACCTTTTC-AAAGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
119020 AGTTGTTGGCAACATTTTCAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
119052 AGTTGGTGGCAACCTTTTC-AAAGCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
119083 AGTTGTTGACAACCTTTTTAAAAGCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
119115 AGTTGGTGGTAA-CTTTTACAAAAAG-CCACACA
1 AGTTGGTGGCAACCTTTT-C-AAAAGCCCACACG
* * * * *
119147 AGTTAGTGGTAACCTTTTTAAAAGCCCATAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * **
119179 AGTTACTGGTAACCTTTTC-AATGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** * * *
119210 GGTTTGTGGC-ACCATAGTC-AAAGTCTACATG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * *
119241 AGTTGGTAGTAACTTTTTCAAAAGCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
119273 TGTTGATGGTAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * **
119305 AGTTGGTGGCAACCATTT-GAATGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
119336 AGTTGATGGCAACC-TTTCAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
119367 AGTCAGTGGCATCCATTTTAAAAGCCCAAAAGCCCATAAG
1 AGTTGGTGGCAACC-TTTT-------CAAAAGCCCACACG
** * * * * *
119407 AGTTGGAAGCCA-CTATTTC-AATGTCTACATG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * * *
119438 AGTTGGTGACAACCTTTTGAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
119470 AGTTGGTAGTAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*** * * *
119502 AGTTGGTAATAACCTTTTC-AAAGTCTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
119533 AGTTGTTGGCAACCTTTTCAAAAGCTCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * * * *
119565 AGTTGGTGATAACTTTTTCAAAATCTCGCATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * *
119597 AATTAGAGGTAACCTTTTCAAAATCACATAC-
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
119628 ATGTTGGTAGCAACCTTTTCAAAGGCCTC-CACG
1 A-GTTGGTGGCAACCTTTTCAAAAGCC-CACACG
** ** * * *
119661 AGTTTATGATAACCTTTTCGATAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
119693 AGTTGGTGGCAACCTTTTC-GAAGCCCACGTG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
119724 AGTTGTTGGCAACCTTATAAAAAGTCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
119756 AGTTGGTAGCAACCTTTTCAAAAACCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
119788 AGTTGGTAGCAACCTTTTCAAAA-CTGTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGC-CCACACG
* * *** *
119820 AGTTAGTGGCAA-CTATTTC-AAAGTCTGTAAG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
** * *
119851 AGTTGACGGCAACC-TTTC-AAAGTCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
119881 AGTTGGTGACAACCTTTTCAAAAGCCTAAAAACCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAG--------CCCACACG
* * * * *
119921 AATTGGTGACAACCATTTT--GAAGTCTACACG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * *** **
119952 AGTTAGTGGTAACCTTTTTAAAATTGCACAAT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
119984 AGTTGGTGGCAACCTTTTCAAAAGCCCACCCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
120016 AGTTGGTGACAACCTTTTC-AAAG-TCA-AC-
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
120044 A-TTGTTGGCAACATTTTCAAAAGCCCAAATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
120075 AGTTGGTGGTAACCTTTTCAAAATCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * ** *
120107 AGTTGGTGGTAACTTTTTCAAAATCTTAAACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
120139 AATTGGTAGCAACCTTTTCAAAGGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*** * ** *
120171 AGTTGGTTATAACATTTTCAAAATTCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
120203 AGTTGTTGGCAACCTTTTTAAAAGCTCGCATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
120235 -GTTTGGTGGTAACCTTTTC-AAA-CTTCACACG
1 AG-TTGGTGGCAACCTTTTCAAAAGC-CCACACG
* * ** *
120266 CGTTTGTGGC-ACCATAGTC-AAAGTCCA-AC-
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* **** * * ** ** * * *
120295 ATTTTCAAAAGCTCACACTAGTTGGATGGCATCATTTTTGAAG
1 A-GTT-GGTGGC-AAC-CT-TTTCAAAAGC-CCA-----CACG
* ** *
120338 TTTATAAAAGTTAGTGGC-ACCATAGTC-AAAGTCCACACG
1 --------AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * *
120377 AGTTAGTGGCAACATTTTCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
120409 AGTTGGTAGCAGCCTTATT-TAAAGCCCACACG
1 AGTTGGTGGCAACCTT-TTCAAAAGCCCACACG
** ** * *
120441 TCTTAATGGCAACCTTTTC-AAGGTCCACAC-
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
120471 ATGTTGGTGGCAACCTTCTCAAAAGCCTAAAAGCCTACACG
1 A-GTTGGTGGCAACCTTTTCAAAAG-C------CC-ACACG
** * *** *
120512 AGTTGGCAGTAACCTTTTCAAAAGCTGTCGCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * **
120544 AGTTAGTAACAACCTTTTC-AAAGTCAACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
120575 AGTTGTTGGCAACC-TTTCGAAGGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*** *
120606 AGTTGGTGGCAACCTTTTCAAAATAACACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
120638 AGTTGGTAGCAATCTTTTCAAAAACCCACA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
120669 TGTTGGTGACAACTTTTTC-AAAGTCTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
120700 AGTTGTTGGAAACATTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * *
120732 GGTTGATGACAACTTTTTCAAAA-TCCATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
120763 AGTTGTTGGCAACCTTTTCAAAAGCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * **
120795 AGTTTGTGACAACCCTTTT-AAAATCTCACTTG
1 AGTTGGTGGCAA-CCTTTTCAAAAGCCCACACG
* * * * * *
120827 AGTTGGTAGC-ACCTTCTCAAAATCTCAGATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
120858 AGTTGGTGGTAACCTTTTCAAAAGCGCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
120890 AGTTGGTGGC-ACCTTTTGCAAAAGTGCACATG
1 AGTTGGTGGCAACCTTTT-CAAAAGCCCACACG
* * *
120922 TGTTGGTGGC-ACGATTTTC-AAAGCCCAAACG
1 AGTTGGTGGCAAC-CTTTTCAAAAGCCCACACG
* *
120953 AGTTGTTGGCAACCTTTTCAAAAGCCCACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
120985 AGTTGGTGGCAACCTTTAC-AAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * ** * * *
121016 AGTTTATAGC-ACCATAGTC-AAAGTCTACATG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* ** * *
121047 AGTTGGAT-GTAATATTTTCAAAAGCCCATATG
1 AGTTGG-TGGCAACCTTTTCAAAAGCCCACACG
* * * * * * *
121079 AGTTGCTGGTAACCTTTT-TAAAGTCTATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * *
121110 AGTGTGGCGGC-ACCATAGTC-AAAGTCCAAAC-
1 AGT-TGGTGGCAACC-TTTTCAAAAGCCCACACG
***** *
121141 AGGTTGGTGGCAAAAAAGTC-AAAGTCCACACG
1 A-GTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
121173 AGTTGGTGGTAACATTTTCAATA--CGACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
121203 AGTTGGTAGCAACCTTTTCAAAAGCAGACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** * **
121235 AGTTTGTCGCTGCTCTTTT-TAAAGCCCACATA
1 AGTTGGTGGCAAC-CTTTTCAAAAGCCCACACG
** ** * *
121267 AGTTAATATCAACCTTTTC-AAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
121298 AGATGGTGGCAACCTTTTCAAAAGTCTAAAAGCCCACACA
1 AGTTGGTGGCAACC-TTT------TC-AAAAGCCCACACG
* ****
121338 AGTTGGTGGTAA-CTATTTC-AAAGTTTTCACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * *
121369 AGTAGGTGGCAACATTTTCAAAAGTCTACGA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCAC-ACG
* * *
121401 AGTTGGTCGCAACCTTTTCAAAAGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
121433 AGTTGGTGACAACCTTTTCAAAA-TCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * *
121464 AGTTGTTGGCAACCACTTCAAAAGCTCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
121496 AGATGGTGGCAACCTTTTCAAAATCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
121528 AGTTGGTAGCAACCTCTTCAAAAGCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * * *
121560 AGTTGCTAACAACCCTTTC-AAAGTCCGCACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
121591 AGTTGTTGGCAACATTTTCAGAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
121623 AGTTGGTGGCAACCTTTTC-AATGCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
121654 AGTTGTTGGCAACCATTTT-AAAATCTCACATG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* *
121686 AGTTGGTGGTAA-CTTTTACAGAAA-CCAACACG
1 AGTTGGTGGCAACCTTTT-CA-AAAGCCCACACG
* * * *
121718 AGTTGGTGGTAACCTTTTTAAAAGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
121750 AGTTAGTGGTAACCTTTTC-AAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * *
121781 AGTTTGTGGC-ACCATAGTC-AAAGTCTACAGG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * ** *
121812 AGTTGGTAGTAACTTTTTCAAAAGCGTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
121844 TGCTGGTAGTAACCTTTTCAAAAGCCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
121876 AGTTTGCGGCAACCATGTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *** *
121907 AGTTGATGGCAACC-TTTCAAAAGTTTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
121938 AGTTGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCC---A---CAC--G
** * * * *
121978 AGTTGGAAGTAA-CTATTTC-AATGTCCATACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * *
122009 AGTTGGTGGCAACCTTTTGAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
122041 AGTTAGG-GACAACCTTTTCAAAAGCCCACATG
1 AGTT-GGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
122073 AGTTGGTAACAACCTTTTC-AAAGTCTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122104 AGTAGTTGGCAACTTTTTTTTTAAAAAGCCCACACG
1 AGTTGGTGGCAAC----CTTTTCAAAAGCCCACACG
* ** * * **
122140 AGTTAGTAACAACCTTTTC-AAAGTCAACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
122171 AGTTGTTAGCAACCTTTTCAAAAGCCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * *
122203 AGTTGGTAGTAACTTTTTCAAAATCACATACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
122235 AGTTGGTAGCAACCTTTTCAAAA-ACCACA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
122265 AGTTAGTGACAACCTTTTC-AAA-CTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGC-CCACACG
** * * * * * *
122296 AGTTATTAGAAACTTTTTTAAAAGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * * *
122328 AGTTAATGACAACCTTTTC-AATGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122359 ACTTGTTGGCAACCTTTTCAAAAACCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122391 AGTTGGTGGTAACCTTTCCAAAATCCCACTCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
122423 AGTCGGT--C--GC---TCAAAATCCTATACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * * *
122448 AGTAGGTAGTAA-CATTTGAAAGGCTCATACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
122479 AGTTGGTGGTAACCATTTCAAAAGCCCA-ATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122510 GGTTAGTGGCAACCTTTGCAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
122542 AGTTGGTGGCAACCTCTTCAAGAGCTCATAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
122574 AGTTGGTGGCAACCTTTTGAAAAATCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122606 TGTTAGT-GCTAA-CTATTTC-AAAGTCCACACT
1 AGTTGGTGGC-AACCT-TTTCAAAAGCCCACACG
** * * *
122637 AGTTAATGCCAACC-TTTCAAAAGTCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
122668 AGTTGGTGGCAACTTTTTCAAAAGCCCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTT--------CAAAAGCCCACACG
* * * * *
122708 AATTAGTGGAAACCATTTC-AAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122739 AGTTGGTGGCAACCTTTTCAAAAGTCTAGAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122771 AGTTGGTGGCAATCATTTCAAAAGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
122803 AGTTGGTAGCAACCTTTTCAAAGGCCGACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
122835 AGTCGGTGGGAACCTTTTCAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
122867 AGTTGGTAGCAACCTTTTC-AAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
122898 AGTTATTGGCAACCTTTTTAAAAGCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
122930 AGTTGGTGACGACC-TTTCAAAATCCTGCACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
122961 AGTTGGTAGCAACCTTTTTAAAAGCCTACAC-
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * ** *
122992 ATGTTGGTGGTAAGCTTTGCAAATGGGCACACA
1 A-GTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
123025 AGTTGGTGACAACTTTTTC-AAAGCCCAAATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
123056 AGTTGTTGGCAACCTTTTCAAAAGCTGACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
123088 AGTTGGTGGTAACCTTTTCAAAAATCCAGACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *** *
123120 AGTTGGCAAG-AACCTTTTCAAAAATTCACACA
1 AGTTGG-TGGCAACCTTTTCAAAAGCCCACACG
** *
123152 AGTTGGTGGCAA-CTATTTC-AAAGTGCACATG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * * *** **
123183 AATTGATAGCAACC-TTTCAAAAGTCTGTAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
123214 AGTTGGTAGCAACCTTTTCAATAGTCCAAAAGCCCACACA
1 AGTTGGTGGCAACC--TT---T--T-CAAAAGCCCACACG
* * * *
123254 AATTTGTGGTAACCATTTC-AAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
123285 AGTTGATGGCAACTTTTTCAAAAGTCTATAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
123317 AGTTGGTAGCAA---TGTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * * *
123346 AGTTAGCAGCAACCTTTTCAAAATCTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * * * **
123378 AGTTGATGGAAACATTTTTAATATCCCATATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
123410 AGTTCGTAACAACCTTTTCAAAAG-CCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
123441 AGTTGGTGGTAACCTTTT-AAGAAGTCCATACG
1 AGTTGGTGGCAACCTTTTCAA-AAGCCCACACG
** * *
123473 AGTTGGTGATAACCTTCTC-AGAG-CCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * **
123503 AGTTGTTGTCAACATTTTTAAAAGCCTACGTG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** **
123535 AGTTGGTGGTAACTTTTTCATTTA-CATACACG
1 AGTTGGTGGCAACCTTTTCA-AAAGCCCACACG
* * *
123567 AGTTGGTGGCAACCTTTTC-AAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
123598 AGTTGGTGGTAACCTTTT-AAAAGGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAA-GCCCACACG
* * * * *
123630 AGTTGGTGGTAATC-ATTCCAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
123661 AGTTGATAGCAACCTTTCAAAAGCCCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTT-------TCAAAAGCCCACACG
* *
123700 AGTTGATAGCAACCTTTTAAAAGCCCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTT-------CAAAAGCCCACACG
* * *
123739 AGTTGGTAGCAACCTTTTCAAAAGTCTACGA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCAC-ACG
* * ** *
123771 AATTGGTCGCAACCTTTTCAAAAATCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * **
123803 AATTGGTGACAACCTTTT--TAAGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
123833 AGTT-GTCAGCAACCTTTTCAAAAGCTCACACA
1 AGTTGGT-GGCAACCTTTTCAAAAGCCCACACG
* *
123865 AGTTGGTGGCAACCTTTTCAAAATCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
123897 AGTTGGTAGCAACCTTTTCAAAAGCTTACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
123929 AGATGGTGACAACCTTTTC-AAAGTCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
123960 AGTTGTTGGCAACATTTTCAAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
123992 AGTTGGTGGCAACCTTTGC-AAAGCCTGCATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
124023 AGTTGTTGGCAACCTTTTTAAAAGCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
124055 AGTTGGTGGTAA-CTTTTACAGAAAG-TCACATG
1 AGTTGGTGGCAACCTTTT-CA-AAAGCCCACACG
* * * *
124087 AGTTGGTGGTAACCTTTGT-AGAAGCCCATAGG
1 AGTTGGTGGCAACCTTT-TCAAAAGCCCACACG
** * * **
124119 AGTTATTGGTAATCTTTTC-AAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** ** * *
124150 AGTTTGCAGC-ACCATAGTC-AAAGTCTACA-G
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * * *
124180 AGTTGGTAGTAACTTTTTCAAAAACCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
124212 TGCTGGTGGTAACTTTTTCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
124244 AGTTGGTGGCAACCATTT-GAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
124275 AGTTGATGGCAACC-TTTCAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
124306 AGTTGGTGGCAGCCTTTTCAAAAGCCCAAAAGCCCATAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCC---A---C--ACG
** ** * *
124346 AGTTGGAAGTTA-CTATTTCAATA-TCCACACG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * * *
124377 AGTTGGTGGTAACCTTTTGAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
124409 AGTTGGTAGTAACCTTTACAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * *
124441 AGTTGGTAACAACCTTTTC-AAAGTCTACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
124472 AGTTGTTGGCAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * * * * * **
124504 AGTTGGTGATAACTTTTTCAATATCTCGCATT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
124536 AGTTGGTGGTAACCTTTTCAAAATCACATAC-
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * *
124567 ATGTTGGTAGAAACCTTTTCAAAGGCCTATATG
1 A-GTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * ** *
124600 AGTTTGTGATAACCTTTTCAATAGTTCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
124632 AGTTGGTGGCAGCCTTTTC-AAAGCCCACGCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
124663 AGTTGTTGGCAACCTTATAAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * *
124695 AGTTGGTGGCAACCTTTTCAAAAATCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
124727 AGTTGGTAGCAACCTTTTCAAAA-CTCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGC-CCACACG
* *
124759 AGTTGGTGGCAA-CTATTTC-AAAGTCCACACA
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* ** *
124790 AGTTGTTGGCAATATTTTCAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
124822 AGTTGGTGGCAACCTTTTC-AAAGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
124853 AGTTGTTGGCAACCATTTT-AAAAGCTCAAACA
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* *
124885 AGTTGTTGGCAA-CTTTTACAAAAACCCACACG
1 AGTTGGTGGCAACCTTTT-CAAAAGCCCACACG
** * **
124917 AGTTGGTGATAACCTTTTTAAAAGCCCATTCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
124949 AGTTAGTGGTAACCTTTTC-AAAGTTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** * * *
124980 AGTTTGTGG-TACCATAATC-AAAGTCTACACA
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * * *** *
125011 AGTTAGTGGTAACGTTTTTAAAAGTTGACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
125043 AGTTGATGGCAACCATTTCAAAAGCCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * ** * *
125075 AATTAGTGGCAACCTTTT-TAAAGTTCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
125106 AGTTGGTGGTAACCTTTTCAAAAGCCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
125138 AATT-GTCGGTAGCCTTTTTAAAAGTCCACACG
1 AGTTGGT-GGCAACCTTTTCAAAAGCCCACACG
* * * *
125170 AGTTGATGACAACCTTTTC-AAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
125201 AATTGGGGGCAATCTTTTCAAAGGCCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
125233 AGTTGGTGGTAACATTTTCAAAAGTCCACACT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** **
125265 AGTTGGTGAAAACCTTTTC-AAAG-CTGCACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
125295 AGTTGTTGGCAACCTTTTCGAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
125327 AGTTAGTGGCAACTTTTTCAACAA-CCCACAAG
1 AGTTGGTGGCAACCTTTTCAA-AAGCCCACACG
* *
125359 AGTTGGTGGCAACTTTTTTAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * ** *
125391 ATTTGGCGACAACTTTTTC-AAAGTTCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** * *
125422 AGTTTGTGGC-ACCATAGTC-AAAGTCCACAAG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * * * * **
125453 AGTTAGTGGTAACATTTTAAAAAGTCTACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
125485 AGTTGATTGCAACCATTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
125517 AATTGGTGGCAACCTTTT-TAAAGTCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
125548 ACTTGGTGGCAACCTTTTCAAAAGACTGCACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** * * *
125580 TGCTATTGG-AAGCTTTTTTAAAAGCCCACATG
1 AGTTGGTGGCAA-CCTTTTCAAAAGCCCACACG
* * **
125612 AGTTGATGGCAACCTTTTC-AAAGTCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
125643 AGTTAGG-GGCAACCTTTTC-AAAGCCCACACA
1 AGTT-GGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
125674 AATTGG-GAGCAACCTTTTC-AAAGTTCACATG
1 AGTTGGTG-GCAACCTTTTCAAAAGCCCACACG
** ** * *
125705 AGTTTATGGC-ACCATAGTC-AAAGTCTA-AC-
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* ** * * * *** ** *
125734 ATTTTCAGAAGCTCACACGAGTTGGTGGTAA-CCTTTTCA-A
1 A-GTT--GGTG-GCA-AC--CTT-TTCAAAAGCC--CACACG
***** * * *
125774 AG-TCCACACAA-GTTGTTGGCAACATTTATAAAAGCCCAGAAG
1 AGTTGGTGGCAACCTT-TT-----C------AAAAGCCCACACG
* * ** * ** *
125816 ACTTGGAGAAAACCTTTTCAAAATCTGACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * ** *
125848 AGTTAATGGC-A---TTTCAAAATCCTGCATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
125876 AGTTGGTAGG-AAACTTTTCAAAGGCCCAAATG
1 AGTTGGT-GGCAACCTTTTCAAAAGCCCACACG
* * * *
125908 AGTTGGTGGTATCCTTTTCAAAAGGCCACCCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
***
125940 AGTTGGTGGCAACCTTTTC-AAAGCCCTTGCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
125971 AGTTGTTGGCAATCTTTTCAAAAGCCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
126003 AGTTGGTAGCAACCTTTTTAAAA-CCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
126034 AGTTTGTGGGAACCTTTTTTAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * ** **
126066 AGTTGGCAGCAACCTTTTC-AAGGTTCACAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** * *
126097 AGTTTGTGAC-ACCATAGTC-AAAGTCCACATG
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * ***
126128 AGTTGGTGGTAACATTTTCAAAAGTCTGTACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
126160 AGTTGGTGGCAACCTTTTTAAAAGCCCACCCG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
126192 AGTTAGTGGCAACCTTTT-GAAAGTCCATATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
126223 AGTTGGTGGCAACCTTTTCAAAAGCCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * * **
126255 AGTTGTTGGTAGCCTTTTTAAAATG-CTACAAT
1 AGTTGGTGGCAACCTTTTCAAAA-GCCCACACG
* * * *
126287 AGTTGATGGTAACCTTTTC-AAAGCCCAAATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
126318 AGTTGAG-GGCAACCTTTTC-AAAGCCCGCACG
1 AGTTG-GTGGCAACCTTTTCAAAAGCCCACACG
* * * *
126349 AATTGGGGGCAACCTTTTC-AAATCCCACACC
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * ** *
126380 AGTTTGTGG-TACTTTTTC-AAAGTTCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
126410 AGTTTGTGGC-ACCATAGTT--AAAGTCTA-AC-
1 AGTTGGTGGCAACC-T-TTTCAAAAGCCCACACG
* ** * * * *** *
126439 ATTTTCAGAAGCCTACACAAGTTGGTGGCAA-CCTTTTCAAAGTCTG
1 A-GTT--GGTGGC-A-AC--CTT-TTCAAAAGCC----CACA--C-G
** * *
126485 TAAAAGTTGGTGGC-ACCATAGT-GAAAGTCCACACG
1 ----AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * * * *
126520 AGTTGGTGGCAACATTCTCAAAAACTCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
126552 AGTTGATGGCAACCTTTTCAAAGGCCTACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
126584 AGTTGGTAGCAGCCTTTTC-AAAGTCCACAAA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
126615 AGTTGTTGGCAACCTTTTCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * *
126647 AGTTGGTGGCAACCTTTTCAAAATTCAACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
126679 AGTTTGTGGCAAAC-TTTCAAAATCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * *
126710 AGTTAGTAGCAACCTTTTCAAAAGCCTATACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*** * * * *
126742 AGTTGGT-GCTATGGTTTGCAAATGGCCGCACG
1 AGTTGGTGGC-AACCTTTTCAAAAGCCCACACG
* * *
126774 AGTTGGTGGTAACTTTTTC-AAAGCCCAAACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
126805 AGTTGTTGGTAACCTTTTCAAAAGTCGACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* **
126837 AGTTGATGGCAACCTTTTCAAAAATCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
126869 AGTTGGTGGTAACCTTTTTAAAAATCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
126901 AGTTGGTGGTAA-CTATTTC-AAAGTCCACATG
1 AGTTGGTGGCAACCT-TTTCAAAAGCCCACACG
* * * *
126932 AGTTGATGGCAA-CGTTTCAAAAGTCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
126963 AGTTGATGGCAACTTTTTCAAAAGCCCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCC---A---CAC--G
* * *
127003 AATTGTTGGCAACCATTTC-AAA-CCCTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCC-ACACG
* * *
127034 AGTTGGTGGCAACCTTTTCAAAAGTCTACAAG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
127066 AGTTGGTGGCAACCGTTGCAAAAGCTTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** ** * *
127098 AGTTAGTGATAA-CTTTTTGAAAGTCCACACT
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
127129 AGTTGTTGGCAACCTTTTCAAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
127161 AGTTGGTGGCAACCTTTTCAAAATCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
127193 AGTTGGTGGTAACCTTTTCAAAATCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
127225 AATTGGTAGCAACCTTTTCGAAAGCCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** * ** * ***
127257 AGTTGGTGATAACCTTTTTAAAAATCAATTTG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * **
127289 AGTTGGTGGCTAA-CTTTTTAAAA-CCTCGCTTG
1 AGTTGGTGGC-AACCTTTTCAAAAGCC-CACACG
***
127321 AGTTGGTGGCAACCTTTTCAAAA-TTTACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * ** ** *
127352 AGTT--T-GTATCATAGTC-AAAGTCTAACATTTTTAG
1 AGTTGGTGGCAACCTTTTCAAAAG-CCCACA-----CG
* *** * * * * **
127386 AAGTTCACACAGTTGGTGGCAACCTTTTC-AAAGTCTATAAA
1 -AGTT------GGTGGCAAC-C--TTTTCAAAAGCCCACACG
* * ** * *
127427 AGTTTGTGG-TACCATAGTC-AAAGTCCACACA
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* *
127458 AGTTGGTGGCAACATTTTCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
** *
127490 AGTTGAAGGCAACCTTTTCAAAAGCCCACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * ** *
127522 AGTTGATGGCAACATTTTC-AATGTGCAAACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * ** *
127553 AGTTGGTGTCAGCCATTTTTTAAAGCCCACACA
1 AGTTGGTGGCAACC-TTTTCAAAAGCCCACACG
* * **
127586 AGTTGATGGCAACCTTTTC-AATGTGCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
127617 AGTTGGTGGCAACCTTTTCAAAAGCCGAAAGGCCCATTAG
1 AGTTGGTGGCAACCTTTTCAAAAGCC------CACA--CG
* * ***
127657 AGTTGGTGGTAACCTTTTTAAAAGTTTACGA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCAC-ACG
*
127689 AGTTGGTGGTAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *** *
127721 AGTTAGTGATAACCTTTTC-AAAGTTAACACA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * ** *
127752 AGTTGTTGGCAGCCTTTTTAAAAGTGCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
127784 AGTTGGTGGCAACCTTTTCAAAAGTCTATGA-G
1 AGTTGGTGGCAACCTTTTCAAAAGCCCA-CACG
* *
127816 AGCTGGTCGCAACCTTTTCAAAAGCCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * **
127848 AGTTAGTGACAACCTTTTCAAAA-TCCACATA
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
127879 AGTTGTTGGCAACCTTTTCAAAAGCTCTTC-CA
1 AGTTGGTGGCAACCTTTTCAAAAGC-CCACACG
* * ** *
127911 AGTTGGTGACAATCTTTTCAAAATTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
127943 AGTTGATAGCAAACTTTTCAAAAGCTCATACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * * * *
127975 AGTTGGTGACATCCTTTT-GAAAGTCCACACC
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* ** *
128006 AGTTGTTGGCAATATTTTCAAAAGTCCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* * *
128038 AGTTGGTGGTAACCTTTTTAAAAGCTCACACG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
* *
128070 AGTTGCTGGCAA-CTTTTACAAAAACCCACACG
1 AGTTGGTGGCAACCTTTT-CAAAAGCCCACACG
* * * * * *
128102 AATTGGTGGTACCCTTTTTAAAAACCCACAGG
1 AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
*
128134 AGTTGGTGGTAACCTTTTCAAA
1 AGTTGGTGGCAACCTTTTCAAA
128156 GTTCACACGG
Statistics
Matches: 12613, Mismatches: 3513, Indels: 1534
0.71 0.20 0.09
Matches are distributed among these distances:
25 17 0.00
26 1 0.00
27 36 0.00
28 35 0.00
29 77 0.01
30 453 0.04
31 4044 0.32
32 6927 0.55
33 200 0.02
34 20 0.00
35 64 0.01
36 34 0.00
37 7 0.00
38 37 0.00
39 148 0.01
40 401 0.03
41 12 0.00
42 17 0.00
43 24 0.00
44 12 0.00
45 4 0.00
46 5 0.00
47 17 0.00
48 8 0.00
49 8 0.00
50 4 0.00
51 1 0.00
ACGTcount: A:0.31, C:0.21, G:0.19, T:0.28
Consensus pattern (32 bp):
AGTTGGTGGCAACCTTTTCAAAAGCCCACACG
Found at i:111514 original size:157 final size:156
Alignment explanation
Indices: 111269--119172 Score: 900
Period size: 158 Copynumber: 49.3 Consensus size: 156
111259 CATGAGTTGT
* * *
111269 TGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAGCCTTTTTAAAAGCCTACACGAGTTGAT
1 TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGAT
* * *
111334 GATAACATTTTTAAAAGCCCACACCAGTTGATGGTAACCTTTTCAATGTCCACATGAGTTGGTGG
65 GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTGG-GG
111399 CAACCTTTTCAAAGAACACACAAGTTAG
129 CAACCTTTTCAAAGAACACACAAGTTAG
* * * * * * *
111427 TGGCAACCATTTCAAAGTCCACATGAGTTGGTGGCAATCTTTTCAAAAGCTTGCACTAGTTGTTG
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGATG
* * * * **
111492 GCAGCTTTTTTAAAAGCTCACACGGGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTGGGGCA
66 ACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTGGGGCA
** *
111557 ACCTTTTCAAAGCCCACACGAGTTAG
131 ACCTTTTCAAAGAACACACAAGTTAG
* * * * * * *
111583 TGGTAACCTTTTCAAAGTCCACACGAGTTGGTGGTAACATTTT-AAGAAGCCCAAACTAGTTGGT
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAA-AAGCCTACACGAGTTGAT
* * * * * * * *
111647 GGCAACCA--TTTCAATGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CTCACACGATTTGG
65 GACAA-CATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTC-CACATGAGTTGG
* * * * * *
111709 TGGTAAACTTTTTAAAG-GCTTACACGAGTTGG
127 -GGCAACCTTTTCAAAGAAC--ACACAAGTTAG
* * * * * * * *
111741 TGGAAACCATTTCAAAATCCACACGAGTTGATAGAAACCTTTT-AGAAGTCCATA-A-GAGTTGG
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CC-TACACGAGTTGA
* * * * *
111803 TGGCAA-ACTTTTCAAAAGCCCAAAAGCCCACACGAGTTGGTGGCAACCATTTCAAAGTCCACAC
64 TGACAACA-TTTTTAAAAGCCC---A---CAC-C-AGTTGATGGCAACCTTTTCAAAGTCCACAT
** * * *
111867 GAGTTGGTGTTAACCTTTTCAAA-AGTCTACA-AATATTCG
120 GAGTTGG-GGCAACCTTTTCAAAGA-AC-ACACAA-GTTAG
* * * *
111906 TGGCAACCTTTTCAAAGTCCACACAAGTTGATGACAACCTTTTC-AAAGTCCATACA--AGTTGT
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CC-TACACGAGTTGA
* * * * * * * * * *
111968 TGGCAACCTTTTCAAAATG-CCATACGAGTTGGTGGTAACTTTTTCAAAATCTTACATGAGTTGG
64 TGACAACATTTTTAAAA-GCCCACACCAGTTGATGGCAACCTTTTCAAAGTC-CACATGAGTTGG
* * * * *
112032 TAGCAAACTTTTCAAA-ATCCCACAAGAGTTGG
127 -GGCAACCTTTTCAAAGAACACAC-A-AGTTAG
* * * ** * *
112064 TAGG-AACATTTTCAAAAGTCTATGA-GAGTTGGTCACAACCTTTTCAAAAGCCCATACGAGTTG
1 T-GGCAACCTTTTC-AAAGTCCA-CACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTG
* * * * * * * *
112127 GTGATAAC-TTTTTCAAAGTCCACACAAATTGTTGGCAACCTTTTCAAAAGCTAACACA--AGTT
63 ATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAG-T-CCACATGAGTT
* * ** *
112189 GGTGGCAACCTTTTCAAA-ATCTTGCATGAGTTGG
125 GG-GGCAACCTTTTCAAAGAAC--ACACAAGTTAG
* * * * *
112223 TGGTAACC-TTTCAAAATCCCACACGAGTTGGTAGCAACCTTTTCAAAAGCCTATA-GAAGTTGG
1 TGGCAACCTTTTCAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACG-AGTTGA
* ** * * * * * * * *
112286 CG-CTAAGC-TTTGCAAATGGCCATACGAGTTGGTGGCAACCTTTTCAAAAATCTACACGAGTTA
64 TGAC-AA-CATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCACATGAGTT-
** ** ** *
112349 ATGGCAACAATTTCAAAGTTCACACGAGTT-G
125 GGGGCAACCTTTTCAAAGAACACACAAGTTAG
* * * * *
112380 ATTGCAACC-TTTCAAAAGTCCACAAGAATTGGTGGCAAGCTTTTAAAAAGCCCAATAGCTCACA
1 -TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CC--TA---CAC-
* * * * * * * *
112444 TGAATTTG-TGGCAACCA--TTTCAAAGTCCACACGAGTTGGTGGCAACATTTTCAAAAGTCTAC
57 -G-AGTTGATGACAA-CATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCAC
* * ** ** *
112506 AAGAGTTGGTGGCAACCATTTTAAAAGCTCACAGGAGTTGG
118 ATGAGTTGG-GGCAACC-TTTTCAAAGAACACACAAGTTAG
* * * * * * *
112547 TGACAACCTTTTCAAAGTCCATACAAGTTGTTGGCAACCTTTT-TAAAGTCC-ACACAAGTTGTT
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CCTACACGAGTTGAT
** * * * ** * * * * * * *
112610 GACAACCCTTTCAAAATCTCACATGAGTTGGTGGCAACTTTTTTAAAATCCCACACGAATTGGTA
65 GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGT-CCACATGAGTTGG-G
** * *
112675 GCAACCTTTTCAAAGGCCCACACGAGTTGG
128 GCAACCTTTTCAAA-GAACACACAAGTTAG
* * * * * * * * *
112705 TGGTAACTTTTTCAAAAATCCACACGAGTTGGTGGCATCCTTTTTAAAAGCCCAGATGAGTTGGT
1 TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGAT
* * * **** * * * * * **
112770 GGCAACCTTTTTCAAATTTTACACGAGTTTG-TGGTAACATTTTCGAAAGCCCACACGAGTTATT
65 GACAACATTTTTAAAAGCCCACACCAG-TTGATGGCAACCTTTTC-AAAGTCCACATGAGTT-GG
* * * * *
112834 GGTAACATTTTCAAA-AGC-CACATGAGATGG
127 GGCAACCTTTTCAAAGAACACACA--AGTTAG
* * * * *
112864 TAGCAACCTTTTTAAAAG-CACACATGAGTTGATGGCAACCTTTT-AAAAGTCC-ACATGAGTTG
1 TGGCAACC-TTTTCAAAGTC-CACACGAGTTGGTGGCAACCTTTTCAAAAG-CCTACACGAGTTG
* * * * * * * * * *
112926 GTGGCAAC-CTTTTCAAAGCCCATACAAGTT-AGTGGAAACCATTTCAAAGTCCGCATAAGTTGG
63 ATGACAACATTTTTAAAAGCCCACACCAGTTGA-TGGCAACCTTTTCAAAGTCCACATGAGTTGG
** * *
112989 TGGCAATTTTTTCAAA-AGC-CTGTACTAGTT-G
127 -GGCAACCTTTTCAAAGAACAC---ACAAGTTAG
* * * * * ** *
113020 TTGGCAGCCTTTTTAAATGCCCACAAGGGTTGAAGGCAACCTTTTC-AAAGTCC-ACACAAGTTG
1 -TGGCAACCTTTTCAAA-GTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CCTACACGAGTTG
** ** * * * * * * * *
113083 GGGGTAAC-CTTTTCAAAGCCCACACGAGTTGGTGGCAACCTTTTAAAAAGCCCAAAAT-TGTTA
63 ATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTT-CAAAGTCC-ACATGAGTT-
* **
113146 GGGACAA-CTATTTCAAAGTCCACACAAGTT-G
125 GGGGCAACCT-TTTCAAAGAACACACAAGTTAG
* * * * *
113177 ATAGCAACCCTTTAAAAGTCCACAAGAGTTGGTGGCAAACTTTTCAAAAGCCTAAAAGCTCACAT
1 -TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCT---A---CAC--
* * ** * ** * * ** * * * *
113242 GAATTGGTGGTAACCA--TTTCAAAGTTCACACGAATTGGCGGTAACTTTTTCAAAAGTCTACAA
57 GAGTTGATGACAA-CATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCACAT
* ** ** *
113305 AAGTTCATGGCAACCTTTTCAAAGTCCACACGAGTT-G
120 GAGTT-GGGGCAACCTTTTCAAAGAACACACAAGTTAG
* * * *
113342 CTGGCAACCTTTTCAAAGTCCATACAAGTTGTTGGCAACCTTTTCAAAAGGCC-ACACGAGTTGG
1 -TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAA-GCCTACACGAGTTGA
** * * * * * ** * * * * *
113406 TGGTAACCTTTTCAAGATCTCACATGAGTTGGTAGCAAACTTTTCAAAATCCCACATGAGTTGAT
64 TGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGT-CCACATGAGTTG-G
* * * * *
113471 AGAAAACTTTTCAAA-ATCCACACAA-TTTG
127 GGCAACCTTTTCAAAGA-ACACACAAGTTAG
113500 TTGGCAACCTTTTCAAAGTCCAACATTTTCAGAAGTTCACATGAGTTGGTGGCAACCTTTTC-AA
1 -TGGCAACCTTTTCAAAGT----C-----C---A---CAC--GAGTTGGTGGCAACCTTTTCAAA
* * * * * * * * *
113564 AGTCC-ACATGAGTTGATGGCAACGTTTTCAAAAGCCCACACGATTTGGTGGCAGCCTTTTTTAA
48 AG-CCTACACGAGTTGATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACC-TTTTCAA
* * * * ** * *
113628 AGCCCACATGAGTTGATGACAACCTTTTTAAAGTTCACACGAGTTGG
111 AGTCCACATGAGTTG-GGGCAACCTTTTCAAAGAACACACAAGTTAG
* * * * *
113675 TGACAACCTTTTTAAAAGCCCAAAAGCCCACACGAGTTGGTAGCAAGCTTTTCAAAAGCCTACAT
1 TGGCAACC-TTTT-------C-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACAC
* * * * * * *
113740 GAGTT-AGTAATAACA-TTTTCAAAGTCAACA-CACGTTGTTGGCAACCTTTTCAAAAGCCCACA
57 GAGTTGA-TGACAACATTTTTAAAAGCCCACACCA-GTTGATGGCAACCTTTTC-AAAGTCCACA
* * * * * * *
113802 CGAGTTGGTGGTAACATTTTGAAA-ATCGCACACGAGTTGG
119 TGAGTTGG-GGCAACCTTTTCAAAGA--ACACACAAGTTAG
* ** * * * * *
113842 TTGCAACCTTTTCAAAAACC-CATAGAGTTGGTGACAACCTCTTC-AAAGTCC-ACACAAGTTGT
1 TGGCAACCTTTTCAAAGTCCACA-CGAGTTGGTGGCAACCTTTTCAAAAG-CCTACACGAGTTGA
* * ** * * * *
113904 TAGA-AACCTTTTCAAAAGCTTACACAAGTTGGTGGCAACCTTTTTAAAATCTCAC-TCGAGTTG
64 T-GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTC-CACAT-GAGTTG
* * *
113967 GTGGC-GCTCTTTTCAAA-ATCTA-ACATGAGTTGG
126 G-GGCAAC-CTTTTCAAAGAAC-ACACA--AGTTAG
* * * * * * *
114000 TAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAACCATTTCAAAAGCCCACATGAGTTGGT
1 TGGCAACCTTTTCAAA-GTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGAT
* * ** * ** * * * * *
114065 GGCAACCTTTGCAAAAGTCCACAGGAGTTGGTGGCAACATTTCCAAGAGCCCACAGGAGTTGGTG
65 GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAA-AGTCCACATGAGTTGG-G
* ** * * *
114130 GCAACCTTTACAAAGTTCACCCGAGTTTG
128 GCAACCTTTTCAAAGAACACACAAGTTAG
* ** * *
114159 TGGCACCCTAGTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAATCC-ACACGAGTTGGT
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTC-AAAAGCCTACACGAGTTGAT
** * * * * * * * * ** *
114223 GGTAAC-TATTTCATAGTCTACACGAGTTCATGCCAA-CAGTTCAAAAGTCCACAGGAGTTGGTG
65 GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCACATGAGTTGG-G
* * *
114286 GCAACTTTTTCAAAAGCCCAAAAGCCCTTACGAA-TTGG
128 GCAACCTTTTC-AAAG-----AA-CAC--AC-AAGTTAG
* * * * * * *
114324 TGGCAACCATTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGGTCTAGAAGAATTGGTG
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGATG
* * * * * * * * ** **
114389 GCAACCTTTTCAAAAGCCTAGACGAGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTGTTAGC
66 ACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTG-GGGC
* * *
114454 AACCTTTTCAAA-ATCCCACACGAGTTGG
130 AACCTTTTCAAAGA--ACACACAAGTTAG
* * * * *
114482 TGGTAACCTTTTCAAAATCACACACGAGTTGGTAGCAACCTTTGTCAAAA-CC-ATA-GAGTTGG
1 TGGCAACCTTTTCAAAGTC-CACACGAGTTGGTGGCAACCTTT-TCAAAAGCCTACACGAGTTGA
* * * * * * * *
114544 TGACAA-ACTTTTCAAA-CTCTACACAAGTTGTTAG-AAGCTTTTTCAAAAGTCCACACGAGTTA
64 TGACAACATTTTTAAAAGC-CCACACCAGTTGATGGCAA-CCTTTTC-AAAGTCCACATGAGTT-
* * * * ** *
114606 GTGACAACCTTTCCAACGTCCACACAAGTTGG
125 GGGGCAACCTTTTCAAAGAACACACAAGTTAG
* * * * * * * * * * *
114638 TGGCAGCTTTTTTAAAAGCCCACACAAGTTGGTGGCAA-CTTGTCCAAAATCCCACTCGATTTGG
1 TGGCAAC-CTTTTCAAAGTCCACACGAGTTGGTGGCAACCTT-TTCAAAAGCCTACACGAGTTGA
* * * * ** * * * ** * *
114702 TCG-TAACCTTTTCAAAATCTGACACGAGTAGGTAACAACC-TTTCAAAGACCCACACGAGTTGG
64 T-GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAG-TCCACATGAGTTGG
* * * * *
114765 TGGTAACCATTTCAAA-AGCTCACATGAGTTGG
127 -GGCAACCTTTTCAAAGAACACACA--AGTTAG
* * * * * * * *
114797 TGGCAACCTTTGCAAAAGGCCACACGAGTTGGTGACAACCTTTTCAAGAG-CTCATAGGAGTCGG
1 TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCT-ACACGAGTTGA
* * ** * * * * * * **
114861 TGACAACCTTTTCAAAAATCCACACAAGTT-AGTTGTAA-C-TATAAAAGTCCACACGAGTTAAT
64 TGACAACATTTTTAAAAGCCCACACCAGTTGA-TGGCAACCTTTTCAAAGTCCACATGAGTT-GG
* * ** *
114923 GCCAACCTTTTAAAAGTCCACA-AGAGTTGG
127 GGCAACCTTTTCAAAGAACACACA-AGTTAG
* * * * * *
114953 TGGCAACCTTTTCAAAAGCCCAAAAGCCCACACGAATTAGTGACAACCATTTC-AAAGTCC-ATA
1 TGGCAACCTTTT--------C-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CCTACA
* * * * * * * * ** * *
115016 TGGGTTGGTGACAACCTTTTCAAAAGTCTAGAAGAGTTGGTGGCAA-CTATTTCAAAATCCTACA
56 CGAGTTGATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCT-TTTCAAAGTCC-ACA
* * * * * *
115080 CGAGTTGGTAGCAACCTTTTCAAAG-GCCCATATGAGTTGG
119 TGAGTTGG-GGCAACCTTTTCAAAGAACACACA--AGTTAG
* * * * * * *
115120 TGGTAACCTTTTCAAAATCCCACATGAGTTGGTGGAAAACTTTTCAAAATCAC-ACACGAGTTGG
1 TGGCAACCTTTTCAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAGC-CTACACGAGTTGA
* * * * * ** **
115184 TGGCAACCTTTTCAAAA-TCCACACAAGTTTTTGGCAACCTTTTCCAAAG-CTCACGCGAGTTGG
64 TGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTT-CAAAGTC-CACATGAGTTGG
* ** *
115247 TAGCAACCTTTTCAAAGGTC-CACATGAGTTGG
127 -GGCAACCTTTTCAAAGAACACACA--AGTTAG
* * * * * * ** *
115279 TGGGAACCTTTTCAAAAGTCCACACTAGTGGGTAGCAACC-TTTCCAAAGCCCACAAAAGTTGTT
1 TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGAT
* * * ** * * * *
115343 GGCAACCTTTTCAAAAG-CCACATGAGTTG-TGACATCC-TTTCAAAATCCTACATGAGTTGGTA
65 GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCC-ACATGAGTTGG-G
* * * *
115405 GCAACCTTTTCAAA-AGCCTGCACGAGTTGG
128 GCAACCTTTTCAAAGA-AC-ACACAAGTTAG
** * * * * * * * * *
115435 TGTTAAGCTTTGCAAATGGCCACACAAGTTGGTGGCAACTTTTTC-AAAGCCCAAATGAGTTGTT
1 TGGCAACCTTTTCAAA-GTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGAT
** * * ** ** * * * * *
115499 GGTAACCTTTTCAAAAGCTGACAGGAGTTGGTGGCAACCTTTTCAAAAATCTACACGAGTTGGTA
65 GACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCACATGAGTTGG-G
* *** *
115564 GCAACTTTTTCAAA-AATTCACATGTGTTGG
128 GCAACCTTTTCAAAGAA--CACACAAGTTAG
* * * * * * *
115594 TGGCAA-CTATTTTAAAGTCCACACGTGTTGCTAGAAACC-TTTCAAAAATCCGTA-A-AAGTTG
1 TGGCAACCT-TTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTC-AAAAGCC-TACACGAGTTG
* * * * * * * * *
115655 CTGGCAACCATTTTAATAGCCCAAAAGTCCACACAAATTGGTAGCAACCATTTCAAAGCCCACAT
63 ATGACAA-CATTTT--T-----AAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACAT
* * * *
115720 GAGTTGGTGGTAACTTTTTCAAA-AGTCTACA-ATAGTTGG
120 GAGTTGG-GGCAACCTTTTCAAAGA-AC-ACACA-AGTTAG
* * * ** *
115759 TGGCAAACTTTTCAAAAGTCCACATGAGTTAGCAGCAACC-TTT----AG-CTCACACTAGTT-A
1 TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCT-ACACGAGTTGA
* ** * * * * * * *
115817 GCGGTAAC-TTTTGGAGAAA-CCCACACGAGTTGGTGGTAACCTTTTTAAAAGCCCACAGGAGTT
64 -TGACAACATTTT-TA-AAAGCCCACACCAGTTGATGGCAACC-TTTTCAAAGTCCACATGAGTT
* ** ** *
115880 AGTGGTTACCTTTTCAAAGTTCACACGAGGTT-G
125 -GGGGCAACCTTTTCAAAGAACACAC-AAGTTAG
** * * * * * ** *
115913 TGGC-ACCATAGTCAAAGTCTATACGAGTTGGTAGTAACTTTTTCAAAAGCCTACACTTGTTGGT
1 TGGCAACC-TTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGAT
* * * * * * * *
115977 -AGTAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCATTTCAAAGTCCACACGAGTTGATG
65 GA-CAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTG-GG
* *
116041 GCAACC-TTTCAAA-AGTCTACA-AGAGTTGG
128 GCAACCTTTTCAAAGA-AC-ACACA-AGTTAG
* * * * ** *
116070 TGGCAACTTTTTTAAAAGCCCAAAAGCCCACAAGATTTGGAAGCAA-CTATTTC-AATGTCC-AC
1 TGGCAAC-CTTTT-------C-AAAGTCCACACGAGTTGGTGGCAACCT-TTTCAAAAG-CCTAC
* ** * * * * ** * * * *
116132 ACGAGTTGGTGGTAACCTTTTGAAAAGTCTACAAGAGCT-AGGGGCAACTTTTTCAAAAGCCCAC
55 ACGAGTTGATGACAACATTTTTAAAAGCCCACACCAGTTGA-TGGCAACCTTTTC-AAAGTCCAC
* ** *
116196 ACGAGTTGGTAACAACCTCTTT-AAAG-TCTACACAAGTT-G
118 ATGAGTTGG-GGCAACCT-TTTCAAAGAAC-ACACAAGTTAG
* * * ** * * *
116235 TTGGCAACCTTTTTTTAAAAAGCCCACACGAGTTAGTAACAACCTTTTC-AAAGTCAACA-TATG
1 -TGGCAACC---TTTT-CAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGA-G
* * * ** * * * * *
116298 TTG-TTAGCAACCTTTTCAAAAGCCCACATGAGTTGGTAGTAACTTTTTCAAAATCACACATGAG
60 TTGATGA-CAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTC-CACATGAG
* * *
116362 TTGGTAGCAACCTTTTCAAA-AAGCACA-GAGTTGG
123 TTGG-GGCAACCTTTTCAAAGAA-CACACAAGTTAG
* * * * * * * ** * *
116396 TGACAACCTTTCCAAAATCCTACTCAAGTTGGTCGCAACATTTTCAAAA-TTTGACATGAGTTGG
1 TGGCAACCTTTTCAAAGTCC-ACACGAGTTGGTGGCAACCTTTTCAAAAGCCT-ACACGAGTTGA
* * * * * * * * *
116460 T-AGCAAC-CTTTCAAAGGCCCACACAAGTTGGTGGTAACCATTTCAAAAGCCCACACGAGTTAG
64 TGA-CAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCACATGAGTT-G
* * * * * * *
116523 TGGTAACCATTTCAAA-AGCCCACATGGGTTGG
126 GGGCAACCTTTTCAAAGAACACACA--AGTTAG
* * * * *
116555 TGGCAACCTTTT-AAAGAGCTCACAAGAGTTGGTGGCAACCTTTTCAAGAG-CTCATAGGAGTTG
1 TGGCAACCTTTTCAAAG-TC-CACACGAGTTGGTGGCAACCTTTTCAAAAGCCT-ACACGAGTTG
* * * * ** *** * *
116618 GTGGCAACCTTTTCAAAAATCCACATGTGTT-AGTGGTAA-CTATTTCAAAGTCTACACT-AGTT
63 ATGACAACATTTTTAAAAGCCCACACCAGTTGA-TGGCAACCT-TTTCAAAGTCCACA-TGAGTT
*** ** * *
116680 AATGCTAACC-TTTCAAAAGTCCATA-ATAGTTGG
125 GGGGC-AACCTTTTC-AAAGAACACACA-AGTTAG
* * *
116713 TGGTAACCTTTTCAAAAG-CCTACGA-GAGTTGGTCGTAACCTTTTCAAAAGCCTACTTAAAGTC
1 TGGCAACCTTTTC-AAAGTCC-AC-ACGAGTTGGTGGCAACCTTTTCAAAAG-C--C-T--A---
* * * * * * * ** * * *
116776 CACATAAGTTGTTGGCAACCTTTTCAAAAACTCACATAAGTTGGTGGAAACCTTTTCAAAATCCC
54 CAC--GAGTTGATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGT-CC
** * ** *
116841 ACATGAGTTGATAGCAACCCTTTCAAAAGTTCACACGAGTT-G
116 ACATGAGTTG-GGGCAACCTTTTC-AAAGAACACACAAGTTAG
* * ** * * ** * * * *
116883 CTGACAACCCTTTCAAAGTCCACATAAGTTGTTTGCAATATTTTCAGATGCCTACACAAGTTGGT
1 -TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGAT
** * * * * * * * *
116948 G-GTA-ATCTTTTCAATGCCTACACGAGTTGTTGGCAACCTTTTTAAAATCTCACACGAGTTGGT
65 GACAACAT-TTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTC-CACATGAGTTGG-
* * * * *
117011 GGTAACCTTTTTAAA-AGCTCGCATGAGTTAG
127 GGCAACCTTTTCAAAGAACACACA--AGTTAG
* * * * ** * * *
117042 TGGTAACCTTTTCCAAGTTCACACGAGTTTGTGGC-ACCATAGTC-AAAGTCTACACAAGTTGGT
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACC-TTTTCAAAAGCCTACACGAGTTGAT
* * * * * * * *
117105 -AGTAACTTTTTTAAAAGCCTACA-TATGCTGCTGGTAACCTTTTCAAAAG-CCACACGAGTTGG
65 GA-CAACATTTTTAAAAGCCCACACCA-GTTGATGGCAACCTTTTC-AAAGTCCACATGAGTTGG
* * ** *
117167 TGACAACCATTTCAAAGTCCACACGAGTT-G
127 -GGCAACCTTTTCAAAGAACACACAAGTTAG
* * * *
117197 ATGGCAACC-TTTCAAAAGTCTACAAGAGTTTGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACA
1 -TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG-CC--TA---CAC-
* * * * * * * *
117261 AGAGTTGGAAG-CAAC-TATTTT-AATGTCCATACGAGTTGGTGGCAACCTTTTGAAAAGTCTAC
57 -GAGTT-GATGACAACAT-TTTTAAAAGCCCACACCAGTTGATGGCAACCTTTT-CAAAGTCCAC
* * * * ** * *
117323 AAGAGTTAGGGTCCATCTTTTCAAAAGCCCACACGAGTTGG
118 ATGAGTT-GGGGCAACCTTTTC-AAAGAACACACAAGTTAG
** * * * * * *
117364 TAACAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACCTTTTTTTAAAAAGCCCACATGAGTT-
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACC---TTTTCAAAAGCCTACACGAGTTG
* * * * * * ** * *
117428 AGTAATAAC-CTTTTCAAAGTCAACATAAGTTGTTAGCAACCTTTTCAAAAGTCCACATGAGTTG
63 A-TGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCACATGAGTTG
* * * *
117492 GTAGTAACCTTTTCAAA-ATCACACACGAGTTGG
126 G-GGCAACCTTTTCAAAGA--ACACACAAGTTAG
* ** * * * *
117525 TAGCAACCTTTTCAAAAACCACA-GAGTTGGTGACAACCTTTTC-AAA-CTTTACACAAGTTGTT
1 TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGC-CTACACGAGTTGAT
* * * * * * * * * *
117587 AAAAAC-TTTTTCAAAAGTCCACACGAGTTAATGACAACCTTTTCAATGTCCACATAACTTGTTG
65 GACAACATTTTT-AAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTG-GG
*
117651 GCAACCTTTTCAAA-AACCCACACAAGTTGG
128 GCAACCTTTTCAAAGAA--CACACAAGTTAG
* * * * * * *
117681 TGGCAACCATTCCAAAATCCCACTCGAGTTGGTCGCAACCTTTTCAAAA-TCTAACACGAGTTGG
1 TGGCAACCTTTTCAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAGCCT-ACACGAGTTGA
* * * * * * *
117745 T-AGCAAC-CTTTCAAAGGCCCACACGAGTTGGTGGTAA-CTATTTCAAAATCCCACATGAGTTG
64 TGA-CAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCT-TTTCAAAGT-CCACATGAGTTG
* ** * *
117807 GTGGCAACCTTTGCCAAAGTCCACACGAGTTGG
126 G-GGCAACCTTT-TCAAAGAACACACAAGTTAG
* * * * * *
117840 TGGCAACCTTTTCAAAAGTCTAAAAGAGTTGGTGGCAATCATTTCAAAAG-CTCATACGAGTT-A
1 TGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCT-ACACGAGTTGA
* * * ** * * * *
117903 -GTAGCAACCTTTTCAAAGGCCCACATGAG-TCAGTGGGAATCTTTTCAAAAGTCCACACGAGTT
64 TG-A-CAACATTTTTAAAAGCCCACACCAGTTGA-TGGCAACCTTTTC-AAAGTCCACATGAGTT
* * ** **
117966 GGTAGCAACATTTTCAAAGCCCACATGAGTT-G
125 GG-GGCAACCTTTTCAAAGAACACACAAGTTAG
* ** *
117998 TTGGCAACCTTTTCAAAAG-CCTACATGAGTTGGTAACAACC-TTTCAAAATCCTACACGAGTTG
1 -TGGCAACCTTTTC-AAAGTCC-ACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTG
* * * * * * * * * **
118061 GT-AGCAACCTTTTCAAAAGCCTACACGAGTTGGTGGTAAGCTTTGT-AAATGGCCACACAAGTT
63 ATGA-CAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTT-TCAAA-GTCCACATGAGTT
** ** * ** *
118124 GGTGGCAAATTTTTCAAAGCCCAAATGAGTTAT
125 GG-GGCAACCTTTTCAAAGAACACACAAGTTAG
** * ** * *
118157 TGGCAACCTTTTCAAAACCCGACAGGAGTTGGTGGTTACCTTTTCAAAAATCC-ACACGAGTTGG
1 TGGCAACCTTTTCAAAGTCC-ACACGAGTTGGTGGCAACCTTTTC-AAAAGCCTACACGAGTTGA
** * * *** * * * *
118221 TGGGAACCTTTTCAAAAATTCACACGAGTTGGTGGTAA-CTATTTCAAAGTCCACATGAGTTGAT
64 TGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCT-TTTCAAAGTCCACATGAGTTG-G
* * * * *
118285 AGCAACC-TTTCAAA-AGTCTATAAAAGTTGG
127 GGCAACCTTTTCAAAGA-AC-ACACAAGTTAG
* * * * * *
118315 TGGCAACCTTTTTAATAGCCCAAAAGCCCACACAAATTGGTGGTAACCATTTC-AAAGCCCACAC
1 TGGCAACC--TTT--T----C-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACAC
* * * ** ** * * * * *
118379 GAGTTGATGATAACTTTTTTAAAAGTCTTCAAGAGTTGGTAGCAACTTTTTCAAAAGCCCACGTG
57 GAGTTGATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTC-AAAGTCCACATG
** * *
118444 AGTTAGGACCAACCTTTTCAAA-ATCTCACATGAG-TAG
121 AGTT-GGGGCAACCTTTTCAAAGAACACACA--AGTTAG
* * * * * * * *
118481 ATGGCAACATTTTTAAAATCCCATATGAGTTGGTAGCAACCTTTTC-AAAGGCTCACATGAGTTG
1 -TGGCAACCTTTTCAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAGCCT-ACACGAGTTG
** ** * * * * * ** * ** * * *
118545 GCGGTAACCTTTTCAGAAGTCCATATGAGTTGGTGATAACATTTTCAAAG-CCACACGAGTTGTT
63 ATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTG-G
* * * *
118609 GTCAACCTTTTCAAA-AGC-CTACGTGAGTTGG
127 GGCAACCTTTTCAAAGAACAC-AC--AAGTTAG
* * * * **
118640 TGGAAACTTTTTC-AACTACCTACACAAGTTGGTGGCAACCTTTTC-AAAGTGTACACGAGTT-A
1 TGGCAACCTTTTCAAAGT-CC-ACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGA
** * *** * * * * * *
118702 GTGGTAAC-CTTTTAAAAGGTTGACACGAGTTGGTGGTAATCATTTCAAAGTCCACACGAGTTGA
64 -TGACAACATTTTTAAAA-GCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTG-
** * * *
118766 TAGCAACC-TTTCAAAACCCCAAAAGCCTACACGAGTTGG
126 GGGCAACCTTTTC--AA----AGAA--C-ACACAAGTTAG
* * ** *
118805 TGGTAACCTTTTCAAAAGTCTACGA-GAGTTGGTCACAACCTTTTCAAAAGCCCACACGAGTTGA
1 TGGCAACCTTTTC-AAAGTCCAC-ACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGA
* * * ** * *
118869 TAACAACCTTTTT-AAAGTCCACATAAGTT-ATTGGCAACCTTTCCAAAAGCTCATACA--AGTT
64 TGACAACATTTTTAAAAGCCCACACCAGTTGA-TGGCAACCTTTTC-AAAG-TC-CACATGAGTT
* * ** *
118930 AGTGGCAACCTTTTCAAA-ATCTACATGAGTTGG
125 -GGGGCAACCTTTTCAAAGAAC-ACACAAGTTAG
* * * **
118963 TAGCAACCTTTTCAAAAG-CTCACAGGAGTTGGTGACAACCTTTTC-AAAGTCC-ACATAAGTTG
1 TGGCAACCTTTTC-AAAGTC-CACACGAGTTGGTGGCAACCTTTTCAAAAG-CCTACACGAGTTG
* * * * * * *
119025 TTGGCAACATTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAG-CCTACACGAGTTGT
63 ATGACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCC-ACATGAGTTG-
* * * ** * *
119089 TGACAACCTTTTTAAAAGCTCACACGAGTTGG
126 GGGCAACC-TTTTCAAAGAACACACAAGTTAG
* * * * *
119121 TGGTAA-CTTTTACAAAAAG-CCACACAAGTTAGTGGTAACCTTTTTAAAAGCC
1 TGGCAACCTTTT-C--AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCC
119173 CATAGGAGTT
Statistics
Matches: 5809, Mismatches: 1390, Indels: 1094
0.70 0.17 0.13
Matches are distributed among these distances:
153 21 0.00
154 33 0.01
155 102 0.02
156 508 0.09
157 780 0.13
158 1292 0.22
159 887 0.15
160 412 0.07
161 207 0.04
162 17 0.00
163 54 0.01
164 74 0.01
165 571 0.10
166 463 0.08
167 122 0.02
168 16 0.00
169 56 0.01
170 39 0.01
171 32 0.01
173 3 0.00
174 82 0.01
175 32 0.01
179 1 0.00
182 1 0.00
183 4 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (156 bp):
TGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCTACACGAGTTGATG
ACAACATTTTTAAAAGCCCACACCAGTTGATGGCAACCTTTTCAAAGTCCACATGAGTTGGGGCA
ACCTTTTCAAAGAACACACAAGTTAG
Found at i:111875 original size:71 final size:71
Alignment explanation
Indices: 111759--111891 Score: 169
Period size: 71 Copynumber: 1.9 Consensus size: 71
111749 ATTTCAAAAT
* *
111759 CCACACGAGTTGATAGAAACCTTTTAGAAGTCCATAAGAGTTGGTGGCAAACTTTTCAAAAGCCC
1 CCACACGAGTTGATAGAAACCTTTCAGAAGTCCACAAGAGTTGGTGGCAAACTTTTCAAAAGCCC
111824 AAAAGC
66 AAAAGC
* * * * ** *
111830 CCACACGAGTTGGTGGCAACCATTTCA-AAGTCCACACGAGTTGGTGTTAACCTTTTCAAAAG
1 CCACACGAGTTGATAGAAACC-TTTCAGAAGTCCACAAGAGTTGGTGGCAAACTTTTCAAAAG
111892 TCTACAAATA
Statistics
Matches: 52, Mismatches: 9, Indels: 2
0.83 0.14 0.03
Matches are distributed among these distances:
71 48 0.92
72 4 0.08
ACGTcount: A:0.33, C:0.23, G:0.20, T:0.24
Consensus pattern (71 bp):
CCACACGAGTTGATAGAAACCTTTCAGAAGTCCACAAGAGTTGGTGGCAAACTTTTCAAAAGCCC
AAAAGC
Found at i:111937 original size:165 final size:166
Alignment explanation
Indices: 111664--111984 Score: 404
Period size: 165 Copynumber: 1.9 Consensus size: 166
111654 ATTTCAATGT
* * *
111664 CCACACGAGTTGGTGGCAACCTTTTCAAAAGCTCACACGATTTGGTGGTAAACTTTTTAAAGGCT
1 CCACACGAGTTGGTGGCAACCATTTCAAAAGCTCACACGAGTTGGTGGTAAACTTTTAAAAGGCT
* * * *
111729 TACACGAGTTGGTGGAAACCATTTCAAAATCCACACGAGTTGATAGA-AACCTTTT-AGAAGTCC
66 TACACAAATTCGTGGAAACCATTTCAAAATCCACACAAGTTGAT-GACAACCTTTTCA-AAGTCC
111792 ATA-AGAGTTGGTGGCAAACTTTTCAAAAGCCCAAAAGC
129 ATACA-AGTTGGTGGCAAACTTTTCAAAAGCCCAAAAGC
* * *
111830 CCACACGAGTTGGTGGCAACCATTTC-AAAG-TCCACACGAGTTGGTGTTAACCTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCATTTCAAAAGCT-CACACGAGTTGGTGGTAAACTTTT-AAAAGG
* * *
111893 C-TACA-AATATTCGTGGCAACCTTTTCAAAGTCCACACAAGTTGATGACAACCTTTTCAAAGTC
64 CTTACACAA-ATTCGTGGAAACCATTTCAAAATCCACACAAGTTGATGACAACCTTTTCAAAGTC
* *
111956 CATACAAGTTGTTGGCAACCTTTTCAAAA
128 CATACAAGTTGGTGGCAAACTTTTCAAAA
111985 TGCCATACGA
Statistics
Matches: 134, Mismatches: 15, Indels: 13
0.83 0.09 0.08
Matches are distributed among these distances:
164 4 0.03
165 98 0.73
166 32 0.24
ACGTcount: A:0.32, C:0.22, G:0.18, T:0.27
Consensus pattern (166 bp):
CCACACGAGTTGGTGGCAACCATTTCAAAAGCTCACACGAGTTGGTGGTAAACTTTTAAAAGGCT
TACACAAATTCGTGGAAACCATTTCAAAATCCACACAAGTTGATGACAACCTTTTCAAAGTCCAT
ACAAGTTGGTGGCAAACTTTTCAAAAGCCCAAAAGC
Found at i:112063 original size:64 final size:63
Alignment explanation
Indices: 111830--125695 Score: 4054
Period size: 63 Copynumber: 217.0 Consensus size: 63
111820 GCCCAAAAGC
* * ** *
111830 CCACACGAGTTGGTGGCAACCATTTCAAAGT-CCACACGAGTTGGTGTTAACCTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * * *
111893 CTACA-AATATTCGTGGCAACCTTTTCAAAGT-CCACACAAGTTGATGACAACCTTTTCAAAGT
1 CCACACGA-GTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * *
111955 CCATACAAGTTGTTGGCAACCTTTTCAAAATGCCATACGAGTTGGTGGTAACTTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * *
112018 CTTACATGAGTTGGTAGCAAACTTTTCAAAATCCCACAAGAGTTGGTAGG-AACATTTTCAAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGT-GGCAACTTTTTCAAAA-
112082 T
63 T
* * ** * * ** *
112083 CTATGA-GAGTTGGTCACAACCTTTTCAAAAGCCCATACGAGTTGGTGATAACTTTTTCAAAGT
1 CCA-CACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * ** * *
112146 CCACACAAATTGTTGGCAACCTTTTCAAAAGCTAACACAAGTTGGTGGCAACCTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * * *
112209 CTTGCATGAGTTGGTGGTAACC-TTTCAAAATCCCACACGAGTTGGTAGCAACCTTTTCAAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * *
112272 CCTATA-GAAGTTGG-CGCTAAGCTTTGC-AAATGGCCATACGAGTTGGTGGCAACCTTTTCAAA
1 CC-ACACG-AGTTGGTGGC-AACCTTTTCAAAAT-CCCACACGAGTTGGTGGCAACTTTTTC-AA
112334 AAT
61 AAT
* ** ** * * * * *
112337 CTACACGAGTTAATGGCAACAATTTCAAAGT-TCACACGAGTTGATTGCAAC-CTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * **
112399 CCACAAGAATTGGTGGCAAGCTTTTAAAAAGCCCAATAGCTCACATGAATTTGTGGCAACCATTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCC---A---CAC--GAGTTGGTGGCAACTTTTT
*
112464 CAAAGT
58 CAAAAT
* * * * *
112470 CCACACGAGTTGGTGGCAACATTTTCAAAAGT-CTACAAGAGTTGGTGGCAACCATTTT-AAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * * * * *
112533 CTCACAGGAGTTGGTGACAACCTTTTCAAAGT-CCATACAAGTTGTTGGCAACCTTTTT-AAAGT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * * * * *
112596 CCACACAAGTTGTTGACAACCCTTTCAAAATCTCACATGAGTTGGTGGCAACTTTTTTAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * ** *
112659 CCCACACGAATTGGTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAACTTTTTCAAAAAT
1 -CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * * *
112724 CCACACGAGTTGGTGGCATCCTTTTTAAAAGCCCAGATGAGTTGGTGGCAACCTTTTTCAAATT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
** * * * * * ** * * *
112788 TTACACGAGTTTGTGGTAACATTTTCGAAAGCCCACACGAGTTATTGGTAACATTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * * *
112851 CCACATGAGATGGTAGCAACCTTTTTAAAAGCACACATGAGTTGATGGCAACCTTTT-AAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * ** *
112914 CCACATGAGTTGGTGGCAACCTTTTC-AAAGCCCATACAAGTTAGTGGAAACCATTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* ** ** * *** * * *
112976 CCGCATAAGTTGGTGGCAATTTTTTCAAAAGCCTGTACTAGTTGTTGGCAGCCTTTTT--AAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCA-ACTTTTTCAAAAT
* * ** * * * * * **
113038 GCCCACAAGGGTTGAAGGCAACCTTTTCAAAGT-CCACACAAGTTGGGGGTAACCTTTTCAAAGC
1 --CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * *** * * *
113102 CCACACGAGTTGGTGGCAACCTTTTAAAAAGCCCAAAATTGTTAGG-GACAACTATTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTT-GGTGGCAACTTTTTCAAAAT
* * * * *
113165 CCACACAAGTTGATAGCAACCCTTT-AAAAGT-CCACAAGAGTTGGTGGCAAAC-TTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGC-AACTTTTTCAAAA-
113227 CCT
63 --T
* * * * * * * * *
113230 AAAAGCTCACATGAATTGGTGGTAACCATTTCAAAGT-TCACACGAATTGGCGGTAACTTTTTCA
1 -----C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCA
113294 AAAGT
60 AAA-T
* ** ** * * * *
113299 CTACAAAAGTTCATGGCAACCTTTTCAAAGT-CCACACGAGTTGCTGGCAACCTTTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** * * *
113361 CCATACAAGTTGTTGGCAACCTTTTCAAAAGGCCACACGAGTTGGTGGTAACCTTTTCAAGAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * **
113424 CTCACATGAGTTGGTAGCAAACTTTTCAAAATCCCACATGAGTTGATAGAAAAC-TTTTCAAAAT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGT-GGCAACTTTTTCAAAAT
* * * *
113488 CCACACAATTTGTTGGCAACCTTTTCAAAGTCCAACATTTTCAGAAGTTCACATGAGTTGGTGGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCC--CA----C---A-----C--GAGTTGGTGGC
* *
113553 AACCTTTTCAAAGT
50 AACTTTTTCAAAAT
* * * * * * * **
113567 CCACATGAGTTGATGGCAACGTTTTCAAAAGCCCACACGATTTGGTGGCAGCCTTTTTTAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCA-ACTTTTTCAAAAT
* * * * * * *
113631 CCACATGAGTTGATGACAACCTTTTTAAAGT-TCACACGAGTTGGTGACAACCTTTTTAAAAGCC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTT-------
*
113695 CAAAAGC
58 CAAAA-T
* * * * * * *** * *
113702 CCACACGAGTTGGTAGCAAGCTTTTCAAAAGCCTACATGAGTTAGTAATAACATTTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * *
113765 CAACAC-ACGTTGTTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGTAACATTTTGAAAAT
1 CCACACGA-GTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * *
113828 CGCACACGAGTTGGTTGCAACCTTTTCAAAAACCCATA-GAGTTGGTGACAACCTCTTCAAAGT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * ** *
113891 CCACACAAGTTGTTAGAAACCTTTTCAAAAGCTTACACAAGTTGGTGGCAACCTTTTT-AAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * ** * * * *
113954 CTCACTCGAGTTGGTGGC-GCTCTTTTCAAAATCTAACATGAGTTGGTAGCAACCTTTTCAAAGG
1 C-CACACGAGTTGGTGGCAAC-CTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAA-A
*
114018 C
63 T
* * * * * *
114019 CCACACGAGTTGGTGGTAACCATTTCAAAAGCCCACATGAGTTGGTGGCAACCTTTGCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * *
114083 CCACAGGAGTTGGTGGCAACATTTCCAAGAGCCCACAGGAGTTGGTGGCAACCTTTACAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * ** * *
114146 TCACCCGAGTTTGTGGCACCCTAGTCAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * ** * **
114209 CCACACGAGTTGGTGGTAA-CTATTTCATAGT-CTACACGAGTTCATGCCAAC-AGTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * **
114271 CCACAGGAGTTGGTGGCAACTTTTTCAAAAGCCCAAAAGCCCTTACGAATTGGTGGCAACCATTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCC---A---C--ACGAGTTGGTGGCAACTTTTT
*
114336 CAAAGT
58 CAAAAT
* * * * * * *
114342 CCACACGAGTTGGTGGCAACCTTTTCAAAGGT-CTAGAAGAATTGGTGGCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAA-ATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * *
114405 CCTAGACGAGTTGGTGACAACCTTTTCAAAGT-CCACACAAGTTGTTAGCAACCTTTTCAAAAT
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * *
114468 CCCACACGAGTTGGTGGTAACCTTTTCAAAATCACACACGAGTTGGTAGCAACCTTTGTCAAAA-
1 -CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * * * * * *
114532 CCATA-GAGTTGGTGACAAACTTTTCAAACT-CTACACAAGTTGTTAG-AAGCTTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAA-T
* * * ** * * * *
114594 CCACACGAGTTAGTGACAACCTTTCCAACGT-CCACACAAGTTGGTGGCAGCTTTTTTAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * *
114657 CCACACAAGTTGGTGGCAA-CTTGTCCAAAATCCCACTCGATTTGGTCGTAACCTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTT-TTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * ** * ** *
114720 CTGACACGAGTAGGTAACAACC-TTTCAAAGA-CCCACACGAGTTGGTGGTAACCATTTCAAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAA-ATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * ** * * * *
114783 CTCACATGAGTTGGTGGCAACCTTTGCAAAAGGCCACACGAGTTGGTGACAACCTTTTCAAGAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * * *
114847 CTCATAGGAGTCGGTGACAACCTTTTCAAAAAT-CCACACAAGTTAGTTGTAAC--TAT-AAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTC-AAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-
114908 T
63 T
** * *
114909 CCACACGAGTTAATGCCAACCTTTT-AAAAGT-CCACAAGAGTTGGTGGCAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAA-CTTTT-------
* *
114972 CCAAAAGC
57 TCAAAA-T
* * * * * * * * * *
114980 CCACACGAATTAGTGACAACCATTTCAAAGT-CCATATGGGTTGGTGACAACCTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * **
115043 CTAGAAGAGTTGGTGGCAA-CTATTTCAAAATCCTACACGAGTTGGTAGCAACCTTTTCAAAGGC
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAA-AT
* * * * *
115107 CCATATGAGTTGGTGGTAACCTTTTCAAAATCCCACATGAGTTGGTGGAAAAC-TTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGG-CAACTTTTTCAAAAT
* ** * * *
115170 CACACACGAGTTGGTGGCAACCTTTTCAAAAT-CCACACAAGTTTTTGGCAACCTTTTCCAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * *
115233 CTCACGCGAGTTGGTAGCAACCTTTTCAAAGGT-CCACATGAGTTGGTGGGAACCTTTTCAAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAA-ATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-
115297 T
63 T
* * * * * ** * * *
115298 CCACACTAGTGGGTAGCAACC-TTTCCAAAGCCCACAAAAGTTGTTGGCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
115360 CCACATGAGTT-GTGACATCC-TTTCAAAATCCTACATGAGTTGGTAGCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* ** * * * * **
115421 CCTGCACGAGTTGGTGTTAAGCTTTGC-AAATGGCCACACAAGTTGGTGGCAACTTTTTCAAAGC
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAAT-CCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * ** * *
115485 CCAAATGAGTTGTTGGTAACCTTTTCAAAAGCTGACAGGAGTTGGTGGCAACCTTTTCAAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * * * *
115549 CTACACGAGTTGGTAGCAACTTTTTCAAAAAT-TCACATGTGTTGGTGGCAACTATTTT-AAAGT
1 CCACACGAGTTGGTGGCAACCTTTTC-AAAATCCCACACGAGTTGGTGGCAACT-TTTTCAAAAT
* * * * * * *
115612 CCACACGTGTTGCTAGAAACC-TTTCAAAAATCCGTA-A-AAGTTGCTGGCAACCATTTTAATAG
1 CCACACGAGTTGGTGGCAACCTTTTC-AAAATCC-CACACGAGTTGGTGGCAA-C-TTTT--T--
115674 CCCAAAAGT
58 --CAAAA-T
* * * * * * *
115683 CCACACAAATTGGTAGCAACCATTTC-AAAGCCCACATGAGTTGGTGGTAACTTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* ** * * * ** * **
115746 CTACAATAGTTGGTGGCAAACTTTTCAAAAGT-CCACATGAGTTAGCAGCAAC-CTTT--AGCT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * *
115806 -CACACTAGTTAGCGGTAA-CTTTTGGAGAAA-CCCACACGAGTTGGTGGTAACCTTTTT-AAAA
1 CCACACGAGTTGGTGGCAACCTTTT-CA-AAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAA
*
115867 GC
63 -T
* * ** * * * * ** *
115869 CCACAGGAGTTAGTGGTTACCTTTTCAAAGT-TCACACGAGGTT-GTGGCACCATAGTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGA-GTTGGTGGCAACTTTTTCAAAAT
* * * * * * * ** * * * *
115931 CTATACGAGTTGGTAGTAACTTTTTCAAAAGCCTACACTTGTTGGTAGTAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * *
115995 CCACACGAGTTGGTGGCAACCATTTCAAAGT-CCACACGAGTTGATGGCAAC-CTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * ** *
116057 CTACAAGAGTTGGTGGCAACTTTTTTAAAAGCCCAAAAGCCCACAAGATTTGGAAGCAACTATTT
1 CCACACGAGTTGGTGGCAAC-CTTTT-------CAAAATCCCACACGAGTTGGTGGCAACTTTTT
**
116122 CAATGT
58 CAAAAT
* * * * *
116128 CCACACGAGTTGGTGGTAACCTTTTGAAAAGT-CTACAAGAGCTAGG-GGCAACTTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAG-TTGGTGGCAACTTTTTCAAAA-
*
116191 C
63 T
** * * * * *
116192 CCACACGAGTTGGTAACAACCTCTTT-AAAGT-CTACACAAGTTGTTGGCAACCTTTTTTTAAAA
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGCAA-C--TTTTTCAAA
*
116255 AGC
62 A-T
* ** * * * * * * *
116258 CCACACGAGTTAGTAACAACCTTTTCAAAGT-CAACA-TATGTTGTTAGCAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGA-GTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * *
116321 CCACATGAGTTGGTAGTAACTTTTTCAAAATCACACATGAGTTGGTAGCAACCTTTTCAAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
116384 GCACA-GAGTTGGTGACAACCTTTCCAAAATCCTACTCAAGTTGGTCGCAACATTTTCAAAATT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
** * * ** * * ** *
116447 TGACATGAGTTGGTAGCAACC-TTTCAAAGGCCCACACAAGTTGGTGGTAACCATTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * *
116510 CCACACGAGTTAGTGGTAACCATTTCAAAAGCCCACATGGGTTGGTGGCAACCTTTT-AAAGAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAA-AT
* * * * * * *
116573 CTCACAAGAGTTGGTGGCAACCTTTTCAAGAGCTCATAGGAGTTGGTGGCAACCTTTTCAAAAAT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * * * * ** *
116638 CCACATGTGTTAGTGGTAA-CTATTTCAAAGT-CTACACTAGTTAAT-GCTAAC-CTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGC-AACTTTTTCAAAA-
116699 T
63 T
* ** * * * * *
116700 CCATAATAGTTGGTGGTAACCTTTTCAAAAGCCTACGA-GAGTTGGTCGTAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCAC-ACGAGTTGGTGGCAA-CTTTT-------
*
116764 CTACTTAAAGT
57 -T-C--AAAAT
** * * * ** * *
116775 CCACATAAGTTGTTGGCAACCTTTTCAAAAACTCACATAAGTTGGTGGAAACCTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * ** *
116838 CCCACATGAGTTGATAGCAACCCTTTCAAAAGT-TCACACGAGTTGCTGACAACCCTTTCAAAGT
1 -CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * ** * * * *
116902 CCACATAAGTTGTTTGCAATATTTTC-AGATGCCTACACAAGTTGGTGGTAA-TCTTTTC--AAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAAT-CCCACACGAGTTGGTGGCAACT-TTTTCAAAAT
* * * *
116963 GCCTACACGAGTTGTTGGCAACCTTTTTAAAATCTCACACGAGTTGGTGGTAACCTTTTT-AAAA
1 -CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAA
*
117027 G
63 T
* * * * * * * * * * ** *
117028 CTCGCATGAGTTAGTGGTAACCTTTTCCAAGT-TCACACGAGTTTGTGGCACCATAGTCAAAGT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * * * * * * * *
117091 CTACACAAGTTGGTAGTAACTTTTTTAAAAGCCTACA-TATGCTGCTGGTAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGA-GTTGGTGGCAACTTTTTCAAAAT
* * * * *
117154 CCACACGAGTTGGTGACAACCATTTCAAAGT-CCACACGAGTTGATGGCAAC-CTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * **
117216 CTACAAGAGTTTGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGAAGCAACTATTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCC---A---CAC--GAGTTGGTGGCAACT-TTT
**
117281 T-AATGT
57 TCAAAAT
* * * * * *
117287 CCATACGAGTTGGTGGCAACCTTTTGAAAAGT-CTACAAGAGTTAGG-GTCCA-TCTTTTCAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTT-GGTGGCAACT-TTTTCAAAA
*
117349 GC
63 -T
** * * * * *
117351 CCACACGAGTTGGTAACAACCTTTTCAAAGT-CTACACAAGTTGTTGGCAACCTTTTTTTAAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-C--TTTTTCAAAA
*
117415 GC
63 -T
* * *** * * ** * * *
117417 CCACATGAGTTAGTAATAACCTTTTCAAAGT-CAACATAAGTTGTTAGCAACCTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * *
117480 CCACATGAGTTGGTAGTAACCTTTTCAAAATCACACACGAGTTGGTAGCAACCTTTTCAAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * ** * * ***
117543 CCACA-GAGTTGGTGACAACCTTTTCAAACT-TTACACAAGTTGTTAAAAACTTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
** * ** ** * * * *
117605 CCACACGAGTTAATGACAACCTTTTCAATGT-CCACATAACTTGTTGGCAACCTTTTCAAAAAC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * * *
117668 CCACACAAGTTGGTGGCAACCATTCCAAAATCCCACTCGAGTTGGTCGCAACCTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * ** * *
117731 CTAACACGAGTTGGTAGCAACC-TTTCAAAGGCCCACACGAGTTGGTGGTAACTATTTCAAAAT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * *
117794 CCCACATGAGTTGGTGGCAACCTTTGCCAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAG
1 -CCACACGAGTTGGTGGCAACCTTT-TCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-
117858 T
63 T
* * * * * * * * * * * **
117859 CTAAAAGAGTTGGTGGCAATCATTTCAAAAGCTCATACGAGTTAGTAGCAACCTTTTCAAAGGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAA-AT
* ** * * * * **
117923 CCACATGAGTCAGTGGGAATCTTTTCAAAAGT-CCACACGAGTTGGTAGCAACATTTTCAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * ** *
117986 CCACATGAGTTGTTGGCAACCTTTTCAAAAGCCTACATGAGTTGGTAACAAC-CTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * *
118048 CCTACACGAGTTGGTAGCAACCTTTTCAAAAGCCTACACGAGTTGGTGGTAAGCTTTGT--AAAT
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* ** * * * ** * *
118111 GGCCACACAAGTTGGTGGCAAATTTTTC-AAAGCCCAAATGAGTTATTGGCAACCTTTTCAAAAC
1 --CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* ** * *
118175 CCGACAGGAGTTGGTGGTTACCTTTTCAAAAAT-CCACACGAGTTGGTGGGAACCTTTTCAAAAA
1 CC-ACACGAGTTGGTGGCAACCTTTTC-AAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAA
118239 T
63 T
* * * * * * *
118240 TCACACGAGTTGGTGGTAA-CTATTTCAAAGT-CCACATGAGTTGATAGCAAC-CTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * ** * * * * **
118302 CTATAAAAGTTGGTGGCAACCTTTTTAATAGCCCAAAAGCCCACACAAATTGGTGGTAACCATTT
1 CCACACGAGTTGGTGGCAACC--TTT--T----CAAAATCCCACACGAGTTGGTGGCAACTTTTT
**
118367 CAAAGC
58 CAAAAT
* ** * * * * *
118373 CCACACGAGTTGATGATAACTTTTTTAAAAGTCTTCA-A-GAGTTGGTAGCAACTTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TC-CCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * *
118436 CC-CACGTGAGTTAGG-ACCAACCTTTTCAAAATCTCACATGAGTAGATGGCAACATTTTT-AAA
1 CCACAC--GAGTT-GGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAAC-TTTTTCAAA
118498 AT
62 AT
* * * ** * * * * * *
118500 CCCATATGAGTTGGTAGCAACCTTTTCAAAGGCTCACATGAGTTGGCGGTAACCTTTTCAGAAGT
1 -CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCA-AAAT
* * ** * * * * * *
118565 CCATATGAGTTGGTGATAACATTTTC-AAA-GCCACACGAGTTGTTGTCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * * * * *
118626 CCTACGTGAGTTGGTGGAAACTTTTTC-AACTACCTACACAAGTTGGTGGCAACCTTTTCAAAGT
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAAT-CCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * ** * * *
118690 GTACACGAGTTAGTGGTAACCTTTT-AAAAGGT-TGACACGAGTTGGTGGTAA-TCATTTCAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA--TCCCACACGAGTTGGTGGCAACT-TTTTCAAAA
118752 T
63 T
* * * * *
118753 CCACACGAGTTGATAGCAACC-TTTCAAAACCCCAAAAGCCTACACGAGTTGGTGGTAACCTTTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA--TC-----CC-ACACGAGTTGGTGGCAACTTTTT
118817 CAAAAGT
58 CAAAA-T
* ** * * ** *
118824 CTACGA-GAGTTGGTCACAACCTTTTCAAAAGCCCACACGAGTTGATAACAACCTTTTT-AAAGT
1 CCAC-ACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
** ** * * * * * * *
118887 CCACATAAGTTATTGGCAACCTTTCCAAAAGCTCATACAAGTTAGTGGCAACCTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * * *
118950 CTACATGAGTTGGTAGCAACCTTTTCAAAAGCTCACAGGAGTTGGTGACAACCTTTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * *
119013 CCACATAAGTTGTTGGCAACATTTTCAAAAGT-CCACACGAGTTGGTGGCAACCTTTTC-AAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
119075 CCTACACGAGTTGTTGACAACCTTTTTAAAAGCTCACACGAGTTGGTGGTAACTTTTACAAAAAG
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * * * * ** * * **
119140 CCACACAAGTTAGTGGTAACCTTTTTAAAAGCCCATAGGAGTTACTGGTAACCTTTTCAATGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** * * * * * *
119203 TCACACGGGTTTGTGGC-ACCATAGTCAAAGT-CTACATGAGTTGGTAGTAACTTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACC-TTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * ** * **
119265 CCTACACGTGTTGATGGTAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCATTTGAATGT
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * ** *
119329 CCACATAAGTTGATGGCAACC-TTTCAAAAGT-CTACAAGAGTCAGTGGCATCCATTTTAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCA-AC-TTTT------
* *
119392 CCAAAAGC
57 TCAAAA-T
* * ** * ** * * * * *
119400 CCATAAGAGTTGGAAGCCA-CTATTTCAATGT-CTACATGAGTTGGTGACAACCTTTTGAAAAGT
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * *** * *
119463 CTACAAGAGTTGGTAGTAACCTTTTCAAAAGCCCACACGAGTTGGTAATAACCTTTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * **
119526 CTACACAAGTTGTTGGCAACCTTTTCAAAAGCTCACACAAGTTGGTGATAACTTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * * * * **
119589 CTCGCATGAATTAGAGGTAACCTTTTCAAAATCACATAC-ATGTTGGTAGCAACCTTTTCAAAGG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGA-GTTGGTGGCAACTTTTTCAAAAT
* ** ** * * * * **
119653 CCTCCACGAGTTTATGATAACCTTTTCGATAGT-CCACACGAGTTGGTGGCAACCTTTTCGAAGC
1 CC-ACACGAGTTGGTGGCAACCTTTTC-AAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * * * * * *
119717 CCACGTGAGTTGTTGGCAACCTTATAAAAAGT-CTACATGAGTTGGTAGCAACCTTTTCAAAAAC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * ** * * * *
119781 CCACATGAGTTGGTAGCAACCTTTTCAAAA-CTGTACATGAGTTAGTGGCAACTATTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATC-CCACACGAGTTGGTGGCAACTTTTTCAAAAT
*** * ** * * * *
119844 CTGTAAGAGTTGACGGCAACC-TTTCAAAGT-CCACAAGAGTTGGTGACAACCTTTTCAAAAGCC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA---
119907 T
63 T
* * * * * * *
119908 AAAAACCCACACGAATTGGTGACAACCATTTT-GAAGT-CTACACGAGTTAGTGGTAACCTTTTT
1 ------CCACACGAGTTGGTGGCAACC-TTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTT
119971 -AAAATT
58 CAAAA-T
* ** * * * * *
119977 GCACAATAGTTGGTGGCAACCTTTTCAAAAGCCCACCCGAGTTGGTGACAACCTTTTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * *
120040 -CA-AC-A-TTGTTGGCAACATTTTCAAAAGCCCAAATGAGTTGGTGGTAACCTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** * * * * **
120099 CCCACATGAGTTGGTGGTAACTTTTTCAAAATCTTAAACGAATTGGTAGCAACCTTTTCAAAGGC
1 -CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAA-AT
* *** * * * * *
120164 CCACATGAGTTGGTTATAACATTTTCAAAATTCTACACGAGTTGTTGGCAACCTTTTT-AAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * * * * * * * ** *
120227 CTCGCATG-GTTTGGTGGTAACCTTTTCAAACT-TCACACGCGTTTGTGGCACCATAGTCAAAGT
1 C-CACACGAG-TTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* **** * * *** * *** * ** ***
120290 CCA-AC-A-TT--T-TCAA-AAGCTC-ACA--CTAGTTG-GATGGCATC-ATTTTTGAAGTTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * ** * * * *
120341 ATAAAAG--TTAGTGGC-ACCATAGTCAAAGT-CCACACGAGTTAGTGGCAACATTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACC-TTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * ** ** * **
120402 CCACATGAGTTGGTAGCAGCCTTATT-TAAAGCCCACACGTCTTAATGGCAACCTTTTCAAGGT
1 CCACACGAGTTGGTGGCAACCTT-TTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * ** * *
120465 CCACAC-ATGTTGGTGGCAACCTTCTCAAAAGCCTAAAAGCCTACACGAGTTGGCAGTAACCTTT
1 CCACACGA-GTTGGTGGCAACCTTTTCAAAA---T-----CCCACACGAGTTGGTGGCAACTTTT
*
120529 TCAAAAG
57 TCAAAAT
** * * ** * * ** * * **
120536 CTGTCGCGAGTTAGTAACAACCTTTTCAAAGT-CAACATAAGTTGTTGGCAAC-CTTTCGAAGGT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* ** * * *
120599 CCACATGAGTTGGTGGCAACCTTTTCAAAATAACACATGAGTTGGTAGCAA-TCTTTTCAAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACT-TTTTCAAAAT
* * * * * * * * * *
120662 CC-CACAGTGTTGGTGACAACTTTTTCAAAGT-CTACACAAGTTGTTGGAAACATTTTCAAAAGC
1 CCACAC-GAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * *
120725 CCACACGGGTTGATGACAACTTTTTCAAAAT-CCATACAAGTTGTTGGCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** * * *
120787 CTCACACGAGTTTGTGACAACCCTTTT-AAAATCTCACTTGAGTTGGTAGC-ACCTTCTCAAAAT
1 C-CACACGAGTTGGTGGCAA-CCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * *
120850 CTCAGATGAGTTGGTGGTAACCTTTTCAAAAGCGCACACGAGTTGGTGGCACCTTTTGCAAAAGT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * *
120915 GCACATGTGTTGGTGGC-ACGATTTTC-AAAGCCCAAACGAGTTGTTGGCAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAAC-CTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * ** * * * ** *
120978 CCACAGGAGTTGGTGGCAACCTTTACAAAGT-TCACACGAGTTTATAGCACCATAGTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** * * * * * *
121040 CTACATGAGTTGGAT-GTAATATTTTCAAAAGCCCATATGAGTTGCTGGTAACCTTTTT-AAAGT
1 CCACACGAGTTGG-TGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * * ** * * ***** *
121103 CTATACAAGTGTGGCGGC-ACCATAGTCAAAGT-CCAAAC-AGGTTGGTGGCAAAAAAGTCAAAG
1 CCACACGAGT-TGGTGGCAACC-TTTTCAAAATCCCACACGA-GTTGGTGGCAACTTTTTCAAAA
121165 T
63 T
* * * * * * * *
121166 CCACACGAGTTGGTGGTAACATTTTC--AATACGACATGAGTTGGTAGCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** * * ** ** ** * *
121227 CAGACACGAGTTTGTCGCTGCTCTTTT-TAAAGCCCACATAAGTTAATATCAACCTTTTCAAAGT
1 C-CACACGAGTTGGTGGCAAC-CTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * *
121291 CCACATGAGATGGTGGCAACCTTTTCAAAAGTCTAAAAGCCCACACAAGTTGGTGGTAACTATTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA---T-----CCCACACGAGTTGGTGGCAACTTTTT
*
121356 CAAAGT
58 CAAAAT
*** * * * * * *
121362 TTTCACGAGTAGGTGGCAACATTTTCAAAAGT-CTACGA-GAGTTGGTCGCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCAC-ACGAGTTGGTGGCAACTTTTTCAAAAT
* * ** * *** *
121425 CTCACATGAGTTGGTGACAACCTTTTCAAAAT-CCACATAAGTTGTTGGCAACCACTTCAAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * *
121488 CTCACACAAGATGGTGGCAACCTTTTCAAAATCCCACATGAGTTGGTAGCAACCTCTTCAAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* ** * * * * *
121552 CTCACACGAGTTGCTAACAACCCTTTCAAAGTCCGCACA--AGTTGTTGGCAACATTTTCAGAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCC-CACACGAGTTGGTGGCAACTTTTTCA-AAA
121615 T
63 T
* * *
121616 CCACACGAGTTGGTGGCAACCTTTTC--AATGCCTACACGAGTTGTTGGCAACCATTTT-AAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAAT-CCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * *
121678 CTCACATGAGTTGGTGGTAA-CTTTTACAGAAA-CCAACACGAGTTGGTGGTAACCTTTTT-AAA
1 C-CACACGAGTTGGTGGCAACCTTTT-CA-AAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAA
*
121740 AG
62 AT
* * * * * * * * ** *
121742 CTCACATGAGTTAGTGGTAACCTTTTCAAAGT-TCACACGAGTTTGTGGCACCATAGTCAAAGT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * ** * * * * * * *
121805 CTACAGGAGTTGGTAGTAACTTTTTCAAAAGCGTACATGTGCTGGTAGTAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
121868 CCTACATGAGTTTGCGGCAACCATGTCAAAGT-CCACACGAGTTGATGGCAAC-CTTTCAAAAGT
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
** * * ** * *
121931 TTACAAGAGTTGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGAAGTAACTATTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCC---A---CAC--GAGTTGGTGGCAACTTTTT
**
121996 CAATGT
58 CAAAAT
* * * * * *
122002 CCATACGAGTTGGTGGCAACCTTTTGAAAAGT-CTACAAGAGTTAGG-GACAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTT-GGTGGCAACTTTTTCAAAA-
*
122065 C
63 T
* ** * * * * * *
122066 CCACATGAGTTGGTAACAACCTTTTCAAAGT-CTACACAAGTAGTTGGCAACTTTTTTTTTAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAAC----TTTTTCAAA
*
122130 AGC
62 A-T
* ** * * ** * * * *
122133 CCACACGAGTTAGTAACAACCTTTTCAAAGT-CAACATAAGTTGTTAGCAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
** * * * * * * * * *
122196 CCACATAAGTTGGTAGTAACTTTTTCAAAATCACATACAAGTTGGTAGCAACCTTTTCAAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** ** * * *
122259 CCACA-GAGTTAGTGACAACCTTTTCAAACT-CCACATAAGTTATTAGAAACTTTTTTAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* ** * ** * * * * *
122321 CCACACAAGTTAATGACAACCTTTTCAATGT-CCACACAACTTGTTGGCAACCTTTTCAAAAAC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * * *
122384 CCACACAAGTTGGTGGTAACCTTTCCAAAATCCCACTCGAGTCGGT--C-GC----TCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * ** * * * ** *
122440 CCTATACGAGTAGGTAGTAA-CATTTGAAAGGCTCATACGAGTTGGTGGTAACCATTTCAAAAG
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
122503 CC-CAATGGGTTAGTGGCAACCTTTGCAAAAGT-CCACACGAGTTGGTGGCAACCTCTTCAAGAG
1 CCAC-ACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
122566 CTCATAGGAGTTGGTGGCAACCTTTTGAAAAAT-CTACACGTGTTAGT-GCTAACTATTTCAAAG
1 C-CACACGAGTTGGTGGCAACCTTTT-CAAAATCCCACACGAGTTGGTGGC-AACTTTTTCAAAA
122629 T
63 T
* ** * *
122630 CCACACTAGTTAATGCCAACC-TTTCAAAAGT-CCACAAGAGTTGGTGGCAACTTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTT-------
*
122693 CCAAAAGC
58 -CAAAA-T
* * * * * *
122701 CCACACGAATTAGTGGAAACCATTTCAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * * * **
122764 CTAGAAGAGTTGGTGGCAATCATTTCAAAAGCTCACATGAGTTGGTAGCAACCTTTTCAAAGG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * **
122827 CCGACATGAGTCGGTGGGAACCTTTTCAAAAGT-CCACACGAGTTGGTAGCAACCTTTTCAAAGC
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * * * * *
122891 CCACACGAGTTATTGGCAACCTTTTTAAAAGCTCACATGAGTTGGTGACGAC-CTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * *
122953 CCTGCACGAGTTGGTAGCAACCTTTTTAAAAGCCTACAC-ATGTTGGTGGTAAGC-TTTGC-AAA
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGA-GTTGGTGGCAA-CTTTTTCAAAA
123015 T
63 T
* * * * * * * * * *
123016 GGGCACACAAGTTGGTGACAACTTTTTC-AAAGCCCAAATGAGTTGTTGGCAACCTTTTCAAAAG
1 --CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * ** *
123080 CTGACAGGAGTTGGTGGTAACCTTTTCAAAAAT-CCAGACGAGTTGGCAAG-AACCTTTTCAAAA
1 C-CACACGAGTTGGTGGCAACCTTTTC-AAAATCCCACACGAGTTGG-TGGCAACTTTTTC-AAA
123143 AT
62 AT
* * * * * * * * *
123145 TCACACAAGTTGGTGGCAA-CTATTTCAAAGT-GCACATGAATTGATAGCAAC-CTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
*** ** * * * * * * **
123207 CTGTAAAAGTTGGTAGCAACCTTTTCAATAGTCCAAAAGCCCACACAAATTTGTGGTAACCATTT
1 CCACACGAGTTGGTGGCAACC--TT---T--T-CAAAATCCCACACGAGTTGGTGGCAACTTTTT
**
123272 CAAAGC
58 CAAAAT
* * * * * * * *
123278 CCACACGAGTTGATGGCAACTTTTTCAAAAGT-CTATAAGAGTTGGTAGCAA---TGTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* ** * * * * *
123339 CCACACGAGTTAGCAGCAACCTTTTCAAAATCTCACATGAGTTGATGGAAACATTTTT-AATAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAAC-TTTTTCAAAAT
* ** * ** * * *
123402 CCCATATAAGTTCGTAACAACCTTTTCAAAA-GCCACACGAGTTGGTGGTAACCTTTT-AAGAAG
1 -CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAA-AA-
123465 T
63 T
* ** * * * * * *
123466 CCATACGAGTTGGTGATAACCTTCTC-AGA-GCCACACGAGTTGTTGTCAACATTTTT-AAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAAC-TTTTTCAAAAT
** * * ** ** * *
123527 CCTACGTGAGTTGGTGGTAACTTTTTC-ATTTACATACACGAGTTGGTGGCAACCTTTTCAAAGT
1 CC-ACACGAGTTGGTGGCAACCTTTTCAAAAT-CCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
123591 CTACAAGAGTTGGTGGTAACCTTTT-AAAAGGCCCACACGAGTTGGTGGTAA-TCATTCCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACT-TTTTCAAAAT
* * * * * *
123654 CCACACGAGTTGATAGCAACCTTTCAAAAGCCCAAAAGCCCACACGAGTTGATAGCAACCTTTTA
1 CCACACGAGTTGGTGGCAACCTTT-------TCAAAATCCCACACGAGTTGGTGGCAA-CTTTT-
* *
123719 AAAGCCCAAAAGC
57 -----TCAAAA-T
* * * * *
123732 CCACACGAGTTGGTAGCAACCTTTTCAAAAGT-CTACGA-GAATTGGTCGCAACCTTTTCAAAAA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCAC-ACGAGTTGGTGGCAACTTTTTC-AAAA
123795 T
63 T
* * * * * ** * * *
123796 CCACATGAATTGGTGACAACCTTTT-TAAGT-CCACATAAGTT-GTCAGCAACCTTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGT-GGCAACTTTTTCAAAAT
* * * * *
123857 CTCACACAAGTTGGTGGCAACCTTTTCAAAATCCCACATGAGTTGGTAGCAACCTTTTCAAAAG
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * *
123921 CTTACAGGAGATGGTGACAACCTTTTCAAAGT-CCACACAAGTTGTTGGCAACATTTTCAAAAGT
1 C-CACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * ** * * *
123985 CCACATGAGTTGGTGGCAACCTTTGC-AAAGCCTGCATGAGTTGTTGGCAACCTTTTT-AAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * *
124047 CTCACACGAGTTGGTGGTAA-CTTTTACAGAAAGT--CACATGAGTTGGTGGTAACCTTTGT-AG
1 C-CACACGAGTTGGTGGCAACCTTTT-CA-AAA-TCCCACACGAGTTGGTGGCAA-CTTTTTCA-
**
124108 AAGC
60 AAAT
* * ** * * * * * ** * * ** *
124112 CCATAGGAGTTATTGGTAATCTTTTCAAAGT-TCACACGAGTTTGCAGCACCATAGTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * * * * *
124174 CTACA-GAGTTGGTAGTAACTTTTTCAAAAACCTACACGTGCTGGTGGTAACTTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * *
124237 CCACATGAGTTGGTGGCAACCATTTGAAAGT-CCACATGAGTTGATGGCAAC-CTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * ** ** ** *
124299 CTACAAGAGTTGGTGGCAGCCTTTTCAAAAGCCCAAAAGCCCATAAAAGTTGGAAGTTACTATTT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCC---A---C--ACGAGTTGGTGGCAACTTTTT
*
124364 CAATAT
58 CAAAAT
* * * * * * * *
124370 CCACACGAGTTGGTGGTAACCTTTTGAAAAGT-CTACAAGAGTTGGTAGTAACCTTTACAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
** * * * * * *
124434 CCACACGAGTTGGTAACAACCTTTTCAAAGT-CTACACAAGTTGTTGGCAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
** * * * * ** * *
124497 CCACACGAGTTGGTGATAACTTTTTCAATATCTCGCATTAGTTGGTGGTAACCTTTTCAAAAT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * ** * * * * ** * *
124560 CACATAC-ATGTTGGTAGAAACCTTTTCAAAGGCCTATATGAGTTTGTGATAACCTTTTCAATAG
1 C-CACACGA-GTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAA-AA
124624 T
63 T
* * * * * * * * *
124625 TCACACAAGTTGGTGGCAGCCTTTTC-AAAGCCCACGCGAGTTGTTGGCAACCTTATAAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * *
124688 CCACACGAGTTGGTGGCAACCTTTTCAAAAAT-CCATATGAGTTGGTAGCAACCTTTTCAAAACT
1 CCACACGAGTTGGTGGCAACCTTTTC-AAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * *
124752 CTACATGAGTTGGTGGCAA-CTATTTCAAAGT-CCACACAAGTTGTTGGCAA-TATTTTCAAAAG
1 CCACACGAGTTGGTGGCAACCT-TTTCAAAATCCCACACGAGTTGGTGGCAACT-TTTTCAAAA-
124814 T
63 T
* ** * * *
124815 CCACACGAGTTGGTGGCAACCTTTTCAAAGT-CCACATAAGTTGTTGGCAACCATTTT-AAAAG
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAAT
* * * * **
124877 CTCAAACAAGTTGTTGGCAA-CTTTTACAAAAACCCACACGAGTTGGTGATAACCTTTTT-AAAA
1 C-CACACGAGTTGGTGGCAACCTTTT-CAAAATCCCACACGAGTTGGTGGCAA-CTTTTTCAAAA
*
124940 G
63 T
* * * * * * * * ** *
124941 CC-CATTCGAGTTAGTGGTAACCTTTTCAAAGT-TCACACGAGTTTGTGGTACCATAATCAAAGT
1 CCACA--CGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * ** * * ** *
125004 CTACACAAGTTAGTGGTAACGTTTTTAAAAGT-TGACAGGAGTTGATGGCAACCATTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * * * *
125068 CCACAAGAATTAGTGGCAACCTTTTTAAAGT-TCATATGAGTTGGTGGTAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * *
125131 CCACACAAATT-GTCGGTAGCCTTTTTAAAAGT-CCACACGAGTTGATGACAACCTTTTCAAAGT
1 CCACACGAGTTGGT-GGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * ** * * *
125194 CCACATGAATTGGGGGCAATCTTTTCAAAGGCCCACACAAGTTGGTGGTAACATTTTCAAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* ** * ** * * **
125258 CCACACTAGTTGGTGAAAACCTTTTC-AAA-GCTGCACGAGTTGTTGGCAACCTTTTCGAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTC-AAAAT
* * * * * *
125320 CCACATGAGTTAGTGGCAACTTTTTCAACAA-CCCACAAGAGTTGGTGGCAACTTTTTTAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAA-AATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * * * * ** *
125384 CCACACGATTTGGCGACAACTTTTTCAAAGT-TCACACAAGTTTGTGGCACCATAGTCAAAGT
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
* * * * * * ** * * ** *
125446 CCACAAGAGTTAGTGGTAACATTTTAAAAAGT-CTACATAAGTTGATTGCAACCATTTCAAAAGC
1 CCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
* * * * * * * *
125510 CCACACGAATTGGTGGCAACCTTTTTAAAGT-CCATATGACTTGGTGGCAACCTTTTCAAAAGA
1 CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAA-T
** * * ** * * * * * * *
125573 CTGCACGTGCTATTGG-AAGCTTTTTTAAAAGCCCACATGAGTTGATGGCAACCTTTTCAAAGT
1 CCACACGAGTTGGTGGCAA-CCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
** * * * *
125636 CCACATAAGTTAGG-GGCAACCTTTTC-AAAGCCCACACAAATTGG-GAGCAACCTTTTCAAA
1 CCACACGAGTT-GGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTG-GCAACTTTTTCAAA
125696 GTTCACATGA
Statistics
Matches: 10136, Mismatches: 2965, Indels: 1405
0.70 0.20 0.10
Matches are distributed among these distances:
51 4 0.00
52 7 0.00
53 2 0.00
54 3 0.00
55 3 0.00
56 27 0.00
57 17 0.00
58 8 0.00
59 85 0.01
60 47 0.00
61 287 0.03
62 1289 0.13
63 3862 0.38
64 3104 0.31
65 208 0.02
66 119 0.01
67 59 0.01
68 5 0.00
69 30 0.00
70 106 0.01
71 610 0.06
72 124 0.01
73 6 0.00
74 6 0.00
75 39 0.00
76 3 0.00
77 7 0.00
78 27 0.00
79 42 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (63 bp):
CCACACGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACTTTTTCAAAAT
Found at i:113078 original size:33 final size:31
Alignment explanation
Indices: 112453--113517 Score: 141
Period size: 31 Copynumber: 33.5 Consensus size: 31
112443 ATGAATTTGT
* * * **
112453 GGCAACCATTTCAAAGTCCACACGAGTTGGT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* * * **
112484 GGCAACATTTTCAAAAGTCTACA-AGAGTTGGT
1 GGCAACCTTTTC-AAAGCCCACACA-AGTTGAA
* * ** **
112516 GGCAACCATTTTAAAAGCTCACAGGAGTTGGT
1 GGCAACC-TTTTCAAAGCCCACACAAGTTGAA
* * * **
112548 GACAACCTTTTCAAAGTCCATACAAGTTGTT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* * **
112579 GGCAACCTTTTTAAAGTCCACACAAGTTGTT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* * * * ** **
112610 GACAACCCTTTCAAAATCTCACATGAGTTGGT
1 GGCAACCTTTTC-AAAGCCCACACAAGTTGAA
* * * *
112642 GGCAACTTTTTTAAAATCCCACACGAA-TTGGTA
1 GGCAAC-CTTTTCAAAGCCCACAC-AAGTT-GAA
* **
112675 -GCAACCTTTTCAAAGGCCCACACGAGTTGGT
1 GGCAACCTTTTCAAA-GCCCACACAAGTTGAA
* * ** * **
112706 GGTAACTTTTTCAAAAATCCACACGAGTTGGT
1 GGCAACCTTTTC-AAAGCCCACACAAGTTGAA
* * * ** **
112738 GGCATCCTTTTTAAAAGCCCAGATGAGTTGGT
1 GGCAACC-TTTTCAAAGCCCACACAAGTTGAA
**** * *
112770 GGCAACCTTTTTCAAATTTTACACGAGTTTG-T
1 GGCAACC-TTTTCAAAGCCCACACAAG-TTGAA
* * * *
112802 GGTAACATTTTCGAAAGCCCACACGAGTT-ATT
1 GGCAACCTTTTC-AAAGCCCACACAAGTTGA-A
* * ** * *
112834 GGTAACATTTTCAAAAG-CCACATGAGATGGTA
1 GGCAACCTTTTC-AAAGCCCACACAAG-TTGAA
* * ** *
112866 -GCAACCTTTTTAAAAGCACACATGAGTTGAT
1 GGCAACC-TTTTCAAAGCCCACACAAGTTGAA
* * ** **
112897 GGCAACCTTTTAAAAGTCCACATGAGTTGGT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* *
112928 GGCAACCTTTTCAAAGCCCATACAAGTT-AGT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGA-A
* * * * * **
112959 GGAAACCATTTCAAAGTCCGCATAAGTTGGT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
** *** * **
112990 GGCAATTTTTTCAAAAGCCTGTACTAGTTGTT
1 GGCAACCTTTTC-AAAGCCCACACAAGTTGAA
* * *
113022 GGCAGCCTTTTTAAATGCCCACA-AGGGTTGAA
1 GGCAACCTTTTCAAA-GCCCACACA-AGTTGAA
* **
113054 GGCAACCTTTTCAAAGTCCACACAAGTTGGG
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* * **
113085 GGTAACCTTTTCAAAGCCCACACGAGTTGGT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* *
113116 GGCAACCTTTTAAAAAGCCCA-A-AA-TTGTTAG
1 GGCAACCTTTT-CAAAGCCCACACAAGTTG--AA
*
113147 GGACAA-CTATTTCAAAGTCCACACAAGTTGATA
1 GG-CAACCT-TTTCAAAGCCCACACAAGTTGA-A
* * * **
113180 -GCAACCCTTTAAAAGTCCACA-AGAGTTGGT
1 GGCAACCTTTTCAAAGCCCACACA-AGTTGAA
* * * **
113210 GGCAAACTTTTCAAAAGCCTAAAAGCTCACATGAATTGGT
1 GGCAACCTTTTC-AAAGCC------CACACA--AGTTGAA
* * ** **
113250 GGTAACCATTTCAAAGTTCACACGAA-TTGGC
1 GGCAACCTTTTCAAAGCCCACAC-AAGTTGAA
* * * * * * *
113281 GGTAACTTTTTCAAAAGTCTACAAAAGTTCAT
1 GGCAACCTTTTC-AAAGCCCACACAAGTTGAA
* * **
113313 GGCAACCTTTTCAAAGTCCACACGAGTTGCT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* * **
113344 GGCAACCTTTTCAAAGTCCATACAAGTTGTT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
* * **
113375 GGCAACCTTTTCAAAAGGCCACACGAGTTGGT
1 GGCAACCTTTTC-AAAGCCCACACAAGTTGAA
* * * ** *
113407 GGTAACCTTTTCAAGATCTCACATGAGTTGGTA
1 GGCAACCTTTTCAA-AGCCCACACAAGTT-GAA
* * **
113440 -GCAAACTTTTCAAAATCCCACATGAGTTGATA
1 GGCAACCTTTTC-AAAGCCCACACAAGTTGA-A
* * ** * **
113472 -GAAAACTTTTCAAAATCCACACAATTTGTT
1 GGCAACCTTTTCAAAGCCCACACAAGTTGAA
113502 GGCAACCTTTTCAAAG
1 GGCAACCTTTTCAAAG
113518 TCCAACATTT
Statistics
Matches: 777, Mismatches: 199, Indels: 116
0.71 0.18 0.11
Matches are distributed among these distances:
29 3 0.00
30 2 0.00
31 362 0.47
32 354 0.46
33 28 0.04
34 4 0.01
38 3 0.00
39 5 0.01
40 16 0.02
ACGTcount: A:0.32, C:0.21, G:0.19, T:0.28
Consensus pattern (31 bp):
GGCAACCTTTTCAAAGCCCACACAAGTTGAA
Found at i:113785 original size:103 final size:103
Alignment explanation
Indices: 113592--113799 Score: 244
Period size: 103 Copynumber: 2.0 Consensus size: 103
113582 GCAACGTTTT
* * ** * * *
113592 CAAAAGCCCACACGATTTGGTGGCAGCCTTTTTTAAAGCCCACATGAGTTGATGACAACCTTTTT
1 CAAAAGCCCACACGAGTTGGTAGCAGCCTTTTCAAAAGCCCACATGAGTTGATAACAACATTTTC
*
113657 AAAGTTCACACGAGTTGGTGACAACCTTTTTAAAAGCC
66 AAAGTTCACACGAGTTGGTGACAACCTTTTCAAAAGCC
* *
113695 CAAAAGCCCACACGAGTTGGTAGCAAG-CTTTTCAAAAGCCTACATGAGTT-AGTAATAACATTT
1 CAAAAGCCCACACGAGTTGGTAGC-AGCCTTTTCAAAAGCCCACATGAGTTGA-TAACAACATTT
* *
113758 TCAAAG-TCAACAC-ACGTTGTTGGCAACCTTTTCAAAAGCC
64 TCAAAGTTC-ACACGA-GTTGGTGACAACCTTTTCAAAAGCC
113798 CA
1 CA
113800 CACGAGTTGG
Statistics
Matches: 89, Mismatches: 12, Indels: 8
0.82 0.11 0.07
Matches are distributed among these distances:
102 4 0.04
103 83 0.93
104 2 0.02
ACGTcount: A:0.33, C:0.24, G:0.17, T:0.26
Consensus pattern (103 bp):
CAAAAGCCCACACGAGTTGGTAGCAGCCTTTTCAAAAGCCCACATGAGTTGATAACAACATTTTC
AAAGTTCACACGAGTTGGTGACAACCTTTTCAAAAGCC
Found at i:113880 original size:95 final size:94
Alignment explanation
Indices: 113695--128175 Score: 4199
Period size: 95 Copynumber: 151.6 Consensus size: 94
113685 TTTAAAAGCC
* * * * * *** *
113695 CAAAAGCCCACACGAGTTGGTAGCAAGCTTTTCAAAAGCCTACATGAGTTAGTAATAACATTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTTC
* * * * *
113760 AAAGTCAACACA-CGTTGTTGGCAACCTTTT
65 AAAATC-CCACAGAGTTGGTGACAACCTTTT
* * * *
113790 CAAAAGCCCACACGAGTTGGTGGTAACATTTTGAAAATCGCACACGAGTTGGTTGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
* * *
113855 AAAAACCCATAGAGTTGGTGACAACCTCTT
65 AAAATCCCACAGAGTTGGTGACAACCTTTT
* * * * * * * * *
113885 C-AAAGTCCACACAAGTTGTTAGAAACCTTTTCAAAAGCTTACACAAGTTGGTGGCAACCTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
* * * *
113949 AAAATCTCACTCGAGTTGGTGGC-GCTCTTTT
65 AAAATCCCAC-AGAGTTGGTGACAAC-CTTTT
* ** * * ** * *
113980 CAAAATCTAACATGAGTTGGTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAACCATTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-ATCCACACGAGTTGGTGGCAACCTTTTC
* * *
114045 AAAAGCCCACATGAGTTGGTGGCAACCTTTG
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * ** * *
114076 CAAAAGTCCACAGGAGTTGGTGGCAACATTTCCAAGAGCCCACAGGAGTTGGTGGCAACCTTTAC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA-AATCCACACGAGTTGGTGGCAACCTTTTC
* * * * **
114141 AAAGTTCACC-C-GAGTTTGTGGCACCCTAGT
65 AAA-ATC-CCACAGAGTTGGTGACAACCTTTT
* *
114171 C-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAATCCACACGAGTTGGTGGTAA-CTATTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCT-TTT
* * * ** * **
114234 CATAGT-CTACACGAGTTCATGCCAA-CAGTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
114264 CAAAAGTCCACAGGAGTTGGTGGCAACTTTTTCAAAAGCCCAAAAGCCCTTACGAATTGGTGGCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCC---A---C--ACGAGTTGGTGGCA
* * *
114329 ACCATTTCAAAGT-CCACACGAGTTGGTGGCAACCTTTT
57 ACCTTTTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * * *
114367 CAAAGGTCTAGAAGAATTGGTGGCAACCTTTTCAAAAGCCTAGACGAGTTGGTGACAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTTC
* *
114432 AAAGTCCACACA-AGTT-GTTAGCAACCTTTT
65 AAAATCC-CACAGAGTTGGTGA-CAACCTTTT
* * *
114462 CAAAATCCCACACGAGTTGGTGGTAACCTTTTCAAAATCACACACGAGTTGGTAGCAACCTTTGT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTT-T
* *
114527 CAAAA--CCATAGAGTTGGTGACAAACTTTT
64 CAAAATCCCACAGAGTTGGTGACAACCTTTT
* * * * * * *
114556 C-AAA-CTCTACACAAGTTGTTAG-AAGCTTTTTCAAAAGTCCACACGAGTTAGTGACAACCTTT
1 CAAAAGC-CCACACGAGTTGGTGGCAA-CCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTT
* ** * * *
114618 CCAACGTCCACACA-AGTTGGTGGCAGCTTTTT
63 TCAAAATCC-CACAGAGTTGGTGACAACCTTTT
* * * * * * *
114650 TAAAAGCCCACACAAGTTGGTGGCAA-CTTGTCCAAAATCCCACTCGATTTGGTCGTAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTT-TTCAAAAT-CCACACGAGTTGGTGGCAACCTTTT
** * *
114714 CAAAATCTGACACGAGTAGGTAACAACC-TTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
114745 C-AAAGACCCACACGAGTTGGTGGTAACCATTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTG
1 CAAAAG-CCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTT
**
114809 CAAAAGGCCACACGAGTTGGTGACAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * * * * *
114841 CAAGAGCTCATAGGAGTCGGTGACAACCTTTTCAAAAATCCACACAAGTTAGTTGTAA-C-TAT-
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCTTTTC
** *
114903 AAAAGT-CCACACGAGTTAATGCCAACCTTTT
65 AAAA-TCCCACA-GAGTTGGTGACAACCTTTT
* * * * * *
114934 -AAAAGTCCACAAGAGTTGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACACGAATTAGTGACA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTT--------CAAAA-TCCACACGAGTTGGTGGCA
* * * *
114998 ACCATTTCAAAGT-CCATATGGGTTGGTGACAACCTTTT
57 ACCTTTTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
115036 CAAAAGTCTAGAAGAGTTGGTGGCAA-CTATTTCAAAATCCTACACGAGTTGGTAGCAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCT-TTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTT
** * **
115100 CAAAGGCCCATATGAGTTGGTGGTAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * *
115132 CAAAATCCCACATGAGTTGGTGGAAAACTTTTCAAAATCACACACGAGTTGGTGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
** *
115197 AAAATCCACACA-AGTTTTTGGCAACCTTTT
65 AAAATCC-CACAGAGTTGGTGACAACCTTTT
* * * * * * *
115227 CCAAAGCTCACGCGAGTTGGTAGCAACCTTTTCAAAGGTCCACATGAGTTGGTGGGAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-ATCCACACGAGTTGGTGGCAACCTTTTC
* *
115292 AAAAGT-CCACACTAGTGGGT-AGCAACC-TTT
65 AAAA-TCCCACA-GAGTTGGTGA-CAACCTTTT
* ** * * * * *
115322 CCAAAGCCCACAAAAGTTGTTGGCAACCTTTTCAAAAGCCACATGAGTT-GTGACATCC-TTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
*
115385 AAATCCTACATGAGTTGGT-AGCAACCTTTT
66 AAATCCCACA-GAGTTGGTGA-CAACCTTTT
** ** * * * *
115415 CAAAAGCCTGCACGAGTTGGTGTTAAGCTTTGC-AAATGGCCACACAAGTTGGTGGCAACTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAT--CCACACGAGTTGGTGGCAACCTTTT
* * * **
115479 C-AAAGCCCAAATGAGTTGTTGGTAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
** * * * *
115510 CAAAAGCTGACAGGAGTTGGTGGCAACCTTTTCAAAAATCTACACGAGTTGGTAGCAACTTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCTTTTC
* * *
115575 AAAAAT-TCACATGTGTTGGTGGCAA-CTATTT
65 -AAAATCCCACA-GAGTTGGTGACAACCT-TTT
* * * * * * ** ** *
115606 -TAAAGTCCACACGTGTTGCTAGAAACC-TTTCAAAAATCCGTAAAAGTTGCTGGCAACCATTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACC--TTT
* *
115669 AATAGCCCAAAAGTCCACACA-AATTGGT-AGCAACCATTT
63 --T----CAAAA-TCC-CACAGAGTTGGTGA-CAACCTTTT
* * * * ** *
115708 C-AAAGCCCACATGAGTTGGTGGTAACTTTTTCAAAAGTCTACAATAGTTGGTGGCAAACTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* *
115772 AAAAGT-CCACATGAGTTAG-CAGCAACC-TTT
65 AAAA-TCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * * * *
115802 ----AGCTCACACTAGTTAGCGGTAA-CTTTTGGAGAAACCCACACGAGTTGGTGGTAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CA-AAATCCACACGAGTTGGTGGCAACCTTTT
* * * ***
115862 TAAAAGCCCACAGGAGTTAGTGGTTACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
** ** * * * * * *
115894 C-AAAGTTCACACGAGGTT-GTGGC-ACCATAGTCAAAGTCTATACGAGTTGGTAGTAACTTTTT
1 CAAAAGCCCACACGA-GTTGGTGGCAACC-TTTTCAAAATCCACACGAGTTGGTGGCAACCTTTT
* * ** *
115956 CAAAAGCCTACACTTGTTGGT-AGTAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * *
115988 CAAAAGCCCACACGAGTTGGTGGCAACCATTTCAAAGTCCACACGAGTTGATGGCAACC-TTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * *
116052 AAAGT-CTACAAGAGTTGGTGGCAACTTTTTT
66 AAA-TCCCAC-AGAGTTGGTGACAAC-CTTTT
* * ** ** *
116083 AAAAGCCCAAAAGCCCACAAGATTTGGAAGCAA-CTATTTCAATGTCCACACGAGTTGGTGGTAA
1 -------CAAAAGCCCACACGAGTTGGTGGCAACCT-TTTCAAAATCCACACGAGTTGGTGGCAA
* * * * *
116147 CCTTTTGAAAAGT-CTACAAGAGCTAGG-GGCAACTTTTT
58 CCTTTTCAAAA-TCCCAC-AGAG-TTGGTGACAACCTTTT
** * * * *
116185 CAAAAGCCCACACGAGTTGGTAACAACCTCTTT-AAAGTCTACACAAGTTGTTGGCAACCTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCT-TTTCAAAATCCACACGAGTTGGTGGCAACC---TT
* * * *
116249 TTAAAAAGCCCACACGAGTTAGTAACAACCTTTT
62 TTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * * * *
116283 C-AAAGTCAACA-TATGTTGTTAGCAACCTTTTCAAAAGCCCACATGAGTTGGTAGTAACTTTTT
1 CAAAAGCCCACACGA-GTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTT
*
116346 CAAAATCACACATGAGTTGGT-AGCAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * *
116378 CAAAAAG--CACA-GAGTTGGTGACAACCTTTCCAAAATCCTACTCAAGTTGGTCGCAACATTTT
1 C-AAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTT
***
116440 CAAAATTTGACATGAGTTGGT-AGCAACC-TTT
64 CAAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * * * *
116471 CAAAGGCCCACACAAGTTGGTGGTAACCATTTCAAAAGCCCACACGAGTTAGTGGTAACCATTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * *
116536 AAAAGCCCACATGGGTTGGTGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * *
116567 -AAAGAGCTCACAAGAGTTGGTGGCAACCTTTTCAAGAGCTCATAGGAGTTGGTGGCAACCTTTT
1 CAAA-AGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTT
* * **
116631 CAAAAAT-CCACATGTGTTAGTGGTAA-CTATTT
64 C-AAAATCCCACA-GAGTTGGTGACAACCT-TTT
* * * ** * ** *
116663 C-AAAGTCTACACTAGTTAAT-GCTAACC-TTTCAAAAGTCCATAATAGTTGGTGGTAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGC-AACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTT
* * *
116725 CAAAAGCCTACGAGAGTTGGTCG-TAACCTTTT
64 CAAAATCCCAC-AGAGTTGGT-GACAACCTTTT
* * * **
116757 CAAAAGCCTACTTAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAACTCACATAAGTTGGTG
1 CAAAAGCC--C----A---CAC--GAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTG
* * *
116822 GAAACCTTTTCAAAATCCCACATGAGTTGAT-AGCAACCCTTT
54 GCAACCTTTTCAAAATCCCACA-GAGTTGGTGA-CAACCTTTT
** * * * * ** * * **
116864 CAAAAGTTCACACGAGTTGCTGACAACCCTTTCAAAGTCCACATAAGTTGTTTGCAATATTTTC-
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* ** *
116928 AGATGCCTACACA-AGTTGGTGGTAATCTTTT
66 AAAT-CC--CACAGAGTTGGTGACAACCTTTT
* * * * * *
116959 C-AATGCCTACACGAGTTGTTGGCAACCTTTTTAAAATCTCACACGAGTTGGTGGTAACCTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
* * * * **
117023 AAAAGCTCGCATGAGTTAGTGGTAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* ** * ** * * * * * * *
117054 C-CAAGTTCACACGAGTTTGTGGC-ACCATAGTCAAAGTCTACACAAGTTGGTAGTAACTTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
* * * * * **
117117 AAAAGCCTACATATGCTGCTGGTAACCTTTT
65 AAAATCCCACAGA-GTTGGTGACAACCTTTT
* * * *
117148 CAAAAG-CCACACGAGTTGGTGACAACCATTTCAAAGTCCACACGAGTTGATGGCAACC-TTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * *
117211 AAAGT-CTACAAGAGTTTGTGGCAACCTTTT
66 AAA-TCCCAC-AGAGTTGGTGACAACCTTTT
** * ** *
117241 CAAAAGCCCAAAAGCCCACAAGAGTTGGAAGCAA-CTATTTTAATGTCCATACGAGTTGGTGGCA
1 CAAAAGCCC---A---CAC--GAGTTGGTGGCAACCT-TTTCAAAATCCACACGAGTTGGTGGCA
* * * * *
117305 ACCTTTTGAAAAGT-CTACAAGAGTTAGG-GTCCATCTTTT
57 ACCTTTTCAAAA-TCCCAC-AGAGTT-GGTGACAACCTTTT
** * * * *
117344 CAAAAGCCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACCTTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC---TTT
* * * * *
117409 TAAAAAGCCCACATGAGTTAGTAATAACCTTTT
63 TCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * ** * * * * *
117442 C-AAAGTCAACATAAGTTGTTAGCAACCTTTTCAAAAGTCCACATGAGTTGGTAGTAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
*
117506 AAAATCACACACGAGTTGGT-AGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * ** * * *** *
117537 CAAAA-ACCACA-GAGTTGGTGACAACCTTTTCAAACTTTACACAAGTTGTTAAAAACTTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
**
117600 AAAGT-CCACACGAGTTAATGACAACCTTTT
66 AAA-TCCCACA-GAGTTGGTGACAACCTTTT
* * ** * * * * * *
117630 C-AATGTCCACATAACTTGTTGGCAACCTTTTCAAAAACCCACACAAGTTGGTGGCAACCATTCC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCTTTTC
*
117694 AAAATCCCACTCGAGTTGGTCG-CAACCTTTT
65 AAAATCCCAC-AGAGTTGGT-GACAACCTTTT
* ** * ** *
117725 CAAAATCTAACACGAGTTGGTAGCAACC-TTTCAAAGGCCCACACGAGTTGGTGGTAA-CTATTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-ATCCACACGAGTTGGTGGCAACCT-TTT
* *
117788 CAAAATCCCACATGAGTTGGTGGCAACCTTTG
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * *
117820 CCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGTCTAAAAGAGTTGGTGGCAATCATTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * *
117885 AAAAGCTCATACGAGTTAGT-AGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * ** * * * *
117916 CAAAGGCCCACATGAGTCAGTGGGAATCTTTTCAAAAGTCCACACGAGTTGGTAGCAACATTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * *
117981 -AAAGCCCACATGAGTTGTTGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * ** *
118011 CAAAAGCCTACATGAGTTGGTAACAACC-TTTCAAAATCCTACACGAGTTGGTAGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTTC
* * ** *
118075 AAAAGCCTACACGAGTTGGTGGTAAGCTTTGT
65 AAAATCCCACA-GAGTTGGTGACAACCTTT-T
* * * ** ** * * **
118107 -AAATGGCCACACAAGTTGGTGGCAAATTTTTCAAAGCCCAAATGAGTTATTGGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
***
118171 AAA-CCCGACAGGAGTTGGTGGTTACCTTTT
66 AAATCCC-ACA-GAGTTGGTGACAACCTTTT
** * * *
118201 CAAAAATCCACACGAGTTGGTGGGAACCTTTTCAAAAATTCACACGAGTTGGTGGTAA-CTATTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCT-TTT
* *
118265 CAAAGT-CCACATGAGTTGAT-AGCAACC-TTT
64 CAAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * ** * * * *
118295 CAAAAGTCTATAAAAGTTGGTGGCAACCTTTTTAATAGCCCAAAAGCCCACACAAATTGGTGGTA
1 CAAAAGCCCACACGAGTTGGTGGCAACC--TTT--T----CAAAA-TCCACACGAGTTGGTGGCA
* * * * *
118360 ACCATTTC-AAAGCCCACACGAGTTGATGATAACTTTTT
57 ACCTTTTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * ** * * * * **
118398 TAAAAGTCTTCAAGAGTTGGTAGCAACTTTTTCAAAAGCC-CACGTGAGTTAGG-ACCAACCTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACAC--GAGTT-GGTGGCAACCTTT
* * * * *
118461 TCAAAATCTCACATGAGTAGATGGCAACATTTT
63 TCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * ** * * *
118494 TAAAATCCCATATGAGTTGGTAGCAACCTTTTCAAAGGCTCACATGAGTTGGCGGTAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
* * * *
118559 AGAAGT-CCATATGAGTTGGTGATAACATTTT
65 A-AAATCCCACA-GAGTTGGTGACAACCTTTT
* * * ** * *
118590 C-AAAG-CCACACGAGTTGTTGTCAACCTTTTCAAAAGCCTACGTGAGTTGGTGGAAACTTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTTC
* *
118653 -AACTACCTACACA-AGTTGGTGGCAACCTTTT
65 AAAAT-CC--CACAGAGTTGGTGACAACCTTTT
*** * * ** * * *
118684 C-AAAGTGTACACGAGTTAGTGGTAACCTTTT-AAAAGGTTGACACGAGTTGGTGGTAATCATTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA--TCCACACGAGTTGGTGGCAACCTTTT
* * *
118747 CAAAGT-CCACACGAGTTGAT-AGCAACCTTTCAAAACCC
64 CAAAATCCCACA-GAGTTGGTGA-CAACCTTT-------T
* * * **
118785 CAAAAGCCTACACGAGTTGGTGGTAACCTTTTCAAAAGTCTACGA-GAGTTGGTCACAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCAC-ACGAGTTGGTGGCAACCTTTT
* * *
118849 CAAAAGCCCACACGAGTTGATAACAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * ** ** * * * * *
118881 -TAAAGTCCACATAAGTTATTGGCAACCTTTCCAAAAGCTCATACAAGTTAGTGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
*
118945 AAAAT-CTACATGAGTTGGT-AGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * ** * *
118975 CAAAAGCTCACAGGAGTTGGTGACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACATTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
*
119040 AAAGT-CCACACGAGTTGGTGGCAACCTTTT
66 AAA-TCCCACA-GAGTTGGTGACAACCTTTT
* * * * * *
119070 C-AAAGCCTACACGAGTTGTTGACAACCTTTTTAAAAGCTCACACGAGTTGGTGGTAA-CTTTTA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTT-
* * **
119133 CAAAAAGCCACACA-AGTTAGTGGTAACCTTTT
64 C-AAAATCC-CACAGAGTTGGTGACAACCTTTT
* * * ** * ** * * * **
119165 TAAAAGCCCATAGGAGTTACTGGTAACCTTTTCAATGTTCACACGGGTTTGTGGC-ACCATAGTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTTC
* * * *
119229 AAAGT-CTACATGAGTTGGT-AGTAACTTTTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * * *
119259 CAAAAGCCTACACGTGTTGATGGTAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCATTTG
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
** * * *
119324 AATGT-CCACATAAGTTGATGGCAACC-TTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * ** * * * * ** *
119353 CAAAAGTCTACAAGAGTCAGTGGCATCCATTTTAAAAGCCCAAAAGCCCATAAGAGTTGGAAGCC
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTT-------CAAAA-TCCACACGAGTTGGTGGCA
** *
119418 A-CTATTTCAATGT-CTACATGAGTTGGTGACAACCTTTT
57 ACCT-TTTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * ***
119456 GAAAAGTCTACAAGAGTTGGTAGTAACCTTTTCAAAAGCCCACACGAGTTGGTAATAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * *
119521 AAAGTCTACACA-AGTTGTTGGCAACCTTTT
65 AAAATC-CCACAGAGTTGGTGACAACCTTTT
* * ** * * * * * * *
119551 CAAAAGCTCACACAAGTTGGTGATAACTTTTTCAAAATCTCGCATGAATTAGAGGTAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
* * *
119616 AAAATCACATACATGTTGGT-AGCAACCTTTT
65 AAAATCCCACAGA-GTTGGTGA-CAACCTTTT
* ** ** * *
119647 CAAAGGCCTC-CACGAGTTTATGATAACCTTTTCGATAGTCCACACGAGTTGGTGGCAACCTTTT
1 CAAAAGCC-CACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCTTTT
* * * * * *
119711 C-GAAGCCCACGTGAGTTGTTGGCAACCTTAT
64 CAAAATCCCAC-AGAGTTGGTGACAACCTTTT
* * * * * * * *
119742 AAAAAGTCTACATGAGTTGGTAGCAACCTTTTCAAAAACCCACATGAGTTGGTAGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCTTTTC
** * *
119807 AAAA-CTGTACATGAGTTAGTGGCAA-CTATTT
65 AAAATC-CCACA-GAGTTGGTGACAACCT-TTT
* *** * ** * * *
119838 C-AAAGTCTGTAAGAGTTGACGGCAACC-TTTCAAAGTCCACAAGAGTTGGTGACAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
*
119901 AAAGCCTAAAAACCCACACGAATTGGTGACAACCATTTT
66 AAA---T-----CCCACA-GAGTTGGTGACAACC-TTTT
* * * * * * * **
119940 --GAAGTCTACACGAGTTAGTGGTAACCTTTTTAAAATTGCACAATAGTTGGTGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* *
120003 AAAAGCCCACCCGAGTTGGTGACAACCTTTT
65 AAAATCCCA-CAGAGTTGGTGACAACCTTTT
* * * * * * *
120034 C-AAAG-TCA-AC-A-TTGTTGGCAACATTTTCAAAAGCCCAAATGAGTTGGTGGTAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
** *
120094 AAAATCCCACATGAGTTGGTGGTAACTTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* ** * * * ** * *** *
120125 CAAAATCTTAAACGAATTGGTAGCAACCTTTTCAAAGGCCCACATGAGTTGGTTATAACATTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-ATCCACACGAGTTGGTGGCAACCTTTTC
* * * *
120190 AAAATTCTACACGAGTTGTTGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * * * **
120221 TAAAAGCTCGCATG-GTTTGGTGGTAACCTTTTCAAACTTCACACGCGTTTGTGGC-ACCATAGT
1 CAAAAGCCCACACGAG-TTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTT
* * * * * *
120284 CAAAGT-CCA-ACA-TT-TTCAAAAGC---T
64 CAAAATCCCACAGAGTTGGTGACAACCTTTT
* * * * * ** * ** * ** * **
120308 C---A---CACTA-G-TTGGATGGCATCATTTTTGAAGTTTATAAAAGTTAGTGGCA-CCATAGT
1 CAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTT
* * * *
120364 CAAAGT-CCACACGAGTTAGTGGCAACATTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * ** ** **
120395 CAAAAGCCCACATGAGTTGGTAGCAGCCTTATTTAAAGCCCACACGTCTTAATGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTT-TTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
** * * *
120460 AAGGTCCACACA-TGTTGGTGGCAACCTTCT
65 AAAATCC-CACAGAGTTGGTGACAACCTTTT
** * * ** * * **
120490 CAAAAGCCTAAAAGCCTACACGAGTTGGCAGTAACCTTTTCAAAAGCTGTCGCGAGTTAGTAACA
1 CAAAAG-C------CC-ACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCA
* * * * *
120555 ACCTTTTCAAAGT-CAACATAAGTTGTTGGCAACC-TTT
57 ACCTTTTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * *
120592 CGAAGGTCCACATGAGTTGGTGGCAACCTTTTCAAAATAACACATGAGTTGGTAGCAATCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAT-CCACACGAGTTGGTGGCAACCTTTTC
* * *
120657 AAAAACCCACAGTGTTGGTGACAACTTTTT
65 AAAATCCCACAGAGTTGGTGACAACCTTTT
* * * * * * * * * * *
120687 C-AAAGTCTACACAAGTTGTTGGAAACATTTTCAAAAGCCCACACGGGTTGATGACAACTTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * *
120751 AAAATCCATACA-AGTTGTTGGCAACCTTTT
65 AAAATCC-CACAGAGTTGGTGACAACCTTTT
* * * ** * *
120781 CAAAAGCTCACACGAGTTTGTGACAACCCTTTT-AAAATCTCACTTGAGTTGGTAGC-ACCTTCT
1 CAAAAGCCCACACGAGTTGGTGGCAA-CCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTT
* * **
120844 CAAAATCTCAGATGAGTTGGTGGTAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
120876 CAAAAGCGCACACGAGTTGGTGGC-ACCTTTTGCAAAAGTGCACATGTGTTGGTGGC-ACGATTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAA-TCCACACGAGTTGGTGGCAAC-CTTT
* * * *
120939 TC-AAAGCCCAAACGAGTTGTTGGCAACCTTTT
63 TCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * ** * **
120971 CAAAAGCCCACAGGAGTTGGTGGCAACCTTTACAAAGTTCACACGAGTTTATAGC-ACCATAGTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTTC
* * * **
121035 AAAGT-CTACATGAGTTGGATG-TAATATTTT
65 AAAATCCCACA-GAGTTGG-TGACAACCTTTT
* * * * * * * * * * **
121065 CAAAAGCCCATATGAGTTGCTGGTAACCTTTTTAAAGTCTATACAAGTGTGGCGGC-ACCATAGT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGT-TGGTGGCAACC-TTTT
* * * *****
121129 CAAAGTCCAAACAG-GTTGGTGGCAAAAAAGT
64 CAAAATCC-CACAGAGTTGGTGACAACCTTTT
* * * * * * *
121160 C-AAAGTCCACACGAGTTGGTGGTAACATTTTCAATA-CGACATGAGTTGGTAGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* ** * **
121223 AAAGCAGACACGAGTTTGTCG-CTGCTCTTTT
66 AAATCCCACA-GAGTTGGT-GACAAC-CTTTT
* ** ** ** * * *
121254 -TAAAGCCCACATAAGTTAATATCAACCTTTTCAAAGTCCACATGAGATGGTGGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* **
121318 AAAGTCTAAAAGCCCACACAAGTTGGTGGTAA-CTATTT
66 AAA---T-----CCCACA-GAGTTGGTGACAACCT-TTT
**** * * * *
121356 C-AAAGTTTTCACGAGTAGGTGGCAACATTTTCAAAAGTCTACGA-GAGTTGGTCGCAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCAC-ACGAGTTGGTGGCAACCTTTT
* *
121419 CAAAAGCTCACATGAGTTGGTGACAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* ** * ** * * *
121451 CAAAA-TCCACATAAGTTGTTGGCAACCACTTCAAAAGCTCACACAAGATGGTGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
*
121515 AAAATCCCACATGAGTTGGT-AGCAACCTCTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * ** * * * * * *
121546 CAAAAGCTCACACGAGTTGCTAACAACCCTTTCAAAGTCCGCACAAGTTGTTGGCAACATTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* *
121611 GAAGT-CCACACGAGTTGGTGGCAACCTTTT
66 -AAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
121641 C-AATGCCTACACGAGTTGTTGGCAACCATTTT-AAAATCTCACATGAGTTGGTGGTAA-CTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTT
* **
121703 ACAGAAA-CCAACACGAGTTGGTGGTAACCTTTT
64 -CA-AAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * * **
121736 TAAAAGCTCACATGAGTTAGTGGTAACCTTTTCAAAGTTCACACGAGTTTGTGGC-ACCATAGTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTTC
* * * *
121800 AAAGT-CTACAGGAGTTGGT-AGTAACTTTTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
** * * * * * * * * * * *
121830 CAAAAGCGTACATGTGCTGGTAGTAACCTTTTCAAAAGCCTACATGAGTTTGCGGCAACCATGTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTTC
* * *
121895 AAAGT-CCACACGAGTTGATGGCAACC-TTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
*** * * ** *
121924 CAAAAGTTTACAAGAGTTGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGAAGTA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCC---A---CAC--GAGTTGGTGGCA
** * *
121989 A-CTATTTCAATGT-CCATACGAGTTGGTGGCAACCTTTT
57 ACCT-TTTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * **
122027 GAAAAGTCTACAAGAGTTAGG-GACAACCTTTTCAAAAGCCCACATGAGTTGGTAACAACCTTTT
1 CAAAAGCCCACACGAGTT-GGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTT
* * * * * *
122091 CAAAGTCTACACA-AGTAGTTGGCAACTTTTTTTTT
64 CAAAATC-CCACAGAGTTGGTGACAAC----CTTTT
* * ** * * ** * *
122126 AAAAAGCCCACACGAGTTAGTAACAACCTTTTCAAAGTCAACATAAGTTGTTAGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * * *
122191 AAAGCCCACATAAGTTGGT-AGTAACTTTTT
66 AAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * * * *
122221 CAAAATCACATACAAGTTGGTAGCAACCTTTTCAAAAACCACA-GAGTTAGTGACAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * ** *
122285 AACT-CCACATAAGTTATTAGA-AACTTTTT
66 AAATCCCACA-GAGTTGGT-GACAACCTTTT
* * * ** * ** * * *
122314 TAAAAGTCCACACAAGTTAATGACAACCTTTTCAATGTCCACACAACTTGTTGGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * ** *
122379 AAAACCCACACAAGTTGGTGGTAACCTTTC
66 AAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * * * *
122409 CAAAATCCCACTCGAGTCGGT--C--GC---TCAAAATCCTATACGAGTAGGTAGTAA-CATTTG
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTTC
** * * ** *
122466 AAAGGCTCATACGAGTTGGTGGTAACCATTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
122497 CAAAAGCCCA-ATGGGTTAGTGGCAACCTTTGCAAAAGTCCACACGAGTTGGTGGCAACCTCTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * * *
122561 AAGAGCTCATAGGAGTTGGTGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* ** * * * * * ** *
122592 GAAAAATCTACACGTGTTAGT-GCTAA-CTATTTCAAAGTCCACACTAGTTAATGCCAACC-TTT
1 CAAAAGCCCACACGAGTTGGTGGC-AACCT-TTTCAAAATCCACACGAGTTGGTGGCAACCTTTT
* *
122654 CAAAAGT-CCACAAGAGTTGGTGGCAACTTTTT
64 CAAAA-TCCCAC-AGAGTTGGTGACAACCTTTT
* * * * *
122686 CAAAAGCCCAAAAGCCCACACGAATTAGTGGAAACCATTTCAAAGTCCACACGAGTTGGTGGCAA
1 --------CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAA
* * * * *
122751 CCTTTTCAAAAGT-CTAGAAGAGTTGGTGGCAATCATTT
58 CCTTTTCAAAA-TCCCA-CAGAGTTGGTGACAACCTTTT
* * * ** * * *
122789 CAAAAGCTCACATGAGTTGGTAGCAACCTTTTCAAAGGCCGACATGAGTCGGTGGGAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGTGGCAACCTTTTC
122854 AAAAGT-CCACACGAGTTGGT-AGCAACCTTTT
65 AAAA-TCCCACA-GAGTTGGTGA-CAACCTTTT
** * * * * *
122885 C-AAAGCCCACACGAGTTATTGGCAACCTTTTTAAAAGCTCACATGAGTTGGTGACGACC-TTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
122948 AAAATCCTGCAC-GAGTTGGT-AGCAACCTTTT
65 AAAATCC--CACAGAGTTGGTGA-CAACCTTTT
* * * * * * * * *
122979 TAAAAGCCTACAC-ATGTTGGTGGTAAGCTTTGC-AAATGGGCACACAAGTTGGTGACAACTTTT
1 CAAAAGCCCACACGA-GTTGGTGGCAACCTTTTCAAAAT--CCACACGAGTTGGTGGCAACCTTT
* * * *
123042 TC-AAAGCCCAAATGAGTTGTTGGCAACCTTTT
63 TCAAAATCCCACA-GAGTTGGTGACAACCTTTT
** * * * **
123074 CAAAAGCTGACAGGAGTTGGTGGTAACCTTTTCAAAAATCCAGACGAGTTGGCAAG-AACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGG-TGGCAACCTTTT
* *
123138 CAAAAATTCACACA-AGTTGGTGGCAA-CTATTT
64 C-AAAA-TCCCACAGAGTTGGTGACAACCT-TTT
** * * * * *** ** *
123170 C-AAAGTGCACATGAATTGATAGCAACC-TTTCAAAAGTCTGTAAAAGTTGGTAGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACC--TT-
* * * * ** *
123233 AATAGTCCAAAAGCCCACACAAATTTGTGGTAACCATTT
62 --T--T-CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * *
123272 C-AAAGCCCACACGAGTTGATGGCAACTTTTTCAAAAGTCTATAAGAGTTGGTAGCAA---TGTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * *
123333 AAAAGCCCACACGAGTTAG-CAGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * * * * * ** * **
123364 CAAAATCTCACATGAGTTGATGGAAACATTTTTAATATCCCATATAAGTTCGTAACAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAT-CCACACGAGTTGGTGGCAACCTTTTC
* **
123429 AAAA-GCCACACGAGTTGGTGGTAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * ** * * * * * * *
123459 -AAGAAGTCCATACGAGTTGGTGATAACCTTCTC-AGAGCCACACGAGTTGTTGTCAACATTTTT
1 CAA-AAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
* * * ** *
123522 AAAAGCCTACGTGAGTTGGTGGTAACTTTTT
65 AAAATCCCAC-AGAGTTGGTGACAACCTTTT
** ** * * * *
123553 CATTTA-CATACACGAGTTGGTGGCAACCTTTTCAAAGTCTACAAGAGTTGGTGGTAACCTTTT-
1 CA-AAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
* ** * *
123616 AAAAGGCCCACACGAGTTGGTGGTAATC-ATT
65 AAAA-TCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * *
123647 CCAAAGTCCACACGAGTTGATAGCAACCTTTCAAAAGCCCAAAAGCCCACACGAGTTGATAGCAA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTT-------TCAAAA-TCCACACGAGTTGGTGGCAA
*
123712 CCTTTTAAAAGCCCAAAAGCCCACACGAGTTGGT-AGCAACCTTTT
58 CCTTTT-------CAAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * * *
123757 CAAAAGTCTACGA-GAATTGGTCGCAACCTTTTCAAAAATCCACATGAATTGGTGACAACCTTTT
1 CAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCTTTT
* * * *
123821 -TAAGT-CCACATAAGTT-GTCAGCAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * *
123851 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCCACATGAGTTGGTAGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAT-CCACACGAGTTGGTGGCAACCTTTTC
* ** *
123916 AAAAGCTTACAGGAGATGGTGACAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * *
123947 C-AAAGTCCACACAAGTTGTTGGCAACATTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTGC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* ** * *
124011 -AAAGCCTGCATGAGTTGTTGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
124041 TAAAAGCTCACACGAGTTGGTGGTAA-CTTTTACAGAAAGT-CACATGAGTTGGTGGTAACCTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CA-AAA-TCCACACGAGTTGGTGGCAACCTTT
* * * ** ** *
124104 GT-AGAAGCCCATAGGAGTTATTGGTAATCTTTT
63 -TCAAAATCCCACA-GAGTTGGTGACAACCTTTT
** * ** ** * * * * *
124137 C-AAAGTTCACACGAGTTTGCAGC-ACCATAGTCAAAGTCTACA-GAGTTGGTAGTAACTTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
* * * * ** *
124199 AAAAACCTACACGTGCTGGTGGTAACTTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * *
124230 CAAAAGCCCACATGAGTTGGTGGCAACCATTTGAAAGTCCACATGAGTTGATGGCAACC-TTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * *
124294 AAAGT-CTACAAGAGTTGGTGGCAGCCTTTT
66 AAA-TCCCAC-AGAGTTGGTGACAACCTTTT
** ** ** * *
124324 CAAAAGCCCAAAAGCCCATAAAAGTTGGAAGTTA-CTATTTCAATATCCACACGAGTTGGTGGTA
1 CAAAAGCCC---A---C--ACGAGTTGGTGGCAACCT-TTTCAAAATCCACACGAGTTGGTGGCA
* * * *
124388 ACCTTTTGAAAAGT-CTACAAGAGTTGGT-AGTAACCTTTA
57 ACCTTTTCAAAA-TCCCAC-AGAGTTGGTGA-CAACCTTTT
* ** * * * *
124427 CAAAAGTCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * *
124492 AAAGCCCACACGAGTTGGTGATAACTTTTT
66 AAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * ** * * * *
124522 CAATATCTCGCATTAGTTGGTGGTAACCTTTTCAAAATCACATAC-ATGTTGGTAGAAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGA-GTTGGTGGCAACCTTTT
** * * * *
124586 CAAAGGCCTATATGAGTTTGTGATAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* ** * * ** * * * *
124618 CAATAGTTCACACAAGTTGGTGGCAGCCTTTTCAAAGCCCACGCGAGTTGTTGGCAACCTTATAA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
*
124683 AAAGT-CCACACGAGTTGGTGGCAACCTTTT
66 AAA-TCCCACA-GAGTTGGTGACAACCTTTT
** * * * * *
124713 CAAAAATCCATATGAGTTGGTAGCAACCTTTTCAAAACTCTACATGAGTTGGTGGCAA-CTATTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCT-TTT
* * * **
124777 CAAAGTCCACACA-AGTTGTTGGCAATATTTT
64 CAAAATCC-CACAGAGTTGGTGACAACCTTTT
* * ** *
124808 CAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCATTTT-
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTTC
** * *
124872 AAAAGCTCAAACA-AGTTGTTGGCAA-CTTTT
65 AAAA--TCCCACAGAGTTGGTGACAACCTTTT
* ** * * * *
124902 ACAAAAACCCACACGAGTTGGTGATAACCTTTTTAAAAGCC-CATTCGAGTTAGTGGTAACCTTT
1 -CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACA--CGAGTTGGTGGCAACCTTT
* * * ** **
124966 TCAAAGT-TCACACGAGTTTGTG-GTACCATAAT
63 TCAAAATCCCACA-GAGTTGGTGACAACC-TTTT
* * * * * * * ** * * *
124998 C-AAAGTCTACACAAGTTAGTGGTAACGTTTTTAAAAGTTGACAGGAGTTGATGGCAACCATTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * *
125062 AAAAGCCCACAAGAATTAGTGGCAACCTTTT
65 AAAATCCCAC-AGAGTTGGTGACAACCTTTT
* ** * * * * * * * *
125093 -TAAAGTTCATATGAGTTGGTGGTAACCTTTTCAAAAGCCCACACAAATT-GTCGGTAGCCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGT-GGCAACCTTTT
* *
125156 TAAAAGT-CCACACGAGTTGATGACAACCTTTT
64 CAAAA-TCCCACA-GAGTTGGTGACAACCTTTT
* * * * * ** * * *
125188 C-AAAGTCCACATGAATTGGGGGCAATCTTTTCAAAGGCCCACACAAGTTGGTGGTAACATTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-ATCCACACGAGTTGGTGGCAACCTTTTC
* *
125252 AAAAGT-CCACACTAGTTGGTGAAAACCTTTT
65 AAAA-TCCCACA-GAGTTGGTGACAACCTTTT
** * ** * * *
125283 C-AAAG-CTGCACGAGTTGTTGGCAACCTTTTCGAAAGCCCACATGAGTTAGTGGCAACTTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAATCCACACGAGTTGGTGGCAACCTTTTC
* *
125346 AACAA-CCCACAAGAGTTGGTGGCAACTTTTT
65 AA-AATCCCAC-AGAGTTGGTGACAACCTTTT
* * * * * * * * * **
125377 TAAAAGCCCACACGATTTGGCGACAACTTTTTCAAAGTTCACACAAGTTTGTGGC-ACCATAGTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTTC
* * ** *
125441 AAAGT-CCACAAGAGTTAGTGGTAACATTTT
65 AAAATCCCAC-AGAGTTGGTGACAACCTTTT
* * * ** * * * * * *
125471 AAAAAGTCTACATAAGTTGATTGCAACCATTTCAAAAGCCCACACGAATTGGTGGCAACCTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * *
125536 AAAGT-CCATATGACTTGGTGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* ** * * ** * * * * *
125566 CAAAAGACTGCACGTGCTATTGG-AAGCTTTTTTAAAAGCCCACATGAGTTGATGGCAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAA-CCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTT
* * *
125630 CAAAGT-CCACATAAGTTAGG-GGCAACCTTTT
64 CAAAATCCCACA-GAGTT-GGTGACAACCTTTT
* * * * * ** **
125661 C-AAAGCCCACACAAATTGG-GAGCAACCTTTTCAAAGTTCACATGAGTTTATGGC-ACCATAGT
1 CAAAAGCCCACACGAGTTGGTG-GCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACC-TTTT
* * * * * * *
125723 CAAAGT-CTA-ACA-TT-TTCAGAAGC---T
64 CAAAATCCCACAGAGTTGGTGACAACCTTTT
* * *** * * * ** *** * * *
125747 C-ACA--CGAGTTG-G-TGGT--AACCTTTTCAAAGTCCACACAAGTTGTT-G-G-CAACATTTA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACG-AGTTGGTGGCAACCTTT-
* * * * *
125802 T-AAAAGCCCAGAAGACTTGGAGAAAACCTTTT
63 TCAAAATCCCA-CAGAGTTGGTGACAACCTTTT
* ** * ** * * *
125834 CAAAATCTGACATGAGTTAATGGC-A---TTTCAAAATCCTGCATGAGTTGGTAGG-AAACTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCC-ACACGAGTTGGT-GGCAACCTTTT
** * ** *
125894 CAAAGGCCCAAATGAGTTGGTGGTATCCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * ** *** * *
125926 CAAAAGGCCACCCGAGTTGGTGGCAACCTTTTCAAAGCCCTTGCGAGTTGTTGGCAATCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* *
125991 AAAGCCCATATGAGTTGGT-AGCAACCTTTT
66 AAATCCCACA-GAGTTGGTGA-CAACCTTTT
* * * * * ** **
126021 TAAAA-CCTACACGAGTTTGTGGGAACCTTTTTTAAAGCCCACACGAGTTGGCAGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
** * * * **
126085 AAGGT-TCACAAAAGTTTGTGAC-ACCATAGT
65 AAAATCCCAC-AGAGTTGGTGACAACC-TTTT
* * * * *** *
126115 C-AAAGTCCACATGAGTTGGTGGTAACATTTTCAAAAGTCTGTACGAGTTGGTGGCAACCTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * *
126179 AAAAGCCCACCCGAGTTAGTGGCAACCTTTT
65 AAAATCCCA-CAGAGTTGGTGACAACCTTTT
* * * * * * * * * *
126210 -GAAAGTCCATATGAGTTGGTGGCAACCTTTTCAAAAGCCCACACAAGTTGTTGGTAGCCTTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * * **
126274 AAAATGCTACAATAGTTGATGGTAACCTTTT
65 AAAATCCCAC-AGAGTTGGTGACAACCTTTT
* * ** * * *
126305 C-AAAGCCCAAATGAGTTGAG-GGCAACCTTTTCAAAGCCCGCACGAATTGGGGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTG-GTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
* * ** *
126368 -AAATCCCACACCAGTTTGTG-GTACTTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
** * * * * * * *
126397 C-AAAGTTCACACAAGTTTGTGGC-ACCATAGTT-AAAGTCTA-AC-A-TT-TTCAG-AAGCC--
1 CAAAAGCCCACACGAGTTGGTGGCAACC-T-TTTCAAAATCCACACGAGTTGGT-GGCAA-CCTT
*
126452 -T----A---CACA-AGTTGGTGGCAACCTTTT
62 TTCAAAATCCCACAGAGTTGGTGACAACCTTTT
* *** ** ** * * * *
126476 C-AAAGTCTGTAAAAGTTGGTGGC-ACCATAGTGAAAGTCCACACGAGTTGGTGGCAACATTCTC
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTC
* * * *
126539 AAAAACTCACATGAGTTGATGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * ** *
126570 CAAAGGCCTACATGAGTTGGTAGCAGCCTTTTCAAAGTCCACAAAAGTTGTTGGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* *
126635 AAAGCCCACATGAGTTGGTGGCAACCTTTT
66 AAATCCCACA-GAGTTGGTGACAACCTTTT
** * * * * * * *
126665 CAAAATTCAACATGAGTTTGTGGCAAAC-TTTCAAAATCCCACATGAGTTAGTAGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAT-CCACACGAGTTGGTGGCAACCTTTTC
* * * *** *
126729 AAAAGCCTATACGAGTTGGTG-CTATGGTTTG
65 AAAATCCCACA-GAGTTGGTGAC-AACCTTTT
* * * * * ** * * *
126760 CAAATGGCCGCACGAGTTGGTGGTAACTTTTTCAAAGCCCAAACGAGTTGTTGGTAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* * *
126825 AAAGT-CGACAAGAGTTGATGGCAACCTTTT
66 AAA-TCCCAC-AGAGTTGGTGACAACCTTTT
** * * *
126855 CAAAAATCCACACGAGTTGGTGGTAACCTTTTTAAAAATCCACACGAGTTGGTGGTAA-CTATTT
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAATCCACACGAGTTGGTGGCAACCT-TTT
* * * *
126919 CAAAGT-CCACATGAGTTGATGGCAA-CGTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * *
126949 CAAAAGTCCACAAGAGTTGATGGCAACTTTTTCAAAAGCCCAAAAGCCCACATGAATTGTTGGCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCC---A---CAC--GAGTTGGTGGCA
* *
127014 ACCATTTC-AAA-CCCTACACGAGTTGGTGGCAACCTTTT
57 ACCTTTTCAAAATCCC-ACA-GAGTTGGTGACAACCTTTT
* * * * * * * * ** * *
127052 CAAAAGTCTACAAGAGTTGGTGGCAACCGTTGCAAAAGCTTACACGAGTTAGTGATAACTTTTTG
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
* * * *
127117 AAAGT-CCACACTAGTTGTTGGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * *
127147 CAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGTAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAT-CCACACGAGTTGGTGGCAACCTTTTC
* *
127212 AAAATCTCACACGAATTGGT-AGCAACCTTTT
65 AAAATCCCACA-GAGTTGGTGA-CAACCTTTT
* ** ** * * ***
127243 CGAAAGCCCACATAAGTTGGTGATAACCTTTTTAAAAATCAATTTGAGTTGGTGGCTAA-CTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAATCCACACGAGTTGGTGGC-AACCTTTT
* * * *
127307 TAAAA-CCTCGCTTGAGTTGGTGGCAACCTTTT
64 CAAAATCC-CAC-AGAGTTGGTGACAACCTTTT
*** * * * * *
127339 CAAAA-TTTACACGAGTTTGTATCATAGTCAAAGTCTAACATTTTTAGAAGTTCACAC-AGTTGG
1 CAAAAGCCCACACGAG-TTG-------GT----GGC-AACCTTTTCA-AAATCCACACGAGTTGG
* * * * * ** **
127402 TGGCAACCTTTTCAAAGT-CTATAAAAGTTTGTG-GTACCATAGT
52 TGGCAACCTTTTCAAAATCCCA-CAGAGTTGGTGACAACC-TTTT
* * * * * **
127445 C-AAAGTCCACACAAGTTGGTGGCAACATTTTCAAAAGCCCACATGAGTTGAAGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * * * *
127509 AAAAGCCCACACAAGTTGATGGCAACATTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* ** * * * * ** * *
127540 C-AATGTGCAAACGAGTTGGTGTCAGCCATTTTTTAAAGCCCACACAAGTTGATGGCAACCTTTT
1 CAAAAGCCCACACGAGTTGGTGGCAACC--TTTTCAAAATCCACACGAGTTGGTGGCAACCTTTT
** * *
127604 CAATGT-GCACACGAGTTGGTGGCAACCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * ** *
127635 CAAAAGCCGAAAGGCCCATTAGAGTTGGTGGTAACCTTTTTAAAAGTTTACGA-GAGTTGGTGGT
1 CAAAAGCC------CACA--CGAGTTGGTGGCAACCTTTTCAAAA-TCCAC-ACGAGTTGGTGGC
* * *
127699 AACCTTTTCAAAAGCCCACACGAGTTAGTGATAACCTTTT
56 AACCTTTTCAAAATCCCACA-GAGTTGGTGACAACCTTTT
*** * * * * * *
127739 C-AAAGTTAACACAAGTTGTTGGCAGCCTTTTTAAAAGTGCACATGAGTTGGTGGCAACCTTTTC
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAA-TCCACACGAGTTGGTGGCAACCTTTTC
* * *
127803 AAAAGT-CTATGAGAGCTGGTCG-CAACCTTTT
65 AAAA-TCCCA-CAGAGTTGGT-GACAACCTTTT
* * ** *
127834 CAAAAGCCCACACGAGTTAGTGACAACCTTTTCAAAATCCACATAAGTTGTTGGCAACCTTTTCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
* *
127899 AAAGCTCTTC-CA-AGTTGGTGACAATCTTTT
66 AAA--TC-CCACAGAGTTGGTGACAACCTTTT
** * * * * * * * * *
127929 CAAAATTCCACATGAGTTGATAGCAAACTTTTCAAAAGCTCATACGAGTTGGTGACATCCTTTTG
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTTC
* * * * **
127994 AAAGT-CCACACCAGTTGTTGGCAATATTTT
65 AAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * *
128024 CAAAAGTCCACACGAGTTGGTGGTAACCTTTTTAAAAGCTCACACGAGTTGCTGGCAA-CTTTTA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATC-CACACGAGTTGGTGGCAACCTTTT-
* * ** *
128088 CAAAAACCCACACGAATTGGTGGTACCCTTTT
64 CAAAATCCCACA-GAGTTGGTGACAACCTTTT
* * * * * * * *
128120 TAAAAACCCACAGGAGTTGGTGGTAACCTTTTCAAAGTTCACACGGGTTTGTGGCA
1 CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCA
128176 CCATAGTCAA
Statistics
Matches: 10654, Mismatches: 2899, Indels: 1666
0.70 0.19 0.11
Matches are distributed among these distances:
78 8 0.00
79 40 0.00
80 60 0.01
81 10 0.00
82 14 0.00
83 8 0.00
84 10 0.00
85 1 0.00
86 5 0.00
87 10 0.00
88 48 0.00
89 24 0.00
90 27 0.00
91 139 0.01
92 212 0.02
93 537 0.05
94 2051 0.19
95 4102 0.39
96 1520 0.14
97 177 0.02
98 119 0.01
99 47 0.00
100 35 0.00
101 74 0.01
102 581 0.05
103 560 0.05
104 54 0.01
105 10 0.00
106 30 0.00
107 84 0.01
108 7 0.00
109 19 0.00
110 30 0.00
111 1 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (94 bp):
CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCCACACGAGTTGGTGGCAACCTTTTCA
AAATCCCACAGAGTTGGTGACAACCTTTT
Found at i:115023 original size:71 final size:71
Alignment explanation
Indices: 114903--115041 Score: 188
Period size: 71 Copynumber: 2.0 Consensus size: 71
114893 TTGTAACTAT
* * * * *
114903 AAAAGTCCACACGAGTTAATGCCAACCTTTTAAAAGTCCACAAGAGTTGGTGGCAACCTTTTCAA
1 AAAAGCCCACACGAATTAATGACAACCATTTAAAAGTCCACAAGAGTTGGTGACAACCTTTTCAA
114968 AAGCCC
66 AAGCCC
* * * * *
114974 AAAAGCCCACACGAATTAGTGACAACCATTTCAAAGTCCATATGGGTTGGTGACAACCTTTTCAA
1 AAAAGCCCACACGAATTAATGACAACCATTTAAAAGTCCACAAGAGTTGGTGACAACCTTTTCAA
115039 AAG
66 AAG
115042 TCTAGAAGAG
Statistics
Matches: 58, Mismatches: 10, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
71 58 1.00
ACGTcount: A:0.36, C:0.24, G:0.17, T:0.23
Consensus pattern (71 bp):
AAAAGCCCACACGAATTAATGACAACCATTTAAAAGTCCACAAGAGTTGGTGACAACCTTTTCAA
AAGCCC
Found at i:116184 original size:102 final size:103
Alignment explanation
Indices: 115988--116194 Score: 285
Period size: 102 Copynumber: 2.0 Consensus size: 103
115978 GTAACCTTTT
* **
115988 CAAAAGCCCACACGAGTTGGTGGCAACCATTTCAAAGTCCACACGAGTTGATGGCAACCTTTCAA
1 CAAAAGCCCACAAGAGTTGGAAGCAACCATTTCAAAGTCCACACGAGTTGATGGCAACCTTTCAA
*
116053 AAGTCTACAAGAGTTGGTGGCAACTTTTTT-AAAAGCC
66 AAGTCTACAAGAGTAGGTGGCAACTTTTTTCAAAAGCC
* * * * * *
116090 CAAAAGCCCACAAGATTTGGAAGCAACTATTTCAATGTCCACACGAGTTGGTGGTAACCTTTTGA
1 CAAAAGCCCACAAGAGTTGGAAGCAACCATTTCAAAGTCCACACGAGTTGATGGCAACC-TTTCA
116155 AAAGTCTACAAGAGCTAGG-GGCAAC-TTTTTCAAAAGCC
65 AAAGTCTACAAGAG-TAGGTGGCAACTTTTTTCAAAAGCC
116193 CA
1 CA
116195 CACGAGTTGG
Statistics
Matches: 92, Mismatches: 10, Indels: 5
0.86 0.09 0.05
Matches are distributed among these distances:
102 56 0.61
103 33 0.36
104 3 0.03
ACGTcount: A:0.33, C:0.23, G:0.20, T:0.24
Consensus pattern (103 bp):
CAAAAGCCCACAAGAGTTGGAAGCAACCATTTCAAAGTCCACACGAGTTGATGGCAACCTTTCAA
AAGTCTACAAGAGTAGGTGGCAACTTTTTTCAAAAGCC
Found at i:118428 original size:102 final size:103
Alignment explanation
Indices: 118249--118439 Score: 246
Period size: 102 Copynumber: 1.9 Consensus size: 103
118239 TTCACACGAG
* * *
118249 TTGGTGGTAACTATTTCAAAGTCCACATGAGTTGATAGCAACCTTTCAAAAGTCTATAAAAGTTG
1 TTGGTGGTAACCATTTCAAAGCCCACACGAGTTGATAGCAACCTTTCAAAAGTCTATAAAAGTTG
* *
118314 GTGGCAACCTTTTT-AATAGCCCAAAAGCCCACACAAA
66 GTAGCAACCTTTTTCAAAAGCCCAAAAGCCCACACAAA
* * * *
118351 TTGGTGGTAACCATTTCAAAGCCCACACGAGTTGAT-GATAACTTTTTTAAAAGTCT-TCAAGAG
1 TTGGTGGTAACCATTTCAAAGCCCACACGAGTTGATAG-CAAC-CTTTCAAAAGTCTAT-AAAAG
118414 TTGGTAGCAA-CTTTTTCAAAAGCCCA
63 TTGGTAGCAACCTTTTTCAAAAGCCCA
118440 CGTGAGTTAG
Statistics
Matches: 76, Mismatches: 9, Indels: 7
0.83 0.10 0.08
Matches are distributed among these distances:
101 1 0.01
102 43 0.57
103 32 0.42
ACGTcount: A:0.34, C:0.20, G:0.17, T:0.29
Consensus pattern (103 bp):
TTGGTGGTAACCATTTCAAAGCCCACACGAGTTGATAGCAACCTTTCAAAAGTCTATAAAAGTTG
GTAGCAACCTTTTTCAAAAGCCCAAAAGCCCACACAAA
Found at i:118846 original size:71 final size:71
Alignment explanation
Indices: 118724--118858 Score: 177
Period size: 70 Copynumber: 1.9 Consensus size: 71
118714 TAAAAGGTTG
*
118724 ACACGAGTTGGTGGTAATCATTTCAAAGTCCACACGAGTTGATAGCAACC-TTTCAAAACCCCAA
1 ACACGAGTTGGTGGTAACCATTTCAAAGTCCACACGAGTTGATAGCAACCTTTTCAAAACCCCAA
118788 AAGCCT
66 AAGCCT
* * * *
118794 ACACGAGTTGGTGGTAACCTTTTCAAAAGTCTACGA-GAGTTGGTCA-CAACCTTTTCAAAAGCC
1 ACACGAGTTGGTGGTAACCATTTC-AAAGTCCAC-ACGAGTTGAT-AGCAACCTTTTCAAAACCC
118857 CA
63 CA
118859 CACGAGTTGA
Statistics
Matches: 56, Mismatches: 5, Indels: 6
0.84 0.07 0.09
Matches are distributed among these distances:
70 22 0.39
71 20 0.36
72 14 0.25
ACGTcount: A:0.33, C:0.24, G:0.19, T:0.24
Consensus pattern (71 bp):
ACACGAGTTGGTGGTAACCATTTCAAAGTCCACACGAGTTGATAGCAACCTTTTCAAAACCCCAA
AAGCCT
Found at i:119756 original size:159 final size:158
Alignment explanation
Indices: 117406--119810 Score: 406
Period size: 158 Copynumber: 15.1 Consensus size: 158
117396 GGCAACCTTT
* * * * * *
117406 TTTTAAAAAGCCCACATGAGTT-AGTAATAACCTTTTCAAAGTCAACATAAGTTGTTAGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGA-TAATAACCTTTTCAAAGTCCACACAAGTTGGTGGCAACCT
* ** * * * * * * *
117470 TTTCAAAAGTCCACATGAGTTGGT-AGTAACCTTTTCAAAATCACACACGAGTTGGTAGCAACCT
65 TTTCAAAAGCCCACACAAGTTGGTGA-CAACCTTATAAAAATCTCACATGAATTAGTAGCAACCT
*
117534 TTTCAAAAAC-CACAGAGTTGGT-GACAACC
129 TTTCAAAAACACACATAGTTGGTAG-CAACC
** * * * * * ** *
117563 TTTTC-AAA-CTTTACACAAGTTGTTAAAAACTTTTTCAAAAGTCCACACGAGTTAATGACAACC
1 TTTTCAAAAGC-CCACACGAGTTGATAATAACCTTTTC-AAAGTCCACACAAGTTGGTGGCAACC
* * * * * * * * * * *
117626 TTTTC-AATGTCCACATAACTTGTTGGCAACCTTTTCAAAAA-CCCACA-CAAGTTGGTGGCAAC
64 TTTTCAAAAGCCCACACAAGTTGGTGACAACCTTAT-AAAAATCTCACATGAA-TTAGTAGCAAC
* * * * *
117688 CATTCCAAAATCCCAC-TCGAGTTGGTCGCAACC
127 CTTTTCAAAAACACACAT--AGTTGGTAGCAACC
* ** * ** * * *
117721 TTTTCAAAATCTAACACGAGTTGGTAGCAACC-TTTCAAAGGCCCACACGAGTTGGTGGTAA-CT
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTCAAA-GTCCACACAAGTTGGTGGCAACCT
* ** * * * * * * *
117784 ATTTCAAAATCCCACATGAGTTGGTGGCAACCTT-TGCCAAAGTC-CACACGAGTTGGTGGCAAC
65 -TTTCAAAAGCCCACACAAGTTGGTGACAACCTTAT--AAAAATCTCACATGAATTAGTAGCAAC
* * * * *
117847 CTTTTCAAAAGTCTA-AAAGAGTTGGTGGCAATC
127 CTTTTCAAAA-AC-ACACATAGTTGGTAGCAACC
* * * ** * ** * *
117880 ATTTCAAAAGCTCATACGAGTT-AGTAGCAACCTTTTCAAAGGCC-CACATGAGTCAGTGGGAAT
1 TTTTCAAAAGCCCACACGAGTTGA-TAATAACCTTTTCAAAGTCCACACA--AGTTGGTGGCAAC
* * * ** * * * *
117943 CTTTTCAAAAGTCCACACGAGTTGGT-AGCAACATT-TTCAAAGCCCACATGAGTT-GTTGGCAA
63 CTTTTCAAAAGCCCACACAAGTTGGTGA-CAACCTTATAAAAATCTCACATGAATTAG-TAGCAA
* *
118005 CCTTTTCAAAAGC-CTACATGAGTTGGTAACAACC
126 CCTTTTCAAAAACAC-ACAT-AGTTGGTAGCAACC
* * * ** * * *
118039 -TTTCAAAATCCTACACGAGTTGGTAGCAACCTTTTCAAAAG-CCTACACGAGTTGGTGGTAAGC
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTC-AAAGTCC-ACACAAGTTGGTGGCAACC
* * * * * ** * * * * * *
118102 TTTGT-AAATGGCCACACAAGTTGGTGGCAA-ATTTTTCAAAGCCCAAATGAGTTATTGGCAACC
64 TTT-TCAAAAGCCCACACAAGTTGGTGACAACCTTATAAAAATCTCACATGAATTAGTAGCAACC
* * * **
118165 TTTTC-AAAACCCGACAGGAGTTGGTGGTTACC
128 TTTTCAAAAACAC-ACA-TAGTTGGTAGCAACC
** * *** * * * *
118197 TTTTCAAAAATCCACACGAGTTGGTGGGAACCTTTTCAAAAATTCACACGAGTTGGTGGTAA-CT
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTC-AAAGTCCACACAAGTTGGTGGCAACCT
* ** * * * * * *
118261 ATTTC-AAAGTCCACATGAGTTGAT-AGCAACCTT-TCAAAAGTCT-ATA-AAAGTTGGTGGCAA
65 -TTTCAAAAGCCCACACAAGTTGGTGA-CAACCTTAT-AAAAATCTCACATGAA-TTAGTAGCAA
* * * *
118321 CCTTTTTAATAGCCCAAAAGCCCACACA-AATTGGTGGTAACC
126 CC--TTT--T----CAAAA--ACACACATAGTTGGTAGCAACC
* * * * ** * *
118363 ATTTC-AAAGCCCACACGAGTTGATGATAACTTTTTTAAAAGTCTTCA-AGAGTTGGTAGCAACT
1 TTTTCAAAAGCCCACACGAGTTGATAATAAC-CTTTTCAAAGTCCACACA-AGTTGGTGGCAACC
*** * * * * *
118426 TTTTCAAAAGCCCACGTGAGTTAG-GACCAACCTTTTCAAAATCTCACATG-AGTAGATGGCAAC
64 TTTTCAAAAGCCCACACAAGTTGGTGA-CAACCTTATAAAAATCTCACATGAATTAG-TAGCAAC
* * * * *
118489 ATTTTTAAAATCCCATATGAGTTGGTAGCAACC
127 CTTTTCAAAAACACACAT-AGTTGGTAGCAACC
* * * **** * ** ** *
118522 TTTTCAAAGGCTCACATGAGTTGGCGGTAACCTTTTCAGAAGTCCATATGAGTTGGTGATAACAT
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTCA-AAGTCCACACAAGTTGGTGGCAACCT
* * * * * * * * * * * *
118587 TTTC-AAAG-CCACACGAGTTGTTGTCAACCTTTTCAAAAGC-CTACGTGAGTTGGTGGAAACTT
65 TTTCAAAAGCCCACACAAGTTGGTGACAACCTTATAAAAATCTC-ACATGAATTAGTAGCAACCT
* * *
118649 TTTCAACTACCTACACA-AGTTGGTGGCAACC
129 TTTCAA-AAAC-ACACATAGTTGGTAGCAACC
*** ** * ** * * *
118680 TTTTC-AAAGTGTACACGAGTT-AGTGGTAACCTTTTAAAAGGTTGACACGAGTTGGTGGTAATC
1 TTTTCAAAAGCCCACACGAGTTGA-TAATAACCTTTTCAAA-GTCCACACAAGTTGGTGGCAACC
* * * * * * * * *
118743 ATTTC-AAAGTCCACACGAGTTGAT-AGCAACCTTTCAAAACCCCAAAAGC-CTACACGAGTTGG
64 TTTTCAAAAGCCCACACAAGTTGGTGA-CAACC-TT--ATA----AAAATCTC-ACATGAATTAG
* * * * *
118805 TGGTAACCTTTTCAAAAGTCTAC-GAGAGTTGGTCA-CAACC
120 TAGCAACCTTTTCAAAA-AC-ACACATAGTTGGT-AGCAACC
* * * **
118845 TTTTCAAAAGCCCACACGAGTTGATAACAACCTTTTTAAAGTCCACATAAGTTATTGGCAACCTT
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTCAAAGTCCACACAAGTTGGTGGCAACCTT
* * * * * * * * *
118910 TCCAAAAGCTCATACAAGTTAGTGGCAACCTTTTCAAAATCT-ACATGAGTTGGTAGCAACCTTT
66 TTCAAAAGCCCACACAAGTTGGTGACAACCTTATAAAAATCTCACATGAATTAGTAGCAACCTTT
* * *
118974 TCAAAAGCTCACAGGAGTTGGT-GACAACC
131 TCAAAAACACACA-TAGTTGGTAG-CAACC
* ** * *** * *
119003 TTTTC-AAAGTCCACATAAGTTGTTGGCAACATTTTCAAAAGTCCACACGAGTTGGTGGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTC-AAAGTCCACACAAGTTGGTGGCAACCT
* * * * * * * * * * *
119067 TTTC-AAAGCCTACACGAGTTGTTGACAACCTTTTTAAAAGCTCACACGAGTTGGTGGTAA-CTT
65 TTTCAAAAGCCCACACAAGTTGGTGACAACCTTATAAAAATCTCACATGAATTAGTAGCAACCTT
* * *
119130 TTACAAAAAGCCACACA-AGTTAGTGGTAACC
130 TT-CAAAAA--CACACATAGTTGGTAGCAACC
* * * ** * * ** *
119161 TTTTTAAAAGCCCATAGGAGTT-ACTGGTAACCTTTTCAATGTTCACACGGGTTTGTGGC-ACCA
1 TTTTCAAAAGCCCACACGAGTTGA-TAATAACCTTTTCAAAGTCCACACAAGTTGGTGGCAACC-
** * * ** * * * ** * * *
119224 TAGTC-AAAGTCTACATGAGTTGGT-AGTAACTTTTTCAAAAGCCTACACGTG--TT-GATGGTA
64 TTTTCAAAAGCCCACACAAGTTGGTGA-CAACCTTAT-AAAAATCT-CACATGAATTAG-TAGCA
* * * *
119284 ACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACC
125 ACCTTTTCAAAAACACACA-TAGTTGGTAGCAACC
* * * * ** *** * ** *
119319 ATTT-GAATGTCCACATAAGTTGATGGCAACC-TTTCAAAAGTCTACA-AGAGTCAGTGGCATCC
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTC-AAAGTCCACACA-AGTTGGTGGCAACC
* * * *** * *
119381 ATTTT-AAAAGCCCA-A-AAGCCCATAAGAGTTGGA-AGCCACTATTTCAATGTCTACATGAGTT
64 -TTTTCAAAAGCCCACACAAG----T-TG-G-T-GACAACC-TTATAAAAATCTC-ACATGAATT
* * * * *
119442 GGT-GACAACCTTTTGAAAAGTCTACA-AGAGTTGGTAGTAACC
118 AGTAG-CAACCTTTTCAAAA-AC-ACACATAGTTGGTAGCAACC
* * *
119484 TTTTCAAAAGCCCACACGAGTTGGTAATAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACCTT
1 TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTCAAAGTCCACACAAGTTGGTGGCAACCTT
* * * * * * *
119549 TTCAAAAGCTCACACAAGTTGGTGATAACTTTTTCAAAATCTCGCATGAATTAG-AGGTAACCTT
66 TTCAAAAGCCCACACAAGTTGGTGACAACCTTATAAAAATCTCACATGAATTAGTA-GCAACCTT
*
119613 TTCAAAATCACATACAT-GTTGGTAGCAACC
130 TTCAAAA--ACACACATAGTTGGTAGCAACC
* * * * *
119643 TTTTCAAAGGCCTC-CACGAGTTTATGATAACCTTTTCGATAGTCCACACGAGTTGGTGGCAACC
1 TTTTCAAAAGCC-CACACGAGTTGATAATAACCTTTTC-AAAGTCCACACAAGTTGGTGGCAACC
* *** * * * *
119707 TTTTC-GAAGCCCACGTGAGTTGTTGGCAACCTTATAAAAAGTCT-ACATGAGTTGGTAGCAACC
64 TTTTCAAAAGCCCACACAAGTTGGTGACAACCTTATAAAAA-TCTCACATGAATTAGTAGCAACC
*
119770 TTTTCAAAAACCCACATGAGTTGGTAGCAACC
128 TTTTCAAAAACACACAT-AGTTGGTAGCAACC
119802 TTTTCAAAA
1 TTTTCAAAA
119811 CTGTACATGA
Statistics
Matches: 1666, Mismatches: 424, Indels: 314
0.69 0.18 0.13
Matches are distributed among these distances:
155 2 0.00
156 82 0.05
157 203 0.12
158 457 0.27
159 416 0.25
160 154 0.09
161 6 0.00
162 4 0.00
163 11 0.01
164 6 0.00
165 150 0.09
166 144 0.09
167 23 0.01
168 6 0.00
169 2 0.00
ACGTcount: A:0.32, C:0.22, G:0.18, T:0.28
Consensus pattern (158 bp):
TTTTCAAAAGCCCACACGAGTTGATAATAACCTTTTCAAAGTCCACACAAGTTGGTGGCAACCTT
TTCAAAAGCCCACACAAGTTGGTGACAACCTTATAAAAATCTCACATGAATTAGTAGCAACCTTT
TCAAAAACACACATAGTTGGTAGCAACC
Found at i:123700 original size:39 final size:39
Alignment explanation
Indices: 123649--123762 Score: 192
Period size: 39 Copynumber: 2.9 Consensus size: 39
123639 TAATCATTCC
*
123649 AAAGTCCACACGAGTTGATAGCAACCTTTCAAAAGCCCA
1 AAAGCCCACACGAGTTGATAGCAACCTTTCAAAAGCCCA
*
123688 AAAGCCCACACGAGTTGATAGCAACCTTTTAAAAGCCCA
1 AAAGCCCACACGAGTTGATAGCAACCTTTCAAAAGCCCA
*
123727 AAAGCCCACACGAGTTGGTAGCAACCTTTTCAAAAG
1 AAAGCCCACACGAGTTGATAGCAACC-TTTCAAAAG
123763 TCTACGAGAA
Statistics
Matches: 70, Mismatches: 4, Indels: 1
0.93 0.05 0.01
Matches are distributed among these distances:
39 62 0.89
40 8 0.11
ACGTcount: A:0.38, C:0.27, G:0.17, T:0.18
Consensus pattern (39 bp):
AAAGCCCACACGAGTTGATAGCAACCTTTCAAAAGCCCA
Found at i:123936 original size:126 final size:127
Alignment explanation
Indices: 123725--128060 Score: 453
Period size: 127 Copynumber: 34.3 Consensus size: 127
123715 TTTAAAAGCC
* * * * *
123725 CAAAAGCCCACACGAGTTGGTAGCAACCTTTTCAAAAGT-CTACGA-GAATTGGTCGCAACCTTT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAA-TCCTAC-ATGAGTTGGTAGCAACCTTT
* * * * *
123788 TCAAAA-ATCCACATGA-ATTGGTGACAACCTTTT-TAAGTCCACATAAGTTGTCAGCAACCTTT
64 TCAAAAGCT-CACACGAGA-TGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTT
123850 T
127 T
*
123851 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCCACATGAGTTGGTAGCAACCTTTTC
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTTC
* * **
123916 AAAAGCTTACAGGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACATTTT
66 AAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTTT
* * * * *
123978 CAAAAG-TC-CACATGAGTTGGTGGCAACCTTTGC-AAAGCCTGCATGAGTTGTTGGCAACCTTT
1 CAAAAGCTCACACA--AGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTT
* * ** ** * * *
124040 TTAAAAGCTCACACGAGTTGGTGGTAA-CTTTTACAGAAAGT-CACATGAGTTGGT-GGTAACCT
64 TCAAAAGCTCACACGAGATGGTGACAACCTTTT-C--AAAGTCCACACAAGTT-GTCAGCAACAT
124102 TTGT
125 TT-T
* * * ** ** * * * * * * * **
124106 -AGAAGCCCATAGGAGTTATTGGTAATCTTTTCAAAGTTC-ACACGAGTTTGCAGC-ACCATAGT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACC-TTTT
* * * ** ** * * * *
124168 C-AAAG-TCTACA-GAGTTGGT-AGTAACTTTTTCAAAAACCTACACGTGCTGGT-GGTAACTTT
65 CAAAAGCTC-ACACGAGATGGTGA-CAACCTTTTCAAAGTCC-ACACAAG-TTGTCAGCAACATT
124228 TT
126 TT
* ** * * * * *
124230 CAAAAGCCCACATGAGTTGGTGGCAACCATTTGAAAGTCC-ACATGAGTTGATGGCAACC-TTTC
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTTC
* * * * * * ** **
124293 AAAAG-TCTACAAGAGTTGGTGGCAGCCTTTTCAAAAGCCCAAAAGCCCATAAAAGTTGGAAGTT
66 AAAAGCTC-ACACGAGATGGTGACAACCTTTTC-AAAGTCC---A---C--ACAAGTTGTCAGCA
124357 AC-TATTT
121 ACAT-TTT
* * * * * * * *
124364 CAATATC-CACACGAGTTGGTGGTAACCTTTTGAAAAGT-CTACAAGAGTTGGTAGTAACCTTTA
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAA-TCCTACATGAGTTGGTAGCAACCTTTT
* * * ** *
124427 CAAAAG-TCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACCTTTT
65 CAAAAGCT-CACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTTT
* * ** * * * * * *
124490 CAAAAGCCCACACGAGTTGGTGATAACTTTTTCAATAT-CTCGCATTAGTTGGTGGTAACCTTTT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCT-ACATGAGTTGGTAGCAACCTTTT
* * * * * * ** * * *
124554 CAAAATCACATAC-ATGTTGGTAGA-AACCTTTTCAAAGGCCTATATGAGTTTGTGA-TAACCTT
65 CAAAAGCTCACACGA-GATGGT-GACAACCTTTTCAAAGTCC-ACACAAG-TTGTCAGCAACATT
124616 TT
126 TT
* * * * * ** * * * *
124618 CAATAGTTCACACAAGTTGGTGGCAGCCTTTTC-AAAGCCCACGCGAGTTGTTGGCAACCTTATA
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTTC
* * * * ** *
124682 AAAAG-TCCACACGAGTTGGTGGCAACCTTTTCAAAAATCCATATGAGTTGGT-AGCAACCTTTT
66 AAAAGCT-CACACGAGATGGTGACAACCTTTTC-AAAGTCCACACAAGTT-GTCAGCAACATTTT
** * ** * * **
124745 CAAAA-CTCTACATGAGTTGGTGGCAA-CTATTTCAAAGTCC-ACACAAGTTGTTGGCAATATTT
1 CAAAAGCTC-ACACAAGTTGGTGGCAACCT-TTTCAAAATCCTACATGAGTTGGTAGCAACCTTT
* * * **
124807 TCAAAAG-TCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCATTT
64 TCAAAAGCT-CACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAA-CATTT
124871 T
127 T
* * * * * *
124872 -AAAAGCTCAAACAAGTTGTTGGCAA-CTTTTACAAAAACCCACACGAGTTGGT-GATAACCTTT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTT-CAAAATCCTACATGAGTTGGTAG-CAACCTTT
* * ** * * ** * * * * * **
124934 TTAAAAGCCCATTCGAGTTAGTGGTAACCTTTTCAAAGTTCACACGAGTTTGT-GGTACCATAAT
64 TCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAG-TTGTCAGCAACATTTT
* * * * * * * *
124998 C-AAAG-TCTACACAAGTTAGTGGTAACGTTTTTAAAAGT--TGACAGGAGTTGATGGCAACCAT
1 CAAAAGCTC-ACACAAGTTGGTGGCAACCTTTTCAAAA-TCCT-ACATGAGTTGGTAGCAACCTT
* * * * * * * ** * * *
125059 TTCAAAAGCCCACAAGA-ATTAGTGGCAACCTTTTTAAAGTTCATATGAGTTGGT-GGTAACCTT
63 TTCAAAAGCTCACACGAGA-TGGTGACAACCTTTTCAAAGTCCACACAAGTT-GTCAGCAACATT
125122 TT
126 TT
* * * * * * *
125124 CAAAAGCCCACACAAATT-GTCGGTAGCCTTTTTAAAAGTCC-ACACGAGTTGAT-GACAACCTT
1 CAAAAGCTCACACAAGTTGGT-GGCAACCTTTTCAAAA-TCCTACATGAGTTGGTAG-CAACCTT
* * * * * * *
125186 TTC-AAAG-TCCACATGA-ATTGGGGGCAATCTTTTCAAAGGCCCACACAAGTTGGT-GGTAACA
63 TTCAAAAGCT-CACACGAGA-TGGTGACAACCTTTTCAAA-GTCCACACAAGTT-GTCAGCAACA
125247 TTTT
124 TTTT
* ** * * * * *
125251 CAAAAG-TCCACACTAGTTGGTGAAAACCTTTTC-AAA-GCTGCACGAGTTGTTGGCAACCTTTT
1 CAAAAGCT-CACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTT
* * * * * * * ** * *
125313 CGAAAGCCCACATGAGTTAGTGGCAACTTTTTCAACAACCCACA-AGAGTTGGT-GGCAACTTTT
65 CAAAAGCTCACACGAGATGGTGACAACCTTTTCAA-AGTCCACACA-AGTT-GTCAGCAACATTT
125376 T
127 T
* * * * * * * * * ** * * **
125377 TAAAAGCCCACACGATTTGGCGACAACTTTTTCAAAGTTC-ACACAAGTTTGTGGC-ACCATAGT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACC-TTTT
* * * ** * * * * *
125440 C-AAAG-TCCACAAGAGTTAGTGGTAACATTTTAAAAAGTCTACATAAGTTGAT-TGCAACCA-T
65 CAAAAGCT-CACACGAGATGGTGACAACCTTTT-CAAAGTCCACACAAGTTG-TCAGCAA-CATT
125501 TT
126 TT
* * * * * *
125503 CAAAAGCCCACACGAA-TTGGTGGCAACCTTTTTAAAGTCC-ATATGACTTGGTGGCAACCTTTT
1 CAAAAGCTCACAC-AAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTT
* * * * * * * ** * *
125566 CAAAAGACT-GCACGTGCTATTG-GA-AGCTTTTTTAAAAGCCCACATGAGTTGAT-GGCAACCT
65 CAAAAG-CTCACACGAG--ATGGTGACAAC-CTTTTCAAAGTCCACACAAGTTG-TCAGCAACAT
125627 TTT
125 TTT
* * * ** * *
125630 C-AAAG-TCCACATAAGTTAGG-GGCAACCTTTTC-AAAGCCCACACAAATTGGGAGCAACCTTT
1 CAAAAGCT-CACACAAGTT-GGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTT
* * * ** * * *
125691 TC-AAAGTTCACATGAGTTTATGGC-A-C----CATAGT---CA-AA---GTC--TAACATTTT
64 TCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTTT
* * * * ** * * *
125739 CAGAAGCTCACACGAGTTGGTGGTAACCTTTTCAAAGTCC-ACACAAGTTGTTGGCAACATTTAT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTT-T
* * * ** * * * * ** * *
125803 -AAAAGCCCAGAAGACTTGGAGAAAACCTTTTCAAAATCTGACATGAG-T-TAATG--GCA-TTT
65 CAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTC-CACACAAGTTGTCA-GCAACATTTT
* * ** * ** * * * * *
125862 CAAAATC-CTGCATGAGTTGGTAGG-AAACTTTTCAAAGGCCCAAATGAGTTGGTGGTATCCTTT
1 CAAAAGCTC-ACACAAGTTGGT-GGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTT
* * * * *** * **
125925 TCAAAAGGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGCCCTTGCGAGTTGTTGGCAATC-TTT
64 TCAAAA-GCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAA-CATTT
125988 T
127 T
* * ** * * * * * * *
125989 CAAAAGCCCATATGAGTTGGTAGCAACCTTTTTAAAA-CCTACACGAGTTTGTGGGAACCTTTTT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTTC
* * * * * * * * * **
126053 TAAAGCCCACACGAGTTGG-CAGCAACCTTTTCAAGGTTCACAAAAGTTTGTGA-CACCATAGT
66 AAAAGCTCACACGAGATGGTGA-CAACCTTTTCAAAGTCCACACAAG-TTGTCAGCAACATTTT
* * * *
126115 C-AAAG-TC-CACATGAGTTGGTGGTAACATTTTCAAAAGTCTGTAC--GAGTTGGTGGCAACCT
1 CAAAAGCTCACACA--AGTTGGTGGCAACCTTTTCAAAA-TC-CTACATGAGTTGGTAGCAACCT
* * * * * * * * ** * *
126175 TTTTAAAAGCCCACCCGAGTTAGTGGCAACCTTTTGAAAGTCCATATGAGTTGGT-GGCAACCTT
62 TTTCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTT-GTCAGCAACATT
126239 TT
126 TT
* * * * * * * * *
126241 CAAAAGCCCACACAAGTTGTTGGTAGCCTTTTTAAAATGCTACAAT-AGTTGATGGTAACCTTTT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTAC-ATGAGTTGGTAGCAACCTTTT
* * * * * * * *** *
126305 C-AAAGCCCAAATGAGTTGAG-GGCAACCTTTTCAAAGCCCGCACGAA-TTGGGGGCAACCTTTT
65 CAAAAGCTCACACGAGATG-GTGACAACCTTTTCAAAGTCCACAC-AAGTTGTCAGCAACATTTT
* * * * * * * * * *
126367 C-AAATCCCACACCAGTTTGTGG-TACTTTTTCAAAGTTCAC-ACAAGTTTGTGGCACCATAGTT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAA-ATC-CTAC-A-----T-G-A--GTTGGT
* * * * * *** *
126429 AAAGTCTAACATTTTCAGAAGC-CTACACAAGTTGGTGGCAACCTTTTCAAAGTCTGTAAAAGTT
54 --AG-C-AACCTTTTCAAAAGCTC-ACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTT
* * **
126493 GGT-GGCACCATAGT
114 -GTCAGCAACATTTT
* * * * * * *
126507 -GAAAG-TCCACACGAGTTGGTGGCAACATTCTCAAAA-ACTCACATGAGTTGATGGCAACCTTT
1 CAAAAGCT-CACACAAGTTGGTGGCAACCTTTTCAAAATCCT-ACATGAGTTGGTAGCAACCTTT
* * * * * ** *
126569 TCAAAGGC-CTACATGAGTTGGT-AGCAGCCTTTTCAAAGTCCACAAAAGTTGTTGGCAACCTTT
64 TCAAAAGCTC-ACACGAGATGGTGA-CAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTT
126632 T
127 T
* ** * * * * *
126633 CAAAAGCCCACATGAGTTGGTGGCAACCTTTTCAAAATTCAACATGAGTTTGTGGCAAAC-TTTC
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTTC
* * * * * * * ***
126697 AAAATCCCACATGAGTTAGT-AGCAACCTTTTCAAAAG-CCTATACGAGTTGGT--GCTATGGTT
66 AAAAGCTCACACGAGATGGTGA-CAACCTTTTC-AAAGTCC-ACACAAGTT-GTCAGC-AACATT
*
126758 TG
126 TT
* * * * * * * * * * * *
126760 CAAATGGC-CGCACGAGTTGGTGGTAACTTTTTC-AAAGCCCAAACGAGTTGTTGGTAACCTTTT
1 CAAA-AGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTT
* * * * * * * * *
126823 CAAAAG-TCGACAAGAGTTGATGGCAACCTTTTCAAAAATCCACACGAGTTGGT-GGTAACCTTT
65 CAAAAGCTC-ACACGAGATGGTGACAACCTTTTC-AAAGTCCACACAAGTT-GTCAGCAACATTT
126886 T
127 T
* * * * * * * *
126887 TAAAA-ATCCACACGAGTTGGTGGTAA-CTATTTCAAAGTCC-ACATGAGTTGATGGCAA-CGTT
1 CAAAAGCT-CACACAAGTTGGTGGCAACCT-TTTCAAAATCCTACATGAGTTGGTAGCAACCTTT
* * * * * * * **
126948 TCAAAAG-TCCACAAGAGTTGATGGCAACTTTTTCAAAAGCCCAAAAGCCCACATGAATTGTTGG
64 TCAAAAGCT-CACACGAGATGGTGACAACCTTTTC-AAAGTCC---A---CACA--AGTTGTCAG
127012 CAACCA-TTT
119 CAA-CATTTT
** * * * * *
127021 CAAACCCT-ACACGAGTTGGTGGCAACCTTTTCAAAAGT-CTACAAGAGTTGGTGGCAACCGTTG
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAA-TCCTACATGAGTTGGTAGCAACCTTTT
* * * * * * * ** *
127084 CAAAAGCTTACACGAGTTAGTGATAACTTTTTGAAAGTCCACACTAGTTGTTGGCAACCTTTT
65 CAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTTT
* * * *
127147 CAAAAG-TC-CACATGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGTAACCTTT
1 CAAAAGCTCACACA--AGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTT
* * * * * *
127210 TCAAAATCTCACACGA-ATTGGT-AGCAACCTTTTCGAAAGCCCACATAAGTTGGTGA-TAACCT
64 TCAAAAGCTCACACGAGA-TGGTGA-CAACCTTTTC-AAAGTCCACACAAGTT-GTCAGCAACAT
127272 TTT
125 TTT
* * ** * * * *
127275 TAAAA-ATCA-ATTTGAGTTGGTGGCTAA-CTTTTTAAAA-CCTCGCTTGAGTTGGTGGCAACCT
1 CAAAAGCTCACA--CAAGTTGGTGGC-AACCTTTTCAAAATCCT-ACATGAGTTGGTAGCAACCT
* * * * * *
127336 TTTCAAAA-TTTACACGAG-T-TTG-------TATCATAGT---CA-AA---GTC--TAACATTT
62 TTTCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTT
127382 T
127 T
* * * * * ** * ** **
127383 TAGAAGTTCACAC-AGTTGGTGGCAACCTTTTCAAAGT-CTATAAAAGTTTGT-GGTACCATAGT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACC-TTTT
* * * * * ** * *
127445 C-AAAG-TCCACACAAGTTGGTGGCAACATTTTCAAAAGCCCACATGAGTTG-AAGGCAACCTTT
65 CAAAAGCT-CACACGAGATGGTGACAACCTTTTC-AAAGTCCACACAAGTTGTCA-GCAACATTT
127507 T
127 T
* * * ** * * * *
127508 CAAAAGCCCACACAAGTTGATGGCAACATTTTCAATGTGC-AAACGAGTTGGT-GTCAGCCATTT
1 CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAG-CAACC-TTT
** * * * * * * * * * *
127571 TTTAAAGCCCACACAAGTTGATGGCAACCTTTTCAATGTGCACACGAGTTGGT-GGCAACCTTTT
64 TCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTT-GTCAGCAACATTTT
* * * * *
127635 CAAAAGC-CGAAAGGCCCATTAGAGTTGGTGGTAACCTTTTTAAAAGT-TTACGA-GAGTTGGTG
1 CAAAAGCTC---A----CA-CA-AGTTGGTGGCAACCTTTTCAAAA-TCCTAC-ATGAGTTGGTA
* * * * * ** **
127697 GTAACCTTTTCAAAAGCCCACACGAGTTAGTGATAACCTTTTCAAAGTTAACACAAGTTGTTGGC
55 GCAACCTTTTCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGC
* *
127762 AGCCTTTT
120 AACATTTT
* ** * * *
127770 TAAAAG-TGCACATGAGTTGGTGGCAACCTTTTCAAAAGT-CTATGA-GAGCTGGTCGCAACCTT
1 CAAAAGCT-CACACAAGTTGGTGGCAACCTTTTCAAAA-TCCTA-CATGAGTTGGTAGCAACCTT
* * * * * ** *
127832 TTCAAAAGCCCACACGAGTTAGTGACAACCTTTTCAAAATCCACATAAGTTGTTGGCAACCTTTT
63 TTCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTTT
* * * * *
127897 CAAAAGCTCTTC-CAAGTTGGTGACAATCTTTTCAAAATTCC-ACATGAGTTGATAGCAAACTTT
1 CAAAAGCTC-ACACAAGTTGGTGGCAACCTTTTCAAAA-TCCTACATGAGTTGGTAGCAACCTTT
* * * * * ** *
127960 TCAAAAGCTCATACGAGTTGGTGACATCCTTTTGAAAGTCCACACCAGTTGTTGGCAATATTTT
64 TCAAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTTT
* * *
128024 CAAAAG-TCCACACGAGTTGGTGGTAACCTTTTTAAAA
1 CAAAAGCT-CACACAAGTTGGTGGCAACCTTTTCAAAA
128061 GCTCACACGA
Statistics
Matches: 3123, Mismatches: 776, Indels: 621
0.69 0.17 0.14
Matches are distributed among these distances:
105 8 0.00
106 17 0.01
107 21 0.01
108 14 0.00
109 15 0.00
110 41 0.01
111 19 0.01
112 1 0.00
113 3 0.00
114 3 0.00
115 5 0.00
116 3 0.00
117 7 0.00
118 6 0.00
119 2 0.00
120 1 0.00
121 2 0.00
122 2 0.00
123 44 0.01
124 63 0.02
125 216 0.07
126 921 0.29
127 1106 0.35
128 199 0.06
129 21 0.01
130 4 0.00
131 2 0.00
132 5 0.00
133 60 0.02
134 76 0.02
135 136 0.04
136 16 0.01
137 3 0.00
138 1 0.00
139 13 0.00
140 57 0.02
141 10 0.00
ACGTcount: A:0.31, C:0.21, G:0.19, T:0.29
Consensus pattern (127 bp):
CAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACCTTTTC
AAAAGCTCACACGAGATGGTGACAACCTTTTCAAAGTCCACACAAGTTGTCAGCAACATTTT
Found at i:124548 original size:127 final size:125
Alignment explanation
Indices: 124370--128108 Score: 741
Period size: 127 Copynumber: 29.6 Consensus size: 125
124360 ATTTCAATAT
* ** * * *
124370 CCACACGAGTTGGTGGTAACCTTTTGAAAAGTCTACA-AGAGTTGGTAGTAACCTTTACAAAAGT
1 CCACACGAGTTGGTGGCAA-CTTTTTCAAA-TCCACACA-AGTTGGTGGCAACCTTTACAAAAGT
* *
124434 CCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACCTTTTCAAAAGC
63 CCACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
** * ** * *
124497 CCACACGAGTTGGTGATAACTTTTTCAATATCTCGCATTAGTTGGTGGTAACCTTTTCAAAA-TC
1 CCACACGAGTTGGTGGCAACTTTTTCAA-ATC-CACACAAGTTGGTGGCAACCTTTACAAAAGTC
* * * * ** *
124561 ACATAC-ATGTTGGTAGA-AACCTTTTCAAAGGCCTATATGAGTT-TGTGATAACCTTTTCAATA
64 -CACACGA-GTTGGTA-ACAACCTTTTCAAAGTCC-ACATAAGTTGT-TGGCAACCTTTTCAAAA
*
124623 GT
124 GC
* * * * * * * *
124625 TCACACAAGTTGGTGGCAGCCTTTTCAAAGCCCACGCGAGTTGTTGGCAACCTTATA-AAAAGTC
1 CCACACGAGTTGGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTT-TACAAAAGTC
** * * * * *
124689 CACACGAGTTGGTGGCAACCTTTTCAAAAATCCATATGAGTTGGTAGCAACCTTTTCAAAA-C
64 CACACGAGTTGGTAACAACCTTTTC-AAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * ** *
124751 TCTACATGAGTTGGTGGCAACTATTTCAAAGTCCACACAAGTTGTTGGCAATATTTTCAAAAGTC
1 -CCACACGAGTTGGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAGTC
**
124816 CACACGAGTTGGTGGCAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCATTTT-AAAAGC
64 CACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACC-TTTTCAAAAGC
* * * * * * * ** ** *
124878 TCAAACAAGTTGTTGGCAACTTTTACAAAAACCCACACGAGTTGGTGATAACCTTTTTAAAAGCC
1 CCACACGAGTTGGTGGCAACTTTTTC--AAATCCACACAAGTTGGTGGCAACCTTTACAAAAGTC
** * *** * ** * ** *
124943 CATTCGAGTTAGTGGTAACCTTTTCAAAGTTCACACGAGTT-TGTGG-TACCATAATC-AAAGT
64 CACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGT-TGGCAACC-TTTTCAAAAGC
* * * * * ** ** * *
125004 CTACACAAGTTAGTGGTAACGTTTTTAAAAGTTGACAGGAGTTGATGGCAACCATTT-CAAAAGC
1 CCACACGAGTTGGTGGCAAC-TTTTTCAAA-TCCACACAAGTTGGTGGCAACC-TTTACAAAAGT
* * * ** * * * * * *
125068 CCACAAGAATTAGTGGCAACCTTTTTAAAGTTCATATGAGTTGGTGGTAACCTTTTCAAAAGC
63 CCACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * * * * * *
125131 CCACACAAATT-GTCGGTAGCCTTTTTAAAAGTCCACACGAGTTGATGACAACCTTTTC-AAAGT
1 CCACACGAGTTGGT-GGCA-ACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAGT
* * *** * * * * * * *
125194 CCACATGAATTGGGGGCAATCTTTTCAAAGGCCCACACAAGTTGGTGGTAACATTTTCAAAAGT
63 CCACACGAGTTGGTAACAACCTTTTCAAA-GTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* ** * * ** * * * * *
125258 CCACACTAGTTGGTGAAAACCTTTTCAAAGCTGCACGAGTTGTTGGCAACCTTTTCGAAAGCCCA
1 CCACACGAGTTGGTGGCAACTTTTTCAAATCCACACAAGTTGGTGGCAACCTTTACAAAAGTCCA
* * ** * ** * * *
125323 CATGAGTTAGTGGCAACTTTTTCAACAACCCACA-AGAGTTGGTGGCAACTTTTTTAAAAGC
66 CACGAGTTGGTAACAACCTTTTCAA-AGTCCACATA-AGTTGTTGGCAACCTTTTCAAAAGC
* * * * * *
125384 CCACACGATTTGGCGACAACTTTTTCAAAGTTCACACAAGTTTGTGGC-ACC-ATAGTC-AAAGT
1 CCACACGAGTTGGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTTTA--CAAAAGT
* * *** * * * *
125446 CCACAAGAGTTAGTGGTAACATTTTAAAAAGTCTACATAAGTTGATT-GCAACCATTTCAAAAGC
63 CCACACGAGTTGGTAACAACCTTTT-CAAAGTCCACATAAGTTG-TTGGCAACCTTTTCAAAAGC
* * ** * * *
125510 CCACACGAATTGGTGGCAACCTTTTT-AAAGTCCATATGACTTGGTGGCAACCTTTTCAAAAGAC
1 CCACACGAGTTGGTGGCAA-CTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAGTC
** * ** * * * *
125574 TGCACGTGCTATTGG-AAGC--TTTTTTAAAAGCCCACATGAGTTGATGGCAACCTTTTC-AAAG
64 CACACGAG---TTGGTAA-CAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAG
*
125635 T
125 C
** * * * *
125636 CCACATAAGTTAGG-GGCAACCTTTTCAAAGCCCACACAAATTGG-GAGCAACCTTTTC-AAAGT
1 CCACACGAGTT-GGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTG-GCAACCTTTACAAAAGT
* * ** ** * * * *
125698 TCACATGAGTTTATGGC-A-C----CATAGT---CA-AAG-T-CT---AACATTTTCAGAAGC
63 CCACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * * * *
125746 TCACACGAGTTGGTGGTAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACATTTATAAAAGCCC
1 CCACACGAGTTGGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAGTCC
* * * * * * * ** *
125811 AGAAGACTTGG-AGAAAACCTTTTCAAAATCTGACATGAGTTAATGGC-A---TTTCAAAATC
65 ACACGAGTTGGTA-ACAACCTTTTCAAAGTC-CACATAAGTTGTTGGCAACCTTTTCAAAAGC
** * * * * * * *
125869 CTGCATGAGTTGGTAGGAAAC-TTTTCAAAGGCC-CAAATGAGTTGGTGGTATCCTTTTCAAAAG
1 CCACACGAGTTGGT-GGCAACTTTTTCAAA-TCCACACA--AGTTGGTGGCAACCTTTACAAAAG
* * ** * * *
125932 GCCACCCGAGTTGGTGGCAACCTTTTCAAAG-CC-CTTGCGAGTTGTTGGCAATCTTTTCAAAAG
62 TCCACACGAGTTGGTAACAACCTTTTCAAAGTCCACAT--AAGTTGTTGGCAACCTTTTCAAAAG
125995 C
125 C
* * * * * * * *** *
125996 CCATATGAGTTGGTAGCAACCTTTTT-AAAACCTACACGAGTTTGTGGGAACCTTTTTTAAAGCC
1 CCACACGAGTTGGTGGCAA-CTTTTTCAAATCC-ACACAAGTTGGTGGCAACCTTTACAAAAGTC
* * * * * * ** *
126060 CACACGAGTTGGCAGCAACCTTTTCAAGGTTCACAAAAGTT-TGTGAC-ACCATAGTC-AAAGT
64 CACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGT-TGGCAACC-TTTTCAAAAGC
* * * *** * ** *
126121 CCACATGAGTTGGTGGTAACATTTTCAAAAGTCTGTACGAGTTGGTGGCAACCTTTTTAAAAGCC
1 CCACACGAGTTGGTGGCAACTTTTTC-AAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAGTC
* * ** * * * *
126186 CACCCGAGTTAGTGGCAACCTTTTGAAAGTCCATATGAGTTGGTGGCAACCTTTTCAAAAGC
64 CACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * * * * * * *
126248 CCACACAAGTTGTTGGTAGCCTTTTTAAAATGCTACA-ATAGTTGATGGTAACCTTTTC-AAAGC
1 CCACACGAGTTGGTGGCA-ACTTTTTCAAAT-CCACACA-AGTTGGTGGCAACCTTTACAAAAGT
* * ** * * * ** *
126311 CCAAATGAGTTGAG-GGCAACCTTTTCAAAGCCCGCACGAA-TTGGGGGCAACCTTTTC-AAATC
63 CCACACGAGTTG-GTAACAACCTTTTCAAAGTCCACA-TAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * * * *
126373 CCACACCAGTTTGTGG-TACTTTTTCAAAGTTCACACAAGTTTGTGGC-A-C----C-ATAGT-T
1 CCACACGAGTTGGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAGTCC
* * * *
126429 A-A--AG-T-CTAAC-A--TTTTCAGAAG-CCTACACAAGTTGGTGGCAACCTTTTC-AAAGT
65 ACACGAGTTGGTAACAACCTTTTCA-AAGTCC-ACATAAGTTGTTGGCAACCTTTTCAAAAGC
*** ** * * ** * * * *
126482 CTGTAAAAGTTGGTGGCACCATAGTGAAAGTCCACACGAGTTGGTGGCAACATTCT-CAAAA-AC
1 CCACACGAGTTGGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTT-TACAAAAGTC
* * ** * * * * * *
126545 TCACATGAGTTGATGGCAACCTTTTCAAAGGCCTACATGAGTTGGTAGCAGCCTTTTC-AAAGT
64 -CACACGAGTTGGTAACAACCTTTTCAAAGTCC-ACATAAGTTGTTGGCAACCTTTTCAAAAGC
** * * * * *
126608 CCACAAAAGTTGTTGGCAACCTTTTCAAAAGCC-CACATGAGTTGGTGGCAACCTTTTCAAAATT
1 CCACACGAGTTGGTGGCAACTTTTTC-AAATCCACACA--AGTTGGTGGCAACCTTTACAAAAGT
* * * ** * * * *
126672 CAACATGAGTTTGTGGCAAAC-TTTCAAAATCCCACATGAGTTAG-TAGCAACCTTTTCAAAAGC
63 CCACACGAGTTGGTAACAACCTTTTCAAAGT-CCACATAAGTT-GTTGGCAACCTTTTCAAAAGC
* * * * * * * * *
126735 CTATACGAGTTGGT-GCTA-TGGTTTGCAAATGGCCGCACGAGTTGGTGGTAACTTTTTC-AAAG
1 CCACACGAGTTGGTGGCAACT--TTTTCAAAT--CCACACAAGTTGGTGGCAACCTTTACAAAAG
* * * *** * * *
126797 CCCAAACGAGTTGTTGGTAACCTTTTCAAAAGTCGACA-AGAGTTGATGGCAACCTTTTCAAAAA
62 TCCACACGAGTTGGTAACAACCTTTTC-AAAGTCCACATA-AGTTGTTGGCAACCTTTTCAAAAG
*
126861 T
125 C
* * * * *
126862 CCACACGAGTTGGTGGTAACCTTTTTAAAAATCCACACGAGTTGGTGGTAA-CTATTTC-AAAGT
1 CCACACGAGTTGGTGGCAA-CTTTTT-CAAATCCACACAAGTTGGTGGCAACCT-TTACAAAAGT
* * ** * * *
126925 CCACATGAGTTGATGGCAA-CGTTTCAAAAGTCCACA-AGAGTTGATGGCAACTTTTTCAAAAGC
63 CCACACGAGTTGGTAACAACCTTTTC-AAAGTCCACATA-AGTTGTTGGCAACCTTTTCAAAAGC
* * ** * * *
126988 CCAAAAGCCCACATGAATTGTTGGCAACCATTTCAAACCCTACACGAGTTGGTGGCAACCTTTTC
1 CC---A---CAC--GAGTTGGTGGCAACTTTTTCAAATCC-ACACAAGTTGGTGGCAACCTTTAC
* * ** * * * ** **
127053 AAAAGTCTACAAGAGTTGGTGGCAACCGTTGCAAAAG-CTTACACGAGTTAG-TGATAA-CTTTT
57 AAAAGTCCACACGAGTTGGTAACAACCTTTTC-AAAGTC-CACATAAGTT-GTTGGCAACCTTTT
** *
127115 TGAAAGT
119 CAAAAGC
* * * ** *
127122 CCACACTAGTTGTTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAA-TC
1 CCACACGAGTTGGTGGCAACTTTTTC-AAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAGT-
*** * * * * *
127186 CCACACGAGTTGGTGGTAACCTTTTCAAAATCTCACACGAA-TTGGTAGCAACCTTTTCGAAAGC
63 CCACACGAGTTGGTAACAACCTTTTCAAAGTC-CACA-TAAGTTGTTGGCAACCTTTTCAAAAGC
** ** * * **** **
127250 CCACATAAGTTGGTGATAACCTTTTTAAAAATCAATTTGAGTTGGTGGCTAA-CTTTTTAAAA--
1 CCACACGAGTTGGTGGCAA-CTTTTT-CAAATCCACACAAGTTGGTGGC-AACCTTTACAAAAGT
* * ** * ** **
127312 CCTCGCTTGAGTTGGTGGCAACCTTTTCAAAATTTACACGAGTTTGTATCATAGTCAAAGTCTAA
63 CCACAC--GAGTTGGTAACAACCTTTTCAAAGTCCACATAAG-TTG--T--T-G-----G-C-AA
* * * *
127377 CATTTTTAGAAGT
113 CCTTTTCAAAAGC
* * * * * * * *
127390 TCACAC-AGTTGGTGGCAACCTTTTCAAAGTCTATAAAAGTTTGTGG-TACC-ATAGTC-AAAGT
1 CCACACGAGTTGGTGGCAACTTTTTCAAA-TCCACACAAGTTGGTGGCAACCTTTA--CAAAAGT
* ** * * * **
127451 CCACACAAGTTGGTGGCAACATTTTCAAAAGCCCACATGAGTTGAAGGCAACCTTTTCAAAAGC
63 CCACACGAGTTGGTAACAACCTTTTC-AAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * * * * * * *** *
127515 CCACACAAGTTGATGGCAACATTTTCAATGTGCAAACGAGTTGGTGTCAGCCATTTTTTAAAGCC
1 CCACACGAGTTGGTGGCAACTTTTTCAA-ATCCACACAAGTTGGTGGCAACC-TTTACAAAAGTC
* * ** * * ** *
127580 CACACAAGTTGATGGCAACCTTTTCAATGTGCACACGAGTTGGTGGCAACCTTTTCAAAAGC
64 CACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * ** * *
127642 CGAAAGGCCCATTAGAGTTGGTGGTAACCTTTTTAAAAGTTTACGA-GAGTTGGTGGTAACCTTT
1 C------CACA--CGAGTTGGTGGCAA-CTTTTTCAAA-TCCAC-ACAAGTTGGTGGCAACCTTT
* * * * * ** * * *
127706 TCAAAAGCCCACACGAGTTAGTGATAACCTTTTCAAAGTTAACACAAGTTGTTGGCAGCCTTTTT
55 ACAAAAGTCCACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTC
*
127771 AAAAGT
120 AAAAGC
* * * * * * * * * *
127777 GCACATGAGTTGGTGGCAACCTTTTCAAAAGTCTATGA-GAGCTGGTCGCAACCTTTTCAAAAGC
1 CCACACGAGTTGGTGGCAACTTTTTC-AAA-TCCA-CACAAGTTGGTGGCAACCTTTACAAAAGT
* * *
127841 CCACACGAGTTAGTGACAACCTTTTCAAAATCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
63 CCACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
** * * ** * * * *
127904 TCTTC-CAAGTTGGTGACAA-TCTTTTCAAAATTCCACATGAGTTGATAGCAAACTTTTCAAAAG
1 -CCACACGAGTTGGTGGCAACT-TTTTC-AAA-TCCACACAAGTTGGTGGCAACCTTTACAAAAG
* * * * ** ** *
127967 -CTCATACGAGTTGGTGACATCCTTTTGAAAGTCCACACCAGTTGTTGGCAATATTTTCAAAAGT
62 TC-CACACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
* * * * * * **
128031 CCACACGAGTTGGTGGTAACCTTTTTAAAAGCTCACACGAGTTGCTGGCAACTTTTACAAAAACC
1 CCACACGAGTTGGTGGCAA-CTTTTTCAAATC-CACACAAGTTGGTGGCAACCTTTACAAAAGTC
*
128096 CACACGAATTGGT
64 CACACGAGTTGGT
128109 GGTACCCTTT
Statistics
Matches: 2688, Mismatches: 694, Indels: 460
0.70 0.18 0.12
Matches are distributed among these distances:
108 10 0.00
109 44 0.02
110 68 0.03
111 14 0.01
112 3 0.00
113 4 0.00
114 2 0.00
115 3 0.00
116 2 0.00
117 10 0.00
118 4 0.00
119 1 0.00
121 7 0.00
122 10 0.00
123 61 0.02
124 54 0.02
125 103 0.04
126 779 0.29
127 997 0.37
128 204 0.08
129 23 0.01
130 4 0.00
131 1 0.00
132 10 0.00
133 27 0.01
134 44 0.02
135 90 0.03
136 24 0.01
137 29 0.01
138 27 0.01
139 15 0.01
140 14 0.01
ACGTcount: A:0.31, C:0.21, G:0.19, T:0.29
Consensus pattern (125 bp):
CCACACGAGTTGGTGGCAACTTTTTCAAATCCACACAAGTTGGTGGCAACCTTTACAAAAGTCCA
CACGAGTTGGTAACAACCTTTTCAAAGTCCACATAAGTTGTTGGCAACCTTTTCAAAAGC
Found at i:126231 original size:63 final size:63
Alignment explanation
Indices: 125735--128236 Score: 772
Period size: 63 Copynumber: 39.4 Consensus size: 63
125725 AAGTCTAACA
* * * * * * *
125735 TTTTCAGAAGCTCACACGAGTTGGTGGTAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * ** * * * * **
125798 TTTAT-AAAAGCCCAGAAGACTTGGAGAAAACCTTTTCAAAATCTGACATGAGTTAATGGC-A--
1 TTT-TCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-CATACGAGTTGGTGGCAACC
* ** * * * * * * *
125859 -TTTCAAAATCCTGCATGAGTTGGTAGG-AAACTTTTCAAAGGCCCAAATGAGTTGGTGGTATCC
1 TTTTCAAAAGCCCACACGAGTTGGT-GGCAACCTTTTCAAA-GTCCATACGAGTTGGTGGCAACC
* * * * * * *
125922 TTTTCAAAAGGCCACCCGAGTTGGTGGCAACCTTTTCAAAGCCCTTGCGAGTTGTTGGCAATC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * * * * *
125985 TTTTCAAAAGCCCATATGAGTTGGTAGCAACCTTTTTAAA-ACCTACACGAGTTTGTGGGAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCC-ATACGAGTTGGTGGCAACC
** ** * * * ** * *
126048 TTTTTTAAAGCCCACACGAGTTGGCAGCAACCTTTTCAAGGTTCACAAAAGTTTGTGAC-ACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
** * * * * **
126110 ATAGTC-AAAGTCCACATGAGTTGGTGGTAACATTTTCAAAAGTCTGTACGAGTTGGTGGCAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCATACGAGTTGGTGGCAACC
* * * * *
126174 TTTTTAAAAGCCCACCCGAGTTAGTGGCAACCTTTTGAAAGTCCATATGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * * * * * * *
126237 TTTTCAAAAGCCCACACAAGTTGTTGGTAGCCTTTTTAAAATGC-TACAATAGTTGATGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATAC--GAGTTGGTGGCAACC
* * * ** * *
126301 TTTTC-AAAGCCCAAATGAGTTGAG-GGCAACCTTTTCAAAGCCCGCACGAATTGGGGGCAACC
1 TTTTCAAAAGCCCACACGAGTTG-GTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * * * * * *
126363 TTTTC-AAATCCCACACCAGTTTGTGG-TACTTTTTCAAAGTTCACACAAGTTTGTGGC-ACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * * * *** * * * *
126423 ATAGTT--AAAGTCTA-AC-A-TT-TTCAG-AAGCC--TACACAAGTTGGTGGCAACCTT--T-T
1 -T-TTTCAAAAGCCCACACGAGTTGGT-GGCAA-CCTTTTCA-AAGTCCAT-ACGA-GTTGGTGG
**
126476 CAAAG
59 CAACC
* ** * * *
126481 TCTGT-AAAAG----------TTGGTGGC-ACCATAGTGAAAGTCCACACGAGTTGGTGGCAACA
1 T-TTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * * * * *
126534 TTCTCAAAAACTCACATGAGTTGATGGCAACCTTTTCAAAGGCC-TACATGAGTTGGTAGCAGCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATAC--GAGTTGGTGGCAACC
* ** * * * *
126598 TTTTC-AAAGTCCACAAAAGTTGTTGGCAACCTTTTCAAAAGCCCACATGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCATACGAGTTGGTGGCAACC
** * * * * * * * * *
126661 TTTTCAAAATTCAACATGAGTTTGTGGCAAAC-TTTCAAAATCCCACATGAGTTAGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CCATACGAGTTGGTGGCAACC
* * *** * * ** * *
126724 TTTTCAAAAGCCTATACGAGTTGGT-GCTATGGTTTGCAAATGGCCGCACGAGTTGGTGGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGC-AACCTTTTCAAA-GTCCATACGAGTTGGTGGCAACC
* * * * * * *
126788 TTTTC-AAAGCCCAAACGAGTTGTTGGTAACCTTTTCAAAAGTCGACAAGAGTTGATGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCATACGAGTTGGTGGCAACC
** * * * * *
126851 TTTTCAAAAATCCACACGAGTTGGTGGTAACCTTTTTAAAAATCCACACGAGTTGGTGGTAA-C
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * * * * *
126914 TATTTC-AAAGTCCACATGAGTTGATGGCAA-CGTTTCAAAAGTCCACAAGAGTTGATGGCAACT
1 T-TTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCATACGAGTTGGTGGCAACC
* * * * *
126977 TTTTCAAAAGCCCAAAAGCCCACATGAATTGTTGGCAACCATTTCAAA-CCCTACACGAGTTGGT
1 TTTTCAAAAGCCC---A---CAC--GAGTTGGTGGCAACCTTTTCAAAGTCC-ATACGAGTTGGT
127041 GGCAACC
57 GGCAACC
* * * * * * * * **
127048 TTTTCAAAAGTCTACAAGAGTTGGTGGCAACCGTTGCAAAAG-CTTACACGAGTTAGTGATAA-C
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-CATACGAGTTGGTGGCAACC
** * * * * *
127111 TTTTTGAAAGTCCACACTAGTTGTTGGCAACCTTTTCAAAAGTCCACATGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCATACGAGTTGGTGGCAACC
* * * * * *
127175 TTTTCAAAATCCCACACGAGTTGGTGGTAACCTTTTCAAAATCTCACACGAATTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-CATACGAGTTGGTGGCAACC
* ** ** * * * **
127239 TTTTCGAAAGCCCACATAAGTTGGTGATAACCTTTTTAAAAATCAATTTGAGTTGGTGGCTAA-C
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCCATACGAGTTGGTGGC-AACC
* * ** * ** * * **
127303 TTTTTAAAA-CCTCGCTTGAGTTGGTGGCAACCTTTTCAAAATTTACACGAGTTTGTATCATAGT
1 TTTTCAAAAGCC-CACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCA-A--
*
127367 CA
62 CC
*** **** * * ** *
127369 AAGTCTAACATTTTTAGAAGTTCACACAGTTGGTGGCAACCTTTTCAAAGTCTATAAAAGTTTGT
1 TTTTC-AA-A-----AG-CCCACAC-GAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGT
*
127434 GG-TACC
57 GGCAACC
** * * * * * * **
127440 ATAGTC-AAAGTCCACACAAGTTGGTGGCAACATTTTCAAAAGCCCACATGAGTTGAAGGCAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCATACGAGTTGGTGGCAACC
* * * * * * * *
127504 TTTTCAAAAGCCCACACAAGTTGATGGCAACATTTTCAATGTGCAAACGAGTTGGTGTCAGCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
** * * * * *
127567 ATTTTTTAAAGCCCACACAAGTTGATGGCAACCTTTTCAATGTGCACACGAGTTGGTGGCAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * *
127631 TTTTCAAAAGCCGAAAGGCCCATTAGAGTTGGTGGTAACCTTTTTAAAAGT--TTACGAGAGTTG
1 TTTTCAAAAGCC------CACA--CGAGTTGGTGGCAACC-TTTTCAAAGTCCATAC--GAGTTG
*
127694 GTGGTAACC
55 GTGGCAACC
* ** ** * * * *
127703 TTTTCAAAAGCCCACACGAGTTAGTGATAACCTTTTCAAAGTTAACACAAGTTGTTGGCAGCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* ** * * * *
127766 TTTTTAAAAGTGCACATGAGTTGGTGGCAACCTTTTCAAAAGTCTATGA-GAGCTGGTCGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCAT-ACGAGTTGGTGGCAACC
* * * * ** *
127830 TTTTCAAAAGCCCACACGAGTTAGTGACAACCTTTTCAAAATCCACATAAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
** * * * * * * * * *
127893 TTTTCAAAAGCTCTTC-CAAGTTGGTGACAATCTTTTCAAAATTCCACATGAGTTGATAGCAAAC
1 TTTTCAAAAGC-CCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCATACGAGTTGGTGGCAACC
* * * * * * * * **
127957 TTTTCAAAAGCTCATACGAGTTGGTGACATCCTTTTGAAAGTCCACACCAGTTGTTGGCAATA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * * * *
128020 TTTTCAAAAGTCCACACGAGTTGGTGGTAACCTTTTTAAAAG-CTCACACGAGTTGCTGGCAA-C
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTC-CATACGAGTTGGTGGCAACC
* * * * * ** * * *
128083 TTTTACAAAAACCCACACGAATTGGTGGTACCCTTTTTAAAAACCCACAGGAGTTGGTGGTAACC
1 TTTT-CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCCATACGAGTTGGTGGCAACC
** * * ** ** * * * *
128148 TTTTC-AAAGTTCACACGGGTTTGTGGC-ACCATAGTCAAAGTGTACATGAGTTGGTAGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCCATACGAGTTGGTGGCAACC
* * *
128210 TTTTCAAAAGCCTATACGTGTTGGTGG
1 TTTTCAAAAGCCCACACGAGTTGGTGG
128237 TAGCTGTCGT
Statistics
Matches: 1792, Mismatches: 517, Indels: 260
0.70 0.20 0.10
Matches are distributed among these distances:
50 4 0.00
51 6 0.00
52 8 0.00
53 9 0.01
57 7 0.00
58 15 0.01
59 6 0.00
60 44 0.02
61 34 0.02
62 144 0.08
63 725 0.40
64 609 0.34
65 28 0.02
66 5 0.00
67 2 0.00
68 2 0.00
69 6 0.00
70 5 0.00
71 54 0.03
72 43 0.02
73 2 0.00
74 1 0.00
75 33 0.02
ACGTcount: A:0.30, C:0.21, G:0.20, T:0.29
Consensus pattern (63 bp):
TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCATACGAGTTGGTGGCAACC
Found at i:127013 original size:40 final size:40
Alignment explanation
Indices: 126949--127024 Score: 98
Period size: 40 Copynumber: 1.9 Consensus size: 40
126939 GGCAACGTTT
* * **
126949 CAAAAGTCCACAAGAGTTGATGGCAACTTTTTCAAAAGCC
1 CAAAAGCCCACAAGAATTGATGGCAACCATTTCAAAAGCC
* *
126989 CAAAAGCCCACATGAATTGTTGGCAACCATTTCAAA
1 CAAAAGCCCACAAGAATTGATGGCAACCATTTCAAA
127025 CCCTACACGA
Statistics
Matches: 30, Mismatches: 6, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
40 30 1.00
ACGTcount: A:0.38, C:0.24, G:0.16, T:0.22
Consensus pattern (40 bp):
CAAAAGCCCACAAGAATTGATGGCAACCATTTCAAAAGCC
Found at i:127078 original size:229 final size:230
Alignment explanation
Indices: 126789--127215 Score: 569
Period size: 229 Copynumber: 1.9 Consensus size: 230
126779 GTGGTAACTT
* * *
126789 TTTCAAAGCCCAAACGAGTTGTTGGTAACCTTTTCAAAAGTCGACAAGAGTTGATGGCAACCTTT
1 TTTCAAAGCCCAAACGAGTTGGTGGCAACCTTTTCAAAAGTCGACAAGAGTTGATGGCAACCGTT
* * * * *
126854 TCAAAA-ATCCACACGAGTTGGTGGTAACCTTTTTAAAAATCCACACGAGTTGGTGGTAA-CTAT
66 GCAAAAGCT-CACACGAGTTAGTGATAA-CTTTTTAAAAATCCACACGAGTTGGTGGCAACCT-T
*
126917 TTC-AAAGTCCACATGAGTTGATGGCAA-CGTTTCAAAAGT-CCACAAGAGTTGATGGCAACTTT
128 TTCAAAAGTCCACATGAGTTGATGGCAACCGTTTCAAAA-TCCCACAAGAGTTGATGGCAACCTT
126979 TTCAAAAGCCCAAAAGCCCACATGAATTGTTGGCAACCA
192 TTCAAAAGCCCAAAAGCCCACATGAATTGTTGGCAACCA
* * *
127018 TTTCAAA-CCCTACACGAGTTGGTGGCAACCTTTTCAAAAGTCTACAAGAGTTGGTGGCAACCGT
1 TTTCAAAGCCC-AAACGAGTTGGTGGCAACCTTTTCAAAAGTCGACAAGAGTTGATGGCAACCGT
* * * * *
127082 TGCAAAAGCTTACACGAGTTAGTGATAACTTTTTGAAAGTCCACACTAGTTGTTGGCAACCTTTT
65 TGCAAAAGCTCACACGAGTTAGTGATAACTTTTTAAAAATCCACACGAGTTGGTGGCAACCTTTT
* * * * *
127147 CAAAAGTCCACATGAGTTGGTGGCAACCTTTTCAAAATCCCACACGAGTTGGTGGTAACCTTTTC
130 CAAAAGTCCACATGAGTTGATGGCAACCGTTTCAAAATCCCACAAGAGTTGATGGCAACCTTTTC
127212 AAAA
195 AAAA
127216 TCTCACACGA
Statistics
Matches: 170, Mismatches: 22, Indels: 11
0.84 0.11 0.05
Matches are distributed among these distances:
228 33 0.19
229 101 0.59
230 36 0.21
ACGTcount: A:0.32, C:0.21, G:0.19, T:0.28
Consensus pattern (230 bp):
TTTCAAAGCCCAAACGAGTTGGTGGCAACCTTTTCAAAAGTCGACAAGAGTTGATGGCAACCGTT
GCAAAAGCTCACACGAGTTAGTGATAACTTTTTAAAAATCCACACGAGTTGGTGGCAACCTTTTC
AAAAGTCCACATGAGTTGATGGCAACCGTTTCAAAATCCCACAAGAGTTGATGGCAACCTTTTCA
AAAGCCCAAAAGCCCACATGAATTGTTGGCAACCA
Found at i:128109 original size:127 final size:126
Alignment explanation
Indices: 127446--128221 Score: 496
Period size: 127 Copynumber: 6.0 Consensus size: 126
127436 TACCATAGTC
* * * * * * ** **
127446 AAAGTCCACACAAGTTGGTGGCAACATTTTCAAAAGCCCACATGAGTTGAAGGCAACCTTTTCAA
1 AAAGCCCACACGAGTTAGTGACAACCTTTTC-AAAGTCCACACAAGTTGTTGGCAACCTTTTCAA
* * * * * * * * * **
127511 AAGCCCACACAAGTTGATGGCAACATTTTC-AATGTGCAAACGAGTTGGTGTCAGCCATTTTTT
65 AAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGTTCACA-GAGTTGGTGGCAACC-TTTTCA
* * * * * *
127574 AAAGCCCACACAAGTT-GATGGCAACCTTTTCAATGTGCACACGAGTTGGTGGCAACCTTTTCAA
1 AAAGCCCACACGAGTTAG-TGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACCTTTTCAA
* * * * *
127638 AAG-CCGAAAGGCCCATTAGAGTTGGTGGTAACCTTTTTAAAAGTTTACGAGAGTTGGTGGTAAC
65 AAGTCC---A----CA--CGAGTTGGTGGCAACCTTTTCAAAAGTTCAC-AGAGTTGGTGGCAAC
127702 CTTTTCA
120 CTTTTCA
* ** * *
127709 AAAGCCCACACGAGTTAGTGATAACCTTTTCAAAGTTAACACAAGTTGTTGGCAGCCTTTTTAAA
1 AAAGCCCACACGAGTTAGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACCTTTTCAAA
* * * * *
127774 AGTGCACATGAGTTGGTGGCAACCTTTTCAAAAG-TCTATGAGAGCTGGTCGCAACCTTTTCA
66 AGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGTTC-A-CAGAGTTGGTGGCAACCTTTTCA
* *
127836 AAAGCCCACACGAGTTAGTGACAACCTTTTCAAAATCCACATAAGTTGTTGGCAACCTTTTCAAA
1 AAAGCCCACACGAGTTAGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACCTTTTCAAA
** * * * * * *
127901 AGCTCTTC-CAAGTTGGTGACAATCTTTTCAAAA-TTCCACATGAGTTGATAGCAAACTTTTCA
66 AG-TCCACACGAGTTGGTGGCAACCTTTTCAAAAGTT-CACA-GAGTTGGTGGCAACCTTTTCA
* * * * * * **
127963 AAAGCTCATACGAGTTGGTGACATCCTTTTGAAAGTCCACACCAGTTGTTGGCAATATTTTCAAA
1 AAAGCCCACACGAGTTAGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACCTTTTCAAA
* * * *
128028 AGTCCACACGAGTTGGTGGTAACCTTTTTAAAAGCTCACACGAGTTGCTGGCAA-CTTTTACA
66 AGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGTTCACA-GAGTTGGTGGCAACCTTTT-CA
* * * ** * * ** * *
128090 AAAACCCACACGAATTGGTGGTACCCTTTTTAAAAACC-CACAGGAGTTGGTGGTAACCTTTTC-
1 AAAGCCCACACGAGTTAGTGACAACCTTTTCAAAGTCCACACA--AGTTGTTGGCAACCTTTTCA
* * * ** * *
128153 AAAGTTCACACGGGTTTGTGGC-ACCATAGTC-AAAGTGT-ACATGAGTTGGTAGTAACCTTTTC
64 AAAGTCCACACGAGTTGGTGGCAACC-TTTTCAAAAGT-TCACA-GAGTTGGTGGCAACCTTTTC
128215 A
126 A
128216 AAAGCC
1 AAAGCC
128222 TATACGTGTT
Statistics
Matches: 510, Mismatches: 110, Indels: 58
0.75 0.16 0.09
Matches are distributed among these distances:
126 42 0.08
127 322 0.63
128 46 0.09
129 3 0.01
133 3 0.01
135 74 0.15
136 19 0.04
137 1 0.00
ACGTcount: A:0.31, C:0.21, G:0.20, T:0.28
Consensus pattern (126 bp):
AAAGCCCACACGAGTTAGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACCTTTTCAAA
AGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGTTCACAGAGTTGGTGGCAACCTTTTCA
Found at i:131379 original size:52 final size:52
Alignment explanation
Indices: 131309--131429 Score: 224
Period size: 52 Copynumber: 2.3 Consensus size: 52
131299 GAAAATTTAT
*
131309 CTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAATTTGC
*
131361 CTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAATTTGC
131413 CTGCATGTATCGATACA
1 CTGCATGTATCGATACA
131430 AAGATCAGTG
Statistics
Matches: 67, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
52 67 1.00
ACGTcount: A:0.29, C:0.18, G:0.18, T:0.35
Consensus pattern (52 bp):
CTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAATTTGC
Found at i:131442 original size:52 final size:51
Alignment explanation
Indices: 131309--131449 Score: 212
Period size: 52 Copynumber: 2.7 Consensus size: 51
131299 GAAAATTTAT
131309 CTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTGGGCAAATTTGC
* *
131361 CTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTGGGCAAATTTGC
*
131413 CTGCATGTATCGATACA-AAGATCAGTGTATCGATACA
1 CTGCATGTATCGATACATTA-AT-AGTGTATCGATACA
131450 ATGTATCGAT
Statistics
Matches: 82, Mismatches: 5, Indels: 4
0.90 0.05 0.04
Matches are distributed among these distances:
51 2 0.02
52 80 0.98
ACGTcount: A:0.30, C:0.18, G:0.18, T:0.33
Consensus pattern (51 bp):
CTGCATGTATCGATACATTAATAGTGTATCGATACATCTGGGCAAATTTGC
Found at i:131456 original size:13 final size:13
Alignment explanation
Indices: 131438--131462 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
131428 CAAAGATCAG
131438 TGTATCGATACAA
1 TGTATCGATACAA
131451 TGTATCGATACA
1 TGTATCGATACA
131463 TTTAAGTGAT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:132368 original size:67 final size:68
Alignment explanation
Indices: 132243--132369 Score: 150
Period size: 67 Copynumber: 1.9 Consensus size: 68
132233 ATTGGGTTTT
* * * *
132243 AAAGATGATGAAGGTGCCAATATGCTAATTCAAGGCCAGCAATATTGGACTTAGAGATGAAGATG
1 AAAGATGATAAAGATGCCAATATGCTAATTCAAGGCCAACAATATTGGACTTAAAGATGAAGATG
132308 AGA
66 AGA
* * * * *
132311 AAAG-TGATAAAGATGCCAATCTGTTGATTCACGGCCAACGATATT-GAGCTTAAAGATGA
1 AAAGATGATAAAGATGCCAATATGCTAATTCAAGGCCAACAATATTGGA-CTTAAAGATGA
132370 GAAAAAAGAT
Statistics
Matches: 49, Mismatches: 9, Indels: 3
0.80 0.15 0.05
Matches are distributed among these distances:
66 2 0.04
67 43 0.88
68 4 0.08
ACGTcount: A:0.39, C:0.13, G:0.24, T:0.24
Consensus pattern (68 bp):
AAAGATGATAAAGATGCCAATATGCTAATTCAAGGCCAACAATATTGGACTTAAAGATGAAGATG
AGA
Found at i:132418 original size:55 final size:52
Alignment explanation
Indices: 132319--132659 Score: 261
Period size: 49 Copynumber: 6.9 Consensus size: 52
132309 GAAAAGTGAT
* * * * * * *
132319 AAAGATGCCAATCTGTTGATTCACGGCCAACGATATTGAGCTTAAAGATGAGAAA
1 AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATG-G--A
* * *
132374 AAAGATGTCAATGTGCTGATTCAAGGCCAGCTACGTTGAACTTAAAGATGGA
1 AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGA
* * *
132426 AAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTT-AA-A--G-
1 AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGA
* * * *
132473 ---G-TGCCAATGTGCTGATTCAAGGCTAGCTACATTGGACTTAAAGGT-G-
1 AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGA
* * * *
132519 --AGGTGCCAATGTGCTGATTCAAGGCCAGCTACACTGGACTTAAAGAT-G-
1 AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGA
* * * *
132567 -AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGAT---
1 AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGA
* * * *
132615 AAAGGTGCCAATATGCTAATTCAAGGCCAGCTATATTGGACTTAA
1 AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAA
132660 TGGTGCCAAT
Statistics
Matches: 251, Mismatches: 28, Indels: 20
0.84 0.09 0.07
Matches are distributed among these distances:
43 35 0.14
44 3 0.01
46 1 0.00
47 1 0.00
48 43 0.17
49 85 0.34
50 1 0.00
51 2 0.01
52 38 0.15
54 1 0.00
55 41 0.16
ACGTcount: A:0.33, C:0.18, G:0.25, T:0.25
Consensus pattern (52 bp):
AAAGATGCCAATATGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGA
Found at i:132487 original size:43 final size:43
Alignment explanation
Indices: 132426--132701 Score: 291
Period size: 43 Copynumber: 6.0 Consensus size: 43
132416 TAAAGATGGA
* *
132426 AAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTT
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
*
132469 AAAGGTGCCAATGTGCTGATTCAAGGCTAGCTACATTGGACTT
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
*
132512 AAAGGTGAGGTGCCAATGTGCTGATTCAAGGCCAGCTACACTGGACTT
1 -AA----AGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
*
132560 AAAGATGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGAT
1 ----A--AAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGAC-T-----T
* * *
132615 AAAGGTGCCAATATGCTAATTCAAGGCCAGCTATATTGGACTT
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
* * * *
132658 AATGGTGCCAATGTGCTGAGTCAAGGCCAGCTATATTGGGCTT
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
132701 A
1 A
132702 GAATGGTTGC
Statistics
Matches: 200, Mismatches: 17, Indels: 32
0.80 0.07 0.13
Matches are distributed among these distances:
43 80 0.40
44 2 0.01
48 40 0.20
49 73 0.37
50 1 0.00
51 2 0.01
53 1 0.00
55 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.26, T:0.26
Consensus pattern (43 bp):
AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTT
Found at i:132591 original size:49 final size:49
Alignment explanation
Indices: 132382--132701 Score: 387
Period size: 49 Copynumber: 6.7 Consensus size: 49
132372 AAAAAGATGT
* *
132382 CAATGTGCTGATTCAAGGCCAGCTACGTTGAACTTAAAGATGGAAAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-G--AAGGTGC
* *
132434 CAATATGCTGATTCAAGGCCAGCTATATTGGACTT----A--AAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
132477 CAATGTGCTGATTCAAGGCTAGCTACATTGGACTTAAAGGTG-AGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
*
132525 CAATGTGCTGATTCAAGGCCAGCTACACTGGACTTAAAGATGAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
132574 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
132623 CAATATGCTAATTCAAGGCCAGCTATATTGGACTT--A-AT---GGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
132666 CAATGTGCTGAGTCAAGGCCAGCTATATTGGGCTTA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTA
132702 GAATGGTTGC
Statistics
Matches: 238, Mismatches: 22, Indels: 24
0.84 0.08 0.08
Matches are distributed among these distances:
43 75 0.32
46 2 0.01
47 1 0.00
48 46 0.19
49 83 0.35
52 31 0.13
ACGTcount: A:0.30, C:0.18, G:0.26, T:0.26
Consensus pattern (49 bp):
CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
Found at i:132745 original size:33 final size:33
Alignment explanation
Indices: 132701--132871 Score: 267
Period size: 33 Copynumber: 5.2 Consensus size: 33
132691 TATTGGGCTT
*
132701 AGAATGGTTGCCACCGACTTGTGTGGGCTTTAG
1 AGAAGGGTTGCCACCGACTTGTGTGGGCTTTAG
132734 AGAAGGGTTGCCACCGACTTGTGTGGGCTTTAG
1 AGAAGGGTTGCCACCGACTTGTGTGGGCTTTAG
* *
132767 AAAAGGGTTGCCACCGACTTGTGTGGGCTTTAAA
1 AGAAGGGTTGCCACCGACTTGTGTGGGCTTT-AG
*
132801 AGAA-GGTTGCCACCGACTTGTGTGGGCTTTAAA
1 AGAAGGGTTGCCACCGACTTGTGTGGGCTTT-AG
132834 AGAA-GGTTGCCACCGACTTGTGTGGGCTTT-G
1 AGAAGGGTTGCCACCGACTTGTGTGGGCTTTAG
132865 AGAAGGG
1 AGAAGGG
132872 AGAAAGATGC
Statistics
Matches: 131, Mismatches: 5, Indels: 5
0.93 0.04 0.04
Matches are distributed among these distances:
31 4 0.03
32 2 0.02
33 121 0.92
34 4 0.03
ACGTcount: A:0.22, C:0.18, G:0.34, T:0.27
Consensus pattern (33 bp):
AGAAGGGTTGCCACCGACTTGTGTGGGCTTTAG
Found at i:132919 original size:35 final size:36
Alignment explanation
Indices: 132854--133296 Score: 607
Period size: 35 Copynumber: 12.7 Consensus size: 36
132844 CACCGACTTG
* *
132854 TGTGGGCTTTGAGAAGGGAGAAAGA-TGCCACGGAGT
1 TGTGGGCTTT-AAAAGGGAAAAAGAGTGCCACGGAGT
* * *
132890 TGTAGAC-TTAAAAGGGAAAAATAGTGCCACGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
132925 TGTGGGCTTTAAAA--GAAAAAG-GTGCCACGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
132958 TGTGGGCTTTGAAAAGGGAAAAAGAGTGCCACGGAGT
1 TGTGGGCTTT-AAAAGGGAAAAAGAGTGCCACGGAGT
*
132995 TGTGGAC-TTAAAAGGGAAAAAGAGTGCCACGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
133030 TGTGGGCTTTAAAA--GAAAAAG-GTGCCACGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
*
133063 TGTGGGTTTTGAAAAGGGAAAAAGAGTGCCACGGAGT
1 TGTGGGCTTT-AAAAGGGAAAAAGAGTGCCACGGAGT
*
133100 TGTGGAC-TTAAAAGGGAAAAAGAGTGCCACGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
*
133135 TGTGGGCTTTAAAA--GAAAAAG-GTGCCACAGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
*
133168 TGTGGGCTTTGAAA-GGAAAAAGAGTGCCACGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
* *
133203 TGTGGAC-TTAAAAGGGAAAAAGAGTGCCATGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
133238 TGTGGGCTTTAAAA--GAAAAAG-GTGCCACGGAGT
1 TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
*
133271 TGTGGGTTTTGAAAAGGGAAAAAGAG
1 TGTGGGCTTT-AAAAGGGAAAAAGAG
133297 CGCCCGGTGA
Statistics
Matches: 364, Mismatches: 23, Indels: 39
0.85 0.05 0.09
Matches are distributed among these distances:
33 87 0.24
34 62 0.17
35 125 0.34
36 54 0.15
37 36 0.10
ACGTcount: A:0.35, C:0.10, G:0.35, T:0.20
Consensus pattern (36 bp):
TGTGGGCTTTAAAAGGGAAAAAGAGTGCCACGGAGT
Found at i:133025 original size:105 final size:105
Alignment explanation
Indices: 132821--133296 Score: 793
Period size: 105 Copynumber: 4.6 Consensus size: 105
132811 CACCGACTTG
* * * *
132821 TGTGGGCTTTAAAAG---AAGGTTGCCACCGACTTGTGTGGGCTTTGAGAAGGGAGAAAGA-TGC
1 TGTGGGCTTTAAAAGAAAAAGG-TGCCACGGA-GT-TGTGGGCTTTGAAAAGGGAAAAAGAGTGC
* *
132882 CACGGAGTTGTAGACTTAAAAGGGAAAAATAGTGCCACGGAGT
63 CACGGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGT
132925 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCAC
1 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCAC
132990 GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGT
66 GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGT
*
133030 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGTTTTGAAAAGGGAAAAAGAGTGCCAC
1 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCAC
133095 GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGT
66 GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGT
*
133135 TGTGGGCTTTAAAAGAAAAAGGTGCCACAGAGTTGTGGGCTTTG-AAA-GGAAAAAGAGTGCCAC
1 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCAC
*
133198 GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCATGGAGT
66 GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGT
*
133238 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGTTTTGAAAAGGGAAAAAGAG
1 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAG
133297 CGCCCGGTGA
Statistics
Matches: 354, Mismatches: 12, Indels: 11
0.94 0.03 0.03
Matches are distributed among these distances:
103 97 0.27
104 44 0.12
105 201 0.57
106 8 0.02
107 4 0.01
ACGTcount: A:0.34, C:0.11, G:0.35, T:0.21
Consensus pattern (105 bp):
TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCAC
GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGT
Found at i:133272 original size:208 final size:210
Alignment explanation
Indices: 132821--133296 Score: 802
Period size: 208 Copynumber: 2.3 Consensus size: 210
132811 CACCGACTTG
* * * * *
132821 TGTGGGCTTTAAAAG---AAGGTTGCCACCGACTTGTGTGGGCTTTGAGAAGGGAGAAAGA-TGC
1 TGTGGGCTTTAAAAGAAAAAGG-TGCCACGGA-GT-TGTGGGTTTTGAAAAGGGAAAAAGAGTGC
*
132882 CACGGAGTTGTAGACTTAAAAGGGAAAAATAGTGCCACGGAGTTGTGGGCTTTAAAAGAAAAAGG
63 CACGGAGTTGTAGACTTAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGGCTTTAAAAGAAAAAGG
*
132947 TGCCACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGACTTAAAAGGGA
128 TGCCACAGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGACTTAAAAGGGA
133012 AAAAGAGTGCCACGGAGT
193 AAAAGAGTGCCACGGAGT
133030 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGTTTTGAAAAGGGAAAAAGAGTGCCAC
1 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGTTTTGAAAAGGGAAAAAGAGTGCCAC
*
133095 GGAGTTGTGGACTTAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGGCTTTAAAAGAAAAAGGTGC
66 GGAGTTGTAGACTTAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGGCTTTAAAAGAAAAAGGTGC
133160 CACAGAGTTGTGGGCTTTG-AAA-GGAAAAAGAGTGCCACGGAGTTGTGGACTTAAAAGGGAAAA
131 CACAGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGACTTAAAAGGGAAAA
*
133223 AGAGTGCCATGGAGT
196 AGAGTGCCACGGAGT
133238 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGTTTTGAAAAGGGAAAAAGAG
1 TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGTTTTGAAAAGGGAAAAAGAG
133297 CGCCCGGTGA
Statistics
Matches: 254, Mismatches: 9, Indels: 9
0.93 0.03 0.03
Matches are distributed among these distances:
208 114 0.45
209 40 0.16
210 88 0.35
211 8 0.03
212 4 0.02
ACGTcount: A:0.34, C:0.11, G:0.35, T:0.21
Consensus pattern (210 bp):
TGTGGGCTTTAAAAGAAAAAGGTGCCACGGAGTTGTGGGTTTTGAAAAGGGAAAAAGAGTGCCAC
GGAGTTGTAGACTTAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGGCTTTAAAAGAAAAAGGTGC
CACAGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCACGGAGTTGTGGACTTAAAAGGGAAAA
AGAGTGCCACGGAGT
Found at i:133511 original size:32 final size:32
Alignment explanation
Indices: 133398--134236 Score: 400
Period size: 32 Copynumber: 26.2 Consensus size: 32
133388 TCTACAGTAG
* * *
133398 CCTTTTTAAAAGCCTACACGAGTTGGTGGCAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* **
133430 -CTATTTC-AAAGTCCACACCAGTTAGG-GGCAA
1 CCT-TTTCAAAAGCCCACAAGAGTT-GGTGGCAA
* *
133461 CC-TTTCAAAAGTCTACAAGAGTTGGTGGCAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
**
133492 CCTTTTCAAAAGCCCACAAGAGTTGGAAGCAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * *
133524 -CTATTTCAATA-TCCACACGAGTTGGTGGCAA
1 CCT-TTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * * * *
133555 CCTTTTGAAAAGTCTATAAGAGTTGGTGGTAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* **
133587 CCTTTTCAAAAGCCCACACGAGTTGGTAACAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * * *
133619 TCTTTTCAAAAGCCCATACGAGTTGGTGACAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * * *** *
133651 CTTTTTCAGAATCTTGCAAGAGTTGGTGGTAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * * * *
133683 CCTTTTCAAAATCCCACACGTGTTGGTAGAAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * * * * *
133715 CATTTTCAAAGGCCTACATGAGTTTGTGGTAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * * *
133747 -CGTTTCAAAAGTCCACACA-AGTTGTTTGCAA
1 CCTTTTCAAAAGCCCACA-AGAGTTGGTGGCAA
* ** * * *
133778 CTTTTTCAAAATTCCACACGAGCTGGTGACAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * * * * * *
133810 CTTTTTTAAAATCTCGCGTA-AGTTGGTGGTAA
1 CCTTTTCAAAAGCCCAC-AAGAGTTGGTGGCAA
* * *
133842 CATTTTCAAAAGTCCACAAGAGTTGGTGACAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * *
133874 CCTTTTCAAAAGCCTAAAAGCCCACACA-AATTAGTAGCAA
1 CCTTTT-------C-AAAAGCCCACA-AGAGTTGGTGGCAA
* * * * * *
133914 TCATTTT--AAAGTCTAGACGAGTTAGTGGCAA
1 -CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* ** * * *
133945 CCTTTTTAAAATTCTACAATAGTCGGTGGCAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* ** *
133977 CCTTTTCAAAAGCTCACCTGAGTTGGTGACAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * *
134009 CCTTTTCAAAA-TCCACACA-AGTTGTTGACAA
1 CCTTTTCAAAAGCCCACA-AGAGTTGGTGGCAA
* **
134040 CCTTTTCAAAAGCCCATACA-AGTTGGTGATAA
1 CCTTTTCAAAAGCCCACA-AGAGTTGGTGGCAA
* *
134072 CCTTTTCAAAATCCCACACGAGTTGGTGGCAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
** * * * *
134104 TATTTTCAAAATCCTACATGAGTTGGTAGCAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
* * *
134136 -CTTTTCAAAGGCCCACGCA-AGTTGGTGGTAA
1 CCTTTTCAAAAGCCCAC-AAGAGTTGGTGGCAA
** ** * *
134167 TATTTTCAAAAATCCATACA-AGTTGGTAGCAA
1 CCTTTTCAAAAGCCCACA-AGAGTTGGTGGCAA
* ** *
134199 CCTTTTTAAAAGCCCACTTGAGTTGGTGGTAA
1 CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
134231 CCTTTT
1 CCTTTT
134237 TAAAGTTCAC
Statistics
Matches: 600, Mismatches: 173, Indels: 68
0.71 0.21 0.08
Matches are distributed among these distances:
30 11 0.02
31 149 0.25
32 415 0.69
39 1 0.00
40 18 0.03
41 6 0.01
ACGTcount: A:0.32, C:0.21, G:0.18, T:0.29
Consensus pattern (32 bp):
CCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA
Found at i:133657 original size:64 final size:64
Alignment explanation
Indices: 133399--136339 Score: 748
Period size: 63 Copynumber: 45.9 Consensus size: 64
133389 CTACAGTAGC
* * * *
133399 CTTTTT-AAAAGCCTACACGAGTTGGTGGCAA-CTATTTC-AAAGTCCACACCAGTTAGG-GGCA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCT-TTTCAAAAGCCCACACGAGTT-GGTGACA
133460 A
64 A
* * * * * *
133461 C-CTTTCAAAAGTCTACAAGAGTTGGTGGCAACCTTTTCAAAAGCCCACAAGAGTTGG-AAGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGA-CAA
* * * * * * * * **
133524 CTATTTCAATA-TCCACACGAGTTGGTGGCAACCTTTTGAAAAGTCTATAAGAGTTGGTGGTAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* ** * *
133587 CCTTTTCAAAAGCCCACACGAGTTGGTAACAATCTTTTCAAAAGCCCATACGAGTTGGTGACAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * *** * * * *
133651 CTTTTTCAGAATCTTGCAAGAGTTGGTGGTAACCTTTTCAAAATCCCACACGTGTTGGTAGA-AA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGT-GACAA
* * * * * * * * * *
133715 CATTTTCAAAGGCCTACATGAGTTTGTGGTAA-CGTTTCAAAAGTCCACACAAGTTGTTTG-CAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTG-GTGACAA
** * * * * * * * *** **
133778 CTTTTTCAAAATTCCACACGAGCTGGTGACAACTTTTTTAAAATCTCGCGTAAGTTGGTGGTAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * * * *
133842 CATTTTCAAAAGTCCACAAGAGTTGGTGACAACCTTTTCAAAAGCCTAAAAGCCCACACAAATTA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-------C-AAAAGCCCACACGAGTTG
133907 GT-AGCAA
58 GTGA-CAA
* * * * * * ** * ** * *
133914 TCATTTT--AAAGTCTAGACGAGTTAGTGGCAACCTTTTTAAAATTCTACAATAGTCGGTGGCAA
1 -CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * * *
133977 CCTTTTCAAAAGCTCAC-CTGAGTTGGTGACAACCTTTTCAAAA-TCCACACAAGTTGTTGACAA
1 CTTTTTCAAAAGCCCACAC-GAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * ** * *
134040 CCTTTTCAAAAGCCCATACAAGTTGGTGATAACCTTTTCAAAATCCCACACGAGTTGGTGGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * * * * **
134104 -TATTTTCAAAATCCTACATGAGTTGGTAGCAA-CTTTTCAAAGGCCCACGCAAGTTGGTGGTAA
1 CT-TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
** * * * * ** **
134167 -TATTTTCAAAAATCCATACAAGTTGGTAGCAACCTTTTTAAAAGCCCACTTGAGTTGGTGGTAA
1 CT-TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
** * **
134231 CCTTTTT--AAAGTTCACACGAGTTTGTGGC-ACCATAGTC-AAAGCCCA-AC-AGTTTCAGAAG
1 -CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAAGCCCACACGAG-TT--G--G
*
134290 T-TCACA
59 TGACA-A
* *** * ** ** *
134296 CTAGTTGGTGGCAACCTTTTCAAAGTTTATAAAAGTTGGTGGC-ACCATAGTC-AAAGTCCACAC
1 CT--TT--T-TC-A-------AAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAAGCCCACAC
** *
134359 GAGTAAGTGGCAA
52 GAGTTGGTGACAA
** * * * * *
134372 CATTTTT-AAAAGCCCACATAAATTGATGGGAACCATTTCAAAAGCTCACACGAGTTGGT-AGCA
1 C-TTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGA-CA
*
134435 GC
64 -A
* * * *
134437 CTTAATT--AAAGCCCACACGCA-TTGATGGCAACTTTTTCAAAA-TCCACAC-ATGTTGGTGAC
1 CTT-TTTCAAAAGCCCACACG-AGTTGGTGGCAACCTTTTCAAAAGCCCACACGA-GTTGGTGAC
134497 AA
63 AA
* * * * *
134499 CCTTTTTAAAAACCCAAAAGCCCACATGAGTTAGTGGCAACCGTTTCAAAAGTCTACGA-GAGTT
1 -CTTTTT-------CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCAC-ACGAGTT
*
134563 GGTGGCAAA
57 GGTGAC-AA
* ** *** * * * ** * ** **
134572 CCTTTTT-AAAAGCTGCCGCA--AGTTAATAATAAACTTTTC-AAAGTCAACATAAATTATTGGT
1 -CTTTTTCAAAAGC--CCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGAC
134633 AA
63 AA
* * * * * *
134635 CCTTTTCAAAAGCCCACACGAATTGGTGACAACCTTTTCAAAATCACACATGAGTTGGT-AGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGA-CAA
* * * * * ** * *
134699 -TCTTTTCAAAAACACATA-GTGTTGGTGACAACCTTTTC-AAAGTACACACAAGTTGTTGGA-A
1 CT-TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGT-GACA
134760 A
64 A
* * * * * * * * ** * *
134761 CTTTTTTAGAAGCCCACATGGGTTGGTGACAAACTTTTTAAAA-TCCACATAAGTTGTTGGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * *
134824 CCTTTTCAAAAAGCCCATACGAGTTGGTGGCAACCCTTTT-AAAATCCCACTCGAGTTGGTAAC-
1 CTTTTTC-AAAAGCCCACACGAGTTGGTGGCAA-CCTTTTCAAAAGCCCACACGAGTTGGTGACA
134887 A
64 A
* * * ** * * * ** * * * * **
134888 CCTTTTCAAAATCCCACACAAGTTGGTAACATCTTTTTCGATGGCCCATATGAATTCGTGGTAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * *
134952 -TCTTTTCAAAAGCCTACACGAGTTGGTGGC-ACCTTTTACAAAAGTCTAC-CTAAGTTGGTG-C
1 CT-TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAAGCCCACAC-GAGTTGGTGAC
135013 AA
63 AA
** * * * * * * *
135015 GGATTTTC-AAAGCCAAAATGAGTTGTTGGCAACCTTTTCAAAAGCCCACA-GAAGTTAGAGGCA
1 -CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACG-AGTTGGTGACA
135078 A
64 A
* * ** ** ** * *
135079 CCTTTAC-AAAGTTCACACGAGTTTATGGC-ACCATAGTC-AAAGTCCACACGAGTTGG-GTATA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAAGCCCACACGAGTTGGTG-ACA
135140 A
64 A
* * * * *** * * * * *
135141 -TATTTTCAAAAGCTCACATGAGTTGCTGGTAACCTTTT-TGTAGTCTATACAAGTTGG-CAGCA
1 CT-TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGA-CA
*
135203 C
64 A
* ** * **** * *
135204 CATAGTC-AAAGTCCACAC-AGATTGGTGGCAACAAAGTC-AAAGTCCACACGAGTTGGTGGCAA
1 CTTTTTCAAAAGCCCACACGAG-TTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * ** ** * *
135266 CATTTTCAAAAGCCCACATGAGTTGGTAGCAACCTTTTCGGAAGCGGACACGAGTTGCTCG-CAG
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGT-GACAA
** * ** * ** * * **
135330 CTTTTTTTAAAGCCCACACGACTTAATGTCAACCTTTTC-AAAGTTCACACGAGATAGTGGTAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * * **** * *
135393 CCTTTTCAAAAGTCCAAAAACCCACACAAGTTGGAGCCAACCATTTC-AAAGTTTGCATGACTTG
1 -CTTTT------T-CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTG
*
135457 GTGGCAA
58 GTGACAA
* * * * * * *
135464 CATTGTCAAAAGTCCACACGAGTTGGTGGCAAACTTTTC-AAAGCCTACACGAGTTGTTGGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * * * * **
135527 CCTTTTT-AAAAGCTCACACAAGTTAGTGGCAA-CTTTTACAAAAACCTACATGTGTTGGTGGTA
1 -CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAAGCCCACACGAGTTGGTGACA
135590 A
64 A
* * ** *
135591 TCTTTTT-AAAAGCCCACACGAGTTGGTGGTAACCTTTT-TAAAGTTCACACGAGTTTGT-AGCA
1 -CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGA-CA
*
135653 C
64 A
* ** ** * * * * * * * * * **
135654 CATAGTC-GTAGTCTACACGAGTTGGTGGTAACATTTTTAAAAGTCTATACGAGTTGATGGTAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
** * * * * ** *
135717 CCATTTCAAAAGCCCACACGAATTGGTGGCAACCTTTT-TAAAGTCCATATAAGTTGGTGGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * * * * *
135780 CCTTTTCAAAAGCCCACACAAGTTGTTGGTAGCACTTTT-AAAAGCCTACACGAGTTGATGGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * ** * * * *
135844 CCTTTTCAAAGGCCCACACGAATTGGTGGTAACCTTTTTGAAAGTCCATAAGAGTTGGTGATAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
** * * * * * *
135908 CCATTTC-AAAG-CCACACGAGTTGTTAGCAACTTTTTTAAAAGCCCAAATGAGTTGGTGACAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * *
135970 CTTTTTCAATAA-CCCACATGAGTTGGTGGCAACCTTTTTAAAAGACCACACGATTTGGTGACAA
1 CTTTTTCAA-AAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* ** * * ** * * * **
136034 CTTTTTC-AATGTTCACACAAGTTTGTGGC-ACCATAGTC-AAAGTCCACAAGAGTTGATGGTAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAAGCCCACACGAGTTGGTGACAA
* ** * * * ** * *
136096 CTTTTTTAAAAATCTACACGAGTTGATGGCAGCC-AATCAAAAGCCCACACGAATTGGTGGCAA
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * * * * ** *
136159 CCTTTTC-AAAGTCCATATGAGTTGATGGCAACCTTTTCGAAAGCCCACACGAGTTGTTGGTAG
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
* * * * *
136222 CCTTTTCAATAAGCCCACACGAGTTGATGGCAACCTTTTC-AAAGTCCACATGAATTGG-G-CGT
1 CTTTTTCAA-AAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGAC--
136284 AA
63 AA
* * * * *
136286 CCTTTTC-ACAGCCCACACGAATTGGGGGCAATCTTTTC-AAAGCCCACACGAGTT
1 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTT
136340 AATGGTAACC
Statistics
Matches: 2100, Mismatches: 620, Indels: 318
0.69 0.20 0.10
Matches are distributed among these distances:
60 2 0.00
61 12 0.01
62 319 0.15
63 764 0.36
64 723 0.34
65 81 0.04
66 3 0.00
67 4 0.00
68 1 0.00
70 6 0.00
71 93 0.04
72 27 0.01
73 18 0.01
75 2 0.00
76 4 0.00
77 3 0.00
79 33 0.02
80 3 0.00
81 2 0.00
ACGTcount: A:0.32, C:0.21, G:0.19, T:0.28
Consensus pattern (64 bp):
CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
Found at i:133699 original size:96 final size:97
Alignment explanation
Indices: 133398--134144 Score: 411
Period size: 95 Copynumber: 7.8 Consensus size: 97
133388 TCTACAGTAG
* * * ** * *
133398 CCTTTTTAAAAGCCTACACGAGTTGGT-GGCAACTATTTCAAAGTCCACACCAGTTAGG-GGCAA
1 CCTTTTCAAAAGCCCACACGAGTTGGTAAGCAACTATTTCAAAACCCACACGAGTT-GGTGACAA
*
133461 CC-TTTCAAAAGTCTA-CAAGAGTTGGTGGCAA
65 CCTTTTCAAAAGTCTATCAAGAGTTGGTGGTAA
* * * *
133492 CCTTTTCAAAAGCCCACAAGAGTTGG-AAGCAACTATTTCAATATCCACACGAGTTGGTGGCAAC
1 CCTTTTCAAAAGCCCACACGAGTTGGTAAGCAACTATTTCAAAACCCACACGAGTTGGTGACAAC
*
133556 CTTTTGAAAAGTCTAT-AAGAGTTGGTGGTAA
66 CTTTTCAAAAGTCTATCAAGAGTTGGTGGTAA
*
133587 CCTTTTCAAAAGCCCACACGAGTTGGTAA-CAATCT-TTTCAAAAGCCCATACGAGTTGGTGACA
1 CCTTTTCAAAAGCCCACACGAGTTGGTAAGCAA-CTATTTCAAAA-CCCACACGAGTTGGTGACA
* *
133650 ACTTTTTCAGAA-TCT-TGCAAGAGTTGGTGGTAA
64 ACCTTTTCAAAAGTCTAT-CAAGAGTTGGTGGTAA
* * * * * * * **
133683 CCTTTTCAAAATCCCACACGTGTTGGT-AGAAAC-ATTTTCAAAGGCCTACATGAGTTTGTGGTA
1 CCTTTTCAAAAGCCCACACGAGTTGGTAAGCAACTA-TTTCAAA-ACCCACACGAGTTGGTGACA
* * * * *
133746 A-CGTTTCAAAAGTCCA-CACA-AGTTGTTTGCAA
64 ACCTTTTCAAAAGTCTATCA-AGAGTTGGTGGTAA
* ** * * * * * * * **
133778 CTTTTTCAAAATTCCACACGAGCTGGTGA-CAACTTTTTTAAAA-TCTCGCGTAAGTTGGTGGTA
1 CCTTTTCAAAAGCCCACACGAGTTGGTAAGCAACTATTTCAAAACCCACACG--AGTTGGTGACA
* * **
133841 ACATTTTCAAAAGTCCA-CAAGAGTTGGTGACAA
64 ACCTTTTCAAAAGTCTATCAAGAGTTGGTGGTAA
* * * * ** * *
133874 CCTTTTCAAAAGCCTAAAAGCCCACACAAATTAGT-AGCAA-TCATTTTAAAGTCTAGACGAGTT
1 CCTTTT-------C-AAAAGCCCACACGAGTTGGTAAGCAACT-ATTTCAAAACCCACACGAGTT
* * * * * * *
133937 AGTGGCAACCTTTTTAAAATTCTA-CAATAGTCGGTGGCAA
57 GGTGACAACCTTTTCAAAAGTCTATCAAGAGTTGGTGGTAA
* * * * *
133977 CCTTTTCAAAAGCTCAC-CTGAGTTGGTGA-CAACCT-TTTCAAAATCCACACAAGTTGTTGACA
1 CCTTTTCAAAAGCCCACAC-GAGTTGGTAAGCAA-CTATTTCAAAACCCACACGAGTTGGTGACA
* * *
134039 ACCTTTTCAAAAGCCCAT-ACA-AGTTGGTGATAA
64 ACCTTTTCAAAAGTCTATCA-AGAGTTGGTGGTAA
* * * *
134072 CCTTTTCAAAATCCCACACGAGTTGGT-GGCAA-TATTTTCAAAATCCTACATGAGTTGGT-AGC
1 CCTTTTCAAAAGCCCACACGAGTTGGTAAGCAACTA-TTTCAAAA-CCCACACGAGTTGGTGA-C
134134 AA-CTTTTCAAA
63 AACCTTTTCAAA
134145 GGCCCACGCA
Statistics
Matches: 505, Mismatches: 103, Indels: 89
0.72 0.15 0.13
Matches are distributed among these distances:
93 5 0.01
94 56 0.11
95 231 0.46
96 142 0.28
97 1 0.00
103 44 0.09
104 24 0.05
105 2 0.00
ACGTcount: A:0.32, C:0.21, G:0.18, T:0.29
Consensus pattern (97 bp):
CCTTTTCAAAAGCCCACACGAGTTGGTAAGCAACTATTTCAAAACCCACACGAGTTGGTGACAAC
CTTTTCAAAAGTCTATCAAGAGTTGGTGGTAA
Found at i:134110 original size:95 final size:95
Alignment explanation
Indices: 133975--134177 Score: 232
Period size: 95 Copynumber: 2.1 Consensus size: 95
133965 AGTCGGTGGC
* * *
133975 AACCTTTTCAAAAGCTCACCTGAGTTGGTGACAACCTTTTCAAAATCC-ACACAAGTT-GTTGAC
1 AACCTTTTCAAAAGCCCACCTGAGTTGGTGACAACATTTTCAAAATCCTACACAAGTTGGTAG-C
*
134038 AACCTTTTCAAAAGCCCATACAAGTTGGTGAT
65 AA-CTTTTCAAAAGCCCACACAAGTTGGTGAT
* * * **
134070 AACCTTTTCAAAATCCCACAC-GAGTTGGTGGCAATATTTTCAAAATCCTACATGAGTTGGTAGC
1 AACCTTTTCAAAAGCCCAC-CTGAGTTGGTGACAACATTTTCAAAATCCTACACAAGTTGGTAGC
* * *
134134 AACTTTTCAAAGGCCCACGCAAGTTGGTGGT
65 AACTTTTCAAAAGCCCACACAAGTTGGTGAT
**
134165 AATATTTTCAAAA
1 AACCTTTTCAAAA
134178 ATCCATACAA
Statistics
Matches: 91, Mismatches: 14, Indels: 6
0.82 0.13 0.05
Matches are distributed among these distances:
95 77 0.85
96 11 0.12
97 3 0.03
ACGTcount: A:0.33, C:0.22, G:0.16, T:0.29
Consensus pattern (95 bp):
AACCTTTTCAAAAGCCCACCTGAGTTGGTGACAACATTTTCAAAATCCTACACAAGTTGGTAGCA
ACTTTTCAAAAGCCCACACAAGTTGGTGAT
Found at i:134126 original size:127 final size:128
Alignment explanation
Indices: 133400--154250 Score: 582
Period size: 127 Copynumber: 163.9 Consensus size: 128
133390 TACAGTAGCC
* * * * **
133400 TTTTTAAAAG-CCTACACGAGTTGGTGGCAA-CTATTTCAAAGT-CCACACCAGTTAGG-GGCAA
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCT-TTTTAAAATCCCACAAGAGTT-GGTGGCAA
* * * *
133461 C-CTTTCAAAAGT-CTACAAGAGTTGGTGGCAACCTTTTCAAAAG-CC-CACAAG-AGTTGGAAG
63 CATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTT-G-A-
133521 CAAC-
124 CAACA
* * * * * *
133525 TATTTCAATA-TCCACACGAGTTGGTGGCAACCTTTTGAAAAGT-CTATAAGAGTTGGTGGTAAC
1 T-TTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAAC
* * * * * * * * * * *
133588 CTTTTCAAAAGCCCACACGAGTTGGTAACAATCTTTTCAAAAGCCCATACGAGTTGGTGACAACT
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* ** * ** * * * * *
133653 TTTTCAGAA-TCTTGCAAGAGTTGGTGGTAACCTTTTCAAAATCCCACACGTGTTGGTAGAAACA
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
** * ** * *
133717 TTTTCAAAGGCCTACATGAGTTTGTGGTAA-CGTTTCAAAAGTCCACACAAGTTGTTTG-CAACT
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTG-TTGACAACA
* * * * * * *
133780 TTTTCAAAATTCCACACGAGCTGGTGACAACTTTTTTAAAATCTCGCGTA-AGTTGGTGGTAACA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCAC-AAGAGTTGGTGGCAACA
* *
133844 TTTTCAAAAGTCC-ACAAGAGTTGGTGACAACCTTTTCAAAAGCCTAAAAGCCCACACAAATTAG
65 TTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAG--T------CCACACAAGTT-G
*
133908 TAG-CAATCA
120 TTGACAA-CA
* * * * * * * * *
133917 TTTT--AAAGTCTAGACGAGTTAGTGGCAACCTTTTTAAAATTCTACAATAGTCGGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * *
133980 TTTCAAAA-GCTCACCTGAGTTGGTGACAACCTTTTCAAAA-TCCACACAAGTTGTTGACAACC
66 TTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * *
134042 TTTTCAAAAGCCCATACAAGTTGGTGATAACCTTTTCAAAATCCCACACGAGTTGGTGGCAATAT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * ** *
134107 TTTCAAAATCCTACATGAGTTGGT-AGCAA-CTTTTCAAAGGCCCACGCAAGTTGGTGGTAATA
66 TTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * ** * *
134169 TTTTCAAAAATCCATACAAGTTGGT-AGCAACCTTTTTAAAAGCCCACTTGAGTTGGTGGTAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * * * * **
134233 TTTTTAAAGTTC-ACACGAGTTTGTGGC-A-C----C-ATAGT---CA-AA---G--CCCAACA
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * ** * * *
134280 GTTTCAGAAGTTCACACTAGTTGGTGGCAACCTTTTCAAAGT-TTATAAAAGTTGGTGGCACCAT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
** * * ** * * * * * * * **
134344 AGTCAAAGTCC-ACACGAGTAAGTGGCAACATTTTTAAAAGCCCACATAAATTGATGGGAACCA
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA-CA
* * * * *
134407 -TTTCAAAAG-CTCACACGAGTTGGT-AGCAGCCTTAATT-AAAGCCCACACGCA-TTGATGGCA
1 TTTTCAAAAGTC-CACACGAGTTGGTGA-CAACCTT-TTTAAAATCCCACAAG-AGTTGGTGGCA
* * * **
134467 ACTTTTTCAAAATCC-ACA-CATGTTGGTGACAACCTTTTTAAAAACCCAAAAGCCCACATGAGT
62 ACATTTTCAAAATCCTACATGA-GTTGGTGACAACC-TTTT-------CAAAAGTCCACACAAGT
* *
134530 TAG-TGGCAACC
118 T-GTTGACAACA
* * * * * ** ***
134541 GTTTCAAAAGTCTACGA-GAGTTGGTGGCAAACCTTTTTAAAAGCTGCCGC-A-AGTTAATAATA
1 TTTTCAAAAGTCCAC-ACGAGTTGGTGAC-AACCTTTTTAAAA--TCCCACAAGAGTTGGTGGCA
* * * * ** ** * *
134603 A-ACTTTTCAAAGT-CAACATAAATTATTGGTAACCTTTTCAAAAGCCCACACGAA-TTGGTGAC
62 ACA-TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACAC-AAGTTGTTGAC
*
134665 AACC
125 AACA
* * * * * *
134669 TTTTCAAAA-TCACACATGAGTTGGT-AGCAATCTTTTCAAAA--ACACATAGTGTTGGTGACAA
1 TTTTCAAAAGTC-CACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAA
* * * ** * * * * * *** *
134730 CCTTTTCAAAGTAC-ACACAAGTTGTTGGA-AACTTTTTTAGAAGCCCACATGGGTTGGTGACAA
63 CATTTTCAAAATCCTACATGAGTTGGT-GACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA
134793 -A
127 CA
* ** * * * * * *
134794 CTTTTTAAAA-TCCACATAAGTTGTTGGCAACCTTTTCAAAAAGCCCATACGAGTTGGTGGCAAC
1 -TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT-TAAAATCCCACAAGAGTTGGTGGCAA-
* * * * *
134858 CCTTTT-AAAATCCCAC-TCGAGTTGGTAAC-ACCTTTTCAAAA-TCCCACACAAGTTGGTAACA
63 CATTTTCAAAATCCTACAT-GAGTTGGTGACAACCTTTTCAAAAGT-CCACACAAGTTGTTGACA
* *
134919 TCT
126 ACA
* ** * * * * * ** * * * * * *
134922 TTTTCGATGGCCCATATGAATTCGTGGTAATCTTTTCAAAAGCCTACACGAGTTGGTGGC-ACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * ** * *
134986 TTTACAAAAGT-CTACCTAAGTTGGTG-CAAGGATTTTC-AAAG-CCA-AAATGAGTTGTTGGCA
66 TTT-CAAAA-TCCTACATGAGTTGGTGACAA-CCTTTTCAAAAGTCCACACA--AGTTGTTGACA
*
135046 ACC
126 ACA
* * * * ** * * * ** *
135049 TTTTCAAAAGCCCACA-GAAGTTAGAGGCAACCTTTACAAAGT-TCACACGAGTTTATGGCACCA
1 TTTTCAAAAGTCCACACG-AGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
** * * * ** ** * **
135112 TAGTCAAAGTCC-ACACGAGTTGG-GTATAATATTTTCAAAAG-CTCACATGAGTTGCTGGTAAC
65 TTTTCAAAATCCTACATGAGTTGGTG-ACAACCTTTTCAAAAGTC-CACACAAGTTGTTGACAAC
*
135174 C
128 A
*** * * * * ** * *
135175 TTTT-TGTAGTCTATACAAGTTGG-CAGC-ACCATAGTCAAAGT-CCACACAGA-TTGGTGGCAA
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACC-TTTTTAAAATCCCACA-AGAGTTGGTGGCAA
*** * * * * * ** *
135235 CAAAGTCAAAGTCC-ACACGAGTTGGTGGCAACATTTTCAAAAGCCCACATGAGTTGGT-AGCAA
63 CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CAA
*
135298 CC
127 CA
** * * * * * * * * ** *
135300 TTTTCGGAAG-CGGACACGAGTTGCTCG-CAGCTTTTTTTAAAGCCCACACGACTTAATGTCAAC
1 TTTTCAAAAGTC-CACACGAGTTGGT-GACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * ** *
135363 CTTTTCAAAGTTC-ACACGAGATAGTGGTAACCTTTTCAAAAGTCCAAAAACCCACACAAGTTGG
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGT--------CCACACAAGTTGT
* *
135427 AGCCAACCA
121 TGACAA-CA
*** * * * * * * *
135436 -TTTC-AAAGTTTGCATGACTTGGTGGCAACATTGTCAAAAGT-CCACACGAGTTGGTGGCAA-A
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * * * * *
135497 CTTTTC-AAAGCCTACACGAGTTGTTGGCAACCTTTTTAAAAG-CTCACACAAGTTAG-TGGCAA
65 -TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTT-GTTGACAA
135559 C-
127 CA
* * * ** * * * *
135560 TTTTACAAAA-ACCTACATGTGTTGGTGGTAATCTTTTTAAAAGCCCACACGAGTTGGTGGTAAC
1 TTTT-CAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * ** ** * * * **
135624 CTTTTTAAAGTTC-ACACGAGTTTGT-AGC-ACCATAGTC-GTAGTCTACACGAGTTGGTGGTAA
64 ATTTTCAAAATCCTACATGAGTTGGTGA-CAACC-TTTTCAAAAGTCCACACAAGTTGTTGACAA
135685 CA
127 CA
* * * * ** * * * * * *
135687 TTTTTAAAAGTCTATACGAGTTGATGGTAACCATTTCAAAAGCCCACACGAATTGGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * ** *
135752 TTTTAAAGTCC-ATATAAGTTGGTGGCAACCTTTTCAAAAGCCCACACAAGTTGTTGGTAGCA
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * ** * * *
135814 CTTTT-AAAAG-CCTACACGAGTTGATGGCAACCTTTTCAAAGGCCCACACGAATTGGTGGTAAC
1 -TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-
* * * * * *
135877 CTTTTTGAAAGTCCATA-A-GAGTTGGTGATAACCATTTC-AAAG-CCACACGAGTTGTT-AGCA
63 CATTTTCAAAATCC-TACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CA
*
135937 ACT
126 ACA
* * * * *
135940 TTTTTAAAAGCCCAAATGAGTTGGTGACAA-CTTTTTCAATAA-CCCACATGAGTTGGTGGCAAC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTT-AA-AATCCCACAAGAGTTGGTGGCAAC
* * * * * * * * * *
136003 CTTTTTAAAAGACC-ACACGATTTGGTGACAACTTTTTC-AATGTTCACACAAGTT-TGTGGCAC
64 ATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGT-TGACAA
136065 CA
127 CA
** * * ** * * * * *
136067 TAGTC-AAAGTCCACAAGAGTTGATGGTAACTTTTTTAAAAAT-CTACACGAGTTGATGGCAGCC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTT-AAAATCCCACAAGAGTTGGTGGCA-AC
* * * * * * * ** * * *
136130 A--ATCAAAAGCCCACACGAATTGGTGGCAACCTTTTC-AAAGTCCATATGAGTTGATGGCAACC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * ** * * * * * *
136192 TTTTCGAAAGCCCACACGAGTTGTTGGTAGCCTTTTCAATAAGCCCACACGAGTTGATGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAA-AATCCCACAAGAGTTGGTGGCAACA
* * * * ** *
136257 TTTTCAAAGTCC-ACATGAATTGG-G-CGTAACCTTTTC-ACAGCCCACACGAA-TTGGGGGCAA
65 TTTTCAAAATCCTACATGAGTTGGTGAC--AACCTTTTCAAAAGTCCACAC-AAGTTGTTGACAA
136317 TC-
127 -CA
* ** ** * * * ** **
136319 TTTTC-AAAGCCCACACGAGTTAATGGTAACCCTTTCAAAGTTTACACAAGTTTGTGGCACCATA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAA-ATCCCACAAGAGT-TGG-----T-
* * * * *
136383 GTCAAAGTCTAACATTTTCAAAAACCCACACGAGTTCGTGGCAA-CTTTTC-AAAGTCCACACAA
58 G-----G-C-AACATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAA
* *
136446 GTTGTTGGCAACT
116 GTTGTTGACAACA
* * * * * * ** *
136459 TTTTCAAAAGCCCACAAGAGTTGGCGGA-AACCTTTTCAAAATCCTACACGAGTTTATGGCAATA
1 TTTTCAAAAGTCCACACGAGTTGG-TGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * * * * * * ** *
136523 TTTTCAAAAGCCTGCACGAGTTGGT-AGCAACCTTTTGAAAGGCCCAAACGAGTTGGTGGTAACC
65 TTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * * * *
136587 TTTTCAAAAGTCCACCCAAGTTGGTGGCAACC-TTTTCAAAGCTCATACGAGTTGTTGGCAACTT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * ** *
136651 TTTCAAAA-GCTCACATGAGTTGGTGACAACTTTTTTAAAA-TGCACACGAGTTGGTGGGAACC
66 TTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * ** * ** * * *
136713 TTTTTAAAAG-CCTACATGAGTTAGTGGTAACCTTTTCAAGGT-TCACACA-AGTTTGTGGCATC
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* ** * * ** * * * * * * *
136775 GTAGTCAAAGTCC-ACATGAGTTGGCGGTAACATTTTCAAATGTCTACACGAGTTGGTGGCAACC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * * * *
136839 TTTTCAAAAGCCCACCCGACTTGTTGGCAACTTTTTTAAAGT-CCATATGAGTTGGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * * * * * * *
136903 TTTCAAAAGCCCATACGAGTTGTTGGCAGCCTTTTTAAAA-TCCTACACGAGTTGATGGCAACC
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGACAACA
* * * * * * * *
136966 TTTTC-AAAGCCCAAAAGAGTTAAGG-G-CAACC-CTTTCAAAGCCCACACGAATTGAG-GGCAA
1 TTTTCAAAAGTCCACACGAGTT--GGTGACAACCTTTTTAAAATCCCACAAGAGTTG-GTGGCAA
* * * * * * ** * * * *
137026 CCTTTT-TAAAGCCCACACGAGTTTGTGGTAACCTTTTC-AAAGTTCACACGAGTTTGTGGCACC
63 CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAG-TTGTTG-ACA
137089 ACA
126 ACA
* ** * * * *
137092 -GTT--AAAGTCCA-AC-A-TTTTTAGA-AGCC--CTT---A---C-C---AGTTGGTGGCAGCC
1 TTTTCAAAAGTCCACACGAGTTGGT-GACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * ** * * * * * *
137138 TTTTCAAAGT-CTATAAAAGTTGGTGGC-A-CTATAGT-GAAAGTCCACACGAGTTGGTGGCAAC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCT-T-TTCAAAAGTCCACACAAGTTGTTGACAAC
137199 A
128 A
* * * * * ** * * * *
137200 TTCTCAAAAG-CTCACATGAGTTGATGGCAACCTTTTCAAAGGCCCACACGAGTTGGTAGCAGCC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* ** * ** * * * * *
137264 TTTTCAAAGTCC-ACACAAGTTGTTGGTAATCTTTTCAAAAG-CTCACATAAGTTGGTGGCAACT
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGACAACA
* * * * * * * *
137327 TTTTCAAAATTCAACACGAGTTGGCGGCAAAC-TTTTAAAATCCCACATGAGTTGGTAGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * ** * ** ** * * * * * ** *
137391 TTTCAAAAGCCTATACAAGTGGGTGGTAAGGTTTACAAATGGCCACACGAGTTGGTGGTAACT
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * ** * * * * * * *
137454 TTTTC-AAAGCCCAAACAAGTTGTTGGTAACCTTTTCAAAAGCCAATAGGAGTAGGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * ** * *
137518 TTTCAAAAATAC-ACACGAGTTGGTGGCAA-CTATTTC-AAAGTCCACATGAGTTGATGGCAAGC
66 TTTC-AAAATCCTACATGAGTTGGTGACAACCT-TTTCAAAAGTCCACACAAGTTGTTGACAA-C
137580 -
128 A
* * * * *
137580 -TTTCAAAAGTCCACAAGAGTTGGTGGCAACC-TTTTAAAAGT-CTACAAGAGTTAGTTGCAAC-
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * * * * * * * *
137641 TGTTTCAAAAGCTTACACGAGTTAGCGGCAA-CTTTT-ACAATGTCTACACCAA-TTGTTGGCAA
65 T-TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCA-AAAGTCCACA-CAAGTTGTTGACAA
*
137703 CC
127 CA
* * ** * **
137705 TTTTCACAAGTCCACATGAGTTGGTGGTAACCTTTTCAAAAGT-TTACAAGAGTTGGTGGCAACA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * * * * * * * *
137769 GTTTCAAAAGCCTATACGAGTTAGTGACAACTTTTTC-GAAGTCCACACTAGTTGTTGGA-AACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTT-GACAACA
* * * * * *
137832 TTTTCAAAAGTCCACACGAGTTTGTGGCAAACTTTTCAAAATCCCACACA-AGTTGGTGGTAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* ** * * * ** * ** *
137896 TTTTCAAAATCCCACACAAGTTCGT-AGCAACCTTTTCAAAGGCCCACATGAGTTGGTGGTAACC
65 TTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * * * * *
137960 TTTTTAAAAATCAACCCGAGTCT-GTGGCAAACTTTTTAAAAGCTCGCATGAGTTGGTGGCAACC
1 TTTTCAAAAGTCCACACGAGT-TGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * **
138024 TTTTCAAAGTTC-ACACGAGTTTGT-ATC-A--TAGTC-AAAGTCCA-AC-A-----T-------
65 TTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* ** * * * * * * *
138069 TTTT-AAAAG-CTCACACGAGTTGGTGGCAACCTTTTCCAAGT-CTATAAAAATTGGTAGCACCA
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
** * * * * * * * * **
138131 TAGTCAAAGTCCAAACA--AGTTGCTTG-CAACATTTTCAAAAGCCCATATAACTTG-AAAGCAA
65 TTTTCAAAATCC-TACATGAGTTG-GTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CAA
*
138192 CC
127 CA
* * * * *
138194 TTTTCAAAAGCCCACACGAGTTGGTGTCAGCCATTTTTAAAA-CTCACACA-AGTTGATGGCAAC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC-TTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* ** * * *
138257 CTTTTCAATGTGC-ACACGAGTTGGTGGCAACCTTTTCAAAAG-CCGAAAGGCCCACAAGAGTTG
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC---A----CAC-A-AGTTG
* ** *
138320 GTGGTAACC
120 TTGACAACA
* * * * * * * * * *
138329 TTTTTAAAAGTCTACGA-GAGTTGGTGGCAAGCTTTTCAAAAGCCCACAAGAGTTAGTGACCACC
1 TTTTCAAAAGTCCAC-ACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * ** * ** * * **
138393 TTTTGAAAGT-CAACACAAGTTGTTGGTAACCTTTTCAAAA-ACGCACACGAGTTAG-TGGTAAC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTT-GTTGACAAC
*
138455 C
128 A
* * * * * *
138456 TTTTCAAAA-TCGCAAACAAGTT-GT-AGCAACCTTTTCAAAAACCCA-TAGAGTTGGTGACAA-
1 TTTTCAAAAGTC-CACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * ** * * * * *
138516 ATTTTTTCAAAGT-CAACACAAGTTGTTGGA-AACTTTTTGAAAAGCCCACACGAGTTGGTT-AC
64 A--TTTTCAAAATCCTACATGAGTTGGT-GACAACCTTTTCAAAAGTCCACACAAGTT-GTTGAC
*
138578 AACC
125 AACA
* * * * * * * * *
138582 TTTTC-AAAGTCTACACGAGTTAGTGGCAACCTTTTCAAAACCCCATAGGAGTTAGG-GGTAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTT-GGTGGCAACA
* * * * * * * * * * * *
138645 TTTTCAAAATCCCACACGAGTTCGTAATAACCTTTTTAAAGGCCCACACGAGTTGGT-AGTAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CAACA
* * * * * * * ** *
138709 TTTTTAAAAGCCCACACGAGTTGGAGGCAAGCATTGTAAAAGT-CCACGCGAGTTGGTGGTAACA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * * * * * ** * * *
138773 TTTTC--AATGCCCAAACGAGTTGTTGTCAACCTTTTCAAAAG-CTCATAGGAGATGGTGGCAAC
65 TTTTCAAAAT-CCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGACAAC
138835 -
128 A
* * * ** * * * *
138835 TTTT-ACACAGTTCGCAC--GTT-GTGGCACAA--TAGTCAAAGT-CCATATGAGTTGGTGGCAA
1 TTTTCA-AAAGTCCACACGAGTTGGT-G-ACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA
* ** ** * *
138893 CCTTTTCAAAAATCC-ACATGAGTTATTGGTAA-CTATTTC-AAAGTCCACACGAGTTAG-TGGC
63 CATTTTC-AAAATCCTACATGAGTTGGTGACAACCT-TTTCAAAAGTCCACACAAGTT-GTTGAC
138954 AAC-
125 AACA
* * ** * * * * * *
138957 CTCTCAAAAGTCCACAAAAGTTGGTGACAATCGTTTTAAAAGCCCAAAAGGTCACACAAATTGGG
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCC---A---CA-A-GAGTTGGT
* * *
139022 GGCAAAAATTTT-AAAGTCC-ACGA-GAGTTGGT-AGCAACCTTTTCAAAAGTCTACA-AGAGTT
58 GGC-AACATTTTCAAAATCCTAC-ATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACA-AGTT
* * *
139082 GGTGGCAACC
119 GTTGACAACA
* * * * * *
139092 TTTTCAAAA-TCTCACACAAGTTGGAGGCAACCTTTTCAAAATCCCACACA-AGTTAGTAGCAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* * * ** * ** * * **
139155 -TAGTTCAAAAGCCCACACAAGTTGGGGGTAACCTTTTCAAAAGTCCACACGAGTTGATGGTAAC
64 AT-TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAAC
*
139219 C
128 A
* * * * * * * ** * ** * *
139220 TTTTC-AAAGCCCACATGAGTCGTTGGCAACATTTTCAAAAGGCCACACGAGTTTATGGCGACTT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * ** * ** * * * * *
139284 TTTAAAAAACAC-ACACAAGTTGGTGGCAACCTTTTTGAAAGCCCACACGAGTTAG-CGGCAACC
66 TTTCAAAATC-CTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTT-GTTGACAACA
* * * * *
139347 TTTTC-AAAGTCCACACGAGTTAGG-GACATCC-TTTTCAAAGCCTACATA-AGTTAG-GGCAAC
1 TTTTCAAAAGTCCACACGAGTT-GGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* ** * * * * * *
139407 CTTTTCAAAGCCCATAC--GAGTT-ATTAGTAACCTTTTC-AAAGTTCACACGAGTTGGTGGA-A
64 ATTTTCAAAATCC-TACATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTT-GTTGACA
139467 ATC-
126 A-CA
* ** * ** * * ** * ** *
139470 TTTTAAAAAACCCAAACTTGTTGGTGCCAACCTTTTCAATGT-CCACACGAGTTAATAGCAACAT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* ** * * * * * * **
139534 TTTCAAAA-GCTCACATGAGTTGGTGGTAACCTTTTTAAAGGCCCTCACGAGTTGGTGGTAACA
66 TTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * *
139597 ATTTC-AAAGTCCACAGGAGTCGAT-AGCAA-CTTTTCAAAAGCCAAAAGCCCACATGAGTTGGT
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCTTTT-------TAAAATCCCACAAGAGTTGGT
* * * * * * **
139659 GGCAACCTTTTAAAAAGT-CTACGA-GAGTTGGTCG-TAACATTTTCAAAAGCCCAAATGAGTTG
58 GGCAACATTTTCAAAA-TCCTAC-ATGAGTTGGT-GACAACCTTTTCAAAAGTCCACACAAGTTG
* *
139721 GTGACAACC
120 TTGACAACA
** ** * * * * *
139730 TTTTC-AAAGTCCACATAAGTTATTGGCAACCTTTTCAAAAGCTCACACA-AGTTGGTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
** * *
139793 TTTTCAAAATCCCGCATGAGTTGGT-AGCAACCTTTTCAAAAG-CTCACACGAGTTGGTGACAAC
65 TTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTC-CACACAAGTTGTTGACAAC
*
139856 C
128 A
* * * * * * * *
139857 TTTTC-AAAGTCCACACAAGTTGTTGGCAACATTTTTGAAAGT-CCACACGAGTTGGTGGTAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTT-AAAATCCCACAAGAGTTGGTGGCAACA
* * * * * * *
139920 TTTTC-AAAGCCTACACGAGTTGTTGGCAACCTTTTTAAAAG-CTCACACGAGTTCG-TGGCAA-
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTT-GTTGACAAC
*
139981 T
128 A
* * * ** * * *
139982 TTTTACAAAA-ACCAACATGAATTGGTGGTAACCTTTTTAAAAGCCCACAAGAGTTAGTGGTAAC
1 TTTT-CAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * * ** * ** * *
140046 CTTTACAAAGTTC-ACACGAGTTTGTGGC-ACCATAGTC-AGAGTTTACATC-AGTTGGT-AGTA
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACC-TTTTCAAAAGTCCACA-CAAGTTGTTGA-CA
*
140106 ACT
126 ACA
* * ** * *
140109 TTTTCAAAAG-CCTACAAGTGTTGGTGGTAACCTTTTCAAAAGCCCACACA-AGTTGGTGGCAAC
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAA-
* * * * * *
140172 CATTTT-AAAGTCC-ACACGAGTTGATGGCAACC-TTTCAAAAGTCTACA-AGAGTTGGTG-CAA
63 CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACA-AGTTGTTGACAA
*
140232 CC
127 CA
* * * * * ** *
140234 TTTTCAAAAGCCCACAAGAGTTAG-AAGTAA-CTATTTTAATGT-CCACACGAGTTGGTGGCAAT
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCT-TTTTAAAATCCCACAAGAGTTGGTGGCAA-
* * * ** * * * *
140296 C-TTTTGAAAAGT-CTACAAGAATTGGTGGTAACCTTTTCAAAA-ACGCACACGAGTTGGTAACA
63 CATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGACA
140358 ACCA
126 A-CA
** * * * * * * * * *
140362 TTTT--AAAGTCTGCACCAGTTGTTGGCAACCTTTTAAAAAGCTCACACGAGTTGGTGACAACTT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * ** ** *
140425 TTTCAAAAT-CTCGCACGAGTTGGTGGTAACCTTTTCAAAA-TCGCACACGTGTTGGT-AGCAAC
66 TTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGA-CAAC
*
140487 C
128 A
* * ** * *
140488 TTTTCAATAG-CCTACACGAGTTTGTGGTAACCTTTTCAAAAGT-CCACACGAGTTGGTGGCAAC
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAAC
* * * * ** * * * *
140551 CTTTT-TAAAGCCCACGCGAGTTGTTGGCAACCTTTT-AAAATGTCCACACGAGTTGGTGACAAC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAA-GTCCACACAAGTTGTTGACAAC
140614 A
128 A
** * * * *
140615 TTTTCAAAACCCCACACGGGTTGGT-AGCAACCTTTTCAAAA-CTCTACATGAGTTGGTGGCAAC
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCTTTTTAAAATC-CCACAAGAGTTGGTGGCAAC
* * * * * * * * * *
140678 AATTTCAAAGTCC-ATA-GAAGTTGATGGCAACC-TTTCAAATGTCCATA-AGAGTTGGTGGCAT
64 ATTTTCAAAATCCTACATG-AGTTGGTGACAACCTTTTCAAAAGTCCACACA-AGTTGTTGACAA
*
140739 CC
127 CA
* * * * * * *
140741 TTTTCAAAAGCCTAGAAGCCCACAAGAATTGGTGGCAACCATTTCAAAGA--CCATACA-AGTTA
1 TTTTCAAAAG--T------CCACACGAGTTGGTGACAACCTTTTTAAA-ATCCCACA-AGAGTTG
* * * * * * * * * *
140803 GTAGTAACCTTTTTAAAATTCTACAAT-AATTGG-CAGCAACCTTTTCAAAAGCCCACCCGAGTT
56 GTGGCAACATTTTCAAAATCCTAC-ATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTT
*
140866 AG-TGACAACC
119 -GTTGACAACA
** * * * * * * * * * * *
140876 TTTTC-AAAGTCTTCACAAGTTGTTGGCAACC-TTTGAAAAGCCTACATGAGTTAGTCGTAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * *
140939 TTTCAAAATGCC-ACACGAGTTAGTGGCAA-CTTTTTAAAATTCCTATACAAGTTGGT-AGCAAC
66 TTTCAAAAT-CCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGA-CAAC
*
141001 C
128 A
* * ** * * * * * *
141002 TTTTCAAAGGCCCACACGAGTTGGTGGTAACATTTTAAAAAAT-CTACACGAGTTAGTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT-TAAAATCCCACAAGAGTTGGTGGCAACA
* * * * ** * * *
141066 TTTTTAAAAGCCCACACGAGTTGGTGTTAACTTTTTCAAAA-TCGCACACGAGTTGGT-AGCAAC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGA-CAAC
*
141129 C
128 A
** * * * ** *** *
141130 TTTTCAAAAACCCATA-GAGTTGGTGACAACCTTTTCAAAGT-CCACACA-AGTTATTAAAAACT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * ** * * * * * * *
141192 TTTTCTAAAGCAAACACGTGTTGGTGAAAACCTTTTC-AAAGTCCGCACAAGTTGGT-AGTAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CAACA
* * * * * *** * ** *
141255 TTTTCAAAAGGT-GACCCGAGTTGGTGGCAA-ATTTTTCAAAATCTCACTCCAGCTCATGGCACC
1 TTTTCAAAA-GTCCACACGAGTTGGTGACAACCTTTTT-AAAATCCCACAAGAGTTGGTGGCAAC
** * * ** * * ** * * *
141318 CGTTCCAAAATCCAACATGAGTTGGT-AGCATGCTTTTC-AAAGGCCTTCATTACTTAGTAG-TA
64 ATTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCC-ACACAAGTT-GTTGACA
*
141380 ACC
126 ACA
* * * * * ** * * * * *
141383 TTTTTAAAA-CCCATAAGAGTTGGTGGCAACCTTTGCAAAAGT-CCATATGAATTTGTGGTAACA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * * * * * * * * * ** ** * *
141446 TTTTC-AAAGCCCAAACGAGTCGTTGGCAATCTTTTCAAGAGCCCACAGGAGTTGGGGGCAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * ** * * *
141509 TTTAC-AATGTTCACATGAGTTTGTGGCACCATAGTCAAAGCCCACATAGTCAAAGCCCACATGA
1 TTTTCAAAAGTCCACACGAG--T-TGG-----T-GAC-AA---C-CTTTTTAAAATCCCACAAGA
* ** ** ** *
141573 GTTGGTGGCAACCTTTTCAAAAATCC-ACACAAGTTATTGGGAA-CTATTTC-AAAGTCCACACG
52 GTTGGTGGCAACATTTTC-AAAATCCTACATGAGTTGGTGACAACCT-TTTCAAAAGTCCACACA
* *
141635 AGTTGATGGCAAC-
115 AGTTGTTGACAACA
* * * ** * *
141648 CTTTCAAAATTCCACAAGAGTTGGTGGTAA-CTATTTTAAAAGCCCAAAAGGTCACACGAATTGG
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCT-TTTTAAAATCCC---A---CA-A-GAGTTGG
* * *** ** * * * *
141712 TGGCAAAAATTT-ATTGTCC-ACGCGAGTTGGTGGCAACCTTTTAAAAAGTCTACA-AGAGTTGG
57 TGGCAACATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACA-AGTTGT
** *
141774 TGGTAACC
121 TGACAACA
* * * * * * ** *
141782 TTTTCAAAAG-CC-CA--TGTTGGTAACAACCTTTTCATAGTCTGCAC-A-AGTTATTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATC-CCACAAGAGTTGGTGGCAACA
* * * * * * * **
141841 TTTTCAAAAGCCCACA-GAGTTGCTGACAA-CTTTATTAAAA-TCTCGCACGAGTTGGTGGTAAC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTT-TCAAAAGTC-CACACAAGTTGTTGACAAC
*
141903 C
128 A
* * * * * ** * * * *
141904 TTTTCAAAA-TCTCACATGTGTTGGT-AGCTACATTTTTGAAGGCCTACACGAGTTTGTGGTAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * *
141967 CTTTTCAAAAGTCCATAC--GAGTTGGTGGCAACCTTTTC-AAAGCCCACGCGAGTTGTTGGCAA
64 ATTTTCAAAA-TCC-TACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA
*
142029 CC
127 CA
* * * * * ** * ** *
142031 TTTTAAAAAGTCCACATGAGTTGGCGATAACATTTTCCAAAGCCCACTTGAGTTGGTAGCAA-AC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA-
* * * * ** * ** * *
142095 TTTTCAAAA--GTAGGCACGAGTTGGTCG-CAGCTTTTTTTAAAGCCCACATGAGTTGATGTCAA
65 TTTTCAAAATCCTA--CATGAGTTGGT-GACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA
*
142157 CT
127 CA
* * ** * *
142159 TTTTC-AAAGTCTACATGAGAAGGTGGCAACCTTTTCAAAAGTCCAAAAGCCCACACA-AGTTGG
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT------T--AAAATCCCACA-AGAGTTGG
* * * * * * * * * *
142222 AGGCAACCA-TTTCAGAGT-TTGCATGAGTTGGTGGCAACATTTTCAAAACTCTACGA-GAGTTG
57 TGGCAA-CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCAC-ACAAGTT-
* * *
142284 GTCG-TAACC
119 GTTGACAACA
* * * * * *
142293 TTTTCAAAAGCCCACACAAGTTGGTGGCAA-CTTTTTCAAAGT-CTACATA-AGTTGTTGGCAAC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTT-AAAATCCCACA-AGAGTTGGTGGCAAC
* * ** * * * * * ***
142355 CTTTTCAAAA-GCTCACACAAATTGATGACAACATTTTCAAAA-TCCTGCATAAGTTGGCAACAA
64 ATTTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGACAA
*
142418 CC
127 CA
* * * * * * *
142420 TTTTCAAAAG-CTAACATGAGTTGGTGACAACCATTTCAAAGT-GCACACA-AGTTGTTGGCAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* * ** * *
142482 ATTTTCAAAAGTTC-ACACGAGTTGGTGGTAACCTTTTC-AAAG-CCTACACGAGTTGTTGGCAA
64 ATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGACAA
142544 CA
127 CA
* * ** * * * *
142546 TTTTTAAAAG-CTCACACGAGTTGATGGTAA-CTTTTACAAAAACCCACACGAGTTAGTGGCAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTT-TAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * * * ** ** **
142609 CTTTTGAAAAGCC-ACACGAGTTAGTGATAACTTTTTCAAAA-TCCGGCATGAGTTGGGGGTAAC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGACAAC
*
142672 C
128 A
* * * ** * * *
142673 TTTTGAAAA-TCCCACACGTGTTGGT-AGCAACCTTTTCAAAGGCCTACACA-AGTTTGTGGTAA
1 TTTTCAAAAGT-CCACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAA
** * ** *
142735 C-TTATTCAAAAGTCC-ACACAAGTTGCT-AGCAACCTTTTC-AAAG-CCTATGCGAGTTGTTAG
63 CATT-TTCAAAA-TCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCC-ACACAAGTTGTT-G
*
142795 A-AACC
123 ACAACA
* ** * * * *
142800 TTTTAAAAAGTCCACACGAGTTGGTGGTAA-CTTTTTCAAAAACCCACACGAGTTGGTAGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTT-AAAATCCCACAAGAGTTGGTGGCAACA
** * * * * *
142864 TTTTCAAAA-CTCTACATGAGTTGGTGGTAA-CTATTT-TAAAGTCTATA-AGAGTTGATGCCAA
65 TTTTCAAAATC-CTACATGAGTTGGTGACAACCT-TTTCAAAAGTCCACACA-AGTTGTTGACAA
142925 C-
127 CA
* * * * * * * *
142926 CTTTCAAAAGTCTACAAGAGTTGGTGGCAACCTTTTCAAAAGCCTAAAAGCTCACACGAATTGGT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT--------TAAAATCCCACAAGAGTTGGT
* * * * * * *
142991 GGCAACCA-TTTCAAAGTCC-ACACGAGTTAGTGATAACCTTTTTAAAATTCTACA-ATAGTTGT
58 GGCAA-CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACA-AGTTGT
* *
143053 TGGCAACC
121 TGACAACA
* ** * * * *
143061 TTTTCAAAAG-CGCACCCGAGTTGGTGGTAACCTTTTCAAAGT-CTACATA-AGTTGTTGGCAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* * * * * * * * *
143123 CTTTTCAAAAGCCCAAACGAGTTGGTGATAACCTTTTCAAAA-TCCCACACGAGTTGGTGGCAAC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGT-CCACACAAGTTGTTGACAAC
*
143187 C
128 A
* * ** *
143188 TTTT-AAAA-TCCTACCCGAGTTGGT-AGCAA-CTATTTCAAAGGCCCA-AACGAGTTGGTGGTA
1 TTTTCAAAAGTCC-ACACGAGTTGGTGA-CAACCT-TTTTAAAATCCCACAA-GAGTTGGTGGCA
* * * * ** * **
143248 ACATTTTCAAAAATCC-ACACGAGTTGGTGGCAACCTTTTTAAAAGCCCACATGAGTTGGTGGTA
62 ACATTTTC-AAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACA
*
143312 ACC
126 ACA
* * * * * * * *
143315 TTTTC-AAAGTTCACATGAGTTTGTGGCACCATAGTCAAAGTCTAACATTTTCAGAAGCTCGCAT
1 TTTTCAAAAGTCCACACGAGTTGGT-G-A-CA-A--C-----CT----TTTT-AAAATCCCACAA
* * * * ** * **
143379 TAGTTGGTGGCAACCTTTTCAAAGT-CTATAAAAGTTGGTGGC-ACCATAGTC-AAAGTCCACAC
50 GAGTTGGTGGCAACATTTTCAAAATCCTACATGAGTTGGTGACAACC-TTTTCAAAAGTCCACAC
* *
143441 GAGTTAG-TGGCAACA
114 AAGTT-GTTGACAACA
* * * * * * * * * * *
143456 TTTTCAAAAGCCCACATGAGTTGATGAGAACCATTTCAAAAGCCCATACGAGTTGGTAGCAGTC-
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCA-ACA
* * * * *** * * * *
143520 TTATT-TAAAGCCCACATGCA-TTGATGGTGACCTTTTC-AAAGTCCATACATGTTGGTGGCAAC
65 TT-TTCAAAATCCTACATG-AGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAAC
143582 A
128 A
* * * ** * * * * * *
143583 TTTTCAAAAGCCCACGCGAGTTAGAAAAAACCTTTTCAAAGT-CAACATA-AGTTGCTAGCAATC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAA-C
* * * * * * * *
143646 -TTTTCAAAA-GCTCACAGGATTTGTTGGCAACCTTTTCAAAA-TCATACACGAGTTAGTAG-CA
64 ATTTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTT-GTTGACA
143707 ATC-
126 A-CA
** * * * * * * *
143710 TTTTCAAAAACCCACA-GTGTTGGTGAGAACCTTTTCAAAGT-CCACACA-AGTTGTTGGAAACT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * * * * ** *
143772 TTTTCAAAAGCCCACACGGGTTGGTGACAACGTTTTCAAAA-TCCACACAAGTTGTTGGTAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * *
143835 TTTTCAAAAG-CCTACACGAGTTGGTGGCAACCCTTTTAAAATCCCACTAGAGTTGGT--AATAC
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCA-AC
* * * * * * * * * *
143897 CTTTTCAAAATCCCACACGAGTTGGTAAAAACCATTTCTAAGGCCCACACGAGTTGGTGGTGAC-
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTT-GT--TGACA
*
143961 -CC
126 ACA
* * * * ** * * *
143963 TTTT-AAAGGGCCACACGAGTTGGTGGCACCCTTTGCAAAAGT-CCACACGAGTTGGTGACAAGA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* ** * * * *
144026 TTTTC-AAAGCCTA-AACACGTTGTTGGCAACTTTTTCAAAAG-CC-CACTAGAGTTGTTGGCAA
65 TTTTCAAAATCCTACATGA-GTTGGTGACAACCTTTTCAAAAGTCCACAC-A-AGTTGTTGACAA
*
144087 CC
127 CA
* * * ** * ** * * * *
144089 TTTAC-AAAGTTCACATGAGTTTATGGC-ACCATAGTCAAAAT-CCACACGAGTTGG-GTGTAAT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC-TTTTTAAAATCCCACAAGAGTTGGTG-GCAAC
* * * * ** * * * *
144150 ATTTTCAAAAGCCGACACGAGTTGCTGGTAACCTTTT-TAAAGTCTATACAAGTTG--GCAGCAC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTG-A-CAA
144212 CA
127 CA
*** * **** * * *
144214 CAATC-AAAGTCCACACGAGTTGGTGGCAACAAAGTCAAAGT-CCACACA-AGTTGGCGGCAACA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * * * *
144276 TTTTCCAAAGCCCACATGAGTTGGT-AGCAACCTTTTCAAAAG-CAGACACGAGTTG--GACGCA
65 TTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTC-CACACAAGTTGTTGA--CA
* *
144337 GCT
126 ACA
*** * * * * * * * * * *
144340 TTTTTTTAAGCCCACACGAGTTGATGTCAATC-TTTTCAAAGCACACACGAGATGGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-CA
* * ** * * * *** * *
144404 TTTCAAAGGTCTAAAAGCCCACACAAGTTGGAGATAACCATTTC-AAAGTTTGCACGAGTTGGTG
65 TTT------TC-AAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTG
* *
144468 GCAATA
123 ACAACA
* * * * *
144474 TGTTCAAAAGTCTACGA-GAGTTGGTCG-CAACCTTTTCAAAAGCCCA-AACGAGTTGGTGACAA
1 TTTTCAAAAGTCCAC-ACGAGTTGGT-GACAACCTTTTTAAAATCCCACAA-GAGTTGGTGGCAA
* * * ** * * *
144536 CTTTTTCAAAGTCC-AC-TAAGTTATTGGCAACCTTTTCAAAAG-CTCACA-AAGTTGGTGGCAA
63 CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGACAA
*
144597 CC
127 CA
* * * * * * *
144599 CTTTCAAAA-TCTCACATGAGTTGGT-AGCAACCTTTTTGAAAGCTCACACGAGTTGGTGACAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * ** * * * * * * *
144662 CTTTTCAAAGTCC-ACACAAGTTGTTGGCAACATTTTCAAAAGTCCACACGAGTTGGTGGCAACC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * *
144726 TTTTC-AAAG-CCTACACAAGTT-GTTAGCAACCTTTTTAAAAGCTCTCATGAGTTGGTGGTAAC
1 TTTTCAAAAGTCC-ACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * ** *
144788 -TTTTACAAAAACCCACACGAGTTGGTGGCAACCTTTTC-AAAGTTCACACGAGTT-TATGGTAC
64 ATTTT-CAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGT-TGACAA
144850 CA
127 CA
** * * * * ** * * * * *
144852 TAGTC-AAAGTCTACACGAGTTGGTAATAATCTTTCCAAAAGCCTACACGTGTTGGTGGTAACCA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-CA
* * * * * * * *
144916 -TTTCAAAAGCCCACACGAATTGGTGGCAACCATTTCAAAAGT-----C---TTGATGGCAAC-
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* ** * ** * * * *
144970 CTTTCAAAAGTATACAAGAGTCAGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT--------TAAAATCCCACAAGAGTTGGT
* * * * * *
145035 AGTAAC-TATTTCAAAATGC-ACATGAGTTGGCGGCAACC-TTTCGAAAAGTCTACA-AGAGTTG
58 GGCAACAT-TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTC-AAAAGTCCACACA-AGTTG
* ** *
145096 GTGGTAACC
120 TTGACAACA
* * * * * * * * *
145105 CTTTCCAAAGGCCACACGAGTTGGTAACAACCTTTTCAAAGT-CTACACA-AGTTGTTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * * * * * **
145168 TTTTGAGAAGCCCACATGAGTTGGTGACAA-CTTTGTCAAAA-TCCCACACGAGTTGGTGGTAAC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTT-TCAAAAGT-CCACACAAGTTGTTGACAAC
*
145231 C
128 A
* ** * * *
145232 TTTTCAAAA-TCCCACACGTA-TTGGT-AGCTA-CTTTTTCAAAGGCCTACACGAGCTT-GTGGT
1 TTTTCAAAAGT-CCACACG-AGTTGGTGA-CAACCTTTTT-AAAATCCCACAAGAG-TTGGTGGC
* * * * * ** *
145292 AACCTTTTCAATAGTCCGCACA--AGTTGGTGGCAATCTTTTC-AAAG-CCGATGCGAGTTGTT-
61 AACATTTTCAA-AATCC-TACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTG
* *
145352 AGCCACC
123 A-CAACA
* * * ** * * * *
145359 TTTTAAAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * ** * * * * * *
145424 TTTAAAAATCTTATACCAGTTGGT-AGCAACCTTTTTAGAAGGT-CACACTAGTTGGTGGCAACC
66 TTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCA-AAAGTCCACACAAGTTGTTGACAACA
* * ** * ** * * * *
145487 TTTTC-AAAGTCTATAAAAGTTGGTGGC-ACCATAGTCAAAGT-CCACACGAGTTAGTGGCAACA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC-TTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * * * * * *
145549 TTTTCAAAAGCCCACATGAGTTGAT-AGGAA-TTATTTCAAAAGCCCACACGAGTTGGT-AGCAG
65 TTTTCAAAATCCTACATGAGTTGGTGA-CAACCT-TTTCAAAAGTCCACACAAGTTGTTGA-CAA
*
145611 CC
127 CA
* * * * * * * * * *
145613 TTATT-TAAAGTCCACACGCGTTGATGGCAACCTTTTCAAAGT-CCACATGTGTTAGTGGC-ACC
1 TT-TTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * ** * * *
145675 CTTTCAAAAGCCTAAAAGCCCATAAGATTTTGTGGTAACCTTTTCAAAAGTCTACGA-GAGTTGG
65 TTTTCAAAATCCT---A---CAT--GAGTTGGTGACAACCTTTTCAAAAGTCCAC-ACAAGTTGT
* *
145739 TGGCAACC
121 TGACAACA
* *** * * * * * * * * * *
145747 TTTTCAAAAGCCCATGTGAGCTAGTAACAACATTTTCAAAGT-CAATATA-AGTTGTTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * ** **
145810 TTTTCAAAATCCCACACT-AGTTGGTGGCAACCTTTTCAAAA-TCGCACATGAGTTACT-AGCAA
65 TTTTCAAAATCCTACA-TGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGA-CAA
145872 TC-
127 -CA
** * * * ** * *
145874 TTTTCAAAAACCCACA-GTGTTGGTGACAACCTTTTCAAAGT-CCACACA-AGTTATTGGAAACT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * * * * *
145936 TTTTCAAAAGCCATAC--GGGTTGGTGAAAACCTTTTCAAAA-TCCACAAAAGTTGTTGGCAACC
65 TTTTCAAAATCC-TACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * ** ** *
145998 TTTTCAAAAG-CCTACACAAGTTGGTGGCAACCTTTTTAAAATCCCACTCGAGTTGGTAACACCA
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * * * **
146062 -TTTCAAAAT-CTCACATGAGTTGGTAACAACCTTTTCTAAGGCCCACACGAGTTGGTGGTAATC
65 TTTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA-C
146125 -
128 A
* * * ** * ** * * *
146125 TTTTCAATAG-CATACACAAGTTGGTGGTACCCTTTGCAAAAGT-CCACACGAGTTGGTGGTAAG
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAAC
* ** * * * * * * * *
146188 ATTTTTAAAGCCCAAACA--CGTTGTTGGCAACTTTTTCAAAAGTCCACACGAGTTGGTGGCAAC
64 ATTTTCAAAATCC-TACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAAC
*
146251 C
128 A
* * ** * ** * * * * *
146252 TTTAC-AAAGTTCACACGAGTTTATGGC-ACCATAGTCAAAGT-CCACACGAGTTGG-GTGTAAT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC-TTTTTAAAATCCCACAAGAGTTGGTG-GCAAC
* ** * * ** * * * * * *
146313 ATTTTCAAAAGCCGGCACGAGTTGCTGGTAACATTTT-TAAAGTCTATACAAGTTAG-TGGCACC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTT-GTTGACAAC
146376 A
128 A
** * * * * **** * * *
146377 TAGTC-ATAGTACACACGAATTGGTGGCAACAAAGTCAAAGT-CCACACGAGTTGGTGGCAACAT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * *
146440 TTTCAAAAGCCCACATAAGTTGGT-AGCAACCTTTTCAAAAG-CAAACACGAGTTGGTCG-CAGC
66 TTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTC-CACACAAGTT-GTTGACAAC
*
146502 T
128 A
** * * * * * * *
146503 TTTTTTAAAGCCCACACGAGTTGATGTCAATC-TTTTCAAAGCCCACACA-AGTTGGAGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAA-C
* * * * * * * * * *
146566 A-TTTCAAAGT-TTGCACGAGTTGGTGGCAACATGTTCAAAAGTCTACGA-GAGTTGGTCG-CAA
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCAC-ACAAGTT-GTTGACAA
*
146627 CC
127 CA
* * * * * ** *
146629 TTTTCAAAAGCCCAAATGAGTTGGTGACAA-CTTTTTCAAAGT-CCACTA-AGTTATTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTT-AAAATCCCACAAGAGTTGGTGGCAACA
* * * * *
146691 TTTTCAAAA-GCTCACA-AAGTTGGTGGCAACCCTTTCAAAA-TCC-CACATGAGTTGGT-AGCA
65 TTTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACA--AGTTGTTGA-CA
*
146751 ACC
126 ACA
** * * *
146754 TTTTTGAAAG-CTCACACGAGTTGGTGACAACCTTTTCAAAGT-CCACACA-AGTTGTTGGCAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* * *
146816 ATTTTCAAAAGTCC-ACACGAGTTGGTGGCAACCTTTTC--AAGGCCTACACAAGTTGTT-AGCA
64 ATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGA-CA
*
146877 ACG
126 ACA
* * * ** * * * *
146880 TTTTTAAAAG-CTCTCATGAGTTGGTGGTAA-CTTTTACAAAAACCCACACGAGTTGGTGGTAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTT-TAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * ** * ** ** *
146943 CTTTTTAAAAGCCCATACGAGTTGGTGGTAACCTTTTC-AAAGTTCACATGAGTT-TATGGTACC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGT-TGACAAC
147006 A
128 A
** * * * * ** * * * * *
147007 TAGTC-AAAGTCTACACGAGTTGGTAATAATCTTTCCAAAAGCCTACACGTGTTGGTGGTAACCA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-CA
* * * * * * * *
147071 -TTTCAAAAGCCCACACGAGTTAGTGGCAACCATTTCAAAAGT-----C---TTGATGGCAAC-
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * *
147125 CTTTCAAAAGTCTACAAGAGTCGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT--------TAAAATCCCACAAGAGTTGGT
* * * * * ** *
147190 AGTAAC-TATTTCAATATGC-ATATGAGTT-GCCAGCAACC-TTTCGAAAAGTCTACA-AGAGTT
58 GGCAACAT-TTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTC-AAAAGTCCACACA-AGTT
* ** *
147250 GGTGGTAACCC
119 GTTGACAA-CA
* * * * * ** *
147261 TTTTC-AAAGGCCACACGAGTTGGTAACAACCTTTTCAAAGT-CTACACA-AGTTTTTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * * * * * * *
147323 TTTTGAGAAGCCCACATGAGTTGGTGAC-ACCTTTGTCAAAA-TCCTGCACGAGTTGGT-AGTAA
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTT-TCAAAAGTCC-ACACAAGTTGTTGA-CAA
*
147385 CC
127 CA
* * * ** * * * *
147387 TTTTCAAAA-TCCCACAC-ATATTGGT-AGCTACCTTTTCAAAGGCCTACACGAGTTTGTGGTAA
1 TTTTCAAAAGT-CCACACGA-GTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA
* * ** * * ****
147449 CCTTTTCAAAAGTCCGCACA--AGTTGGTGGTAATCTTTTC-AAAGCCCATGTGAGTTGTT-AGC
63 CATTTTCAAAA-TCC-TACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-C
147510 AATC-
125 AA-CA
* * * * * * *
147514 TTTTAAAAAGCCCACACGAGTTGGTGATAACCTTTTTAAAAACCCACACGAGTTGGGGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * * **
147579 TTTCAAAATCCTATACGAGTTGGT-AGCAACCTTTTCAAAGGCCCATACGAGTTGGTGGTAACA
66 TTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * * *
147642 TTTTCAAAAATTCGCACGAGTTTGTGGCAACCTTTTT-AAATGCCCACATGAGTTTGTGGTAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAAT-CCCACAAGAGTTGGTGGCAACA
* * * * * * * *
147706 TTTTCAAAGTTC-ACAGGAGTTTGTGGC-A-C----C-ATAGT-----C-AG-AG-T-CCAACA
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * *
147753 TTTTCAAAACGT-CACACAAGTTGGTGGCAACCTTTTCAAAGT-CTATAAAAGTTGGTGGCACCA
1 TTTTCAAAA-GTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
** * * * * * * ** ** *
147816 TAGTCAAAGTCC-ACACGAGTTAGTGGCAACATTTTCAAAAGCCCACATTAGTTAAT-AGGAAC-
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CAACA
* * * * * * *
147878 TATTTCAAAAGCCCACACGAGTTGGT-AGCAGCCTTATTTAAAGT-CCACACGCGTTGATGGAAA
1 T-TTTCAAAAGTCCACACGAGTTGGTGA-CAACCTT-TTTAAAATCCCACAAGAGTTGGTGGCAA
* * * * * * * * *
147941 CCTTTTCAAAGTCC-ACATGTGTTAGTGGCAACCCTTTCAAAAGCCCAAAAGCCCATAAGATTTT
63 CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC---A---CACAAG-TTGT
** *
148005 GTGGTAACC
121 -TGACAACA
* * * * *** * * **
148014 TTTTCAAAAGTCTACGA-GAGTTGGTGGCAACCTTTTCAAAAGCCCATGCGAGCTAGTAACAACA
1 TTTTCAAAAGTCCAC-ACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * * * * * * *
148078 TTTTCAAAGT-CAACATAAGTTGTTGGCAACTTTTTCAAAAGCCCACACTAGTT-TGTGGCAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGT-TGACAACA
* * * * * * *
148141 TTTTCAAAA-TCGCACATGAGTTAGT-AGCAATCTTTTCAAAAACCCAC-AGTGTTGGTGACAAC
1 TTTTCAAAAGTC-CACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* ** ** ** * * ** * *
148203 CTTTTCAATGTCC-ACACAAGTTATTGGA-AACTTTTTCAAAAGCCCACACGGGTTGGTGAAAAC
64 ATTTTCAAAATCCTACATGAGTTGGT-GACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAAC
*
148266 C
128 A
* * * * * *
148267 TTTTCAAAA-TCCACACAAGTTGTTGGCAACCTTTTCAAAAGCCTACACA-AGTTGGTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAA-C
* * * * *
148330 CTTTT-AAAATCCTAC-TCGAGTTGGTAAC-ACCATTTCAAAA-TCTCACATC-AGTTGGTAACA
64 ATTTTCAAAATCCTACAT-GAGTTGGTGACAACCTTTTCAAAAGTC-CACA-CAAGTTGTTGACA
*
148390 ACC
126 ACA
* * * ** * * * * ** * * * *
148393 TTTTCTAAGGCCCACACGAGTTGGTGGTAATCTTTTCAATAGCATACACGAGTTGGTGGTACCCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * ** * * * * * *
148458 TTGCAAAAGTCC-ACACGAGTTGGTGGCAAGATTTT-TAAAGCCCAAACACGTTATTGGA-AACT
66 TTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTT-GACAACA
* * ** * * *
148520 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTACAAAGT-TCA-AATGAGGTT-GTGGCACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAA-GA-GTTGGTGGCAAC
*** * * * ** * * * *
148582 ACAGTCAAAGT-CTACACGAGTTGGGTG-TAATATTTTCAAAAGCCCACACGAGTTGCT-AGTAA
64 ATTTTCAAAATCCTACATGAGTT-GGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CAA
*
148644 CC
127 CA
* ** ** * * * ** * * *
148646 TTTT-TAAAGTTTATGCAAGTTGGCGGC-ACCATAGTCAAAGT-CCACACG-GATTGGTGGCAAC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC-TTTTTAAAATCCCACAAGAG-TTGGTGGCAAC
*** * * * * * * *
148707 AAAGTCAAAGTCC-ACACGAGTTGGTGGCAACATTTTCAAAAGCCCACATAAGTTGGT-AGCAAC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGA-CAAC
*
148770 C
128 A
* * * * * * * * **
148771 TTTTCAAAAG-CAAACACGAGTTGGTTG--TAGCTTTTTTAAAGCCTACACGAGTTGATATCAAT
1 TTTTCAAAAGTC-CACACGAGTTGG-TGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-
* * * * *
148833 C-TTTTCAAAGTTC-ACACGAGATT-GTGGCAACCTTTTCAAAGGTCCAAAAGCCCACACAAGTT
63 CATTTTCAAAATCCTACATGAG-TTGGTGACAACC-TTT------T-CAAAAGTCCACACAAGTT
** *
148895 GGAGGCAATCA
119 GTTGACAA-CA
*** * * * ** * * * ** *
148906 -TTTC-AAAGTTTGCACAAGTTGATGGCAATATTTTCAAAAGT-CTACGAGAGTTGGTCACAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * * * ** *
148968 GTTTCAAAA-GCTCACATGAGTTGGTGGCAACCTTTTCGAAA-TCCTACATGAGTTGGT-AGCAA
65 TTTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGA-CAA
*
149030 CC
127 CA
* * * * * * *
149032 TTTTCAAAAG-CTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * *
149096 TTTCCAAAA-GCTCACACGAGTTGGTGACAACCTTTTC-AAAGTCCACACAAGTTGTTGGCAATA
65 TTTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * *
149159 TTTTCAAAAGTCTATAAGAGTTTGTGGCAACCTTTTCAAATGCTTAAAAGCCCACAAGAGTTGGA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC--TT----T--TTAAAATCCCACAAGAGTTGGT
* ** ** ** * *
149224 AGCAACTATTTT-AATGTCCATAC--GAGTTGGTGGTAATATTTTGAAAAGTCTACA-AGAGTTG
58 GGCAAC-ATTTTCAAAATCC-TACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACA-AGTTG
* ** *
149285 GTGGTAACC
120 TTGACAACA
* * * * * * * * *
149294 TTTTCAAAAG-CTTACACGAGTTGGTAATAACCTTTTCAAAGTCTGCAC-A-AGTTGTTAGCAAT
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATC-CCACAAGAGTTGGTGGCAAC
* * * * * * * * * * **
149356 TTTTTCGAAAGCCCACTTGAGTTGGTAATAACTTTTTCAAAA-TCCCGCACGAGTTAG-TGGTAA
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGT-CCACACAAGTT-GTTGACAA
*
149419 CC
127 CA
* * * ** * * * * *
149421 TTTTCAAAA-TCCCGCACGTGTTGGT-AGCAACCTTTTCAAAGGCCTACATGAGTTTGTCGTAAC
1 TTTTCAAAAGT-CCACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * *** *
149484 CTTTTCAAAAGT-CGACACGAGTTGGTGGCAACCTTTTC-AAAGCCCACGTGAGTTGTTGGCAAC
64 ATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA-
149547 CA
127 CA
* * * * * * * * *
149549 -TTTAAAAAGTCCACACAAGTTAGTGGCAACCTTTTCAAAAACCCACACGAGTTGGTAGCAACTT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * *
149613 TTTCAAAA-CTCTACACGAGTTGGTGGCAA-CTATTTC-AAAGTCCATAGGAA-TTGATGGCAAC
66 TTTCAAAATC-CTACATGAGTTGGTGACAACCT-TTTCAAAAGTCCACA-CAAGTTGTTGACAAC
149674 -
128 A
* * * * * *
149674 CTTTCAAAAGTCCACAAGAGTTGGTGGCAACCTTTTCAAAAGCCTAAAAGCCCACACGAATTGGT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT--------TAAAATCCCACAAGAGTTGGT
* * * * ** * * * * *
149739 GGTAACCA-TTTCAAAGTCC-ACACGAGTTAGTGGTAACCTTTTTAAAATTCTATA-ATAGTTGG
58 GGCAA-CATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACA-AGTTGT
* *
149801 TGCCAACC
121 TGACAACA
* * * * * * *
149809 TTTTCAAAAGCCCACCCGAGTTAGTGATAACCTTTTCAAAAT-CCACACA-AGTTGTTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * * * ** * * * ** *
149872 TTTTCACAAGCCCACACGAGTTGGTGGTAACCTTTTCAAAA-TCCCACTCGAGTTGGTGGGAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGT-CCACACAAGTTGTTGACAACA
* * * * ** ** * * *
149936 TTTTCAAAA-TCCTACATGAGTTAGT-AGCAACATTTTCAAAGGCTTACACGAGTTGGTGGTAAT
1 TTTTCAAAAGTCC-ACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * *
149999 ATTTTTAAAAAT-ATACATGAGTTAGTGGCAACATTTTTAAAAG-CCA-ACATGAGTTGCT-AGC
64 A-TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACA--AGTTGTTGA-C
*
150060 AACC
125 AACA
* * ** ** * *
150064 TTTTCAAAGGCCCACACGAGTTGGTGGTAATATTTTCAAAAAT-CTACATA-AGTTGGTGGCAAC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTT-TAAAATCCCACA-AGAGTTGGTGGCAAC
* * ** * *
150127 TATTTT-AAAAGCCCACATGAGTTGGTGGTAACCTTTTC-AAAGTTCACACGAGTTTTTAGCACC
64 -ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAG---TT-G----
*
150190 ATAGTCAAAGTCTAACA
120 -T--T----GAC-AACA
* ** * * * * * * *
150207 TTTTCAGAAG-CTCACATTAGTTGGTGGCAACCTTTTCAAAGT-CTATAAAAGTTGGTGGCACCA
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
** * * * ** * * * ** * **
150270 TAGTCAAAGTCC-ACACGAGTTCGTGGTAACATTTTCAAATGCCCACATGAGTTGATGGGAACCA
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA-CA
* * * * * * * *
150334 -TTTCAAAAGCCCACGCGAGTTGGT-AGCAGCCTTATCT-AAAGCCCACACGCA-TTGATTGCAA
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCTT-TTTAAAATCCCACAAG-AGTTGGTGGCAA
* * * * *
150395 CATTTTCAAAGTCC-ACA-CATGTTGGTGGCAACCTTTTCAAAAGCCCAAAAATCCATACGAATT
63 CATTTTCAAAATCCTACATGA-GTTGGTGACAACCTTTTCAAAAGTCC--ACA--CA-A-G--TT
* ** *
150458 GGTGGTAACC
119 GTTGACAACA
** * * * ** * ***
150468 TTTTCAAAAGTCTGCGA-GAGTTGGTGGCAACCTTTTCAAAAGT-CTACGCGAGTTAGTAATAAC
1 TTTTCAAAAGTCCAC-ACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAAC
* * * * * * * * * * * * *
150531 CTTTTCGAAGT-CAACATAAGTTGTTGGCAACATTTTCAAAAGCCCACACGAGTTGGTGGCAACC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * ** * * *
150595 TTTTCAAAA-TCGCACATGAGTTGGTGGCAATCTTTTAAAAAACATAC-AGTGTTGGTGACAACC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* ** * * * * * ** * * *
150658 TTTTCAAAGTCC-ACACAAGTTGTTGGA-AACTTTTTCAAATGCCCAGACGGGTTGGTAACAACC
65 TTTTCAAAATCCTACATGAGTTGGT-GACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * *
150721 TTTTCAAAA-TCCACACAAGTTGTTGGCAACCTTTTCAAAAGCCCA-AACGAGTTAGTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAA-GAGTTGGTGGCAA-C
* * * * * * * *
150784 CTTTT-AAAGTCCCAC-TCAAGTTGGTAAC-A-CTATTTCAAAA-TCCCACACGAGTTGGTAACA
64 ATTTTCAAAATCCTACAT-GAGTTGGTGACAACCT-TTTCAAAAGT-CCACACAAGTTGTTGACA
*
150844 ACC
126 ACA
* * ** * * * * * * *
150847 TTTTC-CAAGGCCGACACGAGTTGGTGGTAACCTTTTCAAAAGCACACACGAGTTGTTGGCACCC
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * ** * * * * *
150911 TTTACAAAAATCC-ACATGAATTGGTGGCAAGATTTTC-AAAGCCCAAACAAGTTTTTGGCAACC
65 TTTTC-AAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * ** * ** ** *
150974 TTTTCAAAAGCCCACAGGAGTTGGTGGCAACCTTTACAAAGT-TTACACA-AGTTTATGGCACCA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
** * * * ** * * *
151037 TAGTCAAAGTCC-ACACGAGTTGGGTG-TAATATTTTCAAAAG-CTGACACGAGTTGCTGGA-AA
65 TTTTCAAAATCCTACATGAGTT-GGTGACAACCTTTTCAAAAGTC-CACACAAGTTG-TTGACAA
151098 C-
127 CA
** * * * * * ** * * * *
151099 TTTTTTAAAGTCTATACAAGTTAGTGGC-ACCATAGTCAAAGT-ACACACGAGTTGGTGGCAACA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC-TTTTTAAAATCCCACAAGAGTTGGTGGCAACA
*** * * * **** * * *
151162 AAGTCAAAGTCC-ACACGAGTTGGTGGCAACAAAGTC-AAAGTCCACACGAGTTGGTGGCAACA
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* ** * * * * * *
151224 TTTTCAAAAGCCCACATAAGTTGGT-AGCAACC--TTTACAAATGCAAAAACGAATTGGTCGCAG
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCTTTTTA-AAATCCCACAA-GAGTTGGTGGCAA
* * * * * ** * * *
151286 CTTTTTTTAAAGA-CC-ATATGAGTTGCTGTCAACCTTTTC-AAAGTCCACATGAGATGGTGGCA
63 C-ATTTTCAAA-ATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACA
*
151348 ACC
126 ACA
** * * * ** **
151351 TTTTCAAAAGTCCAAAAGCCCACAGAAGTTGCAGGCAACCATTTCATAGTTTGCAC--GAGTTGG
1 TTTTCAAAAGTCC---A---CAC-G-AGTTGGTGACAACCTTTTTA-AAATCCCACAAGAGTTGG
** * * *
151414 TGATAACATTTTCAAAAGT-CTACGA-GAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTG
57 TGGCAACATTTTCAAAA-TCCTAC-ATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTG
* *
151477 GTGACAACC
120 TTGACAACA
** * * * * * * * *
151486 TTTTC-AAAGTCCACATAAATTGTTGGCAACCTTTTCAAAAGCTCACACA-AGTTGGTGACAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAACA
* * * * * * *
151549 TTTTCAAAATCCCATATGAGTTGGT-AGCAACATTTTCCAAAG-CTCACATAAGTTGGTAACAAC
65 TTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTC-CACACAAGTTGTTGACAAC
*
151612 C
128 A
* * * * * * * *
151613 TTTTC-AAAGTCCACACAAGTTGTTGGCAACATTTTCAAAAGT-TCACACGAGTTGGTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * * * * * * **
151676 TTTTC-AAATCCTACACGAGTTGTTGGCAACGTTTTTAAAAG-CTCACACGAGTTGATGGTAAC-
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTC-CACACAAGTTGTTGACAACA
** * * ** *
151738 TTTTACAAAA-TCCCACACGAGTTGGTGGTAACCATTTTAAAAGCCCACGCGAGTTGGTGGTAAC
1 TTTT-CAAAAGT-CCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * * * * * * *
151802 CTTTTC-AAA-GCTCACACGAGTTTGTGGC-A-CTATAGTC-AAAGTCTACATGAA-TTGGT-AG
64 ATTTTCAAAATCCT-ACATGAGTTGGTGACAACCT-T-TTCAAAAGTCCACA-CAAGTTGTTGA-
* *
151860 TAACC
124 CAACA
* ** * * * *
151865 TTTTCAAAAG-CCTACA-TATGTTGGTGGTAACCTTTTCAAAAGCCCACACGAGTTGTTGGCAAC
1 TTTTCAAAAGTCC-ACACGA-GTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-
* * ** * * * *
151928 CA-TTTCAAAGT-CTACACGAGTTGACAGA-AACC-TTTCAAAAGTCTACAGAAGTTGGTGGCAA
63 CATTTTCAAAATCCTACATGAGTTG-GTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA
*
151989 CC
127 CA
* * * * * *
151991 TTTTCAAAAGCCCAAACGAGTTGG-AAGCAA-CTATTTCAATAT-CCACACGAGTTGGTGGCAAC
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCT-TTTTAAAATCCCACAAGAGTTGGTGGCAAC
* * * ** *
152053 CTTTTGAAAAGT-CTACAAGAGTTGGTGGTAACCTTTTCAAAAGCCCACACAAGTTAG-TGACAA
64 ATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTT-GTTGACAA
*
152116 CT
127 CA
* * ** ** * * *
152118 TTTTCAAAATTCCGCACGAGTTGGTGGTAACCTTTTTAAAATTTCACACGTGTTGGTAGCAACCA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-CA
** * * ** * * * * * *
152183 -TTTCAAAGGCTTACATGAGTTTGTGGTAACCTTTTTAAAAGCCCACACGAGTTGGTGGCAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* ** * * * * * * *
152246 TTTTC-AAAGCCCACGTGATTTGTTGGCAACCGTTTAAAAAGT-CCACACGAGTTGGTGGCAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAA-TCCCACAAGAGTTGGTGGCAACA
* * ** * * ** * ** * ** *
152309 TTTTCAAAGTTC-ACACAAGTTTGG-GGCAACATAGTC-ATAGTCCACATGAGTTGGTGGTAACC
65 TTTTCAAAATCCTACATGAG-TTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * ** ** * * *
152371 TTTTCAGAAGGCTACACAAGTTGGTGGCAACCTTTTCAAAAGCTTACCCGAATTGGTGGAAACTT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * ** **
152436 TTTTAAAGTCC-ACATGAGTTGGTGGCAACCTTTTCAATAA--CCTATACGAGTTGGTGGTAATT
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAA-AAGTCC-ACACAAGTTGTTGACAACA
* * ** * * * * * * *
152498 TTTTC-GAAGTCTACATAAGTTGGTGGCAACCTTTTCAAAGT-CTACACA-AGTTGATTGC-CCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACA-AGAGTTGGTGGCAAC-
** * * * * * * * * * **
152559 ATAGTCAAAGTCC-ACACGAGTAGGTGGCAACCTTTCCAGAAG-CCTTCATAAGTTGGTGGTAAC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGACAAC
*
152622 C
128 A
* * * * * * * ** *
152623 TTTTC-AAAGTCTATACAAGTTGGTGGC-ACCATATTCAAAGT-CCACACA-AGTTGAAGGCAAA
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACC-TTTTTAAAATCCCACA-AGAGTTGGTGGCAAC
* * ** * ** ** * * * * * * * *
152684 ATTTTTAAAAGCCCGCACGAAATGGTGGTAACTTTTTTAAAAGCCCACACGAGTTGGTGGCAGCC
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * * * * * * *
152749 TTTTTAAATGCCCACATGACTTGATGGCAACCTTTTCAAAGT-CTACACGAGTTGGTGGTAACTT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * * * *
152813 TTTC-AAAGCCTGCACGAGTTAGTGGCAACCTTGTC-AATGTCCACACAAGTTTGTGGTA-ATC-
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAG-TTGTTG-ACAACA
* ** * * * * ** * * *
152874 TTTTCAAAAGTCCATACTCGTTGGGGGCAACCTTTTCAAAGT-CCACACTAGTTGATGGCAGCTT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * * * * * * *
152938 TTTTAAAAGCCTACACGAGTTGATGGCAGCCTTTTTAAAAG-CCTACACGAGTTGATGGCAGCC
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGACAACA
* * * *
153001 TTTTTAAAAG-CCTACACGAGTTGATGGCAACCTTTTCAAAATCCGCAC--GAGTTGGTGGCAAC
1 TTTTCAAAAGTCC-ACACGAGTTGGTGACAACCTTTTTAAAATCC-CACAAGAGTTGGTGGCAAC
* * * * * * * * ** * * *
153063 CTTTT-TATAGCCAACACGAGTTGGT-AGCAACATTTT-TAAAGTATACACGAGTTGGTGGCAAC
64 ATTTTCAAAATCCTACATGAGTTGGTGA-CAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA-
153125 CA
127 CA
* * * * * * * * *
153127 -TTTCAAAAGTCCACACTAGTTGGAGGCAACCATTTCAAAGT-TCACACGAGTTGGT-GCTAACC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGC-AACA
* ** * ** * * * * *
153189 TTTTC-AAATGCT-CATACGAGCAGGTGGCAATATTTTC-AAAGTCTATACAAGTTGGTGGC-CC
65 TTTTCAAAATCCTACAT--GAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAAC
153250 TA
128 -A
** ** *** ** * * * *
153252 TAGTC-AAAGTCCACACGCA-TTGGTGGTATTATTTTCGAAAGCCTACATGAGTTGGTGGCAACC
1 TTTTCAAAAGTCCACACG-AGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* * * * **** * * * *
153315 TTTTCAAAAGCCCATACGAGTTGGTGGTTGCCCTTTT-AAAA-ACCTACACGAGTTGATGGCAAC
65 TTTTCAAAATCCTACATGAGTTGGT-GACAACCTTTTCAAAAGTCC-ACACAAGTTGTTGACAAC
*
153378 C
128 A
* * ** * * * * * * *
153379 TTTTC-AAAGTCCATAGGAGTTGGTGGTAACC-TTTTCAAAGCACATACGAGTTAGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* * * * * * ** *
153442 TTTCAAAGTCC-ACATGAGTTGGTGGCAATC-TTTCAAAAGCCCACACGAGTTGTTGGCTGCC
66 TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * *
153503 TTTTTAAAAGGCCACACAAGTTGAT-AGCAACC-TTTTCAAATTCCACACA-AGTTAAG-GGTAA
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACA-AGAGTT-GGTGGCAA
* * * * * * ** * * *
153564 CTTTTTC-AAAGCC-CCTATGAGTTAGTGGCAAACTTTTC-AAAGTCCACATGAGCTGCTGGCAA
63 CATTTTCAAAATCCTAC-ATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAA
*
153626 CC
127 CA
* * * * * * ** **
153628 TTTTCAAAAG-CACAAACTAATTGGTGGCAACCCTTTCAATGT-CCACACTAGTTGGTGGCAACC
1 TTTTCAAAAGTC-CACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAA-C
* * * * * * **
153691 A-TTTCAAAGTCC-ACACGAGTTGATGGCAACC-TTTCAAAAG-CCTA-AAAGAGTTGGTGGTAA
64 ATTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCC-ACACA-AGTTGTTGACAA
*
153751 CC
127 CA
* * * *
153753 TTTTCAAAAGCCCAAATGCCCACACGAGTTGGTGACAACCATTTTAAAGT-CTACACGAGTTGGT
1 TTTTCAAAAG------T--CCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGT
* * ** * *
153817 GGCAACTTTTTCAAAAGT-CTACAAGAGTTATTGGCAACCTTTTC-GAAGTCCACACAAGTTGTT
58 GGCAACATTTTCAAAA-TCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTT
* *
153880 GGCAACT
122 GACAACA
* * ** * * * * *
153887 TTTTCAAAAGCCCACACGAATTGGTGGTAACATTTTTGAAATCCTACATGCGTTGGTGGCAA-AC
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA-
* * * * * *
153951 TTTTCAAAAT-CTCACACGAGTTGGTGACAACCATTTC-AAAGTCCACTCAAGCTGTTGGCAACC
65 TTTTCAAAATCCT-ACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
** * * * * *
154014 TTTTCAAAAACCCACACGAGTTGCT-AGCAACATTTTCAAAATCCCACACGAGTTGCTGGCAAC-
1 TTTTCAAAAGTCCACACGAGTTGGTGA-CAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACA
* ** * ** * * * * * * *
154077 CTTTCAAAATCCCCCACGAGTTGGTGGTAAGCTTTACAAATGTCCACACGAGTTGGTGGCAACC
65 TTTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
* * * * * * * * * * *
154141 TTTT-GAAAGCCCAAATGAGTTGTTGGCAACCTTTTCAAAAGCCCATAGGAGTTGGTGGCAACCT
1 TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
* *
154205 TTTCAAAAATCC-ACA-GAGTTGGTGGCAACCTTTTCAAAAATCCACA
66 TTTC-AAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACA
154251 TGAATTGGTG
Statistics
Matches: 15203, Mismatches: 4058, Indels: 2929
0.69 0.18 0.13
Matches are distributed among these distances:
107 27 0.00
108 33 0.00
109 15 0.00
110 111 0.01
111 85 0.01
112 7 0.00
113 6 0.00
114 9 0.00
115 1 0.00
116 5 0.00
117 8 0.00
118 4 0.00
119 58 0.00
120 8 0.00
121 29 0.00
122 101 0.01
123 90 0.01
124 255 0.02
125 1883 0.12
126 3893 0.26
127 4922 0.32
128 1293 0.09
129 100 0.01
130 39 0.00
131 10 0.00
132 43 0.00
133 281 0.02
134 617 0.04
135 805 0.05
136 75 0.00
137 18 0.00
138 8 0.00
139 14 0.00
140 107 0.01
141 107 0.01
142 82 0.01
143 53 0.00
144 1 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (128 bp):
TTTTCAAAAGTCCACACGAGTTGGTGACAACCTTTTTAAAATCCCACAAGAGTTGGTGGCAACAT
TTTCAAAATCCTACATGAGTTGGTGACAACCTTTTCAAAAGTCCACACAAGTTGTTGACAACA
Found at i:134191 original size:95 final size:96
Alignment explanation
Indices: 133997--134225 Score: 241
Period size: 95 Copynumber: 2.4 Consensus size: 96
133987 AGCTCACCTG
* ** * *
133997 AGTTGGTGACAACCTTTTCAAAATCCACACAAGTT-GTTGACAACCTTTTCAAAAGCCCATACAA
1 AGTTGGTGGCAACCTTTTCAAAATCCACATGAGTTGGTAGACAACCTTTTCAAAAGCCCACACAA
* *
134061 GTTGGTGATAACCTTTTCAAAATCCCACACG
66 GTTGGTGATAACATTTTCAAAATCCCACACA
** * *
134092 AGTTGGTGGCAATATTTTCAAAATCCTACATGAGTTGGTAG-CAA-CTTTTCAAAGGCCCACGCA
1 AGTTGGTGGCAACCTTTTCAAAATCC-ACATGAGTTGGTAGACAACCTTTTCAAAAGCCCACACA
* * *
134155 AGTTGGTGGTAATATTTTCAAAAAT-CCATACA
65 AGTTGGTGATAACATTTTC-AAAATCCCACACA
* * * *
134187 AGTTGGTAGCAACCTTTTTAAAAGCCCACTTGAGTTGGT
1 AGTTGGTGGCAACCTTTTCAAAA-TCCACATGAGTTGGT
134226 GGTAACCTTT
Statistics
Matches: 110, Mismatches: 20, Indels: 8
0.80 0.14 0.06
Matches are distributed among these distances:
95 90 0.82
96 17 0.15
97 3 0.03
ACGTcount: A:0.32, C:0.21, G:0.17, T:0.30
Consensus pattern (96 bp):
AGTTGGTGGCAACCTTTTCAAAATCCACATGAGTTGGTAGACAACCTTTTCAAAAGCCCACACAA
GTTGGTGATAACATTTTCAAAATCCCACACA
Found at i:134673 original size:32 final size:32
Alignment explanation
Indices: 134633--155776 Score: 3750
Period size: 32 Copynumber: 662.1 Consensus size: 32
134623 AATTATTGGT
*
134633 AACCTTTTCAAAAGCCCACACGAATTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
134665 AACCTTTTCAAAATCACACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * *
134697 AATCTTTTCAAAAACACATA-GTGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
134728 AACCTTTTC-AAAGTACACACAAGTTGTTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * * * *
134759 AACTTTTTTAGAAGCCCACATGGGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** * *
134791 AAACTTTTTAAAA-TCCACATAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
134822 AACCTTTTCAAAAAGCCCATACGAGTTGGTGGC
1 AACCTTTTC-AAAAGCCCACACGAGTTGGTGAC
* * *
134855 AACCCTTTT-AAAATCCCACTCGAGTTGGTAAC
1 AA-CCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
134887 -ACCTTTTCAAAATCCCACACAAGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** * * * * **
134918 ATCTTTTTCGATGGCCCATATGAATTCGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
134950 AATCTTTTCAAAAGCCTACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
134982 -ACCTTTTACAAAAGTCTAC-CTAAGTTGGTG-C
1 AACCTTTT-CAAAAGCCCACAC-GAGTTGGTGAC
** * * * * *
135013 AAGGATTTTC-AAAGCCAAAATGAGTTGTTGGC
1 AA-CCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
135045 AACCTTTTCAAAAGCCCACA-GAAGTTAGAGGC
1 AACCTTTTCAAAAGCCCACACG-AGTTGGTGAC
* ** ** *
135077 AACCTTTAC-AAAGTTCACACGAGTTTATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
135108 -ACCATAGTC-AAAGTCCACACGAGTTGG-GTAT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTG-AC
** * * * **
135139 AATATTTTCAAAAGCTCACATGAGTTGCTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*** * * * * *
135171 AACCTTTT-TGTAGTCTATACAAGTTGG-CAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** * *
135202 -ACCATAGTC-AAAGTCCACAC-AGATTGGTGGC
1 AACC-TTTTCAAAAGCCCACACGAG-TTGGTGAC
**** * *
135233 AACAAAGTC-AAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
135264 AACATTTTCAAAAGCCCACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** ** *
135296 AACCTTTTCGGAAGCGGACACGAGTTGCTCG-C
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * ** * ** *
135328 AGCTTTTTTTAAAGCCCACACGACTTAATGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * **
135360 AACCTTTTC-AAAGTTCACACGAGATAGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
135391 AACCTTTTCAAAAGTCCAAAAACCCACACAAGTTGGAGCC
1 AACCTTTTCAAAAG--------CCCACACGAGTTGGTGAC
* **** * * *
135431 AACCATTTC-AAAGTTTGCATGACTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
135462 AACATTGTCAAAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
135494 AAACTTTTC-AAAGCCTACACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
135525 AACCTTTTTAAAAGCTCACACAAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
135557 AA-CTTTTACAAAAACCTACATGTGTTGGTGGT
1 AACCTTTT-CAAAAGCCCACACGAGTTGGTGAC
* * **
135589 AATCTTTTTAAAAGCCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
135621 AACCTTTT-TAAAGTTCACACGAGTTTGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** ** * * **
135652 -ACCATAGTC-GTAGTCTACACGAGTTGGTGGT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * **
135683 AACATTTTTAAAAGTCTATACGAGTTGATGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
135715 AACCATTTCAAAAGCCCACACGAATTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** *
135747 AACCTTTT-TAAAGTCCATATAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
135778 AACCTTTTCAAAAGCCCACACAAGTTGTTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
135810 AGCACTTTT-AAAAGCCTACACGAGTTGATGGC
1 AAC-CTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
135842 AACCTTTTCAAAGGCCCACACGAATTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
135874 AACCTTTTTGAAAGTCCATAAGAGTTGGTGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
135906 AACCATTTC-AAAG-CCACACGAGTT-GTTAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * *
135936 AACTTTTTTAAAAGCCCAAATGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
135968 AACTTTTTCAATAA-CCCACATGAGTTGGTGGC
1 AACCTTTTCAA-AAGCCCACACGAGTTGGTGAC
* * *
136000 AACCTTTTTAAAAGACCACACGATTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * * *
136032 AACTTTTTC-AATGTTCACACAAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * **
136063 -ACCATAGTC-AAAGTCCACAAGAGTTGATGGT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * * *
136094 AACTTTTTTAAAAATCTACACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * *
136126 AGCC-AATCAAAAGCCCACACGAATTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
136157 AACCTTTTC-AAAGTCCATATGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
136188 AACCTTTTCGAAAGCCCACACGAGTTGTTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
136220 AGCCTTTTCAATAAGCCCACACGAGTTGATGGC
1 AACCTTTTCAA-AAGCCCACACGAGTTGGTGAC
* * *
136253 AACCTTTTC-AAAGTCCACATGAATTGG-G-C
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
136282 GTAACCTTTTC-ACAGCCCACACGAATTGGGGGC
1 --AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** **
136315 AATCTTTTC-AAAGCCCACACGAGTTAATGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *** * * *
136346 AACCCTTTC-AAAGTTTACACAAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * * *
136377 -ACCATAGTC-AAAGTCTA-AC-A-TT-TTCAAA
1 AACC-TTTTCAAAAGCCCACACGAGTTGGT-GAC
** ** * ** * *
136405 AACC--CACACGAGTTCGTGGCA-AC-TTTTCAAAGTCCACAC
1 AACCTTTTCAAAAG--C---CCACACGAGTT---GGT---GAC
** * *
136444 AAGTTGTTGGCAACTTTTTCAAAAGCCCACAAGAGTTGGCGGA-
1 AA--CCTT---------TTCAAAAGCCCACACGAGTTGG-TGAC
* * ** *
136487 AACCTTTTCAAAATCCTACACGAGTTTATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** **
136519 AATATTTTCAAAAGCCTGCACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * **
136551 AACCTTTTGAAAGGCCCAAACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
136583 AACCTTTTCAAAAGTCCACCCAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
136615 AACCTTTTC-AAAGCTCATACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
136646 AACTTTTTCAAAAGCTCACATGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
136678 AACTTTTTTAAAATG--CACACGAGTTGGTGGG
1 AACCTTTTCAAAA-GCCCACACGAGTTGGTGAC
* * * * **
136709 AACCTTTTTAAAAGCCTACATGAGTTAGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
136741 AACCTTTTC-AAGGTTCACACAAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * * * **
136772 ATCGTAGTC-AAAGTCCACATGAGTTGGCGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
136803 AACATTTTCAAATGTCTACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
136835 AACCTTTTCAAAAGCCCACCCGACTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
136867 AA-CTTTTTTAAAGTCCATATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
136898 AACCTTTTCAAAAGCCCATACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
136930 AGCCTTTTTAAAATCCTACACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
136962 AACCTTTTC-AAAGCCCAAAAGAGTTAAGG-G-C
1 AACCTTTTCAAAAGCCCACACGAGTT--GGTGAC
* * *
136993 AACCCTTTC-AAAGCCCACACGAATTGAG-GGC
1 AACCTTTTCAAAAGCCCACACGAGTTG-GTGAC
* * **
137024 AACCTTTT-TAAAGCCCACACGAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
137055 AACCTTTTC-AAAGTTCACACGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * **
137086 ACCACAGTT--AAAGTCCA-AC-A-TTTTTAGA-
1 AAC-CTTTTCAAAAGCCCACACGAGTTGGT-GAC
* ** *** **** ** *
137114 AGCCCTTACCAGTTGGTGGCA-GCCTT--T-TC
1 A-ACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
137143 AAAGTCTAT-AAAAG---T--TG-G-TGG-CAC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* ** * ** * * **
137167 TA--TAGTGAAAGTCCACACGA-GTTGGTGGCAAC
1 AACCTTTTCAAAAGCC-CAC-ACG-AGTTGGTGAC
* * ** ** * * * * *
137199 -A-TTCTCAAAAGCTCACATGA-GTTGATGG-CA-
1 AACCTTTTCAAA-AGCCCA-CACG-AGTTGGTGAC
* * ** *
137229 ACCTTTTCA-AAGGCCCACACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * **
137260 AGCCTTTTC-AAAGTCCACACAAGTTGTTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** *
137291 AATCTTTTCAAAAGCTCACATAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
137323 AACTTTTTCAAAATTCAACACGAGTTGGCGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
137355 AAACTTTT-AAAATCCCACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * **
137386 AACCTTTTCAAAAGCCTATACAAGTGGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * **
137418 AAGGTTTACAAATGGCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
137450 AACTTTTTC-AAAGCCCAAACAAGTTGTTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
137481 AACCTTTTCAAAAGCCAATAGGAGTAGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*** *
137513 AACCTTTTCAAAAATACACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
137545 AA-CTATTTC-AAAGTCCACATGAGTTGATGGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
137576 AAGC-TTTCAAAAGTCCACAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
137607 AACCTTTT-AAAAGTCTACAAGAGTTAGTTG-C
1 AACCTTTTCAAAAGCCCACACGAGTT-GGTGAC
** * * *
137638 AA-CTGTTTCAAAAGCTTACACGAGTTAGCGGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * *
137670 AA-CTTTT-ACAATGTCTACACCAATTGTTGGC
1 AACCTTTTCA-AAAGCCCACACGAGTTGGTGAC
* * * **
137701 AACCTTTTCACAAGTCCACATGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*** * *
137733 AACCTTTTCAAAAGTTTACAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
137765 AACAGTTTCAAAAGCCTATACGAGTTAGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
137797 AACTTTTTC-GAAGTCCACACTAGTTGTTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * *
137828 AACCTTTTCAAAAGTCCACACGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
137860 AAACTTTTCAAAATCCCACACAAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
137892 AACCTTTTCAAAATCCCACACAAGTTCGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * **
137924 AACCTTTTCAAAGGCCCACATGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
137956 AACCTTTTTAAAAATCAACCCGAGTCT-GTGGC
1 AACCTTTTCAAAAGCCCACACGAGT-TGGTGAC
* * * * * *
137988 AAACTTTTTAAAAGCTCGCATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** *
138020 AACCTTTTC-AAAGTTCACACGAGTTTGT-ATC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** * ** *
138051 -A--TAGTC-AAAGTCCA-AC-A-TTTTTAAAAGCTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGT----G-AC
* * * * * ** *
138081 ACACGAGTTGGTGGCAACCTTTTCCAAGTCTATAAAAATTGGT-AGC
1 A-AC--CTT--T-TCAA--------AAGCCCACACGAGTTGGTGA-C
** * * * *
138127 -ACCATAGTC-AAAGTCCAAACAAGTTGCTTG-C
1 AACC-TTTTCAAAAGCCCACACGAGTTG-GTGAC
* * ** * **
138158 AACATTTTCAAAAGCCCATATAACTT-GAAAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
*
138190 AACCTTTTCAAAAGCCCACACGAGTTGGTGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
138222 AGCCATTTTTAAAA-CTCACACAAGTTGATGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
138254 AACCTTTTC-AATGTGCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
138285 AACCTTTTCAAAAGCCGAAAGGCCCACAAGAGTTGGTGGT
1 AACCTTTTC---A----AAA-GCCCACACGAGTTGGTGAC
* * * *
138325 AACCTTTTTAAAAGTCTACGA-GAGTTGGTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* * *
138357 AAGCTTTTCAAAAGCCCACAAGAGTTAGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * **
138389 CACCTTTT-GAAAGTCAACACAAGTTGTTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
138420 AACCTTTTCAAAAACGCACACGAGTTAGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
138452 AACCTTTTCAAAATCGCAAACAAGTT-GT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* *
138483 AACCTTTTCAAAAACCCATA-GAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
138514 AAATTTTTTC-AAAGTCAACACAAGTTGTTGGA-
1 -AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * *
138546 AACTTTTTGAAAAGCCCACACGAGTTGGTTAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
138578 AACCTTTTC-AAAGTCTACACGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
138609 AACCTTTTCAAAACCCCATAGGAGTTAGG-GGT
1 AACCTTTTCAAAAGCCCACACGAGTT-GGTGAC
* * * *
138641 AACCTTTTCAAAATCCCACACGAGTTCGTAAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
138673 AACCTTTTTAAAGGCCCACACGAGTTGGT-AGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
138705 AACCTTTTTAAAAGCCCACACGAGTTGGAGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
138737 AAGCATTGT-AAAAGTCCACGCGAGTTGGTGGT
1 AA-CCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
138769 AACATTTTC-AATGCCCAAACGAGTTGTTGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
138800 AACCTTTTCAAAAGCTCATAGGAGATGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
138832 AA-CTTTT-ACACAGTTCGCAC--GTT-GTGGCAC
1 AACCTTTTCA-AAAGCCCACACGAGTTGGT-G-AC
** * * * *
138862 AA--TAGTC-AAAGTCCATATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * ** **
138891 AACCTTTTCAAAAATCCACATGAGTTATTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
138923 AA-CTATTTC-AAAGTCCACACGAGTTAGTGGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * **
138954 AACC-TCTCAAAAGTCCACAAAAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
138985 AATCGTTTT-AAAAGCCCAAAAGGTCACACAAATTGGGGGC
1 AA-CCTTTTCAAAAG-CC-------CACACGAGTTGGTGAC
** *
139025 AAAAATTTT--AAAGTCCACGA-GAGTTGGT-AGC
1 -AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGA-C
* * * *
139056 AACCTTTTCAAAAGTCTACAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
139088 AACCTTTTCAAAATCTCACACAAGTTGGAGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
139120 AACCTTTTCAAAATCCCACACAAGTTAGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * **
139152 AA-CTAGTTCAAAAGCCCACACAAGTTGGGGGT
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * **
139184 AACCTTTTCAAAAGTCCACACGAGTTGATGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
139216 AACCTTTTC-AAAGCCCACATGAGTCGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** *
139247 AACATTTTCAAAAGGCCACACGAGTTTATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * *
139279 GACTTTTTAAAAAACACACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
139311 AACCTTTTTGAAAGCCCACACGAGTTAGCGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
139343 AACCTTTTC-AAAGTCCACACGAGTTAGG-GAC
1 AACCTTTTCAAAAGCCCACACGAGTT-GGTGAC
* * **
139374 ATCCTTTTC-AAAGCCTACATAAGTTAGG-G-C
1 AACCTTTTCAAAAGCCCACACGAGTT-GGTGAC
* * * *
139404 AACCTTTTC-AAAGCCCATACGAGTT-ATTAGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
**
139435 AACCTTTTC-AAAGTTCACACGAGTTGGTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * * * ** *
139466 AATCTTTTAAAAAACCCAAACTTGTTGGTGCC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
139498 AACCTTTTC-AATGTCCACACGAGTTAAT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * **
139529 AACATTTTCAAAAGCTCACATGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
139561 AACCTTTTTAAAGGCCCTCACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
139593 AACAATTTC-AAAGTCCACAGGAGTCGAT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* *
139624 AA-CTTTTCAAAAGCCAAAAGCCCACATGAGTTGGTGGC
1 AACCTTTT-------CAAAAGCCCACACGAGTTGGTGAC
* * * *
139662 AACCTTTTAAAAAGTCTACGA-GAGTTGGTCG-T
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGT-GAC
* * *
139694 AACATTTTCAAAAGCCCAAATGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** ** *
139726 AACCTTTTC-AAAGTCCACATAAGTTATTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
139757 AACCTTTTCAAAAGCTCACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
139789 AACCTTTTCAAAATCCCGCATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
*
139821 AACCTTTTCAAAAGCTCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
139853 AACCTTTTC-AAAGTCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * **
139884 AACATTTTTGAAAGTCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
139916 AACCTTTTC-AAAGCCTACACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
139947 AACCTTTTTAAAAGCTCACACGAGTTCGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * **
139979 AA-TTTTTACAAAAACCAACATGAATTGGTGGT
1 AACCTTTT-CAAAAGCCCACACGAGTTGGTGAC
* * * **
140011 AACCTTTTTAAAAGCCCACAAGAGTTAGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * *
140043 AACCTTTAC-AAAGTTCACACGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *** *
140074 -ACCATAGTC-AGAGTTTACATC-AGTTGGT-AGT
1 AACC-TTTTCAAAAGCCCACA-CGAGTTGGTGA-C
* * * * **
140105 AACTTTTTCAAAAGCCTACAAGTGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
140137 AACCTTTTCAAAAGCCCACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
140169 AACCATTTT--AAAGTCCACACGAGTTGATGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
140200 AACC-TTTCAAAAGTCTACAAGAGTTGGTG-C
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
140230 AACCTTTTCAAAAGCCCACAAGAGTTAGAAGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTT-G--GTGAC
* * * *
140265 TA--TTTT--AATGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * **
140293 AATCTTTTGAAAAGTCTACAAGAATTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
140325 AACCTTTTCAAAAACGCACACGAGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
140357 AACCATTTT--AAAGTCTGCACCAGTTGTTGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* *
140388 AACCTTTTAAAAAGCTCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
140420 AACTTTTTCAAAATCTCGCACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
140452 AACCTTTTCAAAATCGCACACGTGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * **
140484 AACCTTTTCAATAGCCTACACGAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
140516 AACCTTTTCAAAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
140548 AACCTTTT-TAAAGCCCACGCGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
140579 AACCTTTT-AAAATGTCCACACGAGTTGGTGAC
1 AACCTTTTCAAAA-GCCCACACGAGTTGGTGAC
* * *
140611 AACATTTTCAAAACCCCACACGGGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
140643 AACCTTTTCAAAA-CTCTACATGAGTTGGTGGC
1 AACCTTTTCAAAAGC-CCACACGAGTTGGTGAC
** * * * *
140675 AACAATTTC-AAAGTCCATA-GAAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACG-AGTTGGTGAC
* * * * *
140706 AACC-TTTCAAATGTCCATAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
140737 ATCCTTTTCAAAAGCCTAGAAGCCCACAAGAATTGGTGGC
1 AACCTTTTC---A----A-AAGCCCACACGAGTTGGTGAC
* * * * * *
140777 AACCATTTC-AAAGACCATACAAGTTAGT-AGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* ** * ** * *
140808 AACCTTTTTAAAATTCTACAATAATTGG-CAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* *
140840 AACCTTTTCAAAAGCCCACCCGAGTTAGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
140872 AACCTTTTC-AAAGTCTTCACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
140903 AACC-TTTGAAAAGCCTACATGAGTTAGTCG-T
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* *
140934 AACCTTTTCAAAATG-CCACACGAGTTAGTGGC
1 AACCTTTTCAAAA-GCCCACACGAGTTGGTGAC
* * * * *
140966 AA-CTTTTTAAAATTCCTATACAAGTTGGT-AGC
1 AACCTTTTCAAAA-GCCCACACGAGTTGGTGA-C
* **
140998 AACCTTTTCAAAGGCCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * * *
141030 AACATTTTAAAAAATCTACACGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
141062 AACCTTTTTAAAAGCCCACACGAGTTGGTGTT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
141094 AACTTTTTCAAAATCGCACACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* *
141126 AACCTTTTCAAAAACCCATA-GAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * *
141157 AACCTTTTC-AAAGTCCACACAAGTTATTAAA
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * *
141188 AACTTTTTCTAAAGCAAACACGTGTTGGTGAA
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
141220 AACCTTTTC-AAAGTCCGCACAAGTTGGT-AGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
*** * *
141251 AACCTTTTCAAAAGGTGACCCGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * * * ** *
141283 AAATTTTTCAAAATCTCACTCCAGCTCATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
141315 ACCCGTTCCAAAATCCAACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** * ** ** * * *
141347 ATGCTTTTCAAAGGCCTTCATTACTTAGT-AGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * *
141379 AACCTTTTTAAAA-CCCATAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * **
141410 AACCTTTGCAAAAGTCCATATGAATTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
141442 AACATTTTC-AAAGCCCAAACGAGTCGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
141473 AATCTTTTCAAGAGCCCACAGGAGTTGGGGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * * *
141505 AACCTTTAC-AATGTTCACATGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * ***
141536 -ACCATAGTC-AAAGCCCACA-TAGTCAAAGCCCAC
1 AACC-TTTTCAAAAGCCCACACGAGT---TGGTGAC
* ** * ** **
141569 ATGA-GTTGGTGGCAACCTTTTCAAAAATCCACACAAGTTATTGGG
1 A--ACCTT--T----------TCAAAAGCCCACACGAGTTGGTGAC
* * *
141614 AA-CTATTTC-AAAGTCCACACGAGTTGATGGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
** * **
141645 AACC-TTTCAAAATTCCACAAGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
141676 AA-CTATTTTAAAAGCCCAAAAGGTCACACGAATTGGTGGC
1 AACCT-TTTCAAAAG-CC-------CACACGAGTTGGTGAC
*** ** * * *
141716 AAAAATTT--ATTGTCCACGCGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
141746 AACCTTTTAAAAAGTCTACAAGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
141778 AACCTTTTCAAAAG-CC-CA--TGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * ** *
141806 AACCTTTTC-ATAGTCTGCACAAGTTATTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
141837 AACCTTTTCAAAAGCCCACA-GAGTTGCTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
141868 AA-CTTTATTAAAATCTCGCACGAGTTGGTGGT
1 AACCTTT-TCAAAAGCCCACACGAGTTGGTGAC
* * * *
141900 AACCTTTTCAAAATCTCACATGTGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * ** * * * **
141932 TACATTTTTGAAGGCCTACACGAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
141964 AACCTTTTCAAAAGTCCATACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
141996 AACCTTTTC-AAAGCCCACGCGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
142027 AACCTTTTAAAAAGTCCACATGAGTTGGCGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
142059 AACATTTTCCAAAGCCCACTTGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* ****
142091 AAACTTTTCAAAAGTAGGCACGAGTTGGTCG-C
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * ** * * *
142123 AGCTTTTTTTAAAGCCCACATGAGTTGATGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * ** *
142155 AACTTTTTC-AAAGTCTACATGAGAAGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
142186 AACCTTTTCAAAAGTCCAAAAGCCCACACAAGTTGGAGGC
1 AACC-TTT------T-CAAAAGCCCACACGAGTTGGTGAC
* * **** * *
142226 AACCATTTC-AGAGTTTGCATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
142257 AACATTTTCAAAA-CTCTACGA-GAGTTGGTCG-T
1 AACCTTTTCAAAAGC-CCAC-ACGAGTTGGT-GAC
* *
142289 AACCTTTTCAAAAGCCCACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** * *
142321 AACTTTTTC-AAAGTCTACATAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
142352 AACCTTTTCAAAAGCTCACACAAATTGATGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** ** **
142384 AACATTTTCAAAATCCTGCATAAGTTGGCAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** *
142416 AACCTTTTCAAAAGCTAACATGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
142448 AACCATTTC-AAAGTGCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** **
142479 AACATTTTCAAAAGTTCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
142511 AACCTTTTC-AAAGCCTACACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
142542 AACATTTTTAAAAGCTCACACGAGTTGATGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
142574 AA-CTTTTACAAAAACCCACACGAGTTAGTGGC
1 AACCTTTT-CAAAAGCCCACACGAGTTGGTGAC
* * *
142606 AACCTTTTGAAAAG-CCACACGAGTTAGTGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * * **
142637 AACTTTTTCAAAATCCGGCATGAGTTGGGGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
142669 AACCTTTTGAAAATCCCACACGTGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * **
142701 AACCTTTTCAAAGGCCTACACAAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
142733 AA-CTTATTCAAAAGTCCACACAAGTTGCT-AGC
1 AACCTT-TTCAAAAGCCCACACGAGTTGGTGA-C
* ** *
142765 AACCTTTTC-AAAGCCTATGCGAGTTGTTAGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * **
142796 AACCTTTTAAAAAGTCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
142828 AACTTTTTCAAAAACCCACACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * **
142860 AACCTTTTCAAAA-CTCTACATGAGTTGGTGGT
1 AACCTTTTCAAAAGC-CCACACGAGTTGGTGAC
* * * * * * *
142892 AA-CTATTT-TAAAGTCTATAAGAGTTGATGCC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
142923 AACC-TTTCAAAAGTCTACAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
142954 AACCTTTTCAAAAGCCTAAAAGCTCACACGAATTGGTGGC
1 AACCTTTTCAAAAG-C------C-CACACGAGTTGGTGAC
* * * *
142994 AACCATTTC-AAAGTCCACACGAGTTAGTGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * ** * *
143025 AACCTTTTTAAAATTCTACAATAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
143057 AACCTTTTCAAAAGCGCACCCGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * *
143089 AACCTTTTC-AAAGTCTACATAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
143120 AACCTTTTCAAAAGCCCAAACGAGTTGGTGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
143152 AACCTTTTCAAAATCCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
143184 AACCTTTT-AAAATCCTACCCGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * **
143215 AA-CTATTTCAAAGGCCCAAACGAGTTGGTGGT
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
143247 AACATTTTCAAAAATCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
143279 AACCTTTTTAAAAGCCCACATGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
143311 AACCTTTTC-AAAGTTCACATGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * * *
143342 -ACCATAGTC-AAAGTCTA-AC-A-TT-TTCAG
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* ** ** ****** * * *
143369 AAGC-TCGCATTAGTTGGTGGCAACCTT--T-TC
1 AACCTTTTCAAAAG-CCCACACGA-GTTGGTGAC
** * ** * ** *
143399 AAAGTCTAT-AAAAGTTGGTGGCAC-CATAGTCAAAGT-CC
1 AACCT-TTTCAAAA----G-CCCACAC-GAGT--TGGTGAC
*** ** * * * *
143437 ACACGAGTT--AGTG-GCA-AC-A-TT-TTCAA
1 A-ACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*** * *** *** * * * *
143463 AAGCCCACATGAGTTGATGAGAACCA-TT--TCAA
1 AA--CCTTTTCAAAAGCCCA-CACGAGTTGGTGAC
** * *** ** * * *** *
143495 AAGCCCATACGAGTTG-GTAGCAGTCTTATTTAAAGCC
1 AA-CCTTTTC-AAAAGCCCA-CA--C-GAGTTGGTGAC
* * * * *** * * * **
143532 CACATGCATTGATGGTGACCTTTTCAAAGTCCA-TACATGTTGGT
1 AACCT--TTTCA-AAAG-CC----CACA--CGAGT---TGGTGAC
** ** * * ** *
143576 GGCAACATTTTCAAAAGCCCACGCGAGTTAGAAAA
1 AACCT---TTTCAAAAGCCCACACGAGTTGGTGAC
* * ** *
143611 AACCTTTTC-AAAGTCAACATAAGTTGCT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * * *
143642 AATCTTTTCAAAAGCTCACAGGATTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
143674 AACCTTTTCAAAATCATACACGAGTTAGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * *
143706 AATCTTTTCAAAAACCCACA-GTGTTGGTGAG
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
143737 AACCTTTTC-AAAGTCCACACAAGTTGTTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* *
143768 AACTTTTTCAAAAGCCCACACGGGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
143800 AACGTTTTCAAAA-TCCACACAAGTTGTTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
143831 AACCTTTTCAAAAGCCTACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
143863 AACCCTTTT-AAAATCCCACTA-GAGTTGGT-A-
1 AA-CCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* * *
143893 ATACCTTTTCAAAATCCCACACGAGTTGGTAAA
1 A-ACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
143926 AACCATTTCTAAGGCCCACACGAGTTGGTGGTG
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * * *
143959 ACCCTTTT-AAAGGGCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
143990 ACCCTTTGCAAAAGTCCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
144022 AAGATTTTC-AAAGCCTAAAC-ACGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGA-GTTGGTGAC
* * *
144053 AACTTTTTCAAAAGCCCACTA-GAGTTGTTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* ** * ** *
144085 AACCTTTAC-AAAGTTCACATGAGTTTATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
144116 -ACCATAGTCAAAA-TCCACACGAGTTGGGTG-T
1 AACC-TTTTCAAAAGCCCACACGAGTT-GGTGAC
** * * **
144147 AATATTTTCAAAAGCCGACACGAGTTGCTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
144179 AACCTTTT-TAAAGTCTATACAAGTTGG-CAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
*** * *
144210 -ACCACAATC-AAAGTCCACACGAGTTGGTGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
**** * * * *
144241 AACAAAGTC-AAAGTCCACACAAGTTGGCGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
144272 AACATTTTCCAAAGCCCACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** *
144304 AACCTTTTCAAAAGCAGACACGAGTTGGACG-C
1 AACCTTTTCAAAAGCCCACACGAGTTGG-TGAC
* * *** * *
144336 AGCTTTTTTTTAAGCCCACACGAGTTGATGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
144368 AATCTTTTC-AAAGCACACACGAGATGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
144399 AACCTTTTCAAAGGTCTAAAAGCCCACACAAGTTGGAGAT
1 AACC-TTT------TC-AAAAGCCCACACGAGTTGGTGAC
* **** *
144439 AACCATTTC-AAAGTTTGCACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
144470 AATATGTTCAAAAGTCTACGA-GAGTTGGTCG-C
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGT-GAC
*
144502 AACCTTTTCAAAAGCCCAAACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** *
144534 AACTTTTTC-AAAGTCCACTA--AGTTATTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* * *
144564 AACCTTTTCAAAAGCTCACA-AAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
144595 AACCCTTTCAAAATCTCACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** *
144627 AACCTTTTTGAAAGCTCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
144659 AACCTTTTC-AAAGTCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
144690 AACATTTTCAAAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
144722 AACCTTTTC-AAAGCCTACACAAGTT-GTTAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * **
144753 AACCTTTTTAAAAGCTCTCATGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
144785 AA-CTTTTACAAAAACCCACACGAGTTGGTGGC
1 AACCTTTT-CAAAAGCCCACACGAGTTGGTGAC
** ** *
144817 AACCTTTTC-AAAGTTCACACGAGTTTATG-G
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * * *
144847 TACCATAGTC-AAAGTCTACACGAGTTGGTAAT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
144879 AATCTTTCCAAAAGCCTACACGTGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
144911 AACCATTTCAAAAGCCCACACGAATTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
144943 AACCATTTCAAAAG-----TC---TTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*** * ** *
144967 AACC-TTTCAAAAGTATACAAGAGTCAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
144998 AACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGG-AAGT
1 AACCTTTTCAAAAGCCC---A---CAC--GAGTTGGTGA-C
* * *
145038 AA-CTATTTCAAAATG--CACATGAGTTGGCGGC
1 AACCT-TTTCAAAA-GCCCACACGAGTTGGTGAC
* * * **
145069 AACC-TTTCGAAAAGTCTACAAGAGTTGGTGGT
1 AACCTTTTC-AAAAGCCCACACGAGTTGGTGAC
* * * *
145101 AACCCTTTCCAAAGGCCACACGAGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
145133 AACCTTTTC-AAAGTCTACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
145164 AACCTTTTGAGAAGCCCACATGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
145196 AA-CTTTGTCAAAATCCCACACGAGTTGGTGGT
1 AACCTTT-TCAAAAGCCCACACGAGTTGGTGAC
*
145228 AACCTTTTCAAAATCCCACACGTA-TTGGT-AGC
1 AACCTTTTCAAAAGCCCACACG-AGTTGGTGA-C
* * * * **
145260 TACTTTTTCAAAGGCCTACACGAGCTT-GTGGT
1 AACCTTTTCAAAAGCCCACACGAG-TTGGTGAC
* * * * *
145292 AACCTTTTCAATAGTCCGCACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** *
145324 AATCTTTTC-AAAGCCGATGCGAGTT-GTTAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * **
145355 CACCTTTTAAAAAGCCCACACGAGTTAGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
145387 AACCTTTTCAAAAACCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * *
145419 AACCTTTTAAAAATCTTATACCAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * ** * *
145451 AACCTTTTTAGAAGGTCACACTAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** *
145483 AACCTTTTC-AAAGTCTATAAAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
145514 -ACCATAGTC-AAAGTCCACACGAGTTAGTGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
145545 AACATTTTCAAAAGCCCACATGAGTTGAT-AGG
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
*
145577 AA-TTATTTCAAAAGCCCACACGAGTTGGT-AGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * * *
145609 AGCCTTATT-TAAAGTCCACACGCGTTGATGGC
1 AACCTT-TTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
145641 AACCTTTTC-AAAGTCCACATGTGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * **
145672 ACCCTTTCAAAAGCCTAAAAGCCCATAAGATTTTGTGGT
1 AACCTTT------TC-AAAAGCCCACACGAGTTGGTGAC
* * *
145711 AACCTTTTCAAAAGTCTACGA-GAGTTGGTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
*** * * *
145743 AACCTTTTCAAAAGCCCATGTGAGCTAGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * ** * *
145775 AACATTTTC-AAAGTCAATATAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
145806 AACCTTTTCAAAATCCCACACTAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
145838 AACCTTTTCAAAATCGCACATGAGTTACT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
145870 AATCTTTTCAAAAACCCACA-GTGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
145901 AACCTTTTC-AAAGTCCACACAAGTTATTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * * *
145932 AACTTTTTCAAAAG-CCATACGGGTTGGTGAA
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * *
145963 AACCTTTTCAAAA-TCCACAAAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
145994 AACCTTTTCAAAAGCCTACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
146026 AACCTTTTTAAAATCCCACTCGAGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
146058 -ACCATTTCAAAATCTCACATGAGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
146089 AACCTTTTCTAAGGCCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * **
146121 AATCTTTTCAATAGCATACACAAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
146153 ACCCTTTGCAAAAGTCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
146185 AAGATTTT-TAAAGCCCAAAC-ACGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGA-GTTGGTGAC
* * *
146216 AACTTTTTCAAAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** ** *
146248 AACCTTTAC-AAAGTTCACACGAGTTTATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
146279 -ACCATAGTC-AAAGTCCACACGAGTTGGGTG-T
1 AACC-TTTTCAAAAGCCCACACGAGTT-GGTGAC
** ** * **
146310 AATATTTTCAAAAGCCGGCACGAGTTGCTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * * *
146342 AACATTTT-TAAAGTCTATACAAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * ** * *
146373 -ACCATAGTC-ATAGTACACACGAATTGGTGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
**** * *
146404 AACAAAGTC-AAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
146435 AACATTTTCAAAAGCCCACATAAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
**
146467 AACCTTTTCAAAAGCAAACACGAGTTGGTCG-C
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * ** * *
146499 AGCTTTTTTTAAAGCCCACACGAGTTGATGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
146531 AATCTTTTC-AAAGCCCACACAAGTTGGAGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **** *
146562 AACCATTTC-AAAGTTTGCACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
146593 AACATGTTCAAAAGTCTACGA-GAGTTGGTCG-C
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGT-GAC
* *
146625 AACCTTTTCAAAAGCCCAAATGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** *
146657 AACTTTTTC-AAAGTCCACTA--AGTTATTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* * *
146687 AACCTTTTCAAAAGCTCACA-AAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
146718 AACCCTTTCAAAATCCCACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** *
146750 AACCTTTTTGAAAGCTCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
146782 AACCTTTTC-AAAGTCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
146813 AACATTTTCAAAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
146845 AACCTTTTC-AAGGCCTACACAAGTT-GTTAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * * **
146876 AACGTTTTTAAAAGCTCTCATGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
146908 AA-CTTTTACAAAAACCCACACGAGTTGGTGGT
1 AACCTTTT-CAAAAGCCCACACGAGTTGGTGAC
* * **
146940 AACCTTTTTAAAAGCCCATACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * ** *
146972 AACCTTTTC-AAAGTTCACATGAGTTTATG-G
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * * *
147002 TACCATAGTC-AAAGTCTACACGAGTTGGTAAT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
147034 AATCTTTCCAAAAGCCTACACGTGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
147066 AACCATTTCAAAAGCCCACACGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
147098 AACCATTTCAAAAG-----TC---TTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
147122 AACC-TTTCAAAAGTCTACAAGAGTCGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
147153 AACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGG-AAGT
1 AACCTTTTCAAAAGCCC---A---CAC--GAGTTGGTGA-C
* * * **
147193 AA-CTATTTCAATATG--CATATGAGTT-GCCAGC
1 AACCT-TTTCAA-AAGCCCACACGAGTTGGTGA-C
* * * **
147224 AACC-TTTCGAAAAGTCTACAAGAGTTGGTGGT
1 AACCTTTTC-AAAAGCCCACACGAGTTGGTGAC
* *
147256 AACCCTTTTC-AAAGGCCACACGAGTTGGTAAC
1 AA-CCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** *
147288 AACCTTTTC-AAAGTCTACACAAGTTTTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
147319 AACCTTTTGAGAAGCCCACATGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
147351 -ACCTTTGTCAAAATCCTGCACGAGTTGGT-AGT
1 AACCTTT-TCAAAAGCCCACACGAGTTGGTGA-C
* *
147383 AACCTTTTCAAAATCCCACAC-ATATTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGA-GTTGGTGA-C
* * * * **
147415 TACCTTTTCAAAGGCCTACACGAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
147447 AACCTTTTCAAAAGTCCGCACAAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *** *
147479 AATCTTTTC-AAAGCCCATGTGAGTT-GTTAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
147510 AATCTTTTAAAAAGCCCACACGAGTTGGTGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
147542 AACCTTTTTAAAAACCCACACGAGTTGGGGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
147574 AACCTTTTCAAAATCCTATACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * **
147606 AACCTTTTCAAAGGCCCATACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *** * * *
147638 AACATTTTCAAAAATTCGCACGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
147670 AACCTTTTTAAATGCCCACATGAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
147702 AACCTTTTC-AAAGTTCACAGGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * * *
147733 -ACCATAGTC-AGAGTCCA-AC-ATTTTCAAAACGTCAC
1 AACC-TTTTCAAAAGCCCACACGA-GTT-----GGTGAC
** * * * * ** *
147768 ACAAGTTGGTGGCAACCTTTTCAAAGTCTATAAAAGTTGGTGGC
1 A-ACCTT--T-TC-A-------AAAGCCCACACGAGTTGGTGAC
** * * *
147812 -ACCATAGTC-AAAGTCCACACGAGTTAGTGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* ** ** *
147843 AACATTTTCAAAAGCCCACATTAGTTAAT-AGG
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
147875 AA-CTATTTCAAAAGCCCACACGAGTTGGT-AGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * *
147907 AGCCTTATT-TAAAGTCCACACGCGTTGATGGA-
1 AACCTT-TTCAAAAGCCCACACGAGTTGGT-GAC
* * * * *
147939 AACCTTTTC-AAAGTCCACATGTGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
147970 AACCCTTTCAAAAGCCCAAAAGCCCATAAGATTTTGTGGT
1 AACCTTTTCAAAAGCCC---A---C--ACGAGTTGGTGAC
* * *
148010 AACCTTTTCAAAAGTCTACGA-GAGTTGGTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
** * * *
148042 AACCTTTTCAAAAGCCCATGCGAGCTAGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** * *
148074 AACATTTTC-AAAGTCAACATAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
148105 AACTTTTTCAAAAGCCCACACTAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
148137 AACCTTTTCAAAATCGCACATGAGTTAGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
148169 AATCTTTTCAAAAACCCACA-GTGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
148200 AACCTTTTC-AATGTCCACACAAGTTATTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * *
148231 AACTTTTTCAAAAGCCCACACGGGTTGGTGAA
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
148263 AACCTTTTCAAAA-TCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
148294 AACCTTTTCAAAAGCCTACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
148326 AACCCTTTT-AAAATCCTACTCGAGTTGGTAAC
1 AA-CCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
148358 -ACCATTTCAAAATCTCACATC-AGTTGGTAAC
1 AACCTTTTCAAAAGCCCACA-CGAGTTGGTGAC
* * **
148389 AACCTTTTCTAAGGCCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** **
148421 AATCTTTTCAATAGCATACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
148453 ACCCTTTGCAAAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * **
148485 AAGATTTT-TAAAGCCCAAAC-ACGTTATTGGA-
1 AACCTTTTCAAAAGCCCACACGA-GTTGGT-GAC
* *
148516 AACTTTTTCAAAAGCCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
148548 AACCTTTAC-AAAGTTCAAATGAGGTT-GTGGC
1 AACCTTTTCAAAAGCCCACACGA-GTTGGTGAC
*** * * *
148579 -ACCACAGTC-AAAGTCTACACGAGTTGGGTG-T
1 AACC-TTTTCAAAAGCCCACACGAGTT-GGTGAC
** * *
148610 AATATTTTCAAAAGCCCACACGAGTTGCT-AGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* *** ** * * *
148642 AACCTTTT-TAAAGTTTATGCAAGTTGGCGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
148673 -ACCATAGTC-AAAGTCCACACG-GATTGGTGGC
1 AACC-TTTTCAAAAGCCCACACGAG-TTGGTGAC
**** * *
148704 AACAAAGTC-AAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
148735 AACATTTTCAAAAGCCCACATAAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
**
148767 AACCTTTTCAAAAGCAAACACGAGTTGGTTG--
1 AACCTTTTCAAAAGCCCACACGAGTTGG-TGAC
* * ** * *
148798 TAGCTTTTTTAAAGCCTACACGAGTTGAT-ATC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* ** *
148830 AATCTTTTC-AAAGTTCACACGAGATT-GTGGC
1 AACCTTTTCAAAAGCCCACACGAG-TTGGTGAC
* * *
148861 AACCTTTTCAAAGGTCCAAAAGCCCACACAAGTTGGAGGC
1 AACC-TTT------T-CAAAAGCCCACACGAGTTGGTGAC
* * **** * * *
148901 AATCATTTC-AAAGTTTGCACAAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
148932 AATATTTTCAAAAGTCTACGA-GAGTTGGTCAC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* * * *
148964 AACCGTTTCAAAAGCTCACATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
148996 AACCTTTTCGAAATCCTACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
149028 AACCTTTTCAAAAGCTCACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
149060 AACCTTTTCAAAATCCTACATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* *
149092 AACCTTTCCAAAAGCTCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
149124 AACCTTTTC-AAAGTCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * * * *
149155 AATATTTTCAAAAGTCTATAAGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
149187 AACCTTTTCAAATGCTTAAAAGCCCACAAGAGTTGG-AAGC
1 AACC-TTT----T-C--AAAAGCCCACACGAGTTGGTGA-C
* * * * **
149227 AA-CTATTT-TAATGTCCATACGAGTTGGTGGT
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
** * * * * **
149258 AATATTTTGAAAAGTCTACAAGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
149290 AACCTTTTCAAAAGCTTACACGAGTTGGTAAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * *
149322 AACCTTTTC-AAAGTCTGCACAAGTT-GTTAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** * ** * *
149353 AATTTTTTCGAAAGCCCACTTGAGTTGGTAAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
149385 AACTTTTTCAAAATCCCGCACGAGTTAGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
149417 AACCTTTTCAAAATCCCGCACGTGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * *
149449 AACCTTTTCAAAGGCCTACATGAGTTTGTCG-T
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * *
149481 AACCTTTTCAAAAGTCGACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
149513 AACCTTTTC-AAAGCCCACGTGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
149544 AACCATTTAAAAAGTCCACACAAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
149576 AACCTTTTCAAAAACCCACACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
149608 AACTTTTTCAAAA-CTCTACACGAGTTGGTGGC
1 AACCTTTTCAAAAGC-CCACACGAGTTGGTGAC
* * * * * *
149640 AA-CTATTTC-AAAGTCCATAGGAATTGATGGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * *
149671 AACC-TTTCAAAAGTCCACAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
149702 AACCTTTTCAAAAGCCTAAAAGCCCACACGAATTGGTGGT
1 AACCTTTT-------C-AAAAGCCCACACGAGTTGGTGAC
* * * **
149742 AACCATTTC-AAAGTCCACACGAGTTAGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * ** *
149773 AACCTTTTTAAAATTCTATAATAGTTGGTGCC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
149805 AACCTTTTCAAAAGCCCACCCGAGTTAGTGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
149837 AACCTTTTCAAAA-TCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
149868 AACCTTTTCACAAGCCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
149900 AACCTTTTCAAAATCCCACTCGAGTTGGTGGG
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
149932 AACCTTTTCAAAATCCTACATGAGTTAGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * ** **
149964 AACATTTTCAAAGGCTTACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * **** * * *
149996 AATATTTTTAAAAATATACATGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
150028 AACATTTTTAAAAGCCAACATGAGTTGCT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* **
150060 AACCTTTTCAAAGGCCCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** ** * ** *
150092 AATATTTTCAAAAATCTACATAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
150124 AA-CTATTTTAAAAGCCCACATGAGTTGGTGGT
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
** * *
150156 AACCTTTTC-AAAGTTCACACGAGTT-TTTAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** * * * *
150187 -ACCATAGTC-AAAGTCTA-AC-ATTTTCAGAAGCTCAC
1 AACC-TTTTCAAAAGCCCACACGA-GTT--G--G-TGAC
* * * * * ** *
150222 ATTA-GTTGGTGGCAACCTTTTCAAAGTCTATAAAAGTTGGTGGC
1 A--ACCTT--T-TC-A-------AAAGCCCACACGAGTTGGTGAC
** * * **
150266 -ACCATAGTC-AAAGTCCACACGAGTTCGTGGT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
150297 AACATTTTCAAATGCCCACATGAGTTGATGGG
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
150329 AACCATTTCAAAAGCCCACGCGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * *
150361 AGCCTTATCTAAAGCCCACACGCA-TTGATTG-C
1 AACCTTTTCAAAAGCCCACACG-AGTTG-GTGAC
* * *
150393 AACATTTTC-AAAGTCCACAC-ATGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGA-GTTGGTGAC
* **
150424 AACCTTTTCAAAAGCCCAAAAATCCATACGAATTGGTGGT
1 AACCTTTTCAAAAGCCC----A--C--ACGAGTTGGTGAC
* ** *
150464 AACCTTTTCAAAAGTCTGCGA-GAGTTGGTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* * * * * *
150496 AACCTTTTCAAAAGTCTACGCGAGTTAGTAAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** * *
150528 AACCTTTTC-GAAGTCAACATAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
150559 AACATTTTCAAAAGCCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
150591 AACCTTTTCAAAATCGCACATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** *
150623 AATCTTTTAAAAAACATACA-GTGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
150654 AACCTTTTC-AAAGTCCACACAAGTTGTTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * * * *
150685 AACTTTTTCAAATGCCCAGACGGGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
150717 AACCTTTTCAAAA-TCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
150748 AACCTTTTCAAAAGCCCAAACGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
150780 AACCCTTTT--AAAGTCCCACTCAAGTTGGTAAC
1 AA-CCTTTTCAAAAG-CCCACACGAGTTGGTGAC
* *
150812 -A-CTATTTCAAAATCCCACACGAGTTGGTAAC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
150843 AACCTTTTCCAAGGCCGACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
150875 AACCTTTTCAAAAGCACACACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * ** * * *
150907 ACCCTTTACAAAAATCCACATGAATTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * ** *
150939 AAGATTTTC-AAAGCCCAAACAAGTTTTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
150970 AACCTTTTCAAAAGCCCACAGGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *** * ** *
151002 AACCTTTAC-AAAGTTTACACAAGTTTATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
151033 -ACCATAGTC-AAAGTCCACACGAGTTGGGTG-T
1 AACC-TTTTCAAAAGCCCACACGAGTT-GGTGAC
** ** *
151064 AATATTTTCAAAAGCTGACACGAGTTGCTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
** * * * * * *
151096 AA-CTTTTTTAAAGTCTATACAAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** ** *
151127 -ACCATAGTC-AAAGTACACACGAGTTGGTGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
**** * *
151158 AACAAAGTC-AAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
**** * *
151189 AACAAAGTC-AAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
151220 AACATTTTCAAAAGCCCACATAAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * ** * *
151252 AACCTTTACAAATGCAAAAACGAATTGGTCG-C
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
* * ** * * * * *
151284 AGCTTTTTTTAAAGACCATATGAGTTGCTGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
151316 AACCTTTTC-AAAGTCCACATGAGATGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
151347 AACCTTTTCAAAAGTCCAAAAGCCCACAGAAGTTGCAGGC
1 AACCTTTTCAAAAG-CC-----CACAC-G-AGTTGGTGAC
* * **** *
151387 AACCATTTC-ATAGTTTGCACGAGTTGGTGAT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
151418 AACATTTTCAAAAGTCTACGA-GAGTTGGTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
151450 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
151482 AACCTTTTC-AAAGTCCACATAAATTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
151513 AACCTTTTCAAAAGCTCACACAAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
151545 AACCTTTTCAAAATCCCATATGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * ** *
151577 AACATTTTCCAAAGCTCACATAAGTTGGTAAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
151609 AACCTTTTC-AAAGTCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *
151640 AACATTTTCAAAAGTTCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
151672 AACCTTTTC-AAATCCTACACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
151703 AACGTTTTTAAAAGCTCACACGAGTTGATGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
151735 AA-CTTTTACAAAATCCCACACGAGTTGGTGGT
1 AACCTTTT-CAAAAGCCCACACGAGTTGGTGAC
* **
151767 AACCATTTT-AAAAGCCCACGCGAGTTGGTGGT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
151799 AACCTTTTC-AAAGCTCACACGAGTTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
151830 -A-CTATAGTC-AAAGTCTACATGAATTGGT-AGT
1 AACCT-T-TTCAAAAGCCCACACGAGTTGGTGA-C
* * **
151861 AACCTTTTCAAAAGCCTACA-TATGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGA-GTTGGTGAC
* *
151893 AACCTTTTCAAAAGCCCACACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
151925 AACCATTTC-AAAGTCTACACGAGTTGACAGA-
1 AACCTTTTCAAAAGCCCACACGAGTTG-GTGAC
* * *
151956 AACC-TTTCAAAAGTCTACA-GAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACG-AGTTGGTGAC
* *
151987 AACCTTTTCAAAAGCCCAAACGAGTTGG-AAGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *
152019 AA-CTATTTCAATA-TCCACACGAGTTGGTGGC
1 AACCT-TTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
152050 AACCTTTTGAAAAGTCTACAAGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
152082 AACCTTTTCAAAAGCCCACACAAGTTAGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * **
152114 AACTTTTTCAAAATTCCGCACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *** *
152146 AACCTTTTTAAAATTTCACACGTGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * ** * * **
152178 AACCATTTCAAAGGCTTACATGAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
152210 AACCTTTTTAAAAGCCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
152242 AACCTTTTC-AAAGCCCACGTGATTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
152273 AACCGTTTAAAAAGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
152305 AACCTTTTC-AAAGTTCACACAAGTTTGG-GGC
1 AACCTTTTCAAAAGCCCACACGAG-TTGGTGAC
* ** * * * **
152336 AACATAGTC-ATAGTCCACATGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
152367 AACCTTTTCAGAAGGCTACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * *
152399 AACCTTTTCAAAAGCTTACCCGAATTGGTGGA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
** * * *
152431 AA-CTTTTTTAAAGTCCACATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
152462 AACCTTTTCAATAA-CCTATACGAGTTGGTGGT
1 AACCTTTTCAA-AAGCCCACACGAGTTGGTGAC
** * * * ** *
152494 AATTTTTTC-GAAGTCTACATAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
152525 AACCTTTTC-AAAGTCTACACAAGTTGATTG-C
1 AACCTTTTCAAAAGCCCACACGAGTTG-GTGAC
* * * *
152556 --CCTATAGTC-AAAGTCCACACGAGTAGGTGGC
1 AACCT-T-TTCAAAAGCCCACACGAGTTGGTGAC
* * ** ** **
152587 AACCTTTCCAGAAGCCTTCATAAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
152619 AACCTTTTC-AAAGTCTATACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** *
152650 -ACCATATTC-AAAGTCCACACAAGTTGAAGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
** * * ** **
152681 AAAATTTTTAAAAGCCCGCACGAAATGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
152713 AACTTTTTTAAAAGCCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * *
152745 AGCCTTTTTAAATGCCCACATGACTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
152777 AACCTTTTC-AAAGTCTACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * *
152808 AACTTTTTC-AAAGCCTGCACGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * **
152839 AACCTTGTC-AATGTCCACACAAGTTTGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** * *
152870 AATCTTTTCAAAAGTCCATACTCGTTGGGGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
152902 AACCTTTTC-AAAGTCCACACTAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
152933 AGCTTTTTTAAAAGCCTACACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
152965 AGCCTTTTTAAAAGCCTACACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
152997 AGCCTTTTTAAAAGCCTACACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
153029 AACCTTTTCAAAA-TCCGCACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
153060 AACCTTTT-TATAGCCAACACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * *** *
153091 AACATTTT-TAAAGTATACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
153122 AACCATTTCAAAAGTCCACACTAGTTGGAGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
153154 AACCATTTC-AAAGTTCACACGAGTTGGTG-C
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** *
153184 TAACCTTTTCAAATGCTCATACGAGCAGGTGGC
1 -AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * * *
153217 AATATTTTC-AAAGTCTATACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
153248 --CCTATAGTC-AAAGTCCACACGCA-TTGGTGGT
1 AACCT-T-TTCAAAAGCCCACACG-AGTTGGTGAC
*** * * * *
153279 ATTATTTTCGAAAGCCTACATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
153311 AACCTTTTCAAAAGCCCATACGAGTTGGTGGTT
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-GAC
** * * * *
153344 GCCCTTTT-AAAAACCTACACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
153375 AACCTTTTC-AAAGTCCATAGGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
153406 AACCTTTTC-AAAGCACATACGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
153437 AACCTTTTC-AAAGTCCACATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
153468 AATC-TTTCAAAAGCCCACACGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
153499 TGCCTTTTTAAAAGGCCACACAAGTTGAT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
** * *
153531 AACCTTTTC-AAATTCCACACAAGTTAAGG-G-T
1 AACCTTTTCAAAAGCCCACACGAGTT--GGTGAC
* * * *
153562 AACTTTTTC-AAAGCCC-CTATGAGTTAGTGGC
1 AACCTTTTCAAAAGCCCAC-ACGAGTTGGTGAC
* * * * * *
153593 AAACTTTTC-AAAGTCCACATGAGCTGCTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
153624 AACCTTTTCAAAAGCACAAACTAATTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
153656 AACCCTTTC-AATGTCCACACTAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
153687 AACCATTTC-AAAGTCCACACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
153718 AACC-TTTCAAAAGCCTAAAAGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
153749 AACCTTTTCAAAAGCCCAAATGCCCACACGAGTTGGTGAC
1 AACCTTTTC---A----AAA-GCCCACACGAGTTGGTGAC
* * *
153789 AACCATTTT--AAAGTCTACACGAGTTGGTGGC
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * ** *
153820 AACTTTTTCAAAAGTCTACAAGAGTTATTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
153852 AACCTTTTC-GAAGTCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
153883 AACTTTTTCAAAAGCCCACACGAATTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * * * *
153915 AACATTTTTGAAATCCTACATGCGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
153947 AAACTTTTCAAAATCTCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * *
153979 AACCATTTC-AAAGTCCACTCAAGCTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
154010 AACCTTTTCAAAAACCCACACGAGTTGCT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * *
154042 AACATTTTCAAAATCCCACACGAGTTGCTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * **
154074 AACC-TTTCAAAATCCCCCACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
154105 AAGCTTTACAAATGTCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
154137 AACCTTTT-GAAAGCCCAAATGAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
154168 AACCTTTTCAAAAGCCCATAGGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** *
154200 AACCTTTTCAAAAATCCACA-GAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * **
154231 AACCTTTTCAAAAATCCACATGAATTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
154263 AACCATTTC-AAAGTCCACATGAGTTAAT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * * * *
154294 AACC-GTTCAAAAGTCCATAAGAGTTGGTGTC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
154325 AACCTTTTCAAAAGCCCAAAAGCCCACATATGTAGGTGGA-
1 AACCTTTTCAAAAGCCC---A---CAC-GA-GTTGGT-GAC
* * *** * *
154365 TACCTTTTCAAAAGTCTGTAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
154397 AACCTCTTCAAAAGCCCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
154429 AACTTTTTC-AAAGTCCACA-GAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACG-AGTTGGTGAC
* * *
154460 AACCTTTTCAAAAGCCCACATGTGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * **
154492 AACCTTTTCAAAATCTCGCACGAGTTCGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
154524 AACCTTTTTAAAA-TCCACACAAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
* * ** ** **
154555 AACC-TTTCGAAGGCCCACATAAGTTAATGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * *
154586 AACCATTTCAAAAAACCAAATGAGTTGGTAGTA-
1 AACCTTTTCAAAAGCCCACACGAGTTGGT-G-AC
** **
154619 AA-CTTTTCAAAAAACCACACGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** * * *
154650 AACCTATTCAAAAATCCACACGAATTTGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * ** *
154682 AACCATTTC-AAAGTCCACATGAGTTAATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * ** *
154713 AGTC-TTTCAAAAGTCCACAAGAGTTATTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
154744 AATCTTTTCAAAAGCTCAAAAGCCCAAACGAGTTGGT-AGC
1 AA-CCTTT-------TCAAAAGCCCACACGAGTTGGTGA-C
* * **
154784 AACCTTTTCAAAAGCCTA-GCGAGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
154815 AACCTTTTC-AAAGTCTACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * *
154846 AA-GTTTTCCAAAGTCTATACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * *
154877 -ACCATAGTC-AAAGTCCAAATGAGTTAGG-GGC
1 AACC-TTTTCAAAAGCCCACACGAGTT-GGTGAC
* * * * *
154908 AACATTTTTAGAAGCCCACAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
154940 AACCTTTTC-AAAGTCTAATACAAGTTGGTGGC
1 AACCTTTTCAAAAG-CCCACACGAGTTGGTGAC
** * *
154972 -ACCATAGTC-AAAGTCCC-CACGTGTTGGTGGC
1 AACC-TTTTCAAAAG-CCCACACGAGTTGGTGAC
* * * * *
155003 AACATTTTCAAAAGCCTACATGAATTGGCGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * *
155035 AAACTTTTC-AATGTCCACAAGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* ** *** * * *
155066 AACC--TACAAGTTGGTGGTA-AC--CTT-TTCA-
1 AACCTTTTCAA--AAG-CCCACACGAGTTGGTGAC
* *** *** * * * *
155094 AAGC-GCACAAAAGTTGATGGTACCATAGTTAAAGT-TC
1 AACCTTTTCAAAAGCCCA---CA-C-GAGTT--GGTGAC
* * * * **
155131 ACACGAGTTGGTGGCAACCTATTAAAAGCCCACATGAGTTTGTGGT
1 A-AC--CTT--T----T-C----AAAAGCCCACACGAGTTGGTGAC
** * * *
155177 AAATTTTTC-AAAG--TACACGTAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACG--AGTTGGTGAC
* * * * *
155208 AATCTTTTC-AAAGTCCACACAAGTTGGCGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * * **
155239 -ACCATAGTC-GAAGTCCACACGAGTTAGTGGT
1 AACC-TTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
155270 AACCTTCTC-AAAGCCCATACGAGTTGATGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
155301 AACCTTTTCAAAATCCCACACGAGTTGGTGAC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * *
155333 AACCTTTT-TAGAGTCCACACAAGTTGTTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
155364 AACCTTTTCAAAAGCTCATACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
155396 AATCTTTTCAAAATCCCACATGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*
155428 AACCTTTTCAAAATCCCACACGAGTTGGT-AGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGA-C
*
155460 AACCTTTTCAAAAGCCCACACGAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * *
155492 AA-CTTCTGT-AAAAGTCCATACGAGTTGGTCG-T
1 AACCTT-T-TCAAAAGCCCACACGAGTTGGT-GAC
* * * ** *
155524 AACCTTTTCAAAA-CCTAAACGAGATATTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * * * * *
155555 AACCTTTTTAAAAGCCTATAGGAATTGGCGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* **
155587 AACCTTTTCAAAAGCCCACACGAATTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
*** * *
155619 AACCTTTTC-AAAGCCCACTTAATTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * **
155650 AACCGTTTCAAAAGCCTA-ACGTGTTGGTGGT
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* *
155681 AACCTTTTC-AAAGTCTACACGAGTTGGT-AC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
** * * *
155711 AATATTTTAAAAAGCCCACACAAGTTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
* * * *
155743 AAACTTTTCAAAA-TCCACACGAATTGGTGGC
1 AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
155774 AAC
1 AAC
155777 TTACGAGTTA
Statistics
Matches: 15325, Mismatches: 4593, Indels: 2389
0.69 0.21 0.11
Matches are distributed among these distances:
21 1 0.00
22 5 0.00
23 18 0.00
24 24 0.00
25 6 0.00
26 5 0.00
27 17 0.00
28 59 0.00
29 63 0.00
30 448 0.03
31 5439 0.35
32 8223 0.54
33 308 0.02
34 26 0.00
35 21 0.00
36 11 0.00
37 15 0.00
38 49 0.00
39 85 0.01
40 372 0.02
41 16 0.00
42 3 0.00
43 15 0.00
44 15 0.00
45 8 0.00
46 5 0.00
47 16 0.00
48 25 0.00
49 10 0.00
50 4 0.00
51 3 0.00
52 10 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (32 bp):
AACCTTTTCAAAAGCCCACACGAGTTGGTGAC
Found at i:134735 original size:31 final size:31
Alignment explanation
Indices: 134633--134898 Score: 147
Period size: 31 Copynumber: 8.4 Consensus size: 31
134623 AATTATTGGT
* * *
134633 AACCTTTTCAAAAGCCCACACGAATTGGTGAC
1 AACCTTTTCAAAA-CACACATGAGTTGGTGAC
134665 AACCTTTTCAAAATCACACATGAGTTGGT-AGC
1 AACCTTTTCAAAA-CACACATGAGTTGGTGA-C
* *
134697 AATCTTTTCAAAA-ACACATAGTGTTGGTGAC
1 AACCTTTTCAAAACACACAT-GAGTTGGTGAC
*
134728 AACCTTTTCAAAGTACACACA--AGTTGTTGGA-
1 AACCTTTTCAAA--ACACACATGAGTTGGT-GAC
* * * * *
134759 AACTTTTTTAGAAGCCCACATGGGTTGGTGAC
1 AACCTTTTCA-AAACACACATGAGTTGGTGAC
* * * * *
134791 AAACTTTTTAAAATC-CACATAAGTTGTTGGC
1 AACCTTTTCAAAA-CACACATGAGTTGGTGAC
* *
134822 AACCTTTTCAAAA-AGCCCATACGAGTTGGTGGC
1 AACCTTTTCAAAACA-CACAT--GAGTTGGTGAC
* *
134855 AACCCTTTT-AAAATCCCAC-TCGAGTTGGTAAC
1 AA-CCTTTTCAAAA-CACACAT-GAGTTGGTGAC
134887 -ACCTTTTCAAAA
1 AACCTTTTCAAAA
134899 TCCCACACAA
Statistics
Matches: 183, Mismatches: 31, Indels: 41
0.72 0.12 0.16
Matches are distributed among these distances:
30 17 0.09
31 69 0.38
32 67 0.37
33 17 0.09
34 13 0.07
ACGTcount: A:0.33, C:0.22, G:0.16, T:0.29
Consensus pattern (31 bp):
AACCTTTTCAAAACACACATGAGTTGGTGAC
Found at i:134900 original size:31 final size:31
Alignment explanation
Indices: 134823--134924 Score: 102
Period size: 31 Copynumber: 3.2 Consensus size: 31
134813 GTTGTTGGCA
*
134823 ACCTTTTCAAAAAGCCCA-TACGAGTTGGTGGCAAC
1 ACCTTTTC-AAAATCCCACT-CGAGTTGGT---AAC
134858 -CCTTTT-AAAATCCCACTCGAGTTGGTAAC
1 ACCTTTTCAAAATCCCACTCGAGTTGGTAAC
* *
134887 ACCTTTTCAAAATCCCACACAAGTTGGTAAC
1 ACCTTTTCAAAATCCCACTCGAGTTGGTAAC
*
134918 ATCTTTT
1 ACCTTTT
134925 TCGATGGCCC
Statistics
Matches: 60, Mismatches: 4, Indels: 10
0.81 0.05 0.14
Matches are distributed among these distances:
29 3 0.05
30 6 0.10
31 27 0.45
32 17 0.28
33 1 0.02
34 6 0.10
ACGTcount: A:0.30, C:0.26, G:0.14, T:0.29
Consensus pattern (31 bp):
ACCTTTTCAAAATCCCACTCGAGTTGGTAAC
Found at i:135242 original size:31 final size:31
Alignment explanation
Indices: 135207--135267 Score: 106
Period size: 31 Copynumber: 2.0 Consensus size: 31
135197 GCAGCACCAT
135207 AGTCAAAGTCCACAC-AGATTGGTGGCAACAA
1 AGTCAAAGTCCACACGAG-TTGGTGGCAACAA
135238 AGTCAAAGTCCACACGAGTTGGTGGCAACA
1 AGTCAAAGTCCACACGAGTTGGTGGCAACA
135268 TTTTCAAAAG
Statistics
Matches: 29, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
31 27 0.93
32 2 0.07
ACGTcount: A:0.36, C:0.23, G:0.25, T:0.16
Consensus pattern (31 bp):
AGTCAAAGTCCACACGAGTTGGTGGCAACAA
Found at i:135726 original size:221 final size:220
Alignment explanation
Indices: 135454--135854 Score: 495
Period size: 221 Copynumber: 1.8 Consensus size: 220
135444 TTTGCATGAC
* * * *
135454 TTGGTGGCAACATTGTCAAAAGTCCACACGAGTTGGTGGCAAACTTTTC-AAAGCCTACACGAGT
1 TTGGTGGCAACATTGTCAAAAGTCCACACGAGTTGATGGCAAACATTTCAAAAGCCCACACGAAT
* * ***
135518 TGTTGGCAACCTTTTTAAAAG-CTCACACAAGTTAGTGGCAA-CTTTTACAAAAACCTACATGTG
66 TGGTGGCAACCTTTTT-AAAGTC-CACACAAGTTAGTGGCAACCTTTT-CAAAAACCCACACAAG
* * *
135581 TTGGTGGTA-ATCTTTTTAAAAGCCCACACGAGTTGGTGGTAACCTTTTTAAAGTTCACACGAGT
128 TTGGTGGTACA-C-TTTTAAAAGCCCACACGAGTTGATGGCAACCTTTTCAAAGTTCACACGAGT
135645 TTGTAGCACCATAGTCGTAGTCTACACGAG
191 TTGTAGCACCATAGTCGTAGTCTACACGAG
* * * * * * *
135675 TTGGTGGTAACATTTTTAAAAGTCTATACGAGTTGATGGTAACCATTTCAAAAGCCCACACGAAT
1 TTGGTGGCAACATTGTCAAAAGTCCACACGAGTTGATGGCAAACATTTCAAAAGCCCACACGAAT
* * * *
135740 TGGTGGCAACCTTTTTAAAGTCCATATAAGTTGGTGGCAACCTTTTCAAAAGCCCACACAAGTTG
66 TGGTGGCAACCTTTTTAAAGTCCACACAAGTTAGTGGCAACCTTTTCAAAAACCCACACAAGTTG
* *
135805 TTGGTAGCACTTTTAAAAGCCTACACGAGTTGATGGCAACCTTTTCAAAG
131 GTGGTA-CACTTTTAAAAGCCCACACGAGTTGATGGCAACCTTTTCAAAG
135855 GCCCACACGA
Statistics
Matches: 150, Mismatches: 25, Indels: 10
0.81 0.14 0.05
Matches are distributed among these distances:
221 114 0.76
222 35 0.23
223 1 0.01
ACGTcount: A:0.30, C:0.20, G:0.20, T:0.30
Consensus pattern (220 bp):
TTGGTGGCAACATTGTCAAAAGTCCACACGAGTTGATGGCAAACATTTCAAAAGCCCACACGAAT
TGGTGGCAACCTTTTTAAAGTCCACACAAGTTAGTGGCAACCTTTTCAAAAACCCACACAAGTTG
GTGGTACACTTTTAAAAGCCCACACGAGTTGATGGCAACCTTTTCAAAGTTCACACGAGTTTGTA
GCACCATAGTCGTAGTCTACACGAG
Found at i:135927 original size:253 final size:251
Alignment explanation
Indices: 135464--136042 Score: 578
Period size: 253 Copynumber: 2.3 Consensus size: 251
135454 TTGGTGGCAA
* * * *
135464 CATTGTCAAAAGTCCACACGAGTTGGTGGCAAACTTTTCAAAGCCTACACGAGTTGTTGGCAACC
1 CATT-TCAAAAGCCCACACGAGTTGGTGGCAACCTTTTTAAAGCCTACAC-AGTTGGTGGCAACC
* * * * * * *
135529 TTTTTAAAAGCTCACACAAGTTAGTGGCAACTTTTACAAAAACCTACATGTGTTGGTGGTAATCT
64 TTTTCAAAAGCCCACACAAGTTAGTGGCAACTTTTA-AAAAACCTACACGAGTTGATGGCAACCT
* * * * * *
135594 TTTTAAAAGCCCACACGAGTTGGTGGTAACCTTTTTAAAGTTCACACGAGTTTGTAGCACCATAG
128 TTTCAAAAGCCCACACGAATTGGTGGTAACCTTTTTAAAGTCCACAAGAGTTGGTAGAACCATAG
** * * * * * * **
135659 TCGTAGTCTACACGAGTTGGTGGTAACATTTTTAAAAGTCTATACGAGTTGATGGTAAC
193 TCAAAGTCCACACGAGTTGGTAGCAACATTTTTAAAAGCCCAAACGAGTTGATGACAAC
* *
135718 CATTTCAAAAGCCCACACGAATTGGTGGCAACCTTTTTAAAGTCCATATA-AGTTGGTGGCAACC
1 CATTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTTAAAG-CC-TACACAGTTGGTGGCAACC
* *
135782 TTTTCAAAAGCCCACACAAGTT-GTTGGTAGCACTTTT-AAAAGCCTACACGAGTTGATGGCAAC
64 TTTTCAAAAGCCCACACAAGTTAG-TGGCA--ACTTTTAAAAAACCTACACGAGTTGATGGCAAC
* * *
135845 CTTTTCAAAGGCCCACACGAATTGGTGGTAACCTTTTTGAAAGTCCATAAGAGTTGGTGATAACC
126 CTTTTCAAAAGCCCACACGAATTGGTGGTAACCTTTTT-AAAGTCCACAAGAGTTGGT-AGAACC
* * * * *
135910 AT-TTCAAAG-CCACACGAGTTGTTAGCAACTTTTTTAAAAGCCCAAATGAGTTGGTGACAAC
189 ATAGTCAAAGTCCACACGAGTTGGTAGCAACATTTTTAAAAGCCCAAACGAGTTGATGACAAC
** * * *
135971 TTTTTCAATAA-CCCACATGAGTTGGTGGCAACCTTTTTAAAAGACC-ACACGATTTGGTGACAA
1 CATTTCAA-AAGCCCACACGAGTTGGTGGCAACCTTTTT-AAAG-CCTACAC-AGTTGGTGGCAA
*
136034 CTTTTTCAA
62 CCTTTTCAA
136043 TGTTCACACA
Statistics
Matches: 266, Mismatches: 48, Indels: 22
0.79 0.14 0.07
Matches are distributed among these distances:
252 3 0.01
253 197 0.74
254 51 0.19
255 15 0.06
ACGTcount: A:0.31, C:0.20, G:0.19, T:0.30
Consensus pattern (251 bp):
CATTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTTAAAGCCTACACAGTTGGTGGCAACCTT
TTCAAAAGCCCACACAAGTTAGTGGCAACTTTTAAAAAACCTACACGAGTTGATGGCAACCTTTT
CAAAAGCCCACACGAATTGGTGGTAACCTTTTTAAAGTCCACAAGAGTTGGTAGAACCATAGTCA
AAGTCCACACGAGTTGGTAGCAACATTTTTAAAAGCCCAAACGAGTTGATGACAAC
Found at i:136209 original size:94 final size:94
Alignment explanation
Indices: 135458--136359 Score: 459
Period size: 94 Copynumber: 9.5 Consensus size: 94
135448 CATGACTTGG
* * * * * *
135458 TGGCAACATTGTCAAAAGTCCACACGAGTTGGTGGCAAACTTTTCAAAG-CCTACACGAGTTGTT
1 TGGCAACCTT-TCAAAAGCCCACACGAATTGGTGGCAACCTTTTCAAAGTCC-ACATGAGTTGAT
* * * *
135522 GGCAACCTTTTTAAAAGCTCACACAAGTT-A
64 GGTAACCTTTTCAAAAGCCCACACGAGTTGA
* * * * ** * * * * * *
135552 GTGGCAACTTTTACAAAAACCTACATGTGTTGGTGGTAATCTTTTTAAAAGCCCACACGAGTTGG
1 -TGGCAACCTTT-CAAAAGCCCACACGAATTGGTGGCAA-CCTTTTCAAAGTCCACATGAGTTGA
* **
135617 TGGTAACCTTTT-TAAAGTTCACACGAGTTTG-
63 TGGTAACCTTTTCAAAAGCCCACACGAG-TTGA
* * ** * * * * * * * * *
135648 TAGC-ACCATAGTC-GTAGTCTACACGAGTTGGTGGTAACATTTTTAAAAGTCTATACGAGTTGA
1 TGGCAACC-T-TTCAAAAGCCCACACGAATTGGTGGCAAC-CTTTTCAAAGTCCACATGAGTTGA
* * *
135711 TGGTAACCATTTCAAAAGCCCACACGAATTGG
63 TGGTAACCTTTTCAAAAGCCCACACGAGTTGA
** * * * * ** *
135743 TGGCAACCTTTTTAAAGTCCATA-TAAGTTGGTGGCAACCTTTTCAAAAGCCCACACAAGTTGTT
1 TGGCAACCTTTCAAAAGCCCACACGAA-TTGGTGGCAACCTTTTC-AAAGTCCACATGAGTTGAT
* *
135807 GGTAGCACTTTT-AAAAGCCTACACGAGTTGA
64 GGTAAC-CTTTTCAAAAGCCCACACGAGTTGA
* * * * * *
135838 TGGCAACCTTTTCAAAGGCCCACACGAATTGGTGGTAACCTTTTTGAAAGTCCATAAGAGTTGGT
1 TGGCAACC-TTTCAAAAGCCCACACGAATTGGTGGCAACC-TTTTCAAAGTCCACATGAGTTGAT
* * *
135903 GATAACCATTTC-AAAG-CCACACGAGTTGT
64 GGTAACCTTTTCAAAAGCCCACACGAGTTGA
* * * * * * * * ** *
135932 TAGCAACTTTTTTAAAAGCCCAAATGAGTTGGTGACAACTTTTTCAATAACCCACATGAGTTGGT
1 TGGCAAC-CTTTCAAAAGCCCACACGAATTGGTGGCAACCTTTTCAA-AGTCCACATGAGTTGAT
* * * * *
135997 GGCAACCTTTTTAAAAGACCACACGATTTGG
64 GGTAACCTTTTCAAAAGCCCACACGAGTTGA
* * * ** * ** *
136028 TGACAACTTTTTC-AATGTTCACAC-AAGTTTGTGGC-ACCATAGTCAAAGTCCACAAGAGTTGA
1 TGGCAAC-CTTTCAAAAGCCCACACGAA-TTGGTGGCAACC-TTTTCAAAGTCCACATGAGTTGA
* * ** *
136090 TGGTAACTTTTTTAAAAATCTACACGAGTTGA
63 TGGTAACCTTTTCAAAAGCCCACACGAGTTGA
* ** *
136122 TGGCAGCCAATCAAAAGCCCACACGAATTGGTGGCAACCTTTTCAAAGTCCATATGAGTTGATGG
1 TGGCAACCTTTCAAAAGCCCACACGAATTGGTGGCAACCTTTTCAAAGTCCACATGAGTTGATGG
* * *
136187 CAACCTTTTCGAAAGCCCACACGAGTTGT
66 TAACCTTTTCAAAAGCCCACACGAGTTGA
* * * * * *
136216 TGGTAGCCTTTTCAATAAGCCCACACGAGTTGATGGCAACCTTTTCAAAGTCCACATGAATTG-G
1 TGGCAACC-TTTCAA-AAGCCCACACGAATTGGTGGCAACCTTTTCAAAGTCCACATGAGTTGAT
* * *
136280 GCGTAACCTTTTC-ACAGCCCACACGAATTGG
64 G-GTAACCTTTTCAAAAGCCCACACGAGTTGA
* * * ** * *
136311 GGGCAATCTTTTC-AAAGCCCACACGAGTTAATGGTAACCCTTTCAAAGT
1 TGGCAA-CCTTTCAAAAGCCCACACGAATTGGTGGCAACCTTTTCAAAGT
136360 TTACACAAGT
Statistics
Matches: 616, Mismatches: 159, Indels: 66
0.73 0.19 0.08
Matches are distributed among these distances:
93 41 0.07
94 233 0.38
95 181 0.29
96 153 0.25
97 8 0.01
ACGTcount: A:0.30, C:0.21, G:0.20, T:0.28
Consensus pattern (94 bp):
TGGCAACCTTTCAAAAGCCCACACGAATTGGTGGCAACCTTTTCAAAGTCCACATGAGTTGATGG
TAACCTTTTCAAAAGCCCACACGAGTTGA
Found at i:136672 original size:63 final size:62
Alignment explanation
Indices: 136397--155068 Score: 3778
Period size: 63 Copynumber: 295.0 Consensus size: 62
136387 AAGTCTAACA
* * * *
136397 TTTTCAAAAACCCACACGAGTTCGTGGCAA-CTTTTCAAAGTCCACACAAGTTGTTGGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * **
136459 TTTTCAAAAGCCCACAAGAGTTGGCGGAAACCTTTTCAAAATCCTACACGAGTTTATGGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-C-ACACGAGTTGGTGGCAACT
** * * * * * *
136522 ATTTTCAAAAGCCTGCACGAGTTGGTAGCAACCTTTTGAAAGGCCCAAACGAGTTGGTGGTAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
* * * * *
136587 TTTTCAAAAGTCCACCCAAGTTGGTGGCAACCTTTTCAAAGCTCATACGAGTTGTTGGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * * * * *
136650 TTTTCAAAAGCTCACATGAGTTGGTGACAACTTTTTTAAAATGCACACGAGTTGGTGGGAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAA-CT
* * * * * * * * *
136714 TTTT-AAAAGCCTACATGAGTTAGTGGTAACCTTTTCAAGGTTCACACAAGTTTGTGGCATCG
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
** * * * * * *
136776 TAGTC-AAAGTCCACATGAGTTGGCGGTAACATTTTCAAATGTCTACACGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-GTC-ACACGAGTTGGTGGCAACT
* * * * * * * *
136839 TTTTCAAAAGCCCACCCGACTTGTTGGCAACTTTTTTAAAGTCCATATGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * *
136902 TTTTCAAAAGCCCATACGAGTTGTTGGCAGCCTTTTTAAAATCCTACACGAGTTGATGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-C-ACACGAGTTGGTGGCAACT
* * * * * *
136966 TTTTC-AAAGCCCAAAAGAGTTAAG-GGCAACCCTTTCAAAGCCCACACGAATTGAG-GGCAACC
1 TTTTCAAAAGCCCACACGAGTT-GGTGGCAACCTTTTCAAAG-TCACACGAGTTG-GTGGCAA-C
137028 T
62 T
* * *
137029 TTTT--AAAGCCCACACGAGTTTGTGGTAACCTTTTCAAAGTTCACACGAGTTTGTGGCACCAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCA--ACT
** * ** * ** ** ** ** *
137091 AGTT--AAAGTCCA-AC-A-TTTTTAG-AAGCCCTTACCAGTTGGTGGCA-GCCTT--T-TCAAA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAA--CCTTTTCA--AAGTCACACGAGTTGGTGGC-AA
*
137146 GT
61 CT
* * * * *
137148 CTAT-AAAAG----------TTGGTGGC-A-CTATAGTGAAAGTCCACACGAGTTGGTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCT-T-TTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * *
137200 TTCTCAAAAGCTCACATGAGTTGATGGCAACCTTTTCAAAGGCCCACACGAGTTGGTAGCAGCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
* * * * * **
137264 TTTTC-AAAGTCCACACAAGTTGTTGGTAATCTTTTCAAAAGCTCACATAAGTTGGTGGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
** * * * * * * *
137327 TTTTCAAAATTCAACACGAGTTGGCGGCAAACTTTT-AAAATCCCACATGAGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * * ** * * *
137390 TTTTCAAAAGCCTATACAAGTGGGTGGTAAGGTTTACAAATGGCCACACGAGTTGGTGGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA--GTCACACGAGTTGGTGGCAACT
* * * * * * * * *
137454 TTTTC-AAAGCCCAAACAAGTTGTTGGTAACCTTTTCAAAAGCCAATAGGAGTAGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
*** * *
137517 TTTTCAAAAATACACACGAGTTGGTGGCAA-CTATTTCAAAGTCCACATGAGTTGATGGCAAGC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCT-TTTCAAAGT-CACACGAGTTGGTGGCAA-CT
* * * * * *
137580 -TTTCAAAAGTCCACAAGAGTTGGTGGCAACCTTTTAAAAGTCTACAAGAGTTAGTTGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* ** * * * * * * *
137642 GTTTCAAAAGCTTACACGAGTTAGCGGCAA-CTTTTACAATGTCTACACCAATTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * *
137705 TTTTCACAAGTCCACATGAGTTGGTGGTAACCTTTTCAAAAGTTTACAAGAGTTGGTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * * * * * * *
137769 GTTTCAAAAGCCTATACGAGTTAGTGACAACTTTTTCGAAGTCCACACTAGTTGTTGGAAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * *
137832 TTTTCAAAAGTCCACACGAGTTTGTGGCAAACTTTTCAAAATCCCACACAAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * * * *
137896 TTTTCAAAATCCCACACAAGTTCGTAGCAACCTTTTCAAAGGCCCACATGAGTTGGTGGTAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAA-CT
** * * * * * * *
137961 TTTT-AAAAATCAACCCGAGTCT-GTGGCAAACTTTTTAAAAGCTCGCATGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGT-TGGTGGC-AACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
** * * * ** * ***
138024 TTTTC-AAAGTTCACACGAGTT--T-GTATCATAGTCAAAGTC-CAAC-A-TT-TTTAAAAGCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCAC-ACGAGTTGGTGGCAA-CT
**** *** ** * ** * * ** * *
138080 CACACGAGTTGGTGGCA-AC--CTT--TTCCAAGTCTATAAAAATTGGT-AGCACCA--TAGT--
1 TTTTC-A-AAAG-CCCACACGAGTTGGTGGCAA-CCTTTTCAAA---GTCA-CACGAGTTGGTGG
138135 CAA--
58 CAACT
** * * *** ** *** *** * ** * *** *
138138 -AGTCCAAA---CA-A-GTTGCTT-GCAAC-ATTTTCAAAAGCCCATATAACTTGAAAGCAACC
1 TTTTCAAAAGCCCACACG-AG-TTGGTGGCAACCTTTTCAAAGTCACACGAGTTGGTGGCAACT
* * * * * * *
138194 TTTTCAAAAGCCCACACGAGTTGGTGTCAGCCATTTTTAAAACTCACACAAGTTGATGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC--TTTTCAAAGTCACACGAGTTGGTGGCAACT
* ** *
138258 TTTTC-AATGTGCACACGAGTTGGTGGCAACCTTTTCAAAAGCCGAAAGGCCCACAAGAGTTGGT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC---A----CAC--GAGTTGGT
*
138322 GGTAACCT
56 GGCAA-CT
* * * * * * * * *
138330 TTTT-AAAAGTCTACGA-GAGTTGGTGGCAAGCTTTTCAAAAGCCCACAAGAGTTAGTGACCACC
1 TTTTCAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * * * * *
138393 TTTT-GAAAGTCAACACAAGTTGTTGGTAACCTTTTCAAAAACG-CACACGAGTTAGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC--AAA-GTCACACGAGTTGGTGGCAACT
* * * * * ** * * * *
138456 TTTTCAAAATCGCAAACAAGTT-GTAGCAACCTTTTCAAAAACCCATAGAGTTGGTGACAAATT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCACA-CGAGTTGGTGGC-AACT
* * * * * * * * ** *
138519 TTTTC-AAAGTCAACACAAGTTGTTGGAAACTTTTTGAAAAGCCCACACGAGTTGGTTACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAG-TCACACGAGTTGGTGGCAACT
* * * ** * * * *
138582 TTTTC-AAAGTCTACACGAGTTAGTGGCAACCTTTTCAAAACCCCATAGGAGTTAGG-GGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAA-GTCACACGAGTT-GGTGGCAACT
* * *** * * * *
138645 TTTTCAAAATCCCACACGAGTTCGTAATAACCTTTTTAAAGGCCCACACGAGTTGGTAGTAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAA-CT
* * * * * * *
138710 TTTT-AAAAGCCCACACGAGTTGGAGGCAAGCATTGTAAAAGTCCACGCGAGTTGGTGGTAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAA-CCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * *
138773 TTTTC-AATGCCCAAACGAGTTGTTGTCAACCTTTTCAAAAGCTCATAGGAGATGGTGGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * ** * * ** * * *
138836 TTTAC-ACAGTTCGCAC--GTT-GTGGC-ACAATAGTCAAAGTCCATATGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCAAAGT-CACACGAGTTGGTGGCAACT
** * ** * *
138895 TTTTCAAAAATCCACATGAGTTATTGGTAA-CTATTTCAAAGTCCACACGAGTTAGTGGCAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCT-TTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * ** * * * * *
138957 CTCTCAAAAGTCCACAAAAGTTGGTGACAATCGTTTTAAAAGCCCAAAAGGTCACACAAATTGGG
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAA-CCTTTT-------C-AAA-GTCACACGAGTTGGT
**
139022 GGCAAAAA
56 GGC-AACT
* * * *
139030 TTTT--AAAGTCCACGA-GAGTTGGTAGCAACCTTTTCAAAAGTCTACAAGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * *
139092 TTTTCAAAATCTCACACAAGTTGGAGGCAACCTTTTCAAAATCCCACACAAGTTAGTAGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
** * * * * * *
139156 AGTTCAAAAGCCCACACAAGTTGGGGGTAACCTTTTCAAAAGTCCACACGAGTTGATGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * * * * ** *
139220 TTTTC-AAAGCCCACATGAGTCGTTGGCAACATTTTCAAAAGGCCACACGAGTTTATGGCGACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAA-GTCACACGAGTTGGTGGCAACT
* * * * * * * * *
139283 TTTTAAAAAACACACACAAGTTGGTGGCAACCTTTTTGAAAGCCCACACGAGTTAGCGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * * ** * *
139347 TTTTC-AAAGTCCACACGAGTTAGG-GACATCCTTTTCAAAGCCTACATAAGTTAG-GGCAACC
1 TTTTCAAAAGCCCACACGAGTT-GGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* ** * * *
139408 TTTTC-AAAGCCCATACGAGTTATTAGTAACCTTTTCAAAGTTCACACGAGTTGGTGG-AAAT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * ** * * ** * *
139469 CTTTTAAAAAACCCAAACTTGTTGGTGCCAACCTTTTCAATGTCCACACGAGTTAATAGCAACA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * *
139533 TTTTCAAAAGCTCACATGAGTTGGTGGTAACCTTTTTAAAGGCCCTCACGAGTTGGTGGTAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
* * * * * * *
139597 ATTTC-AAAGTCCACAGGAGTCGATAGCAA-CTTTTCAAAAGCCAAAAGCCCACATGAGTTGGTG
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC---A---CAC--GAGTTGGTG
*
139660 GCAACC
57 GCAACT
* * * * * * * * * * *
139666 TTTTAAAAAGTCTACGA-GAGTTGGTCGTAACATTTTCAAAAGCCCAAATGAGTTGGTGACAACC
1 TTTTCAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* ** ** * *
139730 TTTTC-AAAGTCCACATAAGTTATTGGCAACCTTTTCAAAAGCTCACACAAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * *
139793 TTTTCAAAATCCCGCATGAGTTGGTAGCAACCTTTTCAAAAGCTCACACGAGTTGGTGACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * * *
139857 TTTTC-AAAGTCCACACAAGTTGTTGGCAACATTTTTGAAAGTCCACACGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * *
139920 TTTTC-AAAGCCTACACGAGTTGTTGGCAACCTTTTTAAAAGCTCACACGAGTTCGTGGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * * * * * * * * *
139982 TTTTACAAAAACCAACATGAATTGGTGGTAACCTTTTTAAAAGCCCACAAGAGTTAGTGGTAACC
1 TTTT-CAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAG-TCACACGAGTTGGTGGCAACT
* ** * ** * * * *
140047 TTTAC-AAAGTTCACACGAGTTTGTGGC-ACCATAGTCAGAGTTTACATC-AGTTGGTAGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAG-TCACA-CGAGTTGGTGGCAACT
* * * * * * *
140109 TTTTCAAAAGCCTACAAGTGTTGGTGGTAACCTTTTCAAAAGCCCACACAAGTTGGTGGCAACCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAA-CT
* * * *
140174 TTTT--AAAGTCCACACGAGTTGATGGCAACC-TTTCAAAAGTCTACAAGAGTTGGT-GCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * ** * * *
140234 TTTTCAAAAGCCCACAAGAGTTAGAAGTAA-CTATTTTAATGTCCACACGAGTTGGTGGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCT-TTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * **
140296 CTTTTGAAAAGTCTACAAGAATTGGTGGTAACCTTTTCAAAAACG-CACACGAGTTGGTAACAAC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC--AAA-GTCACACGAGTTGGTGGCAA-
*
140360 CA
61 CT
* ** * * * *
140362 TTTT--AAAGTCTGCACCAGTTGTTGGCAACCTTTTAAAAAGCTCACACGAGTTGGTGACAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAG-TCACACGAGTTGGTGGCAACT
* * * * * * * *
140424 TTTTCAAAATCTCGCACGAGTTGGTGGTAACCTTTTCAAAATCGCACACGTGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * *
140488 TTTTCAATAGCCTACACGAGTTTGTGGTAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAA-CT
* * * * *
140553 TTTT--AAAGCCCACGCGAGTTGTTGGCAACCTTTTAAAATGTCCACACGAGTTGGTGACAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-GT-CACACGAGTTGGTGGCAACT
* * * * * *
140615 TTTTCAAAACCCCACACGGGTTGGTAGCAACCTTTTCAAAACTCTACATGAGTTGGTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * *
140679 ATTTC-AAAGTCCATA-GAAGTTGATGGCAACC-TTTCAAATGTCCATAAGAGTTGGTGGCATCC
1 TTTTCAAAAGCCCACACG-AGTTGGTGGCAACCTTTTCAAA-GT-CACACGAGTTGGTGGCAACT
* * * * * * * *
140741 TTTTCAAAAGCCTAGAAGCCCACAAGAATTGGTGGCAACCATTTCAAAGACCATACAAGTTAGTA
1 TTTTC---A----A-AAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTG
*
140806 GTAACCT
57 GCAA-CT
** * ** * ** * * * * *
140813 TTTT-AAAATTCTACAATAATTGGCAGCAACCTTTTCAAAAGCCCACCCGAGTTAGTGACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* ** * * ** * * * * * *
140876 TTTTC-AAAGTCTTCACAAGTTGTTGGCAACCTTTGAAAAGCCTACATGAGTTAGTCGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * *
140938 TTTTCAAAATG-CCACACGAGTTAGTGGCAACTTTTTAAAATTCCTATACAAGTTGGTAGCAACC
1 TTTTCAAAA-GCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-C-ACACGAGTTGGTGGCAACT
* * * * * *
141002 TTTTCAAAGGCCCACACGAGTTGGTGGTAACATTTTAAAAAATCTACACGAGTTAGTGGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGTC-ACACGAGTTGGTGGCAA-CT
** * * * *
141067 TTTT-AAAAGCCCACACGAGTTGGTGTTAACTTTTTCAAAATCGCACACGAGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * ** ***
141130 TTTTCAAAAACCCATA-GAGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTATTAAAAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* ** * ** * * * * *
141192 TTTTCTAAAGCAAACACGTGTTGGTGAAAACCTTTTCAAAGTCCGCACAAGTTGGTAGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
*** * ** * * * * ** * *
141255 TTTTCAAAAGGTGACCCGAGTTGGTGGCAAATTTTTCAAAATCTCACTCCAGCTCATGGCACCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAA-GTCACACGAGTTGGTGGCAACT
* * * * * * ** * * ** * * * *
141319 GTTCCAAAATCCAACATGAGTTGGTAGCATGCTTTTCAAAGGCCTTCATTACTTAGTAGTAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-GTC-ACACGAGTTGGTGGCAA-CT
* * * * * * * * *
141384 TTTT-AAAA-CCCATAAGAGTTGGTGGCAACCTTTGCAAAAGTCCATATGAATTTGTGGTAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * *
141446 TTTTC-AAAGCCCAAACGAGTCGTTGGCAATCTTTTCAAGAGCCCACAGGAGTTGGGGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA-AG-TCACACGAGTTGGTGGCAACT
* * ** * * ** * * **** * *
141509 TTTAC-AATGTTCACATGAGTTTGTGGC-ACCATAGTCAAAG-CCCACATAGTCAAAGCCCACAT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCACAC-GAGTTGGTGGCAAC-T
** *** * * * ** *** * *** ** * ** *
141571 GAGTT--GGTG-GCA-AC--CTT--T-TCAAAAATCCACACAAGTTATTGGGAACT-ATTTCAAA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGC-AACCTTTTCA-AAGTCA-CACGAGTTGGTGGCAAC
*
141626 G
62 T
*** ** *** ** * * ** * *** ** *
141627 TCCACACGAGTTGATGGCAACCTT--T--CAA-AATTCCACAAG--AGTTG-G-TGGTAACTA-T
1 TTTTCAAAAGCCCA-CACGA-GTTGGTGGCAACCTTTTCA-AAGTCACACGAGTTGGTGGCAACT
* ** * *** ** *
141682 TTTAAAAGCCCAAAAGGTCACACGAATTGGTGGCAAAAATTT-ATTGTCCACGCGAGTTGGTGGC
1 TTT------TCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGC
*
141746 AACC
59 AACT
* * * * * ** *
141750 TTTTAAAAAGTCTACAAGAGTTGGTGGTAACCTTTTCAAAAG-C-C-C-ATGTTGGTAACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCACACGA-GTTGGTGGCAACT
* * ** * ** * * *
141810 TTTTC-ATAGTCTGCACAAGTTATTGGCAACCTTTTCAAAAG-CCCACAGAGTTGCTGACAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCACAC-GAGTTGGTGGCAACT
* * * * * * * * *
141872 TTATT-AAAATCTCGCACGAGTTGGTGGTAACCTTTTCAAAATCTCACATGTGTTGGTAGCTACA
1 TT-TTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAA-GTCACACGAGTTGGTGGCAAC-
141936 T
62 T
* * * * * * *
141937 TTTT-GAAGGCCTACACGAGTTTGTGGTAACCTTTTCAAAAGTCCATACGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * * * * ** *
142000 TTTTC-AAAGCCCACGCGAGTTGTTGGCAACCTTTTAAAAAGTCCACATGAGTTGGCGATAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGT-CACACGAGTTGGTGGCAACT
* ** * * * *
142063 TTTTCCAAAGCCCACTTGAGTTGGTAGCAAACTTTTCAAAAGT-AGGCACGAGTTGGTCGCAGCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCA--CACGAGTTGGTGGCAACT
** * * * * * **
142127 TTTTTTAAAGCCCACATGAGTTGATGTCAACTTTTTCAAAGTCTACATGAGAAGGTGGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAA-CT
* * * * ** *
142191 TTTCAAAAGTCCAAAAGCCCACACAAGTTGGAGGCAACCATTTCAGAGTTTGCATGAGTTGGTGG
1 TTT------T-CAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGG
*
142256 CAACA
58 CAACT
* * * * *
142261 TTTTCAAAA-CTCTACGA-GAGTTGGTCGTAACCTTTTCAAAAGCCCACACAAGTTGGTGGCAAC
1 TTTTCAAAAGC-CCAC-ACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAAC
142324 T
62 T
* * ** * * * * * *
142325 TTTTC-AAAGTCTACATAAGTTGTTGGCAACCTTTTCAAAAGCTCACACAAATTGATGACAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* ** ** *** * * * *
142388 TTTTCAAAATCCTGCATAAGTTGGCAACAACCTTTTCAAAAGCTAACATGAGTTGGTGACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* ** * * * * *
142452 ATTTC-AAAGTGCACACAAGTTGTTGGCAACATTTTCAAAAGTTCACACGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * *
142515 TTTTC-AAAGCCTACACGAGTTGTTGGCAACATTTTTAAAAGCTCACACGAGTTGATGGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * * * * **
142578 TTTACAAAAACCCACACGAGTTAGTGGCAACCTTTTGAAAAGCCACACGAGTTAGTGATAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGTCACACGAGTTGGTGGCAACT
* ** * * * * * * * *
142641 TTTTCAAAATCCGGCATGAGTTGGGGGTAACCTTTTGAAAATCCCACACGTGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * * * * * *
142705 TTTTCAAAGGCCTACACAAGTTTGTGGTAA-CTTATTCAAAAGTCCACACAAGTTGCTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTT-TTC-AAAGT-CACACGAGTTGGTGGCAACT
* ** * * * * *
142769 TTTTC-AAAGCCTATGCGAGTTGTTAGAAACCTTTTAAAAAGTCCACACGAGTTGGTGGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGT-CACACGAGTTGGTGGCAACT
* * * * *
142832 TTTTCAAAAACCCACACGAGTTGGTAGCAACCTTTTCAAAACTCTACATGAGTTGGTGGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * *
142896 ATTTT--AAAGTCTATAAGAGTTGATGCCAACC-TTTCAAAAGTCTACAAGAGTTGGTGGCAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * *
142958 TTTTCAAAAGCCTAAAAGCTCACACGAATTGGTGGCAACCATTTCAAAGTCCACACGAGTTAGTG
1 TTTTCAAAAG-C------C-CACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTG
**
143023 ATAACCT
57 GCAA-CT
** * ** * * * * *
143030 TTTT-AAAATTCTACAATAGTTGTTGGCAACCTTTTCAAAAGCGCACCCGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * ** * * * ** *
143093 TTTTC-AAAGTCTACATAAGTTGTTGGCAACCTTTTCAAAAGCCCAAACGAGTTGGTGATAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * *
143156 TTTTCAAAATCCCACACGAGTTGGTGGCAACCTTTT-AAAATCCTACCCGAGTTGGTAGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-C-ACACGAGTTGGTGGCAACT
* * * * * *
143219 ATTTCAAAGGCCCAAACGAGTTGGTGGTAACATTTTCAAAAATCCACACGAGTTGGTGGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAA-CT
* * * * * *
143284 TTTT-AAAAGCCCACATGAGTTGGTGGTAACCTTTTCAAAGTTCACATGAGTTTGTGGCACCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
** * * * * ** * *** * * *
143346 TAGTC-AAAGTCTA-AC-ATTTTCAGAAGC-TCGCATTAGTT-GGTGGCA-AC--CTT--T-TCA
1 TTTTCAAAAGCCCACACGA-GTT-GGTGGCAAC-C-TT--TTCAAAGTCACACGAGTTGGTGGC-
*
143400 AAGT
59 AACT
* * **** * * ** * ***
143404 CTAT-AAAAGTTGGTGGCACCA--TAGT--CAA---AGTC-CA--CACGA-GTTAG-TGGCAAC-
1 TTTTCAAAA---GCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCAC-ACG--AGTTGGTGGCA
*
143455 ATT
60 ACT
*** *** * * * * ** * * *** *** * * *
143458 TTCAAAAGCCCACATGA-GTTGATGAG-AACCA-TTTCAAAAGCCCATACGAGTTGGTAGCAGTC
1 TTTTCAAAAGCCCA-CACG-AGTTG-GTGGCAACCTTTTCAAAGTCACACGAGTTGGTGGCA-AC
143520 T
62 T
* * ** *
143521 TATTT--AAAGCCCACATGCA-TTGATGGTGACCTTTTCAAAGTCCATAC-ATGTTGGTGGCAAC
1 T-TTTCAAAAGCCCACACG-AGTTGGTGGCAACCTTTTCAAAGT-CACACGA-GTTGGTGGCAAC
*
143582 A
62 T
* * **** ** * *
143583 TTTTCAAAAGCCCACGCGAGTTAGAAAAAACCTTTTCAAAGTCAACATAAGTTGCTAGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * *
143645 CTTTTCAAAAGCTCACAGGATTTGTTGGCAACCTTTTCAAAATCATACACGAGTTAGTAGCAA-T
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC--ACACGAGTTGGTGGCAACT
* * * * *
143709 CTTTTCAAAAACCCACA-GTGTTGGTGAG-AACCTTTTCAAAGTCCACACAAGTTGTTGGAAACT
1 -TTTTCAAAAGCCCACACGAGTTGGTG-GCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * *
143772 TTTTCAAAAGCCCACACGGGTTGGTGACAACGTTTTCAAAATCCACACAAGTTGTTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * *
143835 TTTTCAAAAGCCTACACGAGTTGGTGGCAACCCTTTT-AAAATCCCACTAGAGTTGGT--AATAC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAA-CCTTTTCAAAGTCACAC--GAGTTGGTGGCA-AC
*
143897 C
62 T
* *** * * * * * *
143898 TTTTCAAAATCCCACACGAGTTGGTAAAAACCATTTCTAAGGCCCACACGAGTTGGTGGTGACCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGG-CAACT
* * * * * **
143963 TTTT-AAAGGGCCACACGAGTTGGTGGCACCCTTTGCAAAAGTCCACACGAGTTGGTGACAAGA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * * * * *
144026 TTTTC-AAAGCCTAAAC-ACGTTGTTGGCAACTTTTTCAAAAG-CCCACTAGAGTTGTTGGCAAC
1 TTTTCAAAAGCCCACACGA-GTTGGTGGCAACCTTTTC-AAAGTCACAC--GAGTTGGTGGCAAC
*
144088 C
62 T
* ** * ** ** * *
144089 TTTAC-AAAGTTCACATGAGTTTATGGC-ACCATAGTCAAAATCCACACGAGTTGG-GTGTAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGT-CACACGAGTTGGTG-GCAACT
* * * * * * ** * *
144150 ATTTTCAAAAGCCGACACGAGTTGCTGGTAACCTTTTTAAAGTCTATACAAGTTGGCAGCACCA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
*** * **** * * *
144214 CAATC-AAAGTCCACACGAGTTGGTGGCAACAAAGTCAAAGTCCACACAAGTTGGCGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * ** *
144276 TTTTCCAAAGCCCACATGAGTTGGTAGCAACCTTTTCAAAAG-CAGACACGAGTTGGACGCAGCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC--ACACGAGTTGGTGGCAACT
*** * * * * *
144340 TTTTTTTAAGCCCACACGAGTTGATGTCAATCTTTTCAAAGCACACACGAGATGGTGGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAA-CT
* * ** * **
144404 TTTCAAAGGTCTAAAAGCCCACACAAGTTGGAGATAACCATTTCAAAGTTTGCACGAGTTGGTGG
1 TTT------TC-AAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGG
144469 CAA-T
58 CAACT
* * * * * * *
144473 ATGTTCAAAAGTCTACGA-GAGTTGGTCGCAACCTTTTCAAAAGCCCAAACGAGTTGGTGACAAC
1 -TTTTCAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAAC
144537 T
62 T
* ** * *
144538 TTTTC-AAAGTCCACTA--AGTTATTGGCAACCTTTTCAAAAGCTCACA-AAGTTGGTGGCAACC
1 TTTTCAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * * * *
144599 CTTTCAAAATCTCACATGAGTTGGTAGCAACCTTTTTGAAAGCTCACACGAGTTGGTGACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * * *
144663 TTTTC-AAAGTCCACACAAGTTGTTGGCAACATTTTCAAAAGTCCACACGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * *
144726 TTTTC-AAAGCCTACACAAGTTGTTAGCAACCTTTTTAAAAGCTCTCATGAGTTGGTGGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * ** * * *
144789 TTTACAAAAACCCACACGAGTTGGTGGCAACCTTTTCAAAGTTCACACGAGTTTATGGTACCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
** * * *** * * * * * *
144852 TAGTC-AAAGTCTACACGAGTTGGTAATAATCTTTCCAAAAGCCTACACGTGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * * *
144915 ATTTCAAAAGCCCACACGAATTGGTGGCAACCATTTCAAAAGT----C---TTGATGGCAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCACACGAGTTGGTGGCAACT
* *** * ** * *
144970 CTTTCAAAAGTATACAAGAGTCAGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TC---A---CAC--GAGTTGGT
* *
145035 AGTAACT
56 GGCAACT
* * * * *
145042 ATTTCAAAATG--CACATGAGTTGGCGGCAACC-TTTCGAAAAGTCTACAAGAGTTGGTGGTAAC
1 TTTTCAAAA-GCCCACACGAGTTGGTGGCAACCTTTTC--AAAGTC-ACACGAGTTGGTGGCAAC
*
145104 C
62 T
* * * ** * * *
145105 CTTTCCAAAGGCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * *
145168 TTTTGAGAAGCCCACATGAGTTGGTGACAA-CTTTGTCAAAATCCCACACGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTT-TCAAAGT--CACACGAGTTGGTGGCAACT
* * * * * *
145232 TTTTCAAAATCCCACACGTA-TTGGTAGCTACTTTTTCAAAGGCCTACACGAGCTT-GTGGTAAC
1 TTTTCAAAAGCCCACACG-AGTTGGTGGCAACCTTTTCAAA-GTC-ACACGAG-TTGGTGGCAAC
*
145295 C
62 T
* * * * * * ** * * * *
145296 TTTTCAATAGTCCGCACAAGTTGGTGGCAATCTTTTCAAAGCCGATGCGAGTTGTTAGCCACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * ** *
145359 TTTTAAAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC--AAAGTCACACGAGTTGGTGGCAACT
* * ** * * * * * *
145423 TTTTAAAAATCTTATACCAGTTGGTAGCAACCTTTTTAGAAGGTCACACTAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA-AA-GTCACACGAGTTGGTGGCAACT
* * * ** ** * *
145487 TTTTC-AAAGTCTATAAAAGTTGGTGGC-ACCATAGTCAAAGTCCACACGAGTTAGTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * *
145549 TTTTCAAAAGCCCACATGAGTTGATAGG-AA-TTATTTCAAAAGCCCACACGAGTTGGTAGCAGC
1 TTTTCAAAAGCCCACACGAGTTGGT-GGCAACCT-TTTC-AAAG-TCACACGAGTTGGTGGCA-A
145612 CT
61 CT
* * * * * * *
145614 TATTT--AAAGTCCACACGCGTTGATGGCAACCTTTTCAAAGTCCACATGTGTTAGTGGCACCCT
1 T-TTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCA-ACT
** * * * * *
145677 TTCAAAAGCCTAAAAGCCCATAAGATTTTGTGGTAACCTTTTCAAAAGTCTACGA-GAGTTGGTG
1 TT-----TTC-AAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-AC-ACGAGTTGGTG
*
145741 GCAACC
57 GCAACT
*** * * ** * * ** * *
145747 TTTTCAAAAGCCCATGTGAGCTAGTAACAACATTTTCAAAGTCAATATAAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * ** *
145810 TTTTCAAAATCCCACACTAGTTGGTGGCAACCTTTTCAAAATCGCACATGAGTTACTAGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * ** *
145873 CTTTTCAAAAACCCACA-GTGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTATTGGAAACT
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * ** * ** * *
145936 TTTTCAAAAG-CCATACGGGTTGGTGAAAACCTTTTCAAAATCCACAAAAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * ** *
145998 TTTTCAAAAGCCTACACAAGTTGGTGGCAACCTTTTTAAAATCCCACTCGAGTTGGTAAC-ACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * ** * * *
146061 ATTTCAAAATCTCACATGAGTTGGTAACAACCTTTTCTAAGGCCCACACGAGTTGGTGGTAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* ** * * * * * *
146124 CTTTTCAATAGCATACACAAGTTGGTGGTACCCTTTGCAAAAGTCCACACGAGTTGGTGGTAAGA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAA-C
146189 T
62 T
* * * *
146190 TTTT--AAAGCCCAAAC-ACGTTGTTGGCAACTTTTTCAAAAGTCCACACGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGA-GTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* ** ** ** *
146252 TTTAC-AAAGTTCACACGAGTTTATGGC-ACCATAGTCAAAGTCCACACGAGTTGG-GTGTAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGT-CACACGAGTTGGTG-GCAACT
** * * * * * * * * *
146313 ATTTTCAAAAGCCGGCACGAGTTGCTGGTAACATTTTTAAAGTCTATACAAGTTAGTGGCACCA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
** * ** * **** *
146377 TAGTC-ATAGTACACACGAATTGGTGGCAACAAAGTCAAAGTCCACACGAGTTGGTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
** * * *
146439 TTTTCAAAAGCCCACATAAGTTGGTAGCAACCTTTTCAAAAG-CAAACACGAGTTGGTCGCAGCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC--ACACGAGTTGGTGGCAACT
** * * * * * * *
146503 TTTTTTAAAGCCCACACGAGTTGATGTCAATCTTTTCAAAGCCCACACAAGTTGGAGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
* **** * * * *
146566 ATTTC-AAAGTTTGCACGAGTTGGTGGCAACATGTTCAAAAGTCTACGA-GAGTTGGTCGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-AC-ACGAGTTGGTGGCAACT
* * * * * ** *
146629 TTTTCAAAAGCCCAAATGAGTTGGTGACAACTTTTTCAAAGTC-CACTAAGTTATTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCACAC-GAGTTGGTGGCAACT
* * * * * *
146691 TTTTCAAAAGCTCACA-AAGTTGGTGGCAACCCTTTCAAAATCCCACATGAGTTGGTAGCAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAA-CT
* * * * * *
146755 TTTT-GAAAGCTCACACGAGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * *
146817 TTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAGGCCTACACAAGTTGTTAGCAACGT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAAC-T
* * * * ** *
146881 TTTT-AAAAGCTCTCATGAGTTGGTGGTAA-CTTTTACAAAAACCCACACGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-C--AAAGTCACACGAGTTGGTGGCAA-C
146944 T
62 T
* * * ** * * *
146945 TTTT-AAAAGCCCATACGAGTTGGTGGTAACCTTTTCAAAGTTCACATGAGTTTATGGTACCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
** * * *** * * * * * *
147007 TAGTC-AAAGTCTACACGAGTTGGTAATAATCTTTCCAAAAGCCTACACGTGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * * *
147070 ATTTCAAAAGCCCACACGAGTTAGTGGCAACCATTTCAAAAGT----C---TTGATGGCAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCACACGAGTTGGTGGCAACT
* * * * * * *
147125 CTTTCAAAAGTCTACAAGAGTCGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TC---A---CAC--GAGTTGGT
* *
147190 AGTAACT
56 GGCAACT
* * * * *** * *
147197 ATTTCAATATG--CATATGAGTTGCCAGCAACC-TTTCGAAAAGTCTACAAGAGTTGGTGGTAAC
1 TTTTCAA-AAGCCCACACGAGTTGGTGGCAACCTTTTC--AAAGTC-ACACGAGTTGGTGGCAA-
*
147259 CC
61 CT
* ** * ** *
147261 TTTTC-AAAGGCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTTTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * * *
147323 TTTTGAGAAGCCCACATGAGTTGGTGAC-ACCTTTGTCAAAATCCTGCACGAGTTGGTAGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTT-TCAAAGT-C-ACACGAGTTGGTGGCAACT
* * * * * * * *
147387 TTTTCAAAATCCCACAC-ATATTGGTAGCTACCTTTTCAAAGGCCTACACGAGTTTGTGGTAACC
1 TTTTCAAAAGCCCACACGA-GTTGGTGGCAACCTTTTCAAA-GTC-ACACGAGTTGGTGGCAACT
* * * * * * * * *
147451 TTTTCAAAAGTCCGCACAAGTTGGTGGTAATCTTTTCAAAG-CCCATGTGAGTTGTTAGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCACA--CGAGTTGGTGGCAACT
* ** * ** * *
147513 CTTTTAAAAAGCCCACACGAGTTGGTGATAACCTTTTTAAAAACCCACACGAGTTGGGGGCAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTT-CAAAGTCACACGAGTTGGTGGCAACT
* * * * * * * *
147578 TTTTCAAAATCCTATACGAGTTGGTAGCAACCTTTTCAAAGGCCCATACGAGTTGGTGGTAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
*** * * * * * * * *
147642 TTTTCAAAAATTCGCACGAGTTTGTGGCAACCTTTTTAAATGCCCACATGAGTTTGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
** * * ** * * ***
147706 TTTTC-AAAGTTCACAGGAGTTTGTGGC-ACCATAGTCAGAGTC-CAAC-A-TT-TTCAAAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCAC-ACGAGTTGGTGGCAACT
* ** * ****** * * * ** * * * ** *
147763 GTCACACAAGTTGGTGGCAACCTT--T-TCAAAGTCTATAAAAGT----TG-G-TGG-CACCA-T
1 TTTTCAAAAG-CCCACACGA-GTTGGTGGCAACCT-TTTCAAAGTCACACGAGTTGGTGGCAACT
** ** *** * *** ** *** *** ** **
147817 AGTCAAAGTCCACACGA-GTTAG-TGGCAAC-ATTTTCAAAAGCCCACATTAGTTAATAGG-AAC
1 TTTTCAAAAGCCCAC-ACG--AGTTGGTGGCAACCTTTTCAAAGTCACACGAGTTGGT-GGCAAC
147878 T
62 T
* * * * * * * *
147879 ATTTCAAAAGCCCACACGAGTTGGTAGCAGCCTTATTTAAAGTCCACACGCGTTGATGGAAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTT-TTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * * *
147943 TTTTC-AAAGTCCACATGTGTTAGTGGCAACCCTTTCAAAAGCCCAAAAGCCCATAAGATTTTGT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TC---A---C--ACGAGTTGGT
* *
148007 GGTAACC
56 GGCAACT
* * * * * **
148014 TTTTCAAAAGTCTACGA-GAGTTGGTGGCAACCTTTTCAAAAG-CCCATGCGAGCTAGTAACAAC
1 TTTTCAAAAGCCCAC-ACGAGTTGGTGGCAACCTTTTC-AAAGTCACA--CGAGTTGGTGGCAAC
*
148077 A
62 T
* * ** * * * * * *
148078 TTTTC-AAAGTCAACATAAGTTGTTGGCAACTTTTTCAAAAGCCCACACTAGTTTGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * * ** * * * *
148141 TTTTCAAAATCGCACATGAGTTAGTAGCAATCTTTTCAAAAACCCACAGTGTTGGTGACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCACAC-GAGTTGGTGGCAACT
* * * ** * * * * ** *
148204 TTTTC-AATGTCCACACAAGTTATTGGAAACTTTTTCAAAAGCCCACACGGGTTGGTGAAAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * *
148267 TTTTCAAAA-TCCACACAAGTTGTTGGCAACCTTTTCAAAAGCCTACACAAGTTGGTGGCAACCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAA-CT
* * * ** * * ** *
148331 TTTT-AAAATCCTACTCGAGTTGGTAAC-ACCATTTCAAAATCTCACATC-AGTTGGTAACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAA-GTCACA-CGAGTTGGTGGCAACT
* * * * * * *
148393 TTTTCTAAGGCCCACACGAGTTGGTGGTAATCTTTTCAATAG-CATACACGAGTTGGTGGTACCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA-AGTC--ACACGAGTTGGTGGCAACT
* * ** * * * ** *
148457 TTTGCAAAAGTCCACACGAGTTGGTGGCAAGATTTTTAAAGCCCAAAC-ACGTTATTGGAAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGA-GTTGGTGGCAACT
* * * * *
148520 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTACAAAGTTCAAATGAGGTT-GTGGCACCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGA-GTTGGTGGCAACT
*** * * * ** * * * *
148583 CAGTC-AAAGTCTACACGAGTTGG-GTGTAATATTTTCAAAAGCCCACACGAGTTGCTAGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTG-GCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAA-C
148646 T
62 T
*** ** * * ** *
148647 TTTT--AAAGTTTATGCAAGTTGGCGGC-ACCATAGTCAAAGTCCACACG-GATTGGTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGT-CACACGAG-TTGGTGGCAACT
*** * * * ** * *
148708 AAGTC-AAAGTCCACACGAGTTGGTGGCAACATTTTCAAAAGCCCACATAAGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
** * * * * * * * **
148771 TTTTCAAAAGCAAACACGAGTTGGTTGTAGCTTTTTTAAAGCCTACACGAGTTGATATCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
** *
148833 CTTTTC-AAAGTTCACACGAGATT-GTGGCAACCTTTTCAAAGGTCCAAAAGCCCACACAAGTTG
1 -TTTTCAAAAGCCCACACGAG-TTGGTGGCAACCTTTTCAAA-GT---------CACACGAGTTG
*
148896 GAGGCAA-T
54 GTGGCAACT
* **** * * ** **
148904 CATTTC-AAAGTTTGCACAAGTTGATGGCAATATTTTCAAAAGTCTACGA-GAGTTGGTCACAAC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-AC-ACGAGTTGGTGGCAAC
*
148967 C
62 T
* * * * * *
148968 GTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCGAAA-TCCTACATGAGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-C-ACACGAGTTGGTGGCAACT
* * * * * *
149032 TTTTCAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-C-ACACGAGTTGGTGGCAACT
* * * * *
149096 TTTCCAAAAGCTCACACGAGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * *
149158 ATTTTCAAAAGTCTATAAGAGTTTGTGGCAACCTTTTCAAATGCTTAAAAGCCCACAAGAGTTGG
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G--T-------CACACGAGTTGG
**
149223 AAGCAACT
55 TGGCAACT
* * * * ** * * * *
149231 ATTTT--AATGTCCATACGAGTTGGTGGTAATATTTTGAAAAGTCTACAAGAGTTGGTGGTAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGTC-ACACGAGTTGGTGGCAACT
** *** * * * * *
149294 TTTTCAAAAGCTTACACGAGTTGGTAATAACCTTTTCAAAGTCTGCACAAGTTGTTAGCAATT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* ** *** * * * * * *
149357 TTTTCGAAAGCCCACTTGAGTTGGTAATAACTTTTTCAAAATCCCGCACGAGTTAGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * * * * * * *
149421 TTTTCAAAATCCCGCACGTGTTGGTAGCAACCTTTTCAAAGGCCTACATGAGTTTGTCGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-GTC-ACACGAGTTGGTGGCAACT
* * * * *
149485 TTTTCAAAAGTCGACACGAGTTGGTGGCAACCTTTTCAAAG-CCCACGTGAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCACAC--GAGTTGGTGGCAACT
* * * * * ** *
149548 ATTTAAAAAGTCCACACAAGTTAGTGGCAACCTTTTCAAAAACCCACACGAGTTGGTAGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC--AAAGTCACACGAGTTGGTGGCAACT
* * * * *
149612 TTTTCAAAA-CTCTACACGAGTTGGTGGCAA-CTATTTCAAAGTCCATAGGAATTGATGGCAAC-
1 TTTTCAAAAGC-CCACACGAGTTGGTGGCAACCT-TTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * *
149674 CTTTCAAAAGTCCACAAGAGTTGGTGGCAACCTTTTCAAAAGCCTAAAAGCCCACACGAATTGGT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG--T-------CACACGAGTTGGT
* *
149739 GGTAACC
56 GGCAACT
* * * * * * * ** * *
149746 ATTTC-AAAGTCCACACGAGTTAGTGGTAACCTTTTTAAAATTCTATAATAGTTGGTGCCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * ** * * * *
149809 TTTTCAAAAGCCCACCCGAGTTAGTGATAACCTTTTCAAAATCCACACAAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * *
149872 TTTTCACAAGCCCACACGAGTTGGTGGTAACCTTTTCAAAATCCCACTCGAGTTGGTGGGAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * * * * * * *
149936 TTTTCAAAATCCTACATGAGTTAGTAGCAACATTTTCAAAGGCTTACACGAGTTGGTGGTAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
* **** * * * * * * * * *
149999 ATTTTTAAAAATATACATGAGTTAGTGGCAACATTTTTAAAAGCCAACATGAGTTGCTAGCAACC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * ** * **
150064 TTTTCAAAGGCCCACACGAGTTGGTGGTAATATTTTCAAAAATCTACATAAGTTGGTGGCAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * ** * * *
150128 ATTTT-AAAAGCCCACATGAGTTGGTGGTAACCTTTTCAAAGTTCACACGAGTTTTTAGCACCA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
** * * * * ** * * *** * * *
150191 TAGTC-AAAGTCTA-AC-ATTTTCAGAAGCTCACATTAGTT-GGTGGCA-AC--CTT--T-TCAA
1 TTTTCAAAAGCCCACACGA-GTT-GGTGGC-AACCTT--TTCAAAGTCACACGAGTTGGTGGC-A
*
150246 AGT
60 ACT
* * * ** * * *
150249 CTAT-AAAAG-------T---TGGTGGC-ACCATAGTCAAAGTCCACACGAGTTCGTGGTAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * * * *
150301 TTTTCAAATGCCCACATGAGTTGATGGGAACCATTTCAAAAGCCCACGCGAGTTGGTAGCAGCC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * *
150365 TTATCTAAAGCCCACACGCA-TTGATTGCAACATTTTCAAAGTCCACAC-ATGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACG-AGTTGGTGGCAACCTTTTCAAAGT-CACACGA-GTTGGTGGCAACT
* * *
150428 TTTTCAAAAGCCCAAAAATCCATACGAATTGGTGGTAACCTTTTCAAAAGTCTGCGA-GAGTTGG
1 TTTTCAAAAGCCC----A--C--ACGAGTTGGTGGCAACCTTTTC-AAAGTC-AC-ACGAGTTGG
*
150492 TGGCAACC
55 TGGCAACT
* * * * *** * ** * *
150500 TTTTCAAAAGTCTACGCGAGTTAGTAATAACCTTTTCGAAGTCAACATAAGTTGTTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* *
150563 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCGCACATGAGTTGGTGGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * ** * * * * *
150626 CTTTTAAAAAACATACA-GTGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGAAACT
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * ** * * * *
150689 TTTTCAAATGCCCAGACGGGTTGGTAACAACCTTTTCAAAATCCACACAAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * **
150752 TTTTCAAAAGCCCAAACGAGTTAGTGGCAACCCTTTT-AAAGTCCCACTCAAGTTGGTAAC-ACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAA-CCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * ** * * * *
150815 ATTTCAAAATCCCACACGAGTTGGTAACAACCTTTTCCAAGGCCGACACGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * **
150879 TTTTCAAAAGCACACACGAGTTGTTGGCACCCTTTACAAAAATCCACATGAATTGGTGGCAAGA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * ** * * *
150943 TTTTC-AAAGCCCAAACAAGTTTTTGGCAACCTTTTCAAAAGCCCACAGGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* *** * ** ** *
151006 TTTAC-AAAGTTTACACAAGTTTATGGC-ACCATAGTCAAAGTCCACACGAGTTGG-GTGTAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGT-CACACGAGTTGGTG-GCAACT
** * * * * * * * * *
151067 ATTTTCAAAAGCTGACACGAGTTGCTGGAAACTTTTTTAAAGTCTATACAAGTTAGTGGCACCA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
** ** **** *
151131 TAGTC-AAAGTACACACGAGTTGGTGGCAACAAAGTCAAAGTCCACACGAGTTGGTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
*** * * * ** * *
151193 AAGTC-AAAGTCCACACGAGTTGGTGGCAACATTTTCAAAAGCCCACATAAGTTGGTAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * ** * * * * * * * * * * * *
151256 TTTACAAATGCAAAAACGAATTGGTCGCAGCTTTTTTTAAAGACCATATGAGTTGCTGTCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * **
151320 TTTTC-AAAGTCCACATGAGATGGTGGCAACCTTTTCAAAAGTCCAAAAGCCCACAGAAGTTGCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-C---A---CAC-G-AGTTGGT
*
151384 GGCAACC
56 GGCAACT
* * **** ** * *
151391 ATTTC-ATAGTTTGCACGAGTTGGTGATAACATTTTCAAAAGTCTACGA-GAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-AC-ACGAGTTGGTGGCAACT
* ** * * *
151454 TTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTCAAAGTCCACATAAATTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * *
151517 TTTTCAAAAGCTCACACAAGTTGGTGACAACCTTTTCAAAATCCCATATGAGTTGGTAGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAACT
* * ** ** * * *
151581 TTTTCCAAAGCTCACATAAGTTGGTAACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
** *
151644 TTTTCAAAAGTTCACACGAGTTGGTGGCAACCTTTTCAAA-TCCTACACGAGTTGTTGGCAACGT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-C-ACACGAGTTGGTGGCAAC-T
* * * * *
151708 TTTT-AAAAGCTCACACGAGTTGATGGTAA-CTTTTACAAAATCCCACACGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGT--CACACGAGTTGGTGGCAA-C
*
151771 A
62 T
* * *
151772 TTTT-AAAAGCCCACGCGAGTTGGTGGTAACCTTTTCAAAGCTCACACGAGTTTGTGGC-ACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
** * * * * * * * * *
151833 ATAGTC-AAAGTCTACATGAATTGGTAGTAACCTTTTCAAAAGCCTACA-TATGTTGGTGGTAAC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGA-GTTGGTGGCAAC
*
151896 C
62 T
* * *** *
151897 TTTTCAAAAGCCCACACGAGTTGTTGGCAACCATTTCAAAGTCTACACGAGTTGACAGAAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * **
151959 CTTTCAAAAGTCTACA-GAAGTTGGTGGCAACCTTTTCAAAAGCCCAAACGAGTTGGAAGCAACT
1 TTTTCAAAAGCCCACACG-AGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * * *
152023 ATTTCAATA-TCCACACGAGTTGGTGGCAACCTTTTGAAAAGTCTACAAGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * *
152086 TTTTCAAAAGCCCACACAAGTTAGTGACAACTTTTTCAAAATTCCGCACGAGTTGGTGGTAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAA-CT
*** * * * * * * *
152151 TTTT-AAAATTTCACACGTGTTGGTAGCAACCATTTCAAAGGCTTACATGAGTTTGTGGTAACCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAA-CT
* * * *
152215 TTTT-AAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-CCCACGTGATTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCACAC--GAGTTGGTGGCAACT
* * * * *
152277 GTTTAAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTTCACACAAGTTTGG-GGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAG-TTGGTGGCAACT
** * * * * * * *
152340 TAGTC-ATAGTCCACATGAGTTGGTGGTAACCTTTTCAGAAGGCTACACAAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA-AAGTC-ACACGAGTTGGTGGCAACT
** * * * * * * *
152403 TTTTCAAAAGCTTACCCGAATTGGTGGAAACTTTTTTAAAGTCCACATGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * ** * ** *
152466 TTTTCAATAA-CCTATACGAGTTGGTGGTAATTTTTTCGAAGTCTACATAAGTTGGTGGCAACC
1 TTTTCAA-AAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * *
152529 TTTTC-AAAGTCTACACAAGTTGATTGC--CCTATAGTCAAAGTCCACACGAGTAGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCT-T-TTCAAAGT-CACACGAGTTGGTGGCAACT
* * ** ** * * * * *
152591 TTTCCAGAAGCCTTCATAAGTTGGTGGTAACCTTTTCAAAGTCTATACAAGTTGGTGGCACCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * ** ** * * * ** *
152654 TATTC-AAAGTCCACACAAGTTGAAGGCAAAATTTTTAAAAGCCCGCACGAAATGGTGGTAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGC-AACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * * * * * *
152717 TTTTTAAAAGCCCACACGAGTTGGTGGCAGCCTTTTTAAATGCCCACATGACTTGATGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
* * * * * * * *
152781 TTTTC-AAAGTCTACACGAGTTGGTGGTAACTTTTTCAAAGCCTGCACGAGTTAGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * * ** * *
152843 TTGTC-AATGTCCACACAAGTTTGTGGTAATCTTTTCAAAAGTCCATACTCGTTGGGGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * * *
152906 TTTTC-AAAGTCCACACTAGTTGATGGCAGCTTTTTTAAAAGCCTACACGAGTTGATGGCAGCCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCAAAGTC-ACACGAGTTGGTGGCA-ACT
* * * * * * *
152970 TTTT-AAAAGCCTACACGAGTTGATGGCAGCCTTTTTAAAAGCCTACACGAGTTGATGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAAGTC-ACACGAGTTGGTGGCAACT
* * * * * *
153033 TTTTCAAAA-TCCGCACGAGTTGGTGGCAACCTTTTTATAGCCAACACGAGTTGGTAGCAACAT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAAC-T
*** * * * *
153096 TTTT--AAAGTATACACGAGTTGGTGGCAACCATTTCAAAAGTCCACACTAGTTGGAGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* ** * **
153158 ATTTC-AAAGTTCACACGAGTTGGT-GCTAACCTTTTCAAATGCTCATACGAGCAGGTGGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGC-AACCTTTTCAAA-G-TCACACGAGTTGGTGGCAACT
* * * * * *
153220 ATTTTC-AAAGTCTATACAAGTTGGTGGC--CCTATAGTCAAAGTCCACACGCA-TTGGTGG-TA
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCT-T-TTCAAAGT-CACACG-AGTTGGTGGCAA
*
153280 TT
61 CT
* * * * * ***
153282 ATTTTCGAAAGCCTACATGAGTTGGTGGCAACCTTTTCAAAAGCCCATACGAGTTGGTGGTTGCC
1 -TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGG-CAAC
*
153347 C
62 T
* * * * * * *
153348 TTTT-AAAAACCTACACGAGTTGATGGCAACCTTTTCAAAGTCCATAGGAGTTGGTGGTAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * *
153410 TTTTC-AAAGCACATACGAGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAA-T
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * ** * * * * * *
153471 CTTTCAAAAGCCCACACGAGTTGTTGGCTGCCTTTTTAAAAGGCCACACAAGTTGATAGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACC-TTTTCAAA-GTCACACGAGTTGGTGGCAACT
** * * * * * * * *
153535 TTTTC-AAATTCCACACAAGTTAAG-GGTAACTTTTTCAAAGCCCCTATGAGTTAGTGGCAAAC-
1 TTTTCAAAAGCCCACACGAGTT-GGTGGCAACCTTTTCAAAGTCAC-ACGAGTTGGTGGC-AACT
* * * * * * *
153597 TTTTC-AAAGTCCACATGAGCTGCTGGCAACCTTTTCAAAAG-CACAAACTAATTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCAC--ACGAGTTGGTGGCAACT
* * * * * *
153660 CTTTC-AATGTCCACACTAGTTGGTGGCAACCATTTCAAAGTCCACACGAGTTGATGGCAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * *
153721 CTTTCAAAAGCCTAAAAGAGTTGGTGGTAACCTTTTCAAAAGCCCAAATGCCCACACGAGTTGGT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG------T---CACACGAGTTGGT
* *
153786 GACAACCA
56 GGCAA-CT
* * * * ** *
153794 TTTT--AAAGTCTACACGAGTTGGTGGCAACTTTTTCAAAAGTCTACAAGAGTTATTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTC-ACACGAGTTGGTGGCAACT
* * * * * * * *
153856 TTTTC-GAAGTCCACACAAGTTGTTGGCAACTTTTTCAAAAGCCCACACGAATTGGTGGTAACAT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAAC-T
* * * * * * * * *
153920 TTTT-GAAATCCTACATGCGTTGGTGGCAAACTTTTCAAAATCTCACACGAGTTGGTGACAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAA-GTCACACGAGTTGGTGGCAACT
* * * * * * ** * * *
153983 ATTTC-AAAGTCCACTCAAGCTGTTGGCAACCTTTTCAAAAACCCACACGAGTTGCTAGCAACA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC--AAAGTCACACGAGTTGGTGGCAACT
* * * * *
154046 TTTTCAAAATCCCACACGAGTTGCTGGCAACC-TTTCAAAATCCCCCACGAGTTGGTGGTAAGC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT--CACACGAGTTGGTGGCAA-CT
* * * * * * * * *
154109 TTTACAAATGTCCACACGAGTTGGTGGCAACCTTTTGAAAGCCCAAATGAGTTGTTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-TCACACGAGTTGGTGGCAACT
* * * *
154172 TTTTCAAAAGCCCATAGGAGTTGGTGGCAACCTTTTCAAAAATC-CACAGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCACAC-GAGTTGGTGGCAACT
** * * * * * ** *
154235 TTTTCAAAAATCCACATGAATTGGTGGTAACCATTTCAAAGTCCACATGAGTTAATAGCAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
** * * * * * * *
154297 CGTTCAAAAGTCCATAAGAGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACATATGTAGGT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TC---A---CAC-GA-GTTGGT
*
154362 GG-ATACC
56 GGCA-ACT
* *** * * * *
154369 TTTTCAAAAGTCTGTAAGAGTTGGTGGCAACCTCTTCAAAAGCCCACACGAGTTGGTGACAACT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * *
154433 TTTTC-AAAGTCCACA-GAAGTTGTTGGCAACCTTTTCAAAAGCCCACATGTGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACG-AGTTGGTGGCAACCTTTTC-AAAG-TCACACGAGTTGGTGGCAACT
* * * * * * * * *
154496 TTTTCAAAATCTCGCACGAGTTCGTGGTAACCTTTTTAAAATCCACACAAGTTGGTAGCAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * ** ** * * ** * * **
154558 CTTTCGAAGGCCCACATAAGTTAATGGTAACCATTTCAAAAAACCAAATGAGTTGGTAGTAAAC-
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC--AAAGTCACACGAGTTGGT-GGCAACT
** * * * * * *
154622 TTTTCAAAAAACCACACGAGTTGGTGGTAACCTATTCAAAAATCCACACGAATTTGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAACT
* * * ** ** * **
154686 ATTTC-AAAGTCCACATGAGTTAATGGCAGTC-TTTCAAAAGTCCACAAGAGTTATTGGCAATCT
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGT-CACACGAGTTGGTGGCAA-CT
* *
154749 TTTCAAAAGCTCAAAAGCCCAAACGAGTTGGTAGCAACCTTTTCAAAAG-C-CTAGCGAGTTGGT
1 TTT-------TCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCAC-A-CGAGTTGGT
* *
154812 GGTAACC
56 GGCAACT
* * * * * * *
154819 TTTTC-AAAGTCTACACGAGTTGGTGGCAA-GTTTTCCAAAGTCTATACAAGTTGGTGGCACCA
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT-CAAAGTC-ACACGAGTTGGTGGCAACT
** * * * * * * * *
154881 TAGTC-AAAGTCCAAATGAGTTAGG-GGCAACATTTTTAGAAGCCCACAAGAGTTGGTGGCAACC
1 TTTTCAAAAGCCCACACGAGTT-GGTGGCAACCTTTTCA-AAG-TCACACGAGTTGGTGGCAACT
** * * ** * * *
154944 TTTTC-AAAGTCTAATACAAGTTGGTGGC-ACCATAGTCAAAGTCCCCACGTGTTGGTGGCAACA
1 TTTTCAAAAG-CCCACACGAGTTGGTGGCAACC-TTTTCAAAGT-CACACGAGTTGGTGGCAACT
* * * * * * * *
155007 TTTTCAAAAGCCTACATGAATTGGCGACAAACTTTTCAATGTCCACAAGAGTTGGTGGCAAC
1 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGT-CACACGAGTTGGTGGCAAC
155069 CTACAAGTTG
Statistics
Matches: 13545, Mismatches: 3960, Indels: 2209
0.69 0.20 0.11
Matches are distributed among these distances:
45 1 0.00
46 3 0.00
47 3 0.00
48 9 0.00
49 6 0.00
50 8 0.00
51 11 0.00
52 11 0.00
53 19 0.00
54 18 0.00
55 81 0.01
56 33 0.00
57 33 0.00
58 46 0.00
59 90 0.01
60 83 0.01
61 248 0.02
62 1949 0.14
63 5626 0.42
64 4073 0.30
65 248 0.02
66 29 0.00
67 10 0.00
68 8 0.00
69 31 0.00
70 87 0.01
71 542 0.04
72 219 0.02
73 20 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (62 bp):
TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAGTCACACGAGTTGGTGGCAACT
Found at i:136722 original size:126 final size:124
Alignment explanation
Indices: 136397--156494 Score: 1383
Period size: 127 Copynumber: 158.6 Consensus size: 124
136387 AAGTCTAACA
* * * * * * * * * *
136397 TTTTCAAAAACCCACACGAGTTCGTGGCAACTTTTCAAAGT-CCACACAAGTTGTTGGCAACTTT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCTACACGAGTTGGTGGCAACCTT
** * * * * **
136461 TTCAAAAGCCCACAAGAGTTGGCGGAAACCTTTTCAAAATCCTACACGAGTT-TATGGCAATA
66 TTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-C-ATACGAGTTGT-TGGCAACC
* * * * * * *
136523 TTTTCAAAAGCCTGCAC--GAGTTGGTAGCAACCTTTTGAAAGGCCCAAACGAGTTGGTGGTAAC
1 TTTTCAAAAG-CT-CACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* *
136586 CTTTTCAAAAGTCCACCCAAGTTGGTGGCAACCTTTTCAAAGCTCATACGAGTTGTTGGCAACT
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* *
136650 TTTTCAAAAGCTCACATGAGTTGGTGACAACTTTTTTAAAATGC-ACACGAGTTGGTGGGAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAAC-TTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* ** * * * * * * *
136714 TTTTAAAAGCCTACATGAGTTAGTGGTAACCTTTTCAAGGTTCACACAAGTT-TGTGGCATCG
65 TTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGT-TGGCAACC
** * * * *
136776 TAGTC-AAAG-TCCACATGAGTTGGCGGTAACATTTTCAAATGTCTACACGAGTTGGTGGCAACC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* * * * * *
136839 TTTTCAAAAGCCCACCCGACTTGTTGGCAACTTTTTTAAAGTCCATATGAGTTGGTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * *
136902 TTTTCAAAAGCCCATACGAGTTGTTGGCAGCCTTTTTAAAATCCTACACGAGTTGATGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCA-ACTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
*** * * * * * **
136967 TTTC-AAAGCCCAAAAGAGTTAAG-GGCAACCCTTTCAAAGCCCACACGAATTGAGGGCAACC
65 TTTCAAAAG-CCACCCGAGTT-GGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * * * * * * * *
137028 TTTT-TAAAGCCCACACGAGTTTGTGGTAACCTTTTCAAA-GTTCACACGAGTTTGTGGCACCAC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAGTTGGTGGCAAC-C
** * ** * * * *
137091 AGTT--AAAGTCCA-AC-A-TTTTTAG-AAGCC----C----T--TACCAGTTGGTGGCAGCC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAA-CCTTTTCAAAGTCATACGAGTTGTTGGCAACC
* ** ** * *
137138 TTTTC-AAAG-TCTATAAAAGTTGGTGGC-ACTATAGTGAAA-GTCCACACGAGTTGGTGGCAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACT-TTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * ** * * * * * *
137199 ATTCTCAAAAGCTCACATGAGTTGATGGCAACCTTTTCAAAGGCCCACACGAGTTGGTAGCAGCC
63 CTTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAA-G-TCATACGAGTTGTTGGCAACC
** * * * **
137264 TTTTC-AAAG-TCCACACAAGTTGTTGGTAATCTTTTCAAAA-GCTCACATAAGTTGGTGGCAAC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAA-CTTTTTAAAATGCT-ACACGAGTTGGTGGCAAC
* * * * * * * * * * *
137326 TTTTTCAAAATTCAACACGAGTTGGCGGCAAACTTTT-AAAATCCCACATGAGTTGGTAGCAACC
63 CTTTTCAAAA-GCCACCCGAGTTGGTGGCAACCTTTTCAAAGT--CATACGAGTTGTTGGCAACC
* * * ** * *
137390 TTTTCAAAAGCCTATACA--AGTGGGTGGTAA-GGTTTACAAATGGCCACACGAGTTGGTGGTAA
1 TTTTCAAAAG-CT-CACATGAGTTGGTGGCAACTTTTTA-AAAT-GCTACACGAGTTGGTGGCAA
* ** * * * * * * *
137452 CTTTTTC-AAAGCCCAAACAAGTTGTTGGTAACCTTTTCAAAAGCCAATAGGAGTAGGTGGCAAC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTC-ATACGAGTTGTTGGCAAC
137516 C
124 C
* * * * * * * *
137517 TTTTCAAAA-ATACACACGAGTTGGTGGCAACTATTTCAAA-GTCCACATGAGTTGATGGCAAGC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** *
137580 -TTTCAAAAGTCCACAAGAGTTGGTGGCAACCTTTTAAAAGTC-TACAAGAGTTAGTT-GCAA-C
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGTCATAC--GAGTT-GTTGGCAACC
* * * * * * * *
137641 TGTTTCAAAAGCTTACACGAGTTAGCGGCAAC-TTTTACAATGTCTACACCAATTGTTGGCAACC
1 T-TTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* ** * * * *
137705 TTTTCACAAGTCCACATGAGTTGGTGGTAACCTTTTCAAAAGT-TTACAAGAGTTGGTGGCAACA
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCATAC--GAGTTGTTGGCAACC
* * * * * ** * * * *
137769 GTTTCAAAAGC-CTATACGAGTTAGTGACAACTTTTTCGAA-GTCCACACTAGTTGTTGGAAACC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* * * * * * * *
137832 TTTTCAAAAGTCCACACGAGTTTGTGGCAAACTTTTCAAAATCCCACACAAGTTGGTGGTAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT--CATACGAGTTGTTGGCAACC
* * ** * * * * * * * *
137896 TTTTCAAAATCCCACACAAGTTCGTAGCAACCTTTTCAAAGGCCCACATGAGTTGGTGGTAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC-
* * * * * ** * *
137961 TTTTAAAAATCAACCCGAGTCT-GTGGCAAACTTTTTAAAAGCTCGCATGAGTTGGTGGCAACC
64 TTTTCAAAAGCCACCCGAGT-TGGTGGC-AACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * *
138024 TTTTC-AAAGTTCACACGAGTTTGTATCATAGTCAAAGTCCAACATTTTTAAAA-GCTCACACGA
1 TTTTCAAAAGCTCACATGAG-TTG-------GT----G-GCAAC-TTTTTAAAATGCT-ACACGA
* * **** * * ** * *
138087 GTTGGTGGCAACCTTTTC-CAAGTCTATAAAAATTGGTAGC-ACCATAGTCAAAGTCCAAACAAG
51 GTTGGTGGCAACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGT-CATACGAG
*
138150 TTGCTT-GCAACA
113 TTG-TTGGCAACC
* * * * *** * * * *
138162 TTTTCAAAAGCCCATATAACTTGAAAGCAACCTTTTCAAAA-GCCCACACGAGTTGGTGTCAGCC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* * * * * * *
138226 ATTTTTAAAA-CTCACACAAGTTGATGGCAACCTTTTCAATGTGCACACGAGTTGGTGGCAACC
64 -TTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * *
138289 TTTTCAAAAGCCGAAAGGCCCACAAGAGTTGGTGGTAACCTTTTTAAAA-GTCTACGA-GAGTTG
1 TTTTC---A----AAA-GCTCACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTAC-ACGAGTTG
* ** * * * * * *
138352 GTGGCAAGCTTTTCAAAAGCCCACAAGAGTTAGTGACCACCTTTTGAAAGTCAACACAAGTTGTT
55 GTGGCAACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTT
*
138417 GGTAACC
118 GGCAACC
* * * * * * * * *
138424 TTTTCAAAAACGCACACGAGTTAGTGGTAACCTTTTCAAAATCGC-AAACAAGTT-GTAGCAACC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAAT-GCTACACGAGTTGGTGGCAACC
* ** * ** * * * *
138487 TTTTCAAAAACC-CATAGAGTTGGTGACAAATTTTTTCAAAGTCAACACAAGTTGTTGGAAACT
64 TTTTCAAAAGCCAC-CCGAGTTGGTGGC-AACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* * * ** * * *
138550 TTTTGAAAAGCCCACACGAGTTGGTTACAACCTTTTCAAA-GTCTACACGAGTTAGTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* *** * * * ***
138614 TTTCAAAACCCCATAGGAGTTAGG-GGTAACCTTTTCAAAATCCCACACGAGTTCG-TAATAACC
65 TTTCAAAA-GCCACCCGAGTT-GGTGGCAACCTTTTCAAAGT--CATACGAGTT-GTTGGCAACC
* * * * * * * *
138677 TTTTTAAAGGCCCACACGAGTTGGTAGTAACCTTTTTAAAA-GCCCACACGAGTTGGAGGCAAGC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAA-C
* * * * * * * * *
138741 ATTGT-AAAAGTCCACGCGAGTTGGTGGTAACATTTTCAATGCCCAAACGAGTTGTTGTCAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * * * *
138804 TTTTCAAAAGCTCATAGGAGATGGTGGCAAC-TTTTACACA-G-TTCGC-ACGTT-GTGGC-ACA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTA-AAATGCTACACGA-GTTGGTGGCAAC-
* ** *** * * * * *
138863 ATAGTC-AAAGTCCATATGAGTTGGTGGCAACCTTTTCAAAAATCCACATGAGTTATTGGTAA-C
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* * * * * * ** *
138926 TATTTC-AAAG-TCCACACGAGTTAGTGGCAACCTCTCAAAA-GTCCACAAAAGTTGGTGACAAT
1 T-TTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAA-
* * * * ** *
138988 CGTTTT-AAAAGCCCAAAAGGTCACACAAATTGGGGGCAAAAATTTT-AAAGTC-CACGAGAGTT
62 CCTTTTCAAAAG-CC---A---C-C-CGAGTTGGTGGC-AACCTTTTCAAAGTCATAC--GAGTT
* *
139050 GGTAGCAACC
115 GTTGGCAACC
* * * *
139060 TTTTCAAAAG-TCTACAAGAGTTGGTGGCAACCTTTTCAAAAT-CTCACACAAGTTGGAGGCAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATGCT-ACACGAGTTGGTGGCAAC
* * * * * * * * * ** *
139123 CTTTTCAAAATCCCACACAAGTTAGTAGCAA-CTAGTTCAAAAGCCCACACAAGTTGGGGGTAAC
63 CTTTTCAAAA-GCCACCCGAGTTGGTGGCAACCT-TTTC-AAAG-TCATACGAGTTGTTGGCAAC
139187 C
124 C
* * * * * * * * * *
139188 TTTTCAAAAG-TCCACACGAGTTGATGGTAACCTTTTCAAA-GCCCACATGAGTCGTTGGCAACA
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* ** * * * ** * * *
139251 TTTTCAAAAGGCCACACGAGTTTATGGCGACTTTTTAAAAAACACACACAAGTTGGTGGCAACC
64 TTTTCAAAA-GCCACCCGAGTTGGTGGCAACCTTTT--CAAAGTCATACGAGTTGTTGGCAACC
** * * * * * * * * *
139315 TTTTTGAAAGCCCACACGAGTTAGCGGCAACCTTTTCAAA-GTCCACACGAGTTAGG-GACATCC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTT-GGTGGCAACC
*** * * * * *
139378 TTTTC-AAAGCCTACATAAGTTAG-GGCAACCTTTTCAAAGCCCATACGAGTTATTAGTAACC
64 TTTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * * ** * * ** *
139439 TTTTC-AAAGTTCACACGAGTTGGTGGAAATCTTTTAAAAAACCCAAACTTGTTGGTGCCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* * ** * * * * * *
139503 TTTC-AATGTCCACACGAGTTAATAGCAACATTTTCAAAAGCTCACATGAGTTGGTGGTAACC
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * * * * * ** * * * * * *
139565 TTTTTAAAGGCCCTCACGAGTTGGTGGTAACAATTTCAAA-GTCCACAGGAGTCGATAGCAA-CT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* *
139628 TTTCAAAAGCCAAAAGCCCACATGAGTTGGTGGCAACCTTTTAAAAAGTC-TACGAG-AGTTGGT
65 TTTCAAAAGCC---A--CC-C--GAGTTGGTGGCAACCTTTT-CAAAGTCATACGAGTTGTTGG-
*
139691 CGTAACA
120 C--AACC
* * * * * * ** **
139698 TTTTCAAAAGCCCAAATGAGTTGGTGACAACCTTTTCAAA-GTCCACATAAGTTATTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* * * ** * * *
139762 TTTCAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCCGCATGAGTTGGTAGCAACC
65 TTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGT--CATACGAGTTGTTGGCAACC
* * * * * * * *
139825 TTTTCAAAAGCTCACACGAGTTGGTGACAACCTTTTCAAA-GTCCACACAAGTTGTTGGCAACAT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
** * * * *
139889 TTTTGAAAGTCCACACGAGTTGGTGGTAACCTTTTCAAAGCCTACACGAGTTGTTGGCAACC
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* * * ** * * * *
139951 TTTTTAAAAGCTCACACGAGTTCGTGGCAA-TTTTTACAAAAACCAACATGAATTGGTGGTAACC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTT--AAAATGCTACACGAGTTGGTGGCAACC
* ** * * * *
140015 TTTTTAAAAGCCCACAAGAGTTAGTGGTAACCTTTACAAAGTTCACACGAGTT-TGTGGC-ACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGT-TGGCAACC
** * * * * * * * * *
140077 ATAGTC-AGAGTTTACATCAGTTGGTAGTAACTTTTTCAAAA-GCCTACAAGTGTTGGTGGTAAC
1 -TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTT-AAAATG-CTACACGAGTTGGTGGCAAC
* * * *
140140 CTTTTCAAAAGCCCACACAAGTTGGTGGCAACCATTTT-AAAGTCCACACGAGTTGATGGCAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * ** *
140204 -TTTCAAAAG-TCTACAAGAGTTGGT-GCAACCTTTTCAAAA-GCCCACAAGAGTTAGAAGTAA-
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * * * * * * *
140264 CTATTT-TAATGTCCACACGAGTTGGTGGCAATCTTTTGAAAAGTC-TACAAGAATTGGTGGTAA
63 CT-TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTT-CAAAGTCATAC--GAGTTGTTGGCAA
140327 CC
123 CC
* * * ** * * * * *
140329 TTTTCAAAAACGCACACGAGTTGGTAACAACCATTTTAAAGT-CTGCACCAGTTGTTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* * * * * * *
140393 TTTAAAAAGCTCACACGAGTTGGTGACAACTTTTTCAAAATC-TCGCACGAGTTGGTGGTAACC
65 TTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGTCAT---ACGAGTTGTTGGCAACC
* * * * * * * * *
140456 TTTTCAAAATCGCACACGTGTTGGTAGCAACCTTTT-CAATAGCCTACACGAGTTTGTGGTAACC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAAT-G-CTACACGAGTTGGTGGCAACC
* * * **
140520 TTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTTAAAGCCCACGCGAGTTGTTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * ** * * *
140583 TTTT-AAAATG-TCCACACGAGTTGGTGACAACATTTTCAAAACCCCACACGGGTTGGTAGCAAC
1 TTTTCAAAA-GCT-CACATGAGTTGGTGGCAAC-TTTTTAAAATGCTACACGAGTTGGTGGCAAC
** ** *
140646 CTTTTCAAAA-CTCTACATGAGTTGGTGGCAACAATTTCAAAGTCCATA-GAAGTTGATGGCAAC
63 CTTTTCAAAAGC-C-ACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACG-AGTTGTTGGCAAC
140709 C
124 C
* * * *
140710 -TTTCAAATG-TC-CATAAGAGTTGGTGGCATCCTTTTCAAAA-GCCTAGAAGCCCACAAGAATT
1 TTTTCAAAAGCTCACAT--GAGTTGGTGGCA-ACTTTTTAAAATG-CT---A---CAC--GAGTT
* ** * * * * * * * **
140771 GGTGGCAACCATTTC-AAAGACCATACAAGTTAGTAGTAACCTTTTTAAAATTC-TAC-AATAAT
54 GGTGGCAACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGTCATACGAGTTGT
140833 TGGCAGCAACC
117 T-G--GCAACC
* ** * * * * * * *
140844 TTTTCAAAAGCCCACCCGAGTTAGTGACAACCTTTTCAAA-GTCTTCACAAGTTGTTGGCAACC-
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* ** * * * * *
140907 TTTGAAAAGCCTACATGAGTTAGTCGTAACCTTTTCAAAATGCCACACGAGTTAG-TGGCAA-C
65 TTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTC-AAA-GTCATACGAGTT-GTTGGCAACC
* * * * * * * * *
140969 TTTTTAAAA-TTC-CTATACAAGTTGGTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAA
1 TTTTCAAAAGCTCAC-AT--GAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAA
* * * * * * * * * * **
141032 CATTTTAAAAAATCTACACGAGTTAGTGGCAACCTTTTTAAAAGCCCACACGAGTTGGTGTTAAC
62 CCTTTT-CAAAAGCCACCCGAGTTGGTGGCAACC-TTTTCAAAG-TCATACGAGTTGTTGGCAAC
*
141097 T
124 C
* * * * * ** * * *
141098 TTTTCAAAATCGCACACGAGTTGGTAGCAACCTTTTCAAAAACCCATA-GAGTTGGTGACAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* * ** *** * * * * **
141162 TTTC-AAAGTCCACACAAGTTATTAAAAACTTTTTCTAAAG-CAAACACGTGTTGGTGAAAACC
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTC--ATACGAGTTGTTGGCAACC
* * * * * *
141224 TTTTC-AAAGTCCGCACA--AGTTGGTAGTAACCTTTTCAAAA-GGTGACCCGAGTTGGTGGCAA
1 TTTTCAAAAG--CTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCT-ACACGAGTTGGTGGCAA
** * * ** * * * * * *
141285 ATTTTTCAAAATCTCACTCC-AGCTCATGGCACCCGTTCCAAAATCCA-ACATGAGTTGGTAGCA
62 CCTTTTCAAAAGC-CAC-CCGAGTTGGTGGCAACCTTTTCAAAGT-CATAC--GAGTTGTTGGCA
**
141348 TGC
122 ACC
* * * * * * * **
141351 TTTTCAAAGGC-CTTCATTACTTAGTAGTAACCTTTTTAAAACCCATA-A-GAGTTGGTGGCAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATGC-TACACGAGTTGGTGGCAAC
* *** * * * * * * * *
141413 CTTTGCAAAAGTCCATATGAATTTGTGGTAACATTTTCAAAGCCCAAACGAGTCGTTGGCAATC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * * * * * * *
141477 TTTTCAAGAGCCCACAGGAGTTGGGGGCAAC-CTTTACAATGTTCACATGAGTTTGTGGC-ACCA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAGTTGGTGGCAACC-
** * * * *
141540 TAGTCAAAGCCCACATAGTCAAAGCCCACATGAGTTGGTGGCAACCTTTTCAAAAATCCACACAA
64 TTTTC--A----A-A-AG-C-CA--CC-C--GAGTTGGTGGCAACCTTTTC-AAAGT-CATACGA
* *
141605 GTTATTGGGAA-C
112 GTTGTTGGCAACC
* * * * * * * *
141617 TATTTC-AAAG-TCCACACGAGTTGATGGCAACCTTTCAAAATTCCACAAGAGTTGGTGGTAA-C
1 T-TTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATGCTACACGAGTTGGTGGCAACC
* * *** ** ** *
141679 TATTTTAAAAGCCCAAAAGGTCACACGAATTGGTGGCAAAAATTT-ATTGTCCACGCGAGTTGGT
64 T-TTTCAAAAG-CC---A---C-C-CGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTT
141743 GGCAACC
118 GGCAACC
* * * * **
141750 TTTTAAAAAG-TCTACAAGAGTTGGTGGTAACCTTTTCAAAA-GC--C-C-ATGTTGGTAACAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGA-GTTGGTGGCAAC
* ** * * ** ** * *
141809 CTTTTC-ATAGTCTGCACAAGTTATTGGCAACCTTTTCAAAAG-CCCACAGAGTTGCTGACAA-C
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCATAC-GAGTTGTTGGCAACC
* * * * * * * * * *
141871 TTTATTAAAATCTCGCACGAGTTGGTGGTAACCTTTTCAAAAT-CTCACATGTGTTGGTAGCTAC
1 TTT-TCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCT-ACACGAGTTGGTGGCAAC
* ** * * * * *
141935 ATTTTTGAAGGCCTACACGAGTTTGTGGTAACCTTTTCAAAAGTCCATACGAGTTGGTGGCAACC
63 CTTTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* ** * * * * * * ** *
142000 TTTTC-AAAGCCCACGCGAGTTGTTGGCAACCTTTTAAAAAGTCCACATGAGTTGGCGATAACAT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* ** * * * * * * *
142064 TTTCCAAAGCCCACTTGAGTTGGTAGCAAACTTTTCAAAAGT-AGGCACGAGTTGGTCGCAGCT
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCA--TACGAGTTGTTGGCAACC
** * * * * * **
142127 TTTTTTAAAGCCCACATGAGTTGATGTCAACTTTTTCAAA-GTCTACATGAGAAGGTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* * * * *
142191 TTTCAAAAGTCCAAAAGCCCACACAAGTTGGAGGCAACCATTTCAGAGTTTGCAT--GAGTTGGT
65 TTTCAAAAG-CC---A---C-C-CGAGTTGGTGGCAACCTTTTCAAAG--T-CATACGAGTTGTT
*
142254 GGCAACA
118 GGCAACC
* * * * *
142261 TTTTCAAAA-CTCTACGA-GAGTTGGTCGTAACCTTTTCAAAA-GCCCACACAAGTTGGTGGCAA
1 TTTTCAAAAGCTC-AC-ATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAA
* * *** * * * * * *
142323 CTTTTTC-AAAGTCTACATAAGTTGTTGGCAACCTTTTCAAAAGCTCACACAAATTGATGACAAC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAAC
*
142387 A
124 C
* * * *** * * *
142388 TTTTCAAAATC-CTGCATAAGTTGGCAACAACCTTTTCAAAA-GCTAACATGAGTTGGTGACAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATGCT-ACACGAGTTGGTGGCAAC
* * * * * * * * *
142451 CATTTC-AAAGTGCACACAAGTTGTTGGCAACATTTTCAAAAGTTCACACGAGTTGGTGGTAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * * *
142515 TTTTC-AAAGC-CTACACGAGTTGTTGGCAACATTTTTAAAA-GCTCACACGAGTTGATGGTAA-
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAAC-TTTTTAAAATGCT-ACACGAGTTGGTGGCAAC
* * * * * * **
142576 CTTTTACAAAAACCCACACGAGTTAGTGGCAACCTTTTGAAAAGCCACACGAGTTAG-TGATAAC
63 CTTTT-C-AAAAGCCACCCGAGTTGGTGGCAACCTTTT-CAAAGTCATACGAGTT-GTTGGCAAC
*
142640 T
124 C
* * * * * * * * *
142641 TTTTCAAAATC-CGGCATGAGTTGGGGGTAACCTTTTGAAAATCCCACACGTGTTGGTAGCAACC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACC
* * * * * * * * *
142705 TTTTCAAAGGCCTACACAAGTTTGTGGTAA-CTTATTCAAAAGTCCACACAAGTTGCTAGCAACC
64 TTTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTT-TTC-AAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * *
142769 TTTTC-AAAGC-C-TATGCGAGTTGTTAGAAACCTTTTAAAAAGTCCACACGAGTTGGTGGTAAC
1 TTTTCAAAAGCTCACAT--GAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * * * * * *
142831 TTTTTCAAAAACCCACACGAGTTGGTAGCAACCTTTTCAAAACTC-TACATGAGTTGGTGGTAA-
63 CTTTTC-AAAAGCCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCATAC--GAGTTGTTGGCAAC
142894 C
124 C
* * * * * * * *
142895 TATTT-TAAAG-TCTATAAGAGTTGATGCCAACCTTTCAAAA-GTCTACAAGAGTTGGTGGCAAC
1 T-TTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * *
142957 CTTTTCAAAAGCCTAAAAGCTCACACGAATTGGTGGCAACCATTTCAAAGTCCACACGAGTTAG-
63 CTTTTCAAAAGCC----A---C-C-CGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTT-GT
**
143021 TGATAACC
117 TGGCAACC
* * * * * * *
143029 TTTTTAAAA-TTCTACAAT-AGTTGTTGGCAACCTTTTCAAAA-GCGCACCCGAGTTGGTGGTAA
1 TTTTCAAAAGCTC-AC-ATGAGTTGGTGGCAA-CTTTTTAAAATGC-TACACGAGTTGGTGGCAA
* *** * * * * **
143091 CCTTTTC-AAAGTCTACATAAGTTGTTGGCAACCTTTTCAAAAGCCCAAACGAGTTGGTGATAAC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAAC
143155 C
124 C
* * * * * * *
143156 TTTTCAAAATCCCACACGAGTTGGTGGCAACCTTTTAAAATCCTACCCGAGTTGGTAGCAA-CTA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCTACACGAGTTGGTGGCAACCT-
* ** * * * * *
143220 TTTCAAAGGCCCAAACGAGTTGGTGGTAACATTTTCAAAAATCCACACGAGTTGGTGGCAACC
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * *
143283 TTTTTAAAAGCCCACATGAGTTGGTGGTAACCTTTTCAAA-GTTCACATGAGTTTGTGGC-A-C-
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAGTTGGTGGCAACCT
* * * * * ** ** *
143344 ---C-ATAGTCA---AAG-T-CT---AACATTTTCAGAAGCTCGCATTAGTTGGTGGCAACC
65 TTTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTCA-AAG-TCATACGAGTTGTTGGCAACC
* ** * * ** * * * *
143394 TTTTC-AAAG-TCTATAAAAGTTGGTGGCACCATAGTCAAA-GTCCACACGAGTTAGTGGCAACA
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** * * * * * **
143456 TTTTCAAAAGCCCACATGAGTTGATGAG-AACCATTTCAAAAGCCCATACGAGTTGGTAGCAGTC
64 TTTTCAAAAG-CCACCCGAGTTGGTG-GCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * * * * * * * *
143520 TTATT-TAAAGCCCACATGCA-TTGATGGTGACCTTTTCAAAGTCCATACA--TGTTGGTGGCAA
1 TT-TTCAAAAGCTCACATG-AGTTGGTGG-CAACTTTTTAAAATGC-TACACGAGTTGGTGGCAA
* * * **** * * * *
143581 CATTTTCAAAAGCCCACGCGAGTTAGAAAAAACCTTTTCAAAGTCA-ACATAAGTTGCTAGCAAT
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGTCATAC--GAGTTGTTGGCAAC
143645 C
124 C
* * * * * * *
143646 TTTTCAAAAGCTCACAGGATTTGTTGGCAACCTTTTCAAAAT-CATACACGAGTTAGTAGCAATC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGC-TACACGAGTTGGTGGCAACC
* * * * * * *
143710 TTTTCAAAAACC-CACAGTGTTGGTGAG-AACCTTTTCAAAGTCCACACAAGTTGTTGGAAACT
64 TTTTCAAAAGCCAC-CCGAGTTGGTG-GCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * * *
143772 TTTTCAAAAGCCCACACGGGTTGGTGACAACGTTTTCAAAAT-CCACACAAGTTGTTGGTAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAAC-TTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* * ** * * *
143836 TTTCAAAAGCCTACACGAGTTGGTGGCAACCCTTTT-AAAATCCCACTAG-AGTTGGTAATACC
65 TTTCAAAAGCC-ACCCGAGTTGGTGGCAA-CCTTTTCAAAGTCATACGAGTTGTTGG-CA-ACC
* * * *** ** ** * * * *
143898 TTTTCAAAATCCCACACGAGTTGGTAAAAACCATTTCTAAGGCCCACACGAGTTGGTGGTGACCC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGG-CAACC
* * * * * * * **
143963 TTTT-AAAGGGCCACACGAGTTGGTGGCACCCTTTGCAAAAGTCCACACGAGTTGGTGACAAGA
64 TTTTCAAA-AGCCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* * * * *
144026 TTTTC-AAAGCCTAAACA--CGTTGTTGGCAACTTTTTCAAAA-GC-CCACTAGAGTTGTTGGCA
1 TTTTCAAAAG-CT-CACATGAGTTGGTGGCAACTTTTT-AAAATGCTACAC--GAGTTGGTGGCA
* * ** ** ** * * * *
144086 ACCTTTAC-AAAGTTCACATGAGTTTATGGC-ACCATAGTCAAAATCCACACGAGTTG-GGTGTA
61 ACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGT-CATACGAGTTGTTG-GCA
**
144148 ATA
122 ACC
* * * * * * **
144151 TTTTCAAAAGC-CGACACGAGTTGCTGGTAACCTTTTTAAAGT-CTATACAAGTTGGCAGC-ACC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACC
*** * **** * * ** *
144213 ACAATC-AAAGTCCACACGAGTTGGTGGCAACAAAGTCAAAGTCCACACAAGTTGGCGGCAACA
64 -TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * ** * *
144276 TTTTCCAAAGCCCACATGAGTTGGTAGCAACCTTTTCAAAA-GCAGACACGAGTTGGACGCAGCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGC-TACACGAGTTGGTGGCAACC
*** * * * * * * * *
144340 TTTTTTTAAGCCCACACGAGTTGATGTCAATCTTTTCAAAGCACACACGAGATGGTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* ** * ** ** * * *
144403 TTTTCAAAGGTCTAAAAGCCCACACAAGTTGGAGATAACCATTTCAAA-GTTTGCACGAGTTGGT
1 -TTT------TC-AAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGT
** * * ** * * * *
144467 GGCAATATGTTCAAAAGTCTACGAGAGTTGGTCGCAACCTTTTCAAAAGCCCAAACGAGTTGGTG
57 GGCAACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTG
* *
144532 ACAACT
119 GCAACC
* ** * *
144538 TTTTC-AAAG-TC-CACTAAGTTATTGGCAACCTTTTCAAAA-GCT-CACAAAGTTGGTGGCAAC
1 TTTTCAAAAGCTCACA-TGAGTTGGTGGCAA-CTTTTTAAAATGCTACAC-GAGTTGGTGGCAAC
* * ** * * * * *
144598 CCTTTCAAAATCTCACATGAGTTGGTAGCAACCTTTTTGAAAGCTCACACGAGTTGGTGACAACC
63 CTTTTCAAAAGC-CACCCGAGTTGGTGGCAACC-TTTTCAAAG-TCATACGAGTTGTTGGCAACC
** * * *
144663 TTTTC-AAAG-TCCACACAAGTTGTTGGCAACATTTTCAAAA-GTCCACACGAGTTGGTGGCAAC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * * * * * * *
144725 CTTTTC-AAAGCCTACACAAGTTGTTAGCAACCTTTTTAAAAGCTC-TCATGAGTTGGTGGTAA-
63 CTTTTCAAAAGCC-ACCCGAGTTGGTGGCAACC-TTTTCAAAG-TCAT-ACGAGTTGTTGGCAAC
144787 C
124 C
* * * * * * ** *
144788 TTTTACAAAAACCCACACGAGTTGGTGGCAACCTTTTCAAA-GTTCACACGAGTTTATGG-TACC
1 TTTT-CAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAGTTGGTGGCAACC
** * * *** * * * * * * *
144851 ATAGTC-AAAGTCTACACGAGTTGGTAATAATCTTTCCAAAAGCCTACACGTGTTGGTGGTAACC
64 -TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTC-ATACGAGTTGTTGGCAACC
* * * * * * *
144915 ATTTCAAAAGCCCACACGAATTGGTGGCAACCATTTCAAAA-G-T---C---TTGATGGCAACC-
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
** ** ** * * * * *
144971 TTTCAAAAGTATACAAGAGTCAGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAG-AGTTGGA
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TC---A---TACGAGTTGTTGGC
*
145035 AGTAAC
121 A--ACC
* ** * *
145041 TATTTCAAAA--TGCACATGAGTTGGCGGCAACCTTTCGAAAA-GTCTACAAGAGTTGGTGGTAA
1 T-TTTCAAAAGCT-CACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAA
* * * ** * *
145103 CCCTTTCCAAAGGCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTGTTGGCAACC
62 -CCTTTTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* * * * * * * *
145168 TTTTGAGAAGCCCACATGAGTTGGTGACAACTTTGTCAAAATCCCACACGAGTTGGTGGTAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTT-TTAAAATGCTACACGAGTTGGTGGCAACCT
* * * * * * * *
145233 TTTCAAAATCCCACACGTA-TTGGTAGCTACTTTTTCAAAGGCCTACACGAGCTTG-TGGTAACC
65 TTTCAAAA-GCCACCCG-AGTTGGTGGCAACCTTTTCAAA-GTC-ATACGAG-TTGTTGGCAACC
* * * * ** * * *
145296 TTTTCAATAGTCCGCACA--AGTTGGTGGCAA-TCTTTTCAAA-GCCGATGCGAGTTGTTAGCCA
1 TTTTCAAAAG--CTCACATGAGTTGGTGGCAACT-TTTTAAAATG-CTACACGAGTTGGTGGCAA
* * * * ** * *
145357 CCTTTTAAAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTGGCAAC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC--AAAGTCATACGAGTTGTTGGCAAC
145422 C
124 C
* * * * ** * * * *
145423 TTTTAAAAATCTTATACCAGTTGGTAGCAACCTTTTTAGAA-GGTCACACTAGTTGGTGGCAACC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCT-ACACGAGTTGGTGGCAACC
* **** ** * *
145487 TTTTC-AAAGTCTATAAAAGTTGGTGGC-ACCATAGTCAAAGTCCACACGAGTTAG-TGGCAACA
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGT-CATACGAGTT-GTTGGCAACC
* * * * *
145549 TTTTCAAAAGCCCACATGAGTTGATAGG-AA-TTATTTCAAAA-GCCCACACGAGTTGGTAGCAG
1 TTTTCAAAAGCTCACATGAGTTGGT-GGCAACTT-TTT-AAAATG-CTACACGAGTTGGTGGCAA
* * * * * * *
145611 CCTTATT-TAAAGTCCACACGCGTTGATGGCAACCTTTTCAAAGTCCACATGTGTTAG-TGGC-A
62 CCTT-TTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTT-GTTGGCAA
145673 CC
123 CC
* * * * * *
145675 CTTTCAAAAGCCTAAAAGCCCATAAGATTTTGTGGTAACCTTTTCAAAA-GTCTACGA-GAGTTG
1 TTTTCAAAAG-CT-----CACAT--GAGTTGGTGGCAA-CTTTTTAAAATG-CTAC-ACGAGTTG
*** * * ** * **
145738 GTGGCAACCTTTTCAAAAGCCCATGTGAGCTAGTAACAACATTTTCAAAGTCAATATAAGTTGTT
55 GTGGCAACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTT
145803 GGCAACC
118 GGCAACC
* * * * ** * *
145810 TTTTCAAAATCCCACACT-AGTTGGTGGCAACCTTTTCAAAATCGC-ACATGAGTTACTAGCAAT
1 TTTTCAAAAGCTCACA-TGAGTTGGTGGCAA-CTTTTTAAAAT-GCTACACGAGTTGGTGGCAAC
* * * * * * * * *
145873 CTTTTCAAAAACC-CACAGTGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTATTGGAAACT
63 CTTTTCAAAAGCCAC-CCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * ** * * ** *
145936 TTTTCAAAAGC-CATACGGGTTGGTGAAAACCTTTTCAAAAT-CCACAAAAGTTGTTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* * * * * **
145999 TTTCAAAAGCCTACACAAGTTGGTGGCAACCTTTTTAAAATCCCACT-CGAGTTGGTAAC-ACC
65 TTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAAGT--CA-TACGAGTTGTTGGCAACC
* * ** * ** * * * *
146061 ATTTCAAAATCTCACATGAGTTGGTAACAACCTTTTCTAAGGCCCACACGAGTTGGTGGTAATCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* * * * * * * * * * **
146126 TTTCAATAGCATACACAAGTTGGTGGTACCCTTTGCAAAAGTCCACACGAGTTGGTGGTAAGA
65 TTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* * ** * *
146189 TTTT-TAAAGCCCA-AACACGTTGTTGGCAACTTTTTCAAAA-GTCCACACGAGTTGGTGGCAAC
1 TTTTCAAAAGCTCACATGA-GTTGGTGGCAACTTTTT-AAAATG-CTACACGAGTTGGTGGCAAC
* * * ** ** * * * *
146251 CTTTAC-AAAGTTCACACGAGTTTATGGC-ACCATAGTCAAAGTCCACACGAGTTG-GGTGTAAT
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGT-CATACGAGTTGTTG-GCAAC
*
146313 A
124 C
* * * * * * * *
146314 TTTTCAAAAGC-CGGCACGAGTTGCTGGTAACATTTTTAAAGT-CTATACAAGTTAGTGGC-ACC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAAC-TTTTTAAAATGCTACACGAGTTGGTGGCAACC
** * * * * **** * * *
146376 ATAGTC-ATAGTACACACGAATTGGTGGCAACAAAGTCAAAGTCCACACGAGTTGGTGGCAACA
64 -TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * *
146439 TTTTCAAAAGCCCACATAAGTTGGTAGCAACCTTTTCAAAA-GCAAACACGAGTTGGTCGCAGCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGC-TACACGAGTTGGTGGCAACC
** * * * * * * * **
146503 TTTTTTAAAGCCCACACGAGTTGATGTCAATCTTTTCAAAGCCCACACAAGTTGGAGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * ** * * * *
146566 ATTTC-AAAGTTTGCACGAGTTGGTGGCAACATGTTCAAAA-GTCTACGA-GAGTTGGTCGCAAC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTAC-ACGAGTTGGTGGCAAC
*** * * *
146628 CTTTTCAAAAGCCCAAATGAGTTGGTGACAACTTTTTCAAAGTCCACTA--AGTTATTGGCAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CA-TACGAGTTGTTGGCAACC
* * * * * * *
146691 TTTTCAAAAGCTCACA-AAGTTGGTGGCAACCCTTTCAAAATCCCACATGAGTTGGTAGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
** * * * * *
146755 TTTTGAAAGCTCACACGAGTTGGTGACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACA
65 TTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * *
146817 TTTTCAAAAG-TCCACACGAGTTGGTGGCAACCTTTT-CAAGGCCTACACAAGTTGTTAGCAACG
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* * ** * ** * * *
146880 TTTTTAAAAGCTCTCATGAGTTGGTGGTAA-CTTTTACAAAAACCCACACGAGTTGGTGGTAACC
64 TTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTT-C--AAAGTCATACGAGTTGTTGGCAACC
* * * * * * * * * ** *
146944 TTTTTAAAAGCCCATACGAGTTGGTGGTAACCTTTTCAAA-GTTCACATGAGTTTATGG-TACCA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAGTTGGTGGCAACC-
** * * *** * * * * * * *
147007 TAGTC-AAAGTCTACACGAGTTGGTAATAATCTTTCCAAAAGCCTACACGTGTTGGTGGTAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTC-ATACGAGTTGTTGGCAACC
* * * * * * *
147070 ATTTCAAAAGCCCACACGAGTTAGTGGCAACCATTTCAAAA-G-T---C---TTGATGGCAACC-
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* ** * * * * * *
147126 TTTCAAAAGTCTACAAGAGTCGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAG-AGTTGGA
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TC---A---TACGAGTTGTTGGC
*
147190 AGTAAC
121 A--ACC
* * *** ** * *
147196 TATTTCAATA--TGCATATGAGTTGCCAGCAACCTTTCGAAAA-GTCTACAAGAGTTGGTGGTAA
1 T-TTTCAAAAGCT-CACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAA
* * ** * * *
147258 CCCTTTTCAAAGGCCACACGAGTTGGTAACAACCTTTTCAAAGTCTACACAAGTTTTTGGCAACC
62 -CCTTTTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* * * * * * * * * *
147323 TTTTGAGAAGCCCACATGAGTTGGTGACACCTTTGTCAAAATCCTGCACGAGTTGGTAGTAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTT-TTAAAATGCTACACGAGTTGGTGGCAACCT
* * * * * * * *
147388 TTTCAAAATCCCACAC-ATATTGGTAGCTACCTTTTCAAAGGCCTACACGAGTT-TGTGGTAACC
65 TTTCAAAA-GCCACCCGA-GTTGGTGGCAACCTTTTCAAA-GTC-ATACGAGTTGT-TGGCAACC
* * * * * * *
147451 TTTTCAAAAGTCCGCACA--AGTTGGTGGTAA-TCTTTTCAAA-GC-CCATGTGAGTTGTTAGCA
1 TTTTCAAAAG--CTCACATGAGTTGGTGGCAACT-TTTTAAAATGCTACA--CGAGTTGGTGGCA
* * * ** * ** * **
147511 ATCTTTTAAAAAGCCCACACGAGTTGGTGATAACCTTTTTAAAAACCCACACGAGTTGGGGGCAA
61 ACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTT-CAAAGTCATACGAGTTGTTGGCAA
147576 CC
123 CC
* * * * * * * * * * *
147578 TTTTCAAAATC-CTATACGAGTTGGTAGCAACCTTTTCAAAGGCCCATACGAGTTGGTGGTAACA
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** * * * * * * * *
147642 TTTTCAAAAATTCGCACGAGTTTGTGGCAACCTTTTTAAATGCCCACATGAGTT-TGTGGTAACC
64 TTTTC-AAAAGCCACCCGAGTTGGTGGCAACCTTTTCAAA-G-TCATACGAGTTGT-TGGCAACC
* * * * * * *
147706 TTTTC-AAAGTTCACAGGAGTTTGTGGC-AC-----CATA-G-T-CA-GA----GT-CCAACATT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCTACACGAGTTGGTGGCAACCTT
* * * ** *
147755 TTCAAAACGTCACACAAGTTGGTGGCAACCTTTTCAAAGTCTATAAAAGTTGGTGGC-ACC
66 TTCAAAA-GCCACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
** * * * * ** **
147815 ATAGTC-AAAG-TCCACACGAGTTAGTGGCAACATTTTCAAAA-GCCCACATTAGTTAATAGG-A
1 -TTTTCAAAAGCT-CACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTACACGAGTTGGT-GGCA
* * * * * * * *
147876 A-CTATTTCAAAAGCCCACACGAGTTGGTAGCAGCCTTATTTAAAGTCCACACGCGTTGATGGAA
61 ACCT-TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTT-TTCAAAGT-CATACGAGTTGTTGGCA
147940 ACC
122 ACC
* * * * * * * *
147943 TTTTC-AAAG-TCCACATGTGTTAGTGGCAACCCTTTCAAAA-GCCCAAAAGCCCATAAGATTTT
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAA-CTTTTTAAAATG--C--TA---C--ACGAGTTG
* * ** * * *
148005 GTGGTAACCTTTTCAAAAGTCTACGAGAGTTGGTGGCAACCTTTTCAAAAGCCCATGCGAGCTAG
55 GTGGCAACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAG-TTG
** *
148070 -TAACAACA
116 TTGGCAACC
* * * * *
148078 TTTTC-AAAG-TCAACATAAGTTGTTGGCAACTTTTTCAAAA-GCCCACACTAGTTTGTGGCAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTT-AAAATG-CTACACGAGTTGGTGGCAAC
* ** * * * ** ** * * *
148140 CTTTTCAAAATCGCACATGAGTTAGTAGCAATCTTTTCAAAAACCCACAGTGTTGGTGACAACC
63 CTTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGTCATAC-GAGTTGTTGGCAACC
* ** ** * * * **
148204 TTTTC-AATG-TCCACACAAGTTATTGGAAACTTTTTCAAAA-GCCCACACGGGTTGGTGAAAAC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTT-AAAATG-CTACACGAGTTGGTGGCAAC
* * * * * * * *
148266 CTTTTCAAAATCCACACAAGTTGTTGGCAACCTTTTCAAAAGCCTACACAAGTTGGTGGCAACCC
63 CTTTTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTC-AAAGTC-ATACGAGTTGTTGGCAA-CC
* ** * * * **
148331 TTTT-AAAATC-CTAC-TCGAGTTGGTAACACCATTTCAAAAT-CTCACATC-AGTTGGTAACAA
1 TTTTCAAAAGCTC-ACAT-GAGTTGGTGGCAACTTTTTAAAATGCT-ACA-CGAGTTGGTGGCAA
* * * * * * * *
148391 CCTTTTCTAAGGCCCACACGAGTTGGTGGTAATCTTTTCAATAG-CATACACGAGTTGGTGGTAC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAA-AGTCAT--ACGAGTTGTTGGCAA
148455 CC
123 CC
* * * * * ** *
148457 TTTGCAAAAG-TCCACACGAGTTGGTGGCAAGATTTTT-AAA-GCCCAAAC-ACGTTATTGGAAA
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGA-GTTGGTGGCAA
* * * * *
148518 CTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTACAAAGTTCAAATGAGGTTG-TGGC-AC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGA-GTTGTTGGCAAC
148581 C
124 C
*** * * * * * *
148582 ACAGTC-AAAG-TCTACACGAGTTGG-GTGTAA-TATTTTCAAAA-GCCCACACGAGTTGCTAGT
1 -TTTTCAAAAGCTC-ACATGAGTTGGTG-GCAACT-TTTT-AAAATG-CTACACGAGTTGGTGGC
* ** ** * * ** * *
148642 AACCTTTT-TAAAGTTTATGCAAGTTGGCGGC-ACCATAGTCAAAGTCCACACG-GATTGGTGGC
60 AACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGT-CATACGAG-TTGTTGGC
*
148704 AACA
121 AACC
*** * * * ** *
148708 AAGTC-AAAG-TCCACACGAGTTGGTGGCAACATTTTCAAAA-GCCCACATAAGTTGGTAGCAAC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * * * * * * * * * ** *
148770 CTTTTCAAAAGCAAACACGAGTTGGTTGTAGCTTTTTTAAAGCCTACACGAGTTGATATCAATC
63 CTTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* * * *
148834 TTTTC-AAAGTTCACACGAGATT-GTGGCAACCTTTTCAAAGGTCCAAAA-GCCCACACAAGTTG
1 TTTTCAAAAGCTCACATGAG-TTGGTGGCAA-CTTTT------T--AAAATG-CTACACGAGTTG
* * * *** * * * ** *
148896 GAGGCAATCATTTC-AAAGTTTGCACAAGTTGATGGCAATATTTTCAAAAGTC-TACGAG-AGTT
55 GTGGCAACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCATACGAGTTGTT
148958 GGTCACAACC
118 GG---CAACC
* ** * * *
148968 GTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCGAAATCCTACATGAGTTGGTAGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* * * * * *
149033 TTTCAAAAGCTCACACAAGTTGGTGGCAACCTTTTCAAAATCCTACATGAGTTGGTAGCAACC
65 TTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGTCATAC--GAGTTGTTGGCAACC
* * * * * * * * **
149096 TTTCCAAAAGCTCACACGAGTTGGTGACAACCTTTTCAAA-GTCCACACAAGTTGTTGGCAATAT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* *** * * * ***
149160 TTTCAAAAGTCTATAAGAGTTTGTGGCAACCTTTTCAAATGCTTAAAAGCCCACAAGAGTTGGAA
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAA-G--T-------CATACGAGTTGTTG
149225 GCAA-C
119 GCAACC
* * * * *
149230 TATTT-TAATG-TC-CATACGAGTTGGTGGTAA-TATTTTGAAAA-GTCTACAAGAGTTGGTGGT
1 T-TTTCAAAAGCTCACAT--GAGTTGGTGGCAACT-TTTT-AAAATG-CTACACGAGTTGGTGGC
* * *** * *
149290 AACCTTTTCAAAAGCTTACACGAGTTGGTAATAACCTTTTCAAAGTC-TGCACAAGTTGTTAGCA
60 AACCTTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGTCAT--ACGAGTTGTTGGCA
**
149354 ATT
122 ACC
* * * *** * ** * *
149357 TTTTCGAAAGCCCACTTGAGTTGGTAATAACTTTTTCAAAATCCCGCACGAGTTAGTGGTAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTT-AAAATGCTACACGAGTTGGTGGCAACCT
* * * * * * *
149422 TTTCAAAATCC-CGCACGTGTTGGTAGCAACCTTTTCAAAGGCCTACATGAGTT-TGTCGTAACC
65 TTTCAAAAGCCAC-C-CGAGTTGGTGGCAACCTTTTCAAAGTCATAC--GAGTTGT-TGGCAACC
* * * * *
149485 TTTTCAAAAG-TCGACACGAGTTGGTGGCAACCTTTTCAAA-GC-CCACGTGAGTTGTTGGCAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATGCTACAC--GAGTTGGTGGCAAC
* * * * * ** * * * *
149547 CATTTAAAAAGTCCACACAAGTTAGTGGCAACCTTTTCAAAAACCCACACGAGTTGGTAGCAACT
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC--AAAGTCATACGAGTTGTTGGCAACC
* * * * * * * *
149612 TTTTCAAAA-CTCTACACGAGTTGGTGGCAACTATTTCAAA-GTCCATAGGAATTGATGGCAACC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** * * *
149675 -TTTCAAAAGTCCACAAGAGTTGGTGGCAACCTTTTCAAAAGCCTAAAAGCCCACACGAATTGGT
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG--T-------CATACGAGTTGTT
*
149739 GGTAACC
118 GGCAACC
* * * * * * ** *
149746 ATTTC-AAAG-TCCACACGAGTTAGTGGTAACCTTTTTAAAATTCTATAATAGTTGGTGCCAACC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACC
* ** * * *
149809 TTTTCAAAAGCCCACCCGAGTTAGTGATAACCTTTTCAAAATCCACACAAGTTGTTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * * *
149872 TTTTCACAAGCCCACACGAGTTGGTGGTAACCTTTTCAAAATCCCACTCGAGTTGGTGGGAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* ** * * * * * * * **
149937 TTTCAAAATCCTACATGAGTTAGTAGCAACATTTTCAAAGGCTTACACGAGTTGGTGGTAATA
65 TTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAA-G-TCATACGAGTTGTTGGCAACC
* * * * * * * *
150000 TTTTTAAAA-ATATACATGAGTTAGTGGCAACATTTTTAAAA-GCCAACATGAGTTGCTAGCAAC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * * ** * * *
150063 CTTTTCAAAGGCCCACACGAGTTGGTGGTAATATTTTCAAAAATC-TACATAAGTTGGTGGCAA-
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCATAC--GAGTTGTTGGCAAC
150126 C
124 C
* * * * * * ** *
150127 TATTTTAAAAGCCCACATGAGTTGGTGGTAACCTTTTCAAA-GTTCACACGAGTTTTTAGC-A-C
1 T-TTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAGTTGGTGGCAACC
* * * * * * ** *
150189 ----C-ATAGTCA---AAG-T-CT---AACATTTTCAGAAGCTCACATTAGTTGGTGGCAACC
64 TTTTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTCA-AAG-TCATACGAGTTGTTGGCAACC
* ** * * ** * * * * *
150239 TTTTC-AAAG-TCTATAAAAGTTGGTGGCACCATAGTCAAA-GTCCACACGAGTTCGTGGTAACA
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* ** * * * * ** * * *
150301 TTTTCAAATGCCCACATGAGTTGATGGGAACCATTTCAAAAGCCCACGCGAGTTGGTAGCAGCC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * * * * * * * *
150365 TTATCTAAAGCCCACACGCA-TTGATTGCAACATTTTCAAA-GTCCACAC-ATGTTGGTGGCAAC
1 TTTTCAAAAGCTCACATG-AGTTGGTGGCAACTTTTTAAAATG-CTACACGA-GTTGGTGGCAAC
* * *
150427 CTTTTCAAAAGCCCAAAAATCCATACGAATTGGTGGTAACCTTTTCAAAAGTC-TGCGAGAGTTG
63 CTTTTCAAAAG-CC----A-CC---CGAGTTGGTGGCAACCTTTTC-AAAGTCATAC--GAGTTG
*
150491 GTGGCAACC
116 TTGGCAACC
** * *** * ** * ** * *
150500 TTTTCAAAAG-TCTACGCGAGTTAGTAATAACCTTTTCGAA-GTCAACATAAGTTGTTGGCAACA
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* * * * * *
150563 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAATCGCACATGAGTTGGTGGCAATC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT--CATACGAGTTGTTGGCAACC
* * * * * * * * * * *
150627 TTTTAAAAAACAT-ACA-GTGTTGGTGACAACCTTTTCAAA-GTCCACACAAGTTGTTGGAAACT
1 TTTTCAAAAGC-TCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* ** * ** * * *
150689 TTTTCAAATGCCCAGACGGGTTGGTAACAACCTTTTCAAAATCCACACAAGTTGTTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * * * *
150752 TTTTCAAAAGCCCAAACGAGTTAGTGGCAACCCTTTTAAAGTCCCACTCAAGTTGGT---AACAC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAAC-C
* * ** * * * * *
150814 TATTTCAAAATCCCACACGAGTTGGTAACAACCTTTTCCAAGGCCGACACGAGTTGGTGGTAACC
64 T-TTTCAAAA-GCCACCCGAGTTGGTGGCAACCTTTT-CAAAGTC-ATACGAGTTGTTGGCAACC
* * * * ** * * * **
150879 TTTTCAAAAGCACACACGAGTTGTTGGCACCCTTTACAAAAAT-CCACATGAATTGGTGGCAAGA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCA-ACTTT-TTAAAATGCTACACGAGTTGGTGGCAACC
** * ** * * * *
150943 TTTTC-AAAGCCCAAACAAGTTTTTGGCAACCTTTTCAAAAGCCCACAGGAGTTGGTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * * ** ** * * ** * * * **
151006 TTTAC-AAAGTTTACACAAGTTTATGGCACCATAGTCAAA-GTCCACACGAGTTGG-GTGTAATA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTG-GCAACC
* * * * * * *
151068 TTTTCAAAAGCTGACACGAGTTGCTGGAAACTTTTTTAAAGTCTATACAAGTTAG-TGGC-ACC
64 TTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTT-GTTGGCAACC
** * **** * *
151130 ATAGTC-AAAG-TACACACGAGTTGGTGGCAACAAAGTCAAA-GTCCACACGAGTTGGTGGCAAC
1 -TTTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
**** * * * * ** * *
151192 AAAGTC-AAAGTCCACACGAGTTGGTGGCAACATTTTCAAAAGCCCACATAAGTTGGTAGCAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * ** * * * * * * * * * * *
151256 TTTACAAATGCAAAAACGAATTGGTCGCAGCTTTTTTTAAA-GACCATATGAGTTGCTGTCAACC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** * * **
151320 TTTTC-AAAGTCCACATGAGATGGTGGCAACCTTTTCAAAAGTCCAAAAGCCCACAGAAGTTGCA
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-C---A---TAC-G-AGTTGTT
151384 GGCAACC
118 GGCAACC
* * * ** * ** *
151391 ATTTC-ATAGTTTGCACGAGTTGGTGATAACATTTTCAAAA-GTCTACGA-GAGTTGGTGGCAAC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTAC-ACGAGTTGGTGGCAAC
* * * ** *
151453 CTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTCAAAGTCCACATAAATTGTTGGCAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
** * * * * * * * *
151517 TTTTCAAAAGCTCACACAAGTTGGTGACAACCTTTTCAAAATCCCATATGAGTTGGTAGCAACAT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* *** ** * * *
151582 TTTCCAAAGCTCACATAAGTTGGTAACAACCTTTTCAAAGTCCACACAAGTTGTTGGCAACA
65 TTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * *
151644 TTTTCAAAAGTTCACACGAGTTGGTGGCAACCTTTTCAAATCCTACACGAGTTGTTGGCAACGTT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCTACACGAGTTGGTGGCAACCTT
* * * * * * * *
151709 TTTAAAAGCTCACACGAGTTGATGGTAA-CTTTTACAAAATCCCACACGAGTTGGTGGTAACC
66 TTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTT-CAAAGT--CATACGAGTTGTTGGCAACC
* ** * * * *
151771 ATTTT-AAAAGCCCACGCGAGTTGGTGGTAACCTTTTCAAA-GCTCACACGAGTTTGTGGC-A-C
1 -TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAGTTGGTGGCAACC
* * ** * * * * * * *
151832 TATAGTC-AAAGTCTACATGAATTGGTAGTAACCTTTTCAAAAG-CCTACATATGTTGGTGGTAA
64 T-T-TTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCATAC-GA-GTTGTTGGCAA
151895 CC
123 CC
* * * ** * *** *
151897 TTTTCAAAAGCCCACACGAGTTGTTGGCAACCATTTCAAA-GTCTACACGAGTTGACAGAAACC-
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* * * * ***
151960 TTTCAAAAGTCTA-CAGAAGTTGGTGGCAACCTTTTCAAAAGCCCAAACGAGTTGGAAGCAA-C
65 TTTCAAAAG-CCACCCG-AGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * * * * *
152022 TATTTCAATATC-CACACGAGTTGGTGGCAACCTTTTGAAAA-GTCTACAAGAGTTGGTGGTAAC
1 T-TTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * * * * * ** * *
152085 CTTTTCAAAAGCCCACACAAGTTAGTGACAACTTTTTCAAAATTCCGCACGAGTTGGTGGTAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* ** * * * ** * * * * *
152150 TTTTTAAAATTTCACACGTGTTGGTAGCAACCATTTCAAAGGCTTACATGAGTTTGTGGTAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGC-TACACGAGTTGGTGGCAACCT
* * ** *
152215 TTTTAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAAAG-CCCACGTGATTTGTTGGCAACC
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGTCATAC--GAGTTGTTGGCAACC
* * * * * * *
152277 GTTTAAAAAG-TCCACACGAGTTGGTGGCAACCTTTTCAAA-GTTCACACAAGTTTGG-GGCAAC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACTTTTTAAAATGCT-ACACGAG-TTGGTGGCAAC
* ** * ** * * * * *
152339 ATAGTC-ATAGTCCACATGAGTTGGTGGTAACCTTTTCAGAAGGCTACACAAGTTGGTGGCAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCA-AAGTC-ATACGAGTTGTTGGCAACC
* ** * * * * *
152403 TTTTCAAAAGCTTACCCGAATTGGTGGAAACTTTTTTAAA-GTCCACATGAGTTGGTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
** * ** * * *
152467 TTTCAATAA-CCTATACGAGTTGGTGGTAATTTTTTCGAAGTC-TACATAAGTTGGTGGCAACC
65 TTTCAA-AAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAAGTCATAC--GAGTTGTTGGCAACC
* * * ** * * *
152529 TTTTC-AAAGTCTACACA--AGTTGATTGC-CCTATAGTCAAA-GTCCACACGAGTAGGTGGCAA
1 TTTTCAAAAG-CT-CACATGAGTTGGTGGCAACT-TTTTAAAATG-CTACACGAGTTGGTGGCAA
* * * *** * * *
152589 CCTTTCCAGAAGCCTTCATAAGTTGGTGGTAACCTTTTCAAAGTCTATACAAGTTGGTGGC-ACC
62 CCTTTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* ** ** * ** ** *
152653 ATATTC-AAAG-TCCACACAAGTTGAAGGCAAAATTTTTAAAA-GCCCGCACGAAATGGTGGTAA
1 -TTTTCAAAAGCT-CACATGAGTTGGTGGC-AACTTTTTAAAATG-CTACACGAGTTGGTGGCAA
* * * * * * * * * *
152715 CTTTTTTAAAAGCCCACACGAGTTGGTGGCAGCCTTTTTAAATGCCCACATGACTTGATGGCAAC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAA-G-TCATACGAGTTGTTGGCAAC
152780 C
124 C
* * * * *
152781 TTTTC-AAAG-TCTACACGAGTTGGTGGTAACTTTTTCAAA-GCCTGCACGAGTTAGTGGCAACC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* * * * * * * ** **
152843 TTGTC-AATGTCCACACAAGTTTGTGGTAATCTTTTCAAAAGTCCATACTCGTTGGGGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* * * *
152906 TTTTC-AAAG-TCCACACT-AGTTGATGGCAGCTTTTTTAAAA-GCCTACACGAGTTGATGGCAG
1 TTTTCAAAAGCT-CACA-TGAGTTGGTGGCAAC-TTTTTAAAATG-CTACACGAGTTGGTGGCAA
* * * * * * * *
152967 CCTTTTTAAAAGCCTACACGAGTTGATGGCAGCCTTTTTAAAAGCCTACACGAGTTGATGGCAAC
62 CCTTTTCAAAAGCC-ACCCGAGTTGGTGGCAACC-TTTTCAAAGTC-ATACGAGTTGTTGGCAAC
153032 C
124 C
* * * * * * *
153033 TTTTCAAAATC-CGCACGAGTTGGTGGCAACCTTTTT-ATA-GCCAACACGAGTTGGTAGCAACA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* ** * * * * **
153095 TTTT-TAAAGTATACACGAGTTGGTGGCAACCATTTCAAAAGTCCACACTAGTTGGAGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGTTGGCAACC
* * * * * * ** **
153158 ATTTC-AAAGTTCACACGAGTTGGT-GCTAACCTTTTCAAATGCTCATACGAGCAGGTGGCAATA
1 TTTTCAAAAGCTCACATGAGTTGGTGGC-AACTTTTTAAAATGCT-ACACGAGTTGGTGGCAACC
* ** * * * * * **
153221 TTTTC-AAAGTCTATACAAGTTGGTGGC--CCTATAGTCAAAGTCCACACGCA-TTGGTGGTATT
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCT-T-TTCAAAGT-CATACG-AGTTGTTGGCAAC
*
153282 A
124 C
* * * * ***
153283 TTTTCGAAAGC-CTACATGAGTTGGTGGCAACCTTTTCAAAA-GCCCATACGAGTTGGTGGTTGC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGG-CAA
* * * * * *
153346 CCTTTT-AAAAACCTACACGAGTTGATGGCAACCTTTTCAAAGTCCATAGGAGTTGGTGGTAACC
62 CCTTTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * * * * *
153410 TTTTC-AAAGCACATACGAGTTAGTGGCAACCTTTTCAAA-GTCCACATGAGTTGGTGGCAATC-
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
* * ** * * * * * *
153472 TTTCAAAAGCCCACACGAGTTGTTGGCTGCCTTTTTAAAAGGCCACACAAGTTGATAGCAACC
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAA-GTCATACGAGTTGTTGGCAACC
** ** * * * ** * * *
153535 TTTTCAAATTC-CACACAAGTTAAG-GGTAACTTTTTCAAA-GCCCCTATGAGTTAGTGGCAAAC
1 TTTTCAAAAGCTCACATGAGTT-GGTGGCAACTTTTTAAAATGCTAC-ACGAGTTGGTGGCAACC
** * * * * * * *
153597 TTTTC-AAAGTCCACATGAGCTGCTGGCAACCTTTTCAAAAGCACAAACTAATTGGTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAACC
* * ** * * *
153660 CTTTC-AATG-TCCACACT-AGTTGGTGGCAACCATTTCAAA-GTCCACACGAGTTGATGGCAAC
1 TTTTCAAAAGCT-CACA-TGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
*** * * *
153721 C-TTTCAAAAGCCTAAAAGAGTTGGTGGTAACCTTTTCAAAAGCCCAAATGCCCACACGAGTTGG
63 CTTTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTC-AAAG------T---CATACGAGTTGT
*
153785 TGACAACC
117 TGGCAACC
* * **
153793 ATTTT--AAAG-TCTACACGAGTTGGTGGCAACTTTTTCAAAA-GTCTACAAGAGTTATTGGCAA
1 -TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTT-AAAATG-CTACACGAGTTGGTGGCAA
* * * * * * * * * *
153854 CCTTTTC-GAAGTCCACACAAGTTGTTGGCAACTTTTTCAAAAGCCCACACGAATTGGTGGTAAC
62 CCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTTGTTGGCAAC
*
153918 A
124 C
** * * * *
153919 TTTTTGAAATC-CTACATGCGTTGGTGGCAAACTTTTCAAAAT-CTCACACGAGTTGGTGACAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGC-AACTTTTTAAAATGCT-ACACGAGTTGGTGGCAAC
* * * * * ** * * * *
153982 CATTTC-AAAGTCCACTCAAGCTGTTGGCAACCTTTTCAAAAACCCACACGAGTTGCTAGCAACA
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC--AAAGTCATACGAGTTGTTGGCAACC
* * * * * * * ** * *
154046 TTTTCAAAATCCCACACGAGTTGCTGGCAACCTTTCAAAATCCCCCACGAGTTGGTGGTAAGCTT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCTACACGAGTTGGTGGCAACCTT
* * * * * * *
154111 TACAAATGTCCACACGAGTTGGTGGCAACCTTTTGAAAGCCCAAATGAGTTGTTGGCAACC
66 TTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * * *
154172 TTTTCAAAAGCCCATAGGAGTTGGTGGCAACCTTTTCAAAAAT-CCACA-GAGTTGGTGGCAACC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTT-TAAAATGCTACACGAGTTGGTGGCAACC
* ** * * * * * ** *
154235 TTTTCAAAAATCCACATGAATTGGTGGTAACCATTTCAAAGTCCACATGAGTTAATAGCAACC
64 TTTTC-AAAAGCCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * * *
154298 -GTTCAAAAG-TC-CATAAGAGTTGGTGTCAACCTTTTCAAAA-GCCCAAAAGCCCACATATGTA
1 TTTTCAAAAGCTCACAT--GAGTTGGTGGCAA-CTTTTTAAAATG--C--TA---CAC-GA-GTT
***** * * *
154359 GGTGG-ATACCTTTTCAAAAGTCTGTAAGAGTTGGTGGCAACCTCTTCAAAAGCCCACACGAGTT
54 GGTGGCA-ACCTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAG-TCATACGAGTT
* * *
154423 GGTGACAACT
115 GTTGGCAACC
* * * * *
154433 TTTTC-AAAG-TCCACA-GAAGTTGTTGGCAACCTTTTCAAAA-GCCCACATGTGTTGGTGGCAA
1 TTTTCAAAAGCT-CACATG-AGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAA
* * * * * * * * * * *
154494 CCTTTTCAAAATCTCGCACGAGTTCGTGGTAACCTTTTTAAAATCCACACAAGTTGGTAGCAACC
62 CCTTTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * ** * * * ** * * * * * *
154559 -TTTCGAAGGCCCACATAAGTTAATGGTAACCATTTCAAAAAACCAAATGAGTTGGTAGTAAACT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
* * * * * * *
154623 TTTCAAAAAACCACACGAGTTGGTGGTAACCTATTCAAAAATCCACACGAATT-TGTGGCAACC
65 TTTC-AAAAGCCACCCGAGTTGGTGGCAACCTTTTC-AAAGT-CATACGAGTTGT-TGGCAACC
* ** * * * * ** *
154686 ATTTC-AAAG-TCCACATGAGTTAATGGC-AGTCTTTCAAAA-GTCCACAAGAGTTATTGGCAAT
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACT-TTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * *
154747 CTTTTCAAAAGCTCAAAAGCCCAAACGAGTTGGTAGCAACCTTTTCAAAAG-CCTAGCGAGTTGG
63 CTTTTCAAAAGC-C---A--CC---CGAGTTGGTGGCAACCTTTTC-AAAGTCATA-CGAGTTGT
*
154811 TGGTAACC
117 TGGCAACC
* * ** * *
154819 TTTTC-AAAG-TCTACACGAGTTGGTGGCAAGTTTTCCAAA-GTCTATACAAGTTGGTGGC-ACC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** *** * * * * * *
154880 ATAGTC-AAAGTCCAAATGAGTTAGG-GGCAACATTTTTAGAAGCCCACAAGAGTTGGTGGCAAC
64 -TTTTCAAAAG-CCACCCGAGTT-GGTGGCAACCTTTTCA-AAG-TCATACGAGTTGTTGGCAAC
154943 C
124 C
* * ** * * ** * ** * *
154944 TTTTC-AAAGTCTAATACAAGTTGGTGGCACCATAGTCAAA-GTCCCCACGTGTTGGTGGCAACA
1 TTTTCAAAAG-CTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** * * * * * * * *
155007 TTTTCAAAAGCCTACATGAATTGGCGACAAACTTTTCAATGTCCACAAGAGTTGGTGGCAA--
64 TTTTCAAAAGCC-ACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * * ** * *
155068 ----C-----CT-ACA--AGTTGGTGGTAACCTTTTCAAA-GCGCACAAAAGTTGATGG-TACCA
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGC-TACACGAGTTGGTGGCAACC-
* * * * * * * * * **
155119 TAGTT--AAAGTTCACACGAGTTGGTGGCAACCTATTAAAAGCCCACATGAGTT-TGTGGTAAAT
64 T-TTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGT-TGGCAACC
* * * * * * * *
155181 TTTTC-AAAG-TACACGTAAGTTGTTGGCAATCTTTTCAAAGT-CCACACAAGTTGGCGGC-ACC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACC
** * * * * * * *
155242 ATAGTC-GAAGTCCACACGAGTTAGTGGTAACCTTCTCAAAGCCCATACGAGTTGATGGCAACC
64 -TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * * * * * * *
155305 TTTTCAAAATCCCACACGAGTTGGTGACAACCTTTTTAGAGT-CCACACAAGTTGTTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
** * * * * *
155369 TTTCAAAAGCTCATACGAGTTGGTGGCAATCTTTTCAAAATCCCACATGAGTTGGTGGCAACC
65 TTTCAAAAGC-CACCCGAGTTGGTGGCAACCTTTTCAAAGT--CATACGAGTTGTTGGCAACC
* * * * * *
155432 TTTTCAAAATCCCACACGAGTTGGTAGCAACCTTTTCAAAA-GCCCACACGAGTTGGTGGCAA-C
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAACC
** * * ** * * *
155495 TTCTGT-AAAAGTCCATACGAGTTGGTCGTAACCTTTTCAAAACCTAAACGAGATATTGGCAACC
64 TT-T-TCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* * * * * * * * *
155559 TTTTTAAAAGC-CTATAGGAATTGGCGGCAACCTTTTCAAAA-GCCCACACGAATTGGTGGTAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
*** * * * * * *
155622 CTTTTC-AAAGCCCACTTAATTTGGTGGCAACCGTTTCAAAAG-CCTAACGTGTTGGTGGTAACC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTC-AAAGTCAT-ACGAGTTGTTGGCAACC
* * * * * *
155685 TTTTC-AAAG-TCTACACGAGTTGGT-ACAA-TATTTTAAAAAGCCCACACAAGTTGGTGGCAAA
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACT-TTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * *
155746 CTTTTCAAAATCCACACGAATTGGTGGCAA------C----T--TACGAGTTAG-TGGCAACC
63 CTTTTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTCAAAGTCATACGAGTT-GTTGGCAACC
* * * *
155796 TTTT-TAAAG-TCCACATGAGTTGGTGGC-ACTATTGTCAAA-GTCCACACGAGTTGGTGGCAAC
1 TTTTCAAAAGCT-CACATGAGTTGGTGGCAACT-TTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * * * * * * *
155857 TTTTTCAAAA--CA--CAAGTTAGTGGTAACCTTTTCAAAGTCCACATGAGTTGGTGGCAATC
63 CTTTTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTCAAAGT-CATACGAGTTGTTGGCAACC
* * * ** * ** * * * *
155916 TTTT-TAAAG-TC-CATACGTGTTGCTGGCTCCATAGTCAAA-GTCCACACGAGTTAGTGGCAGC
1 TTTTCAAAAGCTCACAT--GAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAAC
* * *** * * *
155977 TTTTTCAAAAGCC-CGCACGAATTGGTAAAAACCTTTTCAAAGTCTACACGAGTTGGTGGCAAGC
63 CTTTTCAAAAGCCAC-C-CGAGTTGGTGGCAACCTTTTCAAAGTC-ATACGAGTTGTTGGCAACC
* * * ** * * ** * * * * *
156041 -TTTCCAATG-TCTATACCAGTTGGTGGCACCATAGT-CAATGTCCAAAGGAGTTTGGGGGCAAC
1 TTTTCAAAAGCTC-ACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAG-TTGGTGGCAAC
* ** * * * * * * * * *
156103 CTTTTCAGAAGCCCACATGAGTTGCTGGCAACGTTTTCAAAATCCCAAATGCGTTGGTGGAAAAC
63 CTTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAGT--CATACGAGTTGTTGGCAACC
* * * * ** * * * * *
156168 TTTTCAAAATCCCACACGAGTTGGTGACAACCATTTCAAA-GCCTATACAAGCTGTTGGCAACCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATG-CTACACGAGTTGGTGGCAACCT
** * * * *
156232 TTTCAAAAGCCCATACGAGTTGGTGGCAACCTTTTTCAAAATCCCACACGTGTTGGTGGCAACC
65 TTTCAAAAG-CCACCCGAGTTGGTGGCAACC-TTTTCAAAGT--CATACGAGTTGTTGGCAACC
* * ** * * * * *
156296 -TTTCAAAATCCCACACAAGTTAGTAGCAACATTTTTAAAA-GCCTACACGAGTTAGTGGTAAGC
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAAC-TTTTTAAAATG-CTACACGAGTTGGTGGCAACC
* * ** * * * **
156359 TTTGCAAATGTCCACATGAGTTGGTGGCAACTTTTTGAAAGCTCAAACTTGTTGTTGGCAACC
64 TTTTCAAAAG-CCACCCGAGTTGGTGGCAACCTTTTCAAAG-TCATACGAGTTGTTGGCAACC
* * * * * * * *
156422 TTTTCAAAAACCCATAAGAGTTGGTGGCAACCTTTTCAAAAAGCCACACGAGTTGGTGGCAATCT
1 TTTTCAAAAGCTCACATGAGTTGGTGGCAA-CTTTTTAAAATGCTACACGAGTTGGTGGCAACCT
156487 TTTCAAAA
65 TTTCAAAA
156495 ATCCACATGA
Statistics
Matches: 14675, Mismatches: 3930, Indels: 2733
0.69 0.18 0.13
Matches are distributed among these distances:
107 10 0.00
109 13 0.00
110 162 0.01
111 204 0.01
112 50 0.00
113 5 0.00
114 10 0.00
115 6 0.00
116 8 0.00
117 12 0.00
118 13 0.00
119 74 0.01
120 90 0.01
121 38 0.00
122 108 0.01
123 92 0.01
124 473 0.03
125 1855 0.13
126 3624 0.25
127 4441 0.30
128 1241 0.08
129 164 0.01
130 53 0.00
131 29 0.00
132 64 0.00
133 301 0.02
134 638 0.04
135 695 0.05
136 33 0.00
137 8 0.00
138 31 0.00
139 23 0.00
140 73 0.00
141 34 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (124 bp):
TTTTCAAAAGCTCACATGAGTTGGTGGCAACTTTTTAAAATGCTACACGAGTTGGTGGCAACCTT
TTCAAAAGCCACCCGAGTTGGTGGCAACCTTTTCAAAGTCATACGAGTTGTTGGCAACC
Found at i:137040 original size:709 final size:708
Alignment explanation
Indices: 135815--137396 Score: 1921
Period size: 709 Copynumber: 2.2 Consensus size: 708
135805 TTGGTAGCAC
* * *
135815 TTTT-AAAAGCCTACACGAGTTGATGGCAACCTTTTCAAAGGCCCACACGAATTGGTGGTAACCT
1 TTTTCAAAAGCCTACACGAGTTGGTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAACCT
** * * ** * *
135879 TTTTGAAAGTCCATAAGAGTTGGTGATAACCATTTCAAAGC-CACACGAGTTGTTAGCAACTTTT
66 TTTCAAAAGTCCACAAAAGTTGGTGGCAACCTTTTCAAAGCTCACACGAGTTGTTGGCAAC-TTT
* *
135943 TTAAAAGCCCAAATGAGTTGGTGACAACTTTTTCAATAACCCACATGAGTTGGTGGCAACCTTTT
130 TTAAAAGCCCACATGAGTTGGTGACAACTTTTTCAATAACCCACACGAGTTGGTGGCAACCTTTT
* * * *
136008 TAAAAGACCACACGATTTGGTGACAACTTTTTCAATGTTCACACAAGTTTGTGGCACCATAGTCA
195 TAAAAGACCACACGAGTTAGTGACAACCTTTTCAAGGTTCACACAAGTTTGTGGCACCATAGTCA
* * * *
136073 AAGTCCACAAGAGTTGATGGTAACTTTTTTAAAAATCTACACGAGTTGATGGCAGCCAATCAAAA
260 AAGTCCACAAGAGTTGACGGTAACATTTTCAAAAATCTACACGAGTTGATGGCAACCAATCAAAA
*
136138 GCCCACACGAATTGGTGGCAACCTTTTCAAAGTCCATATGAGTTGATGGCAACCTTTTCGAAAGC
325 GCCCACACGAATTGGTGGCAACCTTTTCAAAGTCCATATGAGTTGATGGCAACCTTTTCAAAAGC
* *
136203 CCACACGAGTTGTTGGTAGCCTTTTCAATAAGCCCACACGAGTTGATGGCAACCTTTTCAAAGTC
390 CCACACGAGTTGTTGGCAGCCTTTTCAATAAGCCCACACGAGTTGATGGCAACCTTTTCAAAGCC
* * * * * *
136268 CACATGAATTGGGCGTAACCTTTTCACAGCCCACACGAATTGGGGGCAATCTTTTCAAAGCCCAC
455 CAAAAGAATTGGGCG-AACCCTTTCAAAGCCCACACGAATTGAGGGCAACCTTTTCAAAGCCCAC
* * *
136333 ACGAGTTAATGGTAACCCTTTCAAAGTTTACACAAGTTTGTGGCACCATAGTCAAAGTCTAACAT
519 ACGAGTTAATGGTAACCCTTTCAAAGTTCACACAAGTTTGTGGCACCACAGTCAAAGTCCAACAT
* * * *
136398 TTTCAAAAACCCACACGAGTTCGTGGCA-ACTTTTCAAAGTCCACACAAGTTGTTGGCAACT-TT
584 TTTCAAAAACCCACACCAGTTCGTGGCAGACTTTTCAAAGTCCACAAAAGTTGGTGGC-ACTATA
* * * * *
136461 TTCAAAAGCCCACAAGAGTTGGCGGAAACCTTTTCAAAATCCT-ACACGAGTTTATGGCAATA
648 GT-AAAAGCCCACAAGAGTTGGCGGAAACATTCTCAAAA-CCTCACACGAGTTGATGGCAACA
* * *
136523 TTTTCAAAAGCCTGCACGAGTTGGTAGCAACCTTTTGAAAGGCCCAAACGAGTTGGTGGTAACCT
1 TTTTCAAAAGCCTACACGAGTTGGTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAACCT
** *
136588 TTTCAAAAGTCCACCCAAGTTGGTGGCAACCTTTTCAAAGCTCATACGAGTTGTTGGCAACTTTT
66 TTTCAAAAGTCCACAAAAGTTGGTGGCAACCTTTTCAAAGCTCACACGAGTTGTTGGCAACTTTT
* * ** *
136653 TCAAAAGCTCACATGAGTTGGTGACAACTTTTTTAA-AATGCACACGAGTTGGTGGGAACCTTTT
131 T-AAAAGCCCACATGAGTTGGTGACAACTTTTTCAATAACCCACACGAGTTGGTGGCAACCTTTT
* ** * *
136717 TAAAAG-CCTACATGAGTTAGTGGTAACCTTTTCAAGGTTCACACAAGTTTGTGGCATCGTAGTC
195 TAAAAGACC-ACACGAGTTAGTGACAACCTTTTCAAGGTTCACACAAGTTTGTGGCACCATAGTC
* * ** * **
136781 AAAGTCCACATGAGTTGGCGGTAACATTTTCAAATGTCTACACGAGTTGGTGGCAACCTTTTCAA
259 AAAGTCCACAAGAGTTGACGGTAACATTTTCAAAAATCTACACGAGTTGATGGCAACC-AATCAA
* * * * * *
136846 AAGCCCACCCGACTTGTTGGCAACTTTTTTAAAGTCCATATGAGTTGGTGGCAACCTTTTCAAAA
323 AAGCCCACACGAATTGGTGGCAACCTTTTCAAAGTCCATATGAGTTGATGGCAACCTTTTCAAAA
* * * *
136911 GCCCATACGAGTTGTTGGCAGCCTTTTTAA-AATCCTACACGAGTTGATGGCAACCTTTTCAAAG
388 GCCCACACGAGTTGTTGGCAGCCTTTTCAATAAGCCCACACGAGTTGATGGCAACCTTTTCAAAG
* *
136975 CCCAAAAGAGTTAAGGGC-AACCCTTTCAAAGCCCACACGAATTGAGGGCAACCTTTTTAAAGCC
453 CCCAAAAGAATT--GGGCGAACCCTTTCAAAGCCCACACGAATTGAGGGCAACCTTTTCAAAGCC
** * * *
137039 CACACGAGTTTGTGGTAACCTTTTCAAAGTTCACACGAGTTTGTGGCACCACAGTTAAAGTCCAA
516 CACACGAGTTAATGGTAACCCTTTCAAAGTTCACACAAGTTTGTGGCACCACAGTCAAAGTCCAA
* * * ** * * * *
137104 CATTTTTAGAAGCCCTTACCAGTTGGTGGCAGCCTTTTCAAAGTCTATAAAAGTTGGTGGCACTA
581 CATTTTCAAAAACCCACACCAGTTCGTGGCAGACTTTTCAAAGTCCACAAAAGTTGGTGGCACTA
* * * * * * * *
137169 TAGTGAAAGTCCACACGAGTTGGTGGCAACATTCTCAAAAGCTCACATGAGTTGATGGCAACC
646 TAGTAAAAGCCCACAAGAGTTGGCGGAAACATTCTCAAAACCTCACACGAGTTGATGGCAACA
* * * * * * *
137232 TTTTCAAAGGCCCACACGAGTTGGTAGCAGCCTTTTCAAA-GTCCACACAAGTTGTTGGTAATCT
1 TTTTCAAAAGCCTACACGAGTTGGTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAACCT
* * ** **
137296 TTTCAAAAG-CTCACATAAGTTGGTGGCAACTTTTTCAAAATTCAACACGAGTTGGCGGCAAAC-
66 TTTCAAAAGTC-CACAAAAGTTGGTGGCAACCTTTTCAAAGCTC-ACACGAGTTGTTGGC-AACT
* *
137359 TTTTAAAATCCCACATGAGTTGGT-AGCAACCTTTTCAA
128 TTTTAAAAGCCCACATGAGTTGGTGA-CAACTTTTTCAA
137397 AAGCCTATAC
Statistics
Matches: 739, Mismatches: 121, Indels: 28
0.83 0.14 0.03
Matches are distributed among these distances:
707 2 0.00
708 91 0.12
709 476 0.64
710 166 0.22
711 4 0.01
ACGTcount: A:0.30, C:0.22, G:0.20, T:0.28
Consensus pattern (708 bp):
TTTTCAAAAGCCTACACGAGTTGGTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAACCT
TTTCAAAAGTCCACAAAAGTTGGTGGCAACCTTTTCAAAGCTCACACGAGTTGTTGGCAACTTTT
TAAAAGCCCACATGAGTTGGTGACAACTTTTTCAATAACCCACACGAGTTGGTGGCAACCTTTTT
AAAAGACCACACGAGTTAGTGACAACCTTTTCAAGGTTCACACAAGTTTGTGGCACCATAGTCAA
AGTCCACAAGAGTTGACGGTAACATTTTCAAAAATCTACACGAGTTGATGGCAACCAATCAAAAG
CCCACACGAATTGGTGGCAACCTTTTCAAAGTCCATATGAGTTGATGGCAACCTTTTCAAAAGCC
CACACGAGTTGTTGGCAGCCTTTTCAATAAGCCCACACGAGTTGATGGCAACCTTTTCAAAGCCC
AAAAGAATTGGGCGAACCCTTTCAAAGCCCACACGAATTGAGGGCAACCTTTTCAAAGCCCACAC
GAGTTAATGGTAACCCTTTCAAAGTTCACACAAGTTTGTGGCACCACAGTCAAAGTCCAACATTT
TCAAAAACCCACACCAGTTCGTGGCAGACTTTTCAAAGTCCACAAAAGTTGGTGGCACTATAGTA
AAAGCCCACAAGAGTTGGCGGAAACATTCTCAAAACCTCACACGAGTTGATGGCAACA
Found at i:137302 original size:95 final size:95
Alignment explanation
Indices: 137174--156776 Score: 2853
Period size: 95 Copynumber: 205.3 Consensus size: 95
137164 CACTATAGTG
* * * *
137174 AAAGTCCACACGAGTTGGTGGCAACATTCTCAAAAGCTCACATGAGTTGATGGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * **
137239 AGGCCCACACGAGTTGGTAGCAGCCTTTTC
66 AGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * *
137269 AAAGTCCACACAAGTTGTTGGTAATCTTTTCAAAAGCTCACATAAGTTGGTGGCAACTTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
** * *
137334 AATTCAACACGAGTTGGCGGCAAACTTTT-
66 AGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * **
137363 AAAATCC-CACATGAGTTGGTAGCAACCTTTTCAAAAGCCTATACA--AGTGGGTGGTAAGGTTT
1 AAAGTCCACACA--AGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACCTTT
* *
137425 ACAAATGG-CCACACGAGTTGGTGG-TAACTTTTTC
62 TCAAA-GGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * *
137459 AAAGCCCAAACAAGTTGTTGGTAACCTTTTCAAAAGC-CA-ATAGGAGTAGGTGGCAACCTTTTC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACAT--GAGTTGGTGGCAACCTTTTC
** *
137522 AAAAATACACACGAGTTGGTGGC-AACTATTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACT-TTTC
** * * *
137554 AAAGTCCACATGAGTTGATGGCAAGC-TTTCAAAAG-TCCACAAGAGTTGGTGGCAACCTTTT-A
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTCA
* * * * *
137616 AAAGTCTACAAGAGTTAGTTGC-AACTGTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACT-TTTC
* * * * * ** * *
137647 AAAAG-CTTACACGAGTTAGCGGCAA-CTTTT-ACAATG-TCTACACCAATTGTTGGCAACCTTT
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCA-AAAGCTC-ACATGAGTTGGTGGCAACCTTT
* * *
137708 TCACAA-GTCCACATGAGTTGGTGGTAACCTTTTC
62 TCA-AAGGTCCACACGAGTTGGTGGCAAACTTTTC
** ** * * * * *
137742 AAAAGTTTACA-AGAGTTGGTGGCAACAGTTTCAAAAGC-CTATACGAGTTAGTGACAACTTTTT
1 -AAAGTCCACACA-AGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTT
* * *
137805 CGAA-GTCCACACTAGTTGTTGG-AAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAA-CTTTTC
* * * * * ** *
137837 AAAAGTCCACACGAGTTTGTGGCAAACTTTTCAAAATCCCACACAAGTTGGTGGTAACCTTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
137902 AA-ATCCCACACAAGTTCGTAGCAACCTTTTC
65 AAGGT-CCACACGAGTTGGTGGCAAACTTTTC
* * * * ** *
137933 AAAGGCC-CACATGAGTTGGTGGTAACCTTTTTAAAA-ATCAACCCGAGTCT-GTGGCAAACTTT
1 AAAGTCCACACA--AGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGT-TGGTGGCAACCTTT
* * * * *
137995 TTAAAAG-CTCGCATGAGTTGGTGGCAACCTTTTC
62 TCAAAGGTC-CACACGAGTTGGTGGCAAACTTTTC
* * * * * *
138029 AAAGTTCACACGAGTTTGTATCATAGTCAAAGTCCAACATTTTTAAAAGCTCACACGAGTTGGTG
1 AAAGTCCACACAAG-TTG-------GT----G-GCAACCTTTTCAAAAGCTCACATGAGTTGGTG
* * * ** * * * **
138094 GCAACCTTTTCCAA-GTCTATAAAAATTGGTAGC-ACCATAGTC
53 GCAACCTTTTCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * * * * ***
138136 AAAGTCCAAACAAGTTGCTTGCAACATTTTCAAAAGCCCATATAACTTGAAAGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * ** *
138201 AAGCCCACACGAGTTGGTGTCAGCCATTTTT
66 AGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * *
138232 AAA-ACTCACACAAGTTGATGGCAACCTTTTC-AATG-TGCACACGAGTTGGTGGCAACCTTTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT-
* * * * *
138294 AAAAGCCGAAAGGCCCACAAGAGTTGGTGGTAACCTTTTTA
63 ------C-AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * * * * *
138335 AAAGTCTACGA-GAGTTGGTGGCAAGCTTTTCAAAAGCCCACAAGAGTTAGTGACCACCTTTTGA
1 AAAGTCCAC-ACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
138399 AA-GTCAACACAAGTTGTTGGTAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * * * * ** *
138429 AAAAACGCACACGAGTTAGTGGTAACCTTTTCAAAATCGCAAACAAGTT-GTAGCAACCTTTTCA
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
*** * * *
138493 AAAACCCATA-GAGTTGGTGACAAATTTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAA-CTTTTC
* * * * * * * **
138524 AAAGTCAACACAAGTTGTTGGAAACTTTTTGAAAAGCCCACACGAGTTGGTTACAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * *
138589 A-GTCTACACGAGTTAGTGGCAACCTTTTC
66 AGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * * * ***
138618 AAA-ACCCCATAGGAGTTAGG-GGTAACCTTTTCAAAATCCCACACGAGTTCGTAATAACCTTTT
1 AAAGTCCACACA--AGTT-GGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTT
* * * * * *
138681 TAAAGGCCCACACGAGTTGGTAGTAACCTTTTTA
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * ** * *
138715 AAAGCCCACACGAGTTGGAGGCAAGCATTGT-AAAAG-TCCACGCGAGTTGGTGGTAACATTTTC
1 AAAGTCCACACAAGTTGGTGGCAA-CCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * * * * *
138778 -AATGCCCAAACGAGTTGTTGTCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * * * * **
138809 AAAAG-CTCATAGGAGATGGTGGCAA-CTTTT-ACACAGTTCGCA--CGTT-GTGGC-ACAATAG
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCA-AAAGCTCACATGAGTTGGTGGCAAC-CTTT
* * *
138867 TCAAA-GTCCATATGAGTTGGTGGCAACCTTTTC
62 TCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** ** * * * *
138900 AAAAATCCACATGAGTTATTGGTAA-CTATTTC-AAAG-TCCACACGAGTTAGTGGCAACC-TCT
1 -AAAGTCCACACAAGTTGGTGGCAACCT-TTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT
* ** * *
138961 CAAAAGTCCACAAAAGTTGGTGACAATCGTTTTAAAAGCCC
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTT-------C
* * ** *
139002 AAAAGGT-CACACAAATTGGGGGCAAAAATTTT--AAAG-TCCACGA-GAGTTGGTAGCAACCTT
1 -AAA-GTCCACACAAGTTGGTGGC-AACCTTTTCAAAAGCT-CAC-ATGAGTTGGTGGCAACCTT
* * * *
139062 TTCAAAAGTCTACAAGAGTTGGTGGCAACCTTTTC
61 TTCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * ** * * *
139097 AAAATCTCACACAAGTTGGAGGCAACCTTTTCAAAATCCCACACAAGTTAGTAGCAA-CTAGTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCT-TTTC
* * * * * *
139161 AAAAGCCCACACAAGTTGGGGGTAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * *
139193 AAAAGTCCACACGAGTTGATGGTAACCTTTTC-AAAGCCCACATGAGTCGTTGGCAACATTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC-
** * *
139257 AAAGG-CCACACGAGTTTATGGC-GACTTTTTA
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
** ** * * * *
139288 AAAAACACACACAAGTTGGTGGCAACCTTTTTGAAAGCCCACACGAGTTAGCGGCAACCTTTTCA
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* **
139353 AA-GTCCACACGAGTTAGG-GACATCCTTTTC
65 AAGGTCCACACGAGTT-GGTGGCAAACTTTTC
* * * * * ** * *
139383 AAAG-CCTACATAAGTTAG-GGCAACCTTTTC-AAAGCCCATACGAGTTATTAGTAACCTTTTCA
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* *
139445 AA-GTTCACACGAGTTGGTGG-AAATCTTTTAA
65 AAGGTCCACACGAGTTGGTGGCAAA-CTTTT-C
** * ** * * * ** * *
139476 AAAACCCAAACTTGTTGGTGCCAACCTTTTC-AATG-TCCACACGAGTTAATAGCAACATTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTCA
* * * * *
139539 AAAG-CTCACATGAGTTGGTGGTAACCTTTTT
65 AAGGTC-CACACGAGTTGGTGGCAAACTTTTC
* * * * ** * * * *
139570 AAAGGCCCTCACGAGTTGGTGGTAACAATTTC-AAAG-TCCACAGGAGTCGATAGCAA-CTTTTC
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * * *
139632 AAAAGCCAAAAGCCCACATGAGTTGGTGGCAACCTTTTAA
64 -AAAG------GTCCACACGAGTTGGTGGCAAACTTTT-C
* * * * * * * *
139672 AAAGTCTACGA-GAGTTGGTCGTAACATTTTCAAAAGCCCAAATGAGTTGGTGACAACCTTTTCA
1 AAAGTCCAC-ACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
** ** *
139736 AA-GTCCACATAAGTTATTGGCAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * *
139766 AAAAG-CTCACACAAGTTGGTGGCAACCTTTTCAAAATCCCGCATGAGTTGGTAGCAACCTTTTC
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* * *
139830 AAAAG-CTCACACGAGTTGGTGACAACCTTTTC
64 AAAGGTC-CACACGAGTTGGTGGCAAACTTTTC
* * ** * *
139862 AAAGTCCACACAAGTTGTTGGCAACATTTTTGAAAG-TCCACACGAGTTGGTGGTAACCTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTCA
* * *
139926 AA-G-CCTACACGAGTTGTTGGCAACCTTTTTA
65 AAGGTCC-ACACGAGTTGGTGGCAAAC-TTTTC
* * * * * *
139957 AAAG-CTCACACGAGTTCGTGGCAA-TTTTTACAAAAAC-CAACATGAATTGGTGGTAACCTTTT
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTT-CAAAAGCTC-ACATGAGTTGGTGGCAACCTTTT
* * * * * * * *
140019 TAAAAGCCCACAAGAGTTAGTGGTAACCTTTAC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * ** * * * * * * *
140052 AAAGTTCACACGAGTTTGTGGC-ACCATAGTC-AGAGTTTACATCAGTTGGTAGTAACTTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
140115 AAAG-CCTACAAGTGTTGGTGGTAACCTTTTC
65 AAGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * *
140146 AAAAGCCCACACAAGTTGGTGGCAACCATTTT--AAAG-TCCACACGAGTTGATGGCAACC-TTT
1 -AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT
* * * *
140207 CAAAAGTCTACAAGAGTTGGT-GCAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * ** * * * * *
140239 AAAAGCCCACA-AGAGTTAGAAGTAA-CTATTT-TAATG-TCCACACGAGTTGGTGGCAATCTTT
1 -AAAGTCCACACA-AGTTGGTGGCAACCT-TTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTT
* * * * * * *
140300 TGAAAAGTCTACAAGAATTGGTGGTAACCTTTTC
62 TCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * ** * *
140334 AAAAACGCACACGAGTTGGTAACAACCATTTT--AAAGTCTGCAC--CAGTTGTTGGCAACCTTT
1 AAAGTC-CACACAAGTTGGTGGCAACC-TTTTCAAAAG-CT-CACATGAGTTGGTGGCAACCTTT
* * *
140395 TAAAAAG-CTCACACGAGTTGGTGAC-AACTTTTTC
62 TCAAAGGTC-CACACGAGTTGGTGGCAAAC-TTTTC
* * * * * * * * *
140429 AAAATCTCGCACGAGTTGGTGGTAACCTTTTCAAAATCGCACACGTGTTGGTAGCAACCTTTTCA
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * *
140494 ATA-G-CCTACACGAGTTTGTGGTAACCTTTTC
65 A-AGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * * ** * *
140525 AAAAGTCCACACGAGTTGGTGGCAACCTTTT-TAAAGCCCACGCGAGTTGTTGGCAACCTTTTAA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* *
140589 AATGTCCACACGAGTTGGTGAC-AACATTTTC
65 AAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
** ** * **
140620 AAAACCCCACACGGGTTGGTAGCAACCTTTTCAAAA-CTCTACATGAGTTGGTGGCAACAATTTC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * *
140684 AAA-GTCCATA-GAAGTTGATGGC-AACCTTTC
64 AAAGGTCCACACG-AGTTGGTGGCAAACTTTTC
* * * *
140714 AAATGTCCATA-AGAGTTGGTGGCATCCTTTTCAAAAGCCTAGAAGCCCACAAGAATTGGTGGCA
1 AAA-GTCCACACA-AGTTGGTGGCAACCTTTTCAAAAG-CT-------CACATGAGTTGGTGGCA
* * * * * * * * *
140778 ACCATTTCAAA-GACCATACAAGTTAGTAGTAACCTTTTTA
56 ACCTTTTCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * ** * ** * *
140818 AAATTCTACA-ATAATTGGCAGCAACCTTTTCAAAAGCCCACCCGAGTTAGTGACAACCTTTTCA
1 AAAGTCCACACA-AGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
** * * * **
140882 AA-GTCTTCACAAGTTGTTGGCAACCTTTGA
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * * * *
140912 AAAG-CCTACATGAGTTAGTCGTAACCTTTTCAAAATGC-CACACGAGTTAGTGGCAA-CTTTTT
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAA-GCTCACATGAGTTGGTGGCAACCTTTTC
** * * * *
140974 AAAATTCCTATACAAGTTGGTAGCAACCTTTTC
64 AAAGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * * * ** * * *
141007 AAAGGCCCACACGAGTTGGTGGTAACATTTT-AAAAAATCTACACGAGTTAGTGGCAACCTTTTT
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * **
141071 AAAAGCCCACACGAGTTGGT-GTTAACTTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * *
141103 AAAATCGCACACGAGTTGGTAGCAACCTTTTCAAAAAC-C-CATAGAGTTGGTGACAACCTTTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACAT-GAGTTGGTGGCAACCTTTTC
* * ***
141166 AAA-GTCCACACAAGTT-ATTAAAAACTTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* ** ** * * *
141197 TAAAG-CAAACACGTGTTGGTGAAAACCTTTTC-AAAGTCCGCACA--AGTTGGTAGTAACCTTT
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAG--CTCACATGAGTTGGTGGCAACCTTT
* * *
141258 TCAAAAGGT-GACCCGAGTTGGTGGCAAATTTTTC
62 TC-AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * ** * * * * * **
141292 AAAATCTCACTCCAGCTCATGGCACCCGTTCCAAAATC-CAACATGAGTTGGTAGCATGCTTTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* ** * * * * * *
141356 AAAGG-CCTTCATTACTTAGTAGTAACCTTTTT
64 AAAGGTCC-ACACGAGTTGGTGGCAAACTTTTC
** * * * * * * *
141388 AAAACCCATA-AGAGTTGGTGGCAACCTTTGCAAAAG-TCCATATGAATTTGTGGTAACATTTTC
1 AAAGTCCACACA-AGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * * * *
141451 AAA-GCCCAAACGAGTCGTTGGCAATCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * * * **
141482 AAGAGCCCACAGGAGTTGGGGGCAACCTTTAC-AATGTTCACATGAGTTTGTGGC-ACCATAGTC
1 AA-AGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACC-TTTTC
* * **** * * *
141545 AAA-GCCCACA-TAGTCAAAGCCCACATGAGTTGGTGGC
64 AAAGGTCCACACGAGTTGGTG-GCA-A--ACTT--T-TC
** *** ** ***** * * * ** * * *** **
141582 AACCTTTTCA-AAAATCCACACAA-GTTATTGGGAACTATTTCAAAGTCCACACGAGTTGATGGC
1 AAAGTCCACACAAGTTGGTGGCAACCTT-TT--CAA-AAGCTCACA-T-GAGTTG-G-TG--GCA
* * ** * * *
141645 AACCTTTCAAAATTCCACAAGAGTTGGTGG-TAACTATTTTA
56 ACCTTTTCAAAGGTCCACACGAGTTGGTGGCAAAC--TTTTC
* * *** ** **
141686 AAAGCCCAAAAGGTCACACGAATTGGTGGCAAAAATTT--ATTG-TCCACGCGAGTTGGTGGCAA
1 AAAGTCC---A---CACA--AGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAA
* * * * * *
141748 CCTTTTAAAAAGTCTACAAGAGTTGGTGGTAACCTTTTC
57 CCTTTTCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * **
141787 AAAAG--C-C-CATGTTGGTAACAACCTTTTC-ATAGTCTGCACA--AGTTATTGGCAACCTTTT
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACCTTTT
* * * * *
141845 CAAAAGCCCACA-GAGTTGCTGAC-AACTTTATT
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTT-TC
* * * * * * * * * **
141877 AAAATCTCGCACGAGTTGGTGGTAACCTTTTCAAAATCTCACATGTGTTGGTAGCTACATTTTTG
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * *
141942 AAGG-CCTACACGAGTTTGTGGTAACCTTTTC
65 AAGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * * ** * *
141973 AAAAGTCCATACGAGTTGGTGGCAACCTTTTC-AAAGCCCACGCGAGTTGTTGGCAACCTTTTAA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * *
142037 AAAGTCCACATGAGTTGG-CG-ATAACATTTTCC
65 AAGGTCCACACGAGTTGGTGGCA-AAC-TTTT-C
* *** * * * * * *
142069 AAAGCCCACTTGAGTTGGTAGCAAACTTTTCAAAAG-T-AGGCACGAGTTGGTCGCAGCTTTTTT
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCA--CATGAGTTGGTGGCAAC-CTTTT
* * * * *
142132 TAAA-GCCCACATGAGTTGATGTC-AACTTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* ** ** * ** *
142164 AAAGTCTACATGAGAAGGTGGCAACCTTTTCAAAAGTCCAAAAGCCCACACAAGTTGGAGGCAAC
1 AAAGTCCACACAAGTTGGTGGCAACC-TTT------T-CAAAAGCTCACATGAGTTGGTGGCAAC
* * *** *
142229 CATTTCAGA-GTTTGCATGAGTTGGTGGC-AACATTTTC
58 CTTTTCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * * ** *
142266 AAAACTCTACGA-GAGTTGGTCGTAACCTTTTCAAAAGCCCACACAAGTTGGTGGCAACTTTTTC
1 -AAAGTCCAC-ACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* ** * *
142330 AAA-GTCTACATAAGTTGTTGGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * * ***
142361 AAAAG-CTCACACAAATTGATGACAACATTTTCAAAATC-CTGCATAAGTTGGCAACAACCTTTT
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTT
* * * * * *
142424 CAAAAG-CTAACATGAGTTGGTGACAACCATTTC
63 CAAAGGTC-CACACGAGTTGGTGGCAAACTTTTC
* * * * * *
142457 AAAGTGCACACAAGTTGTTGGCAACATTTTCAAAAGTTCACACGAGTTGGTGGTAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * *
142522 A-G-CCTACACGAGTTGTTGGCAACATTTTTA
66 AGGTCC-ACACGAGTTGGTGGCAA-ACTTTTC
* * * * * * * *
142552 AAAG-CTCACACGAGTTGATGGTAA-CTTTTACAAAAACCCACACGAGTTAGTGGCAACCTTTTG
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTT-CAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* *
142615 AAAAG-CCACACGAGTTAGT-G-ATAACTTTTTC
64 AAAGGTCCACACGAGTTGGTGGCA-AAC-TTTTC
* * ** * * * * * * * *
142646 AAAATCCGGCATGAGTTGGGGGTAACCTTTTGAAAATCCCACACGTGTTGGTAGCAACCTTTTCA
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * *
142711 AAGG-CCTACACAAGTTTGTGG-TAACTTATTC
65 AAGGTCC-ACACGAGTTGGTGGCAAACTT-TTC
* * * * * *
142742 AAAAGTCCACACAAGTTGCTAGCAACCTTTTC-AAAGC-C-TATGCGAGTTGTTAGAAACCTTTT
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACAT--GAGTTGGTGGCAACCTTTT
* * *
142804 AAAAAGTCCACACGAGTTGGTGG-TAACTTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
** * * *
142837 AAAAACCCACACGAGTTGGTAGCAACCTTTTCAAAA-CTCTACATGAGTTGGTGGTAA-CTATTT
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCT-TTT
* * * * * * *
142900 TAAA-GTCTATAAGAGTTGAT-GCCAACCTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * *
142931 AAAAGTCTACA-AGAGTTGGTGGCAACCTTTTCAAAAGCCTAAAAGCTCACACGAATTGGTGGCA
1 -AAAGTCCACACA-AGTTGGTGGCAACCTTTT-------C-AAAAGCTCACATGAGTTGGTGGCA
* * ** * *
142995 ACCATTTCAAA-GTCCACACGAGTTAGTGATAACCTTTTTA
56 ACCTTTTCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * ** *
143035 AAATTCTACA-ATAGTTGTTGGCAACCTTTTCAAAAGCGCACCCGAGTTGGTGGTAACCTTTTCA
1 AAAGTCCACACA-AGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* ** * *
143099 AA-GTCTACATAAGTTGTTGGCAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * ** * * *
143129 AAAAGCCCAAACGAGTTGGTGATAACCTTTTCAAAATCCCACACGAGTTGGTGGCAACCTTTT-A
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * *
143193 AA-ATCCTACCCGAGTTGGTAGC-AACTATTTC
65 AAGGTCC-ACACGAGTTGGTGGCAAACT-TTTC
* * * * * * * *
143224 AAAGGCCCAAACGAGTTGGTGGTAACATTTTCAAAA-ATCCACACGAGTTGGTGGCAACCTTTTT
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * * * *
143288 AAAAGCCCACATGAGTTGGTGGTAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * ** * * * ** * *
143320 AAAGTTCACATGAGTTTGTGGC-ACCATAGTC-AAAGTCTAACAT--TTTCAGAAGC-TCGC-AT
1 AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAG-CTCACATGAGTT-GGTGGCAAC-CTTT
** * * * * * *
143379 T-AGTTGGTGGCA-AC--CTT--T-TCAAAGTCTATA
62 TCA-AAGGT-CCACACGAGTTGGTGGCAAACT-TTTC
* ** * * * *** * * **
143409 AAAGTTGGTGGCAC-CATAGTCAAAGT-CCACACGAGTTAGTGGCAACATTTTCAAAAGCCCACA
1 AAA----GT-CCACACA-AGT--TGGTGGCA-AC--CTT--T-TCAA-AAGCTCACATG---AGT
* ** ** *** * * * * * * *
143472 TGAGTTGATG-AGAACCATTTCAAAAGCC-CA-TACG-AGTTGGTAGCAGTCTT-
48 TG-G-TG--GCA-ACCTTTTCAAAGGTCCACACGA-GTTGGTGGCA-AACTTTTC
** ** * * * *** * *** ** ** * ** *
143522 -ATTTAAAGCCCACA--TGCATTG-ATGGTGACCTTTTCAAAGTC-CAT-ACATGTTGGTGGCAA
1 AAAGTCCA-CACA-AGTTG-GTGGCAACCT---TTTCAAAAGCTCACATGAGTTGGT-G-GCAAC
* ** *** * ***
143581 CATTTTCAAAAGCC-CACGCGAGTTAG-AAAAAACCTTTTC
58 CTTTTCAAAGGTCCACAC--GAGTTGGTGGCAAA-CTTTTC
* * * * * * * *
143620 AAAGTCAACATAAGTTGCTAGCAATCTTTTCAAAAGCTCACAGGATTTGTTGGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * * *
143685 A-ATCATACACGAGTTAGTAGCAATCTTTTC
66 AGGTC-CACACGAGTTGGTGGCAAACTTTTC
** * ** * * *
143715 AAAAACC-CACAGTGTTGGTGAG-AACCTTTTC-AAAG-TCCACACAAGTTGTTGGAAACTTTTT
1 AAAGTCCACACA-AGTTGGTG-GCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT
* * * *
143776 CAAAAGCCCACACGGGTTGGTGAC-AACGTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * *
143809 AAAATCCACACAAGTTGTTGGTAACCTTTTCAAAAGC-CTACACGAGTTGGTGGCAACCCTTTT-
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAA-CCTTTTC
*
143872 AAA-ATCC-CACTAGAGTTGGT---AATACCTTTTC
64 AAAGGTCCACAC--GAGTTGGTGGCAA-A-CTTTTC
* * *** * * * * * * *
143903 AAAATCCCACACGAGTTGGTAAAAACCATTTCTAAGGCCCACACGAGTTGGTGGTGACCCTTTT-
1 AAAGT-CCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGG-CAACCTTTTC
* ** *
143967 AAAGGGCCACACGAGTTGGTGGCACCCTTTGC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * ** * * * *
143999 AAAAGTCCACACGAGTTGGTGACAAGATTTTC-AAAGCCTAAACA--CGTTGTTGGCAACTTTTT
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACCTTTT
* * * * *
144061 CAAAAGCCCACTA-GAGTTGTTGGCAACCTTTAC
63 CAAAGGTCCAC-ACGAGTTGGTGGCAAACTTTTC
* ** ** ** * * * **
144094 AAAGTTCACATGAGTTTATGGC-ACCATAGTCAAAATC-CACACGAGTTGG-GTGTAATATTTTC
1 AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAGCTCACATGAGTTGGTG-GCAACCTTTTC
* * * * *
144156 AAAAG-CCGACACGAGTTGCTGGTAACCTTTTT
64 AAAGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * ** *** * ****
144188 AAAGTCTATACAAGTTGGCAGC-ACCACAATC-AAAG-TCCACACGAGTTGGTGGCAACAAAGTC
1 AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* *
144250 AAA-GTCCACACAAGTTGGCGGC-AACATTTTCC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTT-C
* ** * ** * ** * * **
144282 AAAGCCCACATGAGTTGGTAGCAACCTTTTCAAAAGCAGACACGAGTTGGACGCAGCTTTTTTTT
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAAC-CTTTTCA
* * * *
144347 AA-GCCCACACGAGTTGATGTCAATCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * ** * **
144377 AAAG-CACACACGAGATGGTGGCAACCTTTTCAAAGGTCTAAAAGCCCACACAAGTTGGAGATAA
1 AAAGTC-CACACAAGTTGGTGGCAACC-TTT------TC-AAAAGCTCACATGAGTTGGTGGCAA
* *** *
144441 CCATTTCAAA-GTTTGCACGAGTTGGTGGCAATA-TGTTC
57 CCTTTTCAAAGGTCCACACGAGTTGGTGGCAA-ACTTTTC
* * * * * * * *
144479 AAAAGTCTACGA-GAGTTGGTCGCAACCTTTTCAAAAGCCCAAACGAGTTGGTGACAACTTTTTC
1 -AAAGTCCAC-ACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
** *
144543 AAA-GTCCACTA--AGTTATTGGCAACCTTTTC
64 AAAGGTCCAC-ACGAGTTGGTGGCAAACTTTTC
* * *
144573 AAAAG-CTCACA-AAGTTGGTGGCAACCCTTTCAAAATCTCACATGAGTTGGTAGCAACCTTTTT
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACC-TTTT
* * * *
144636 GAAAGCT-CACACGAGTTGGTGACAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * *
144668 AAAGTCCACACAAGTTGTTGGCAACATTTTCAAAAG-TCCACACGAGTTGGTGGCAACCTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTCA
* * * * *
144732 AA-G-CCTACACAAGTTGTTAGCAACCTTTTTA
65 AAGGTCC-ACACGAGTTGGTGGCAAAC-TTTTC
* ** * * * *
144763 AAAG-CTCTCATGAGTTGGTGGTAA-CTTTTACAAAAACCCACACGAGTTGGTGGCAACCTTTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTT-CAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* ** * * **
144826 AAA-GTTCACACGAGTTTATGG-TACCATAGTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * *** * * * * * *
144857 AAAGTCTACACGAGTTGGTAATAATCTTTCCAAAAGC-CTACACGTGTTGGTGGTAACCATTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTCA
* * * * *
144921 AAAGCCCACACGAATTGGTGGCAACCATTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * **
144952 AAAAGT-----C---TTGATGGCAACC-TTTCAAAAG-TATACAAGAGTCAGTGGCAACCTTTTC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * ** *
145007 AAAAGCCCAAAAGCCCACAAGAGTTGGAAG-TAACTATTTC
64 -AAAG-------GTCCACACGAGTTGGTGGCAAACT-TTTC
* * ** * * * *
145047 AAAATGCACATGAGTTGGCGGCAACC-TTTCGAAAAG-TCTACAAGAGTTGGTGGTAACCCTTTC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTC-AAAAGCTC-ACATGAGTTGGTGGCAA-CCTTTT
** *
145110 CAAAGG-CCACACGAGTTGGTAACAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * *
145142 AAAGTCTACACAAGTTGTTGGCAACCTTTTGAGAAGCCCACATGAGTTGGTGACAA-CTTTGTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTT-TCA
* * *
145206 AA-ATCCCACACGAGTTGGTGGTAACCTTTTC
65 AAGGT-CCACACGAGTTGGTGGCAAACTTTTC
* * * * * * * *
145237 AAAATCC-CACACGTATTGGTAGCTACTTTTTCAAAGGC-CTACACGAGCTT-GTGGTAACCTTT
1 AAAGTCCACACAAG--TTGGTGGCAACCTTTTCAAAAGCTC-ACATGAG-TTGGTGGCAACCTTT
* * *
145299 TCAATA-GTCCGCACAAGTTGGTGGCAATCTTTTC
62 TCAA-AGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * * * * * * *
145333 AAAG-CCGATGCGAGTTGTTAGCCACCTTTTAAAAAGCCCACACGAGTTAGTGGTAACCTTTTCA
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
*** * *
145397 AAAACCCACACGAGTTGGTGGCAACCTTTTA
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * * *
145428 AAAATCTTATACCAGTTGGTAGCAACCTTTTTAGAAGGTCACACT-AGTTGGTGGCAACCTTTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACA-TGAGTTGGTGGCAACCTTTTC
* * ** * **
145492 AAA-GTCTATAAAAGTTGGTGGC-ACCATAGTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * *
145523 AAAGTCCACACGAGTTAGTGGCAACATTTTCAAAAGCCCACATGAGTTGATAGG-AA-TTATTTC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGT-GGCAACCT-TTTC
* * * ** *
145586 AAAAGCCCACACGAGTTGGTAGCAGCCTTATTT
64 AAAGGTCCACACGAGTTGGTGGCAAACTT-TTC
** * * * *
145619 AAAGTCCACACGCGTTGATGGCAACCTTTTC-AAAG-TCCACATGTGTTAGTGGC-ACCCTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC-
* * * * * * *
145681 AAAGCCTAAAAGCCCATAAGATTTTGTGGTAACCTTTTC
64 AAAG-------GTCCACACGAGTTGGTGGCAAACTTTTC
* * * ** * * ** *
145720 AAAAGTCTACGA-GAGTTGGTGGCAACCTTTTCAAAAGCCCATGTGAGCTAGTAACAACATTTTC
1 -AAAGTCCAC-ACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* * ** * *
145784 AAA-GTCAATATAAGTTGTTGGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * ** * *
145815 AAAATCCCACACTAGTTGGTGGCAACCTTTTCAAAATCGCACATGAGTTACTAGCAATCTTTTCA
1 AAAGT-CCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
*** * * *
145880 AAAACCCACA-GTGTTGGTGACAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * * * **
145910 AAAGTCCACACAAGTTATTGGAAACTTTTTCAAAAGC-CATACGGGTTGGTGAAAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* ** * *
145974 A-ATCCACAAAAGTTGTTGGCAACCTTTTC
66 AGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * ** *
146003 AAAAG-CCTACACAAGTTGGTGGCAACCTTTTTAAAATCCCAC-TCGAGTTGGTAAC-ACCATTT
1 -AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACAT-GAGTTGGTGGCAACCTTTT
* * ** *
146065 CAAA-ATCTCACATGAGTTGGTAACAACCTTTTC
63 CAAAGGTC-CACACGAGTTGGTGGCAAACTTTTC
* * * * * * * * *
146098 TAAGGCCCACACGAGTTGGTGGTAATCTTTTCAATAGCATACACA--AGTTGGTGGTACCCTTTG
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGC-T-CACATGAGTTGGTGGCAACCTTTT
* * *
146161 CAAAAGTCCACACGAGTTGGTGGTAAGA-TTTTT
63 CAAAGGTCCACACGAGTTGGTGGCAA-ACTTTTC
* * * * * * *
146194 AAAGCCCAAACACGTTGTTGGCAACTTTTTCAAAAG-TCCACACGAGTTGGTGGCAACCTTTACA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTCA
* ** * **
146258 AA-GTTCACACGAGTTTATGGC-ACCATAGTC
65 AAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * ** * * * * * *
146288 AAAGTCCACACGAGTTGG-GTGTAATATTTTCAAAAGC-CGGCACGAGTTGCTGGTAACATTTTT
1 AAAGTCCACACAAGTTGGTG-GCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * * * * **
146351 AAA-GTCTATACAAGTTAGTGGC-ACCATAGTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * **** * *
146382 ATAGTACACACGAA-TTGGTGGCAACAAAGTC-AAAG-TCCACACGAGTTGGTGGCAACATTTTC
1 AAAGTCCACAC-AAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * ** * *
146444 AAAAGCCCACATAAGTTGGTAGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * ** * * * * *
146476 AAAAG-CAAACACGAGTTGGTCGCAGCTTTTTTTAAAGCCCACACGAGTTGATGTCAATCTTTTC
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* * * * *
146540 AAA-GCCCACACAAGTTGGAGGCAACCATTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
*** * * * *
146571 AAAGTTTGCACGAGTTGGTGGCAACATGTTCAAAAG-TCTACGA-GAGTTGGTCGCAACCTTTTC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-AC-ATGAGTTGGTGGCAACCTTTTC
* * * * *
146634 AAAAGCCCAAATGAGTTGGTGAC-AACTTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* ** * *
146666 AAAGTCCAC-TAAGTTATTGGCAACCTTTTCAAAAGCTCACA-AAGTTGGTGGCAACCCTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * * *
146729 A-ATCCCACATGAGTTGGTAGCAACCTTTTTG
66 AGGT-CCACACGAGTTGGTGGCAAAC-TTTTC
* * ** * *
146760 AAAG-CTCACACGAGTTGGTGACAACCTTTTC-AAAG-TCCACACAAGTTGTTGGCAACATTTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* *
146822 AAAAGTCCACACGAGTTGGTGGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * *
146854 -AAGGCCTACACAAGTTGTTAGCAACGTTTTTAAAAGCTCTCATGAGTTGGTGGTAA-CTTTTAC
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTT-C
*** * * *
146917 AAAAACCCACACGAGTTGGTGGTAACCTTTTTA
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * ** * **
146950 AAAGCCCATACGAGTTGGTGGTAACCTTTTC-AAAGTTCACATGAGTTTATGG-TACCATAGTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACC-TTTTCA
* *** * *
147013 AA-GTCTACACGAGTTGGTAATAATCTTTCC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * * * *
147043 AAAAG-CCTACACGTGTTGGTGGTAACCATTTCAAAAGCCCACACGAGTTAGTGGCAACCATTTC
1 -AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* * *
147107 AAAAGT-----C---TTGATGGC-AACCTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * ** *
147130 AAAAGTCTACA-AGAGTCGGTGGCAACCTTTTCAAAAGCCCAAAAGCCCACAAGAGTTGGAAGTA
1 -AAAGTCCACACA-AGTTGGTGGCAACCTTTT--------CAAAAGCTCACATGAGTTGGTGGCA
* * * *** *
147194 A-CTATTTCAATA--TGCATATGAGTTGCCAGC-AACCTTTC
56 ACCT-TTTCAA-AGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * **
147232 GAAAAGTCTACA-AGAGTTGGTGGTAACCCTTTTCAAAGGC-CACACGAGTTGGTAACAACCTTT
1 --AAAGTCCACACA-AGTTGGTGGCAA-CCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTT
* * ** * *
147295 TCAAA-GTCTACACAAGTTTTTGGCAACCTTTTG
62 TCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * *
147328 AGAAGCCCACATGAGTTGGTGAC-ACCTTTGTCAAAATCCTGCAC--GAGTTGGTAGTAACCTTT
1 A-AAGTCCACACAAGTTGGTGGCAACCTTT-TCAAAA-GCT-CACATGAGTTGGTGGCAACCTTT
* * * * *
147390 TCAAA-ATCCCACAC-ATATTGGTAGCTACCTTTTC
62 TCAAAGGT-CCACACGA-GTTGGTGGCAAACTTTTC
* * * * * * *
147424 AAAGGCCTACACGAGTTTGTGGTAACCTTTTCAAAAGTCCGCACA--AGTTGGTGGTAATCTTTT
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAG--CTCACATGAGTTGGTGGCAACCTTTT
* *** * * * *
147487 CAAA-GCCCATGTGAGTTGTTAGCAATCTTTTAA
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTT-C
* * ** * * * * *
147520 AAAGCCCACACGAGTTGGTGATAACCTTTTTAAAAACCCACACGAGTTGGGGGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * *
147585 A-ATCCTATACGAGTTGGTAGCAACCTTTTC
66 AGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * * * * ** * * * *
147615 AAAGGCCCATACGAGTTGGTGGTAACATTTTCAAAAATTCGCACGAGTTTGTGGCAACCTTTTTA
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * * *
147680 AATGCCCACATGAGTTTGTGGTAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * ** * ** * * * **
147711 AAAGTTCACAGGAGTTTGTGGC-ACCATAGTC-AGAG-TC-CAACA-TT--T-TCAAAACGTCAC
1 AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAGCTCACATGAGTTGGTGGC-AACCTTTTC
* * * * * *
147768 ACAAGTTGGTGGCA-AC--CTT--T-TCAAAGTCTATA
64 A-AA---GGT-CCACACGAGTTGGTGGCAAACT-TTTC
* ** * * * *** * * *
147800 AAAGTTGGTGGCAC-CATAGTCAAAGT-CCACACGAGTTAGTGGCAACATTTTCAAAAGCCCACA
1 AAA----GT-CCACACA-AGT--TGGTGGCA-AC--CTT--T-TCAA-AAGCTCACATG---A-G
* *** * * ** *** * * * * * **
147863 TTAGTTAATAGGAACTATTTCAAAAGCC-CAC-ACG-AGTTGGTAGCAGCCTTAT
47 TT-GGTGGCA--ACCTTTTCAAAGGTCCACACGA-GTTGGTGGCA--AACTTTTC
** ***** * * * * * *
147915 TTAAAGTCCACACGCGTTGATGGAAACCTTTTC-AAAG-TCCACATGTGTTAGTGGCAACCCTTT
1 AAAGTCCACACA--AGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT
* * * * * * *
147978 CAAAAGCCCAAAAGCCCATAAGATTTTGTGGTAACCTTTTC
63 C-AAAG-------GTCCACACGAGTTGGTGGCAAACTTTTC
* * * * ** *
148019 AAAAGTCTACGA-GAGTTGGTGGCAACCTTTTCAAAAGC-C-CATGCGAGCTAGTAACAACATTT
1 -AAAGTCCAC-ACAAGTTGGTGGCAACCTTTTCAAAAGCTCACAT--GAGTTGGTGGCAACCTTT
* ** *
148081 TCAAA-GTCAACATAAGTTGTTGGC-AACTTTTTC
62 TCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * * * *
148114 AAAAGCCCACACTAGTTTGTGGCAACCTTTTCAAAATCGCACATGAGTTAGTAGCAATCTTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
*** * * *
148179 AAAACCCACA-GTGTTGGTGACAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * * * **
148209 AATGTCCACACAAGTTATTGGAAACTTTTTCAAAAGCCCACACGGGTTGGTGAAAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * *
148274 A-ATCCACACAAGTTGTTGGCAACCTTTTC
66 AGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** *
148303 AAAAG-CCTACACAAGTTGGTGGCAACCCTTTT-AAAATC-CTAC-TCGAGTTGGTAAC-ACCAT
1 -AAAGTCC-ACACAAGTTGGTGGCAA-CCTTTTCAAAAGCTC-ACAT-GAGTTGGTGGCAACCTT
* ** *
148363 TTCAAA-ATCTCACATC-AGTTGGTAACAACCTTTTC
61 TTCAAAGGTC-CACA-CGAGTTGGTGGCAAACTTTTC
* * * * * * * * * *
148398 TAAGGCCCACACGAGTTGGTGGTAATCTTTTCAATAGCAT-ACACGAGTTGGTGGTACCCTTTGC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGC-TCACATGAGTTGGTGGCAACCTTTTC
* *
148462 AAAAGTCCACACGAGTTGGTGGCAAGA-TTTTT
64 AAAGGTCCACACGAGTTGGTGGCAA-ACTTTTC
* * * ** * * * * *
148494 AAAGCCCAAACACGTTATTGGAAACTTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTACAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * * **
148559 A-GTTCAAATGAGGTT-GTGGCACCAC-AGTC
66 AGGTCCACACGA-GTTGGTGGCA-AACTTTTC
* * * ** * * * * * *
148588 AAAGTCTACACGAGTTGG-GTGTAATATTTTCAAAAGCCCACACGAGTTGCTAGTAACCTTTTTA
1 AAAGTCCACACAAGTTGGTG-GCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
** ** * * * **
148652 AA-GTTTATGCAAGTTGGCGGC-ACCATAGTC
65 AAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* **** * *
148682 AAAGTCCACAC-GGATTGGTGGCAACAAAGTC-AAAG-TCCACACGAGTTGGTGGCAACATTTTC
1 AAAGTCCACACAAG-TTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * ** * *
148744 AAAAGCCCACATAAGTTGGTAGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * ** * * ** *
148776 AAAAG-CAAACACGAGTTGGTTG-TAGCTTTTTTAAAGC-CTACACGAGTTGATATCAATCTTTT
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTT
* *
148838 CAAA-GTTCACACGAGATT-GTGGCAACCTTTTC
63 CAAAGGTCCACACGAG-TTGGTGGCAAACTTTTC
* * * * *
148870 AAAGGTCCAAAAGCCCACACAAGTTGGAGGCAATCATTTC-AAAGTTTGCACA--AGTTGATGGC
1 AAA-GT--------CCACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGC
** * * ** * *
148932 AATATTTTCAAAAGTCTACGA-GAGTTGGTCACAACCGTTTC
55 AACCTTTTCAAAGGTCCAC-ACGAGTTGGTGGCAAACTTTTC
** * * *
148973 AAAAG-CTCACATGAGTTGGTGGCAACCTTTTCGAAATC-CTACATGAGTTGGTAGCAACCTTTT
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTT
* * *
149036 CAAAAG-CTCACACAAGTTGGTGGCAACCTTTTC
63 CAAAGGTC-CACACGAGTTGGTGGCAAACTTTTC
* ** * * * *
149069 AAAATCCTACATGAGTTGGTAGCAACCTTTCCAAAAGCTCACACGAGTTGGTGACAACCTTTTCA
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* *
149134 AA-GTCCACACAAGTTGTTGGCAATA-TTTTC
65 AAGGTCCACACGAGTTGGTGGCAA-ACTTTTC
* * * * * **
149164 AAAAGTCTATA-AGAGTTTGTGGCAACCTTTTCAAATGCTTAAAAGCCCACAAGAGTTGGAAGCA
1 -AAAGTCCACACA-AGTTGGTGGCAACC-TTT----T-C--AAAAGCTCACATGAGTTGGTGGCA
* * * * *
149228 A-CTATTT-TAATGTCCATACGAGTTGGTGGTAATA-TTTTGA
56 ACCT-TTTCAAAGGTCCACACGAGTTGGTGGCAA-ACTTTT-C
* * * * ***
149268 AAAGTCTACA-AGAGTTGGTGGTAACCTTTTCAAAAGCTTACACGAGTTGGTAATAACCTTTTCA
1 AAAGTCCACACA-AGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
** * * * **
149332 AA-GTCTGCACAAGTTGTTAGCAATTTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* *** *** * * * * * * *
149362 GAAAGCCCACTTGAGTTGGTAATAACTTTTTCAAAATCCCGCACGAGTTAGTGGTAACCTTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
149427 AA-ATCCCGCACGTGTTGGTAGCAACCTTTTC
65 AAGGT-CCACACGAGTTGGTGGCAAACTTTTC
* ** * * * *
149458 AAAGGCCTACATGAGTTTGTCGTAACCTTTTCAAAAG-TCGACACGAGTTGGTGGCAACCTTTTC
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* ** * * **
149522 AAA-GCCCACGTGAGTTGTTGGCAACCATTTAA
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * *
149554 AAAGTCCACACAAGTTAGTGGCAACCTTTTCAAAAACCCACACGAGTTGGTAGCAACTTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
** *
149619 AACTCTACACGAGTTGGTGGC-AACTATTTC
66 AGGTCCACACGAGTTGGTGGCAAACT-TTTC
* * * *
149649 AAAGTCCATAGGAA-TTGATGGCAACC-TTTCAAAAG-TCCACAAGAGTTGGTGGCAACCTTTTC
1 AAAGTCCACA-CAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * * * *
149711 AAAAGCCTAAAAGCCCACACGAATTGGTGGTAACCATTTC
64 -AAAG-------GTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * *
149751 AAAGTCCACACGAGTTAGTGGTAACCTTTTTAAAA-TTCTATAAT-AGTTGGTGCCAACCTTTTC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-A-CATGAGTTGGTGGCAACCTTTTC
* * * * ** *
149814 AAAAGCCCACCCGAGTTAGTGATAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * *
149846 AAAATCCACACAAGTTGTTGGCAACCTTTTCACAAGCCCACACGAGTTGGTGGTAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * *
149911 A-ATCCCACTCGAGTTGGTGGGAACCTTTTC
66 AGGT-CCACACGAGTTGGTGGCAAACTTTTC
* ** * * * * * * * ** *
149941 AAAATCCTACATGAGTTAGTAGCAACATTTTCAAAGGCTTACACGAGTTGGTGGTAATATTTTTA
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
** ** * * * *
150006 AAAATATACATGAGTTAGTGGCAACATTTTTA
65 AAGGTCCACACGAGTTGGTGGCAA-ACTTTTC
* * * * * * **
150038 AAAG-CCA-ACATGAGTTGCTAGCAACCTTTTCAAAGGCCCACACGAGTTGGTGGTAATATTTTC
1 AAAGTCCACACA--AGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
** * ** *
150101 AAAAATCTACATAAGTTGGTGGC-AACTATTTTA
64 AAAGGTCCACACGAGTTGGTGGCAAAC--TTTTC
* ** * * * ** * **
150134 AAAGCCCACATGAGTTGGTGGTAACCTTTTC-AAAGTTCACACGAGTTTTTAGC-ACCATAGTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACC-TTTTCA
* * **
150197 AA-GTCTA-AC-A-TT--T-TCAGAAGC-TCAC
65 AAGGTCCACACGAGTTGGTGGCA-AA-CTTTTC
* ***** * * ** * *
150222 ATTAGTTGGTGGCAACCTT--T-TCAAAGTCTAT-AAAAG------T----TGGTGGC-ACCATA
1 A-AAG-TCCACACAA-GTTGGTGGCAACCT-TTTCAAAAGCTCACATGAGTTGGTGGCAACC-TT
* * *
150272 GTCAAA-GTCCACACGAGTTCGTGG-TAACATTTTC
61 TTCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* ** * * * * ** * * *
150306 AAATGCCCACATGAGTTGATGGGAACCATTTCAAAAGCCCACGCGAGTTGGTAGCAGCCTTATCT
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC-
* * *
150371 AAA-GCCCACACGCA-TTGATTGC-AACATTTTC
64 AAAGGTCCACACG-AGTTGGTGGCAAAC-TTTTC
* * * *
150402 AAAGTCCACACATGTTGGTGGCAACCTTTTCAAAAGCCCAAAAATCCATACGAATTGGTGGTAAC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC----A--CAT--GAGTTGGTGGCAAC
* ** *
150467 CTTTTCAAAAGTCTGCGA-GAGTTGGTGGCAACCTTTTC
58 CTTTTCAAAGGTCCAC-ACGAGTTGGTGGCAAACTTTTC
* * * * *** * * * *
150505 AAAAGTCTACGCGAGTTAGTAATAACCTTTTC-GAAG-TCAACATAAGTTGTTGGCAACATTTTC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * *
150568 AAAAGCCCACACGAGTTGGTGGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * * *
150600 AAAATCGCACATGAGTTGGTGGCAATCTTTTAAAAAACAT-ACA-GTGTTGGTGACAACCTTTTC
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGC-TCACATGAGTTGGTGGCAACCTTTTC
* *
150663 AAA-GTCCACACAAGTTGTTGG-AAACTTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * ** ** * ** *
150694 AAATGCCCAGACGGGTTGGTAACAACCTTTTCAAAATC-CACACAAGTTGTTGGCAACCTTTTCA
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
150758 AAAGCCCAAACGAGTTAGTGGCAACCCTTTT-
65 AAGGTCCACACGAGTTGGTGGCAA-ACTTTTC
* * * * **
150789 AAAGTCCCACTCAAGTTGGT---AACACTATTTCAAAATCCCACACGAGTTGGTAACAACCTTTT
1 AAAGT-CCACACAAGTTGGTGGCAAC-CT-TTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTT
* * *
150851 CCAAGG-CCGACACGAGTTGGTGGTAACCTTTTC
63 CAAAGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * * * * * **
150884 AAAAG-CACACACGAGTTGTTGGCACCCTTTACAAAA-ATCCACATGAATTGGTGGCAAGATTTT
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT
* * * ** *
150947 CAAA-GCCCAAACAAGTTTTTGGCAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * ** ** **
150979 AAAAGCCCACAGGAGTTGGTGGCAACCTTTAC-AAAGTTTACACAAGTTTATGGC-ACCATAGTC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACC-TTTTC
*
151042 AAA-GTCCACACGAGTTGG-GTGTAATA-TTTTC
64 AAAGGTCCACACGAGTTGGTG-GCAA-ACTTTTC
* * * * ** * * *
151073 AAAAG-CTGACACGAGTTGCTGG-AAACTTTTTTAAAGTCTATACA--AGTTAGTGGC-ACCATA
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACC-TT
* * ***
151133 GTCAAA-GTACACACGAGTTGGTGGC-AACAAAGTC
61 TTCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* **** * *
151167 AAAGTCCACACGAGTTGGTGGCAACAAAGTC-AAAG-TCCACACGAGTTGGTGGCAACATTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTCA
* * ** * * *
151230 AAAGCCCACATAAGTTGGTAGCAACCTTTAC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * ** * * *
151261 AAA-TGCA-AAAACGAATTGGTCGCAGCTTTTTTTAAAGAC-CATATGAGTTGCTGTCAACCTTT
1 AAAGTCCACACAA-G--TTGGTGGCAACCTTTTCAAAAG-CTCACATGAGTTGGTGGCAACCTTT
* * *
151323 TCAAA-GTCCACATGAGATGGTGGCAACCTTTTC
62 TCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * ** * **
151356 AAAAGTCCAAAAGCCCACAGAAGTTGCAGGCAACCATTTC-ATAGTTTGCACGAGTTGGTGATAA
1 -AAAGTCC---A---CAC--AAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAA
* * * *
151420 CATTTTCAAAAGTCTACGA-GAGTTGGTGGCAACCTTTTC
57 CCTTTTCAAAGGTCCAC-ACGAGTTGGTGGCAAACTTTTC
* * * * * *
151459 AAAAGCCCACACGAGTTGGTGACAACCTTTTC-AAAG-TCCACATAAATTGTTGGCAACCTTTTC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * * *
151522 AAAAG-CTCACACAAGTTGGTGACAACCTTTTC
64 AAAGGTC-CACACGAGTTGGTGGCAAACTTTTC
* * * * * * **
151554 AAAATCC-CATATGAGTTGGTAGCAACATTTTCCAAAGCTCACATAAGTTGGTAACAACCTTTTC
1 AAAGTCCACACA--AGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* *
151618 AAA-GTCCACACAAGTTGTTGGC-AACATTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * ** * * * *
151649 AAAAGTTCACACGAGTTGGTGGCAACCTTTTCAAATCCT-ACACGAGTTGTTGGCAACGTTTTTA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * *
151713 AAAG-CTCACACGAGTTGATGG-TAACTTTTAC
65 AAGGTC-CACACGAGTTGGTGGCAAACTTTT-C
* * * * ** *
151744 AAAATCCCACACGAGTTGGTGGTAACCATTTT-AAAAGCCCACGCGAGTTGGTGGTAACCTTTTC
1 AAAGT-CCACACAAGTTGGTGGCAACC-TTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTC
* * *
151808 AAAGCT-CACACGAGTTTGTGGC--ACTATAGTC
64 AAAGGTCCACACGAGTTGGTGGCAAACT-T-TTC
* * * * *
151839 AAAGTCTACATGAA-TTGGTAGTAACCTTTTCAAAAGC-CTACAT-ATGTTGGTGGTAACCTTTT
1 AAAGTCCACA-CAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGA-GTTGGTGGCAACCTTTT
* * * * *
151901 CAAAAGCCCACACGAGTTGTTGGCAACCATTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * *** *
151934 AAAGTCTACACGAGTTGACAGAAACC-TTTCAAAAG-TCTACA-GAAGTTGGTGGCAACCTTTTC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATG-AGTTGGTGGCAACCTTTTC
* * * **
151996 AAAAGCCCAAACGAGTTGGAAGC-AACTATTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACT-TTTC
* * * *
152028 AATA-TCCACACGAGTTGGTGGCAACCTTTTGAAAAG-TCTACAAGAGTTGGTGGTAACCTTTTC
1 AA-AGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * * * *
152091 AAAAGCCCACACAAGTTAGTGAC-AACTTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * ** * * * *
152123 AAAATTCCGCACGAGTTGGTGGTAACCTTTTTAAAATTTCACACGTGTTGGTAGCAACCATTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * * *
152188 AAGG-CTTACATGAGTTTGTGGTAACCTTTTTA
65 AAGGTC-CACACGAGTTGGTGGCAAAC-TTTTC
* * * * * * * *
152220 AAAGCCCACACGAGTTGGTGGCAACCTTTTC-AAAGCCCACGTGATTTGTTGGCAACCGTTTAAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* *
152284 AAGTCCACACGAGTTGGTGGCAACCTTTTC
66 AGGTCCACACGAGTTGGTGGCAAACTTTTC
* * ** * *
152314 AAAGTTCACACAAGTTTGG-GGCAACATAGTC-ATAG-TCCACATGAGTTGGTGGTAACCTTTTC
1 AAAGTCCACACAAG-TTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * *
152376 AGAAGG-CTACACAAGTTGGTGGCAACCTTTTC
64 A-AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * **
152408 AAAAG-CTTACCCGAA-TTGGTGG-AAACTTTTTTAAAG-TCCACATGAGTTGGTGGCAACCTTT
1 -AAAGTC-CACAC-AAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTT
* * * **
152469 TCAATA--ACCTATACGAGTTGGTGGTAATTTTTTC
62 TCAA-AGGTCC-ACACGAGTTGGTGGCAAACTTTTC
* * * * * *
152503 GAAGTCTACATAAGTTGGTGGCAACCTTTTC-AAAGTCTACACA--AGTTGATTGC--CCTATAG
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACCT-T-T
* * *
152563 TCAAA-GTCCACACGAGTAGGTGGCAACCTTTCC
62 TCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * *
152596 AGAAG-CCTTCATAAGTTGGTGGTAACCTTTTC-AAAGTCTATACA--AGTTGGTGGC-ACCATA
1 A-AAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACC-TT
* ** * *
152656 TTCAAA-GTCCACACAAGTTGAAGGCAAAATTTTTA
61 TTCAAAGGTCCACACGAGTTGGTGGC-AAACTTTTC
* * * * * * * * * *
152691 AAAGCCCGCACGAA-ATGGTGGTAACTTTTTTAAAAGCCCACACGAGTTGGTGGCAGCCTTTTTA
1 AAAGTCCACAC-AAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * * *
152755 AATGCCCACATGACTTGATGGCAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * *
152786 AAAGTCTACACGAGTTGGTGGTAACTTTTTC-AAAGCCTGCAC--GAGTTAGTGGCAACCTTGTC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACCTTTTC
* * * * *
152848 -AATGTCCACACAAGTTTGTGGTAATCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * *
152879 AAAAGTCCATACTCGTTGGGGGCAACCTTTTC-AAAG-TCCACACT-AGTTGATGGCAGCTTTTT
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACA-TGAGTTGGTGGCAACCTTTT
* * * ** *
152941 TAAAAG-CCTACACGAGTTGATGGCAGCCTTTTTA
63 CAAAGGTCC-ACACGAGTTGGTGGCAAAC-TTTTC
* * * * * *
152975 AAAG-CCTACACGAGTTGATGGCAGCCTTTTTAAAAGC-CTACACGAGTTGATGGCAACCTTTTC
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * * *
153038 AAA-ATCCGCACGAGTTGGTGGCAACCTTTTT
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * * *
153069 ATAG-CCAACACGAGTTGGTAGCAACATTTT-TAAAG-TATACACGAGTTGGTGGCAACCATTTC
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* * * * *
153131 AAAAGTCCACACTAGTTGGAGGCAACCATTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * ** **
153163 AAAGTTCACACGAGTTGGT-GCTAACCTTTTCAAATGCTCATACGAGCAGGTGGCAATATTTTCA
1 AAAGTCCACACAAGTTGGTGGC-AACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
153227 AA-GTCTATACAAGTTGGTGGC--CCTATAGTC
65 AAGGTCCACACGAGTTGGTGGCAAACT-T-TTC
* * *** *
153257 AAAGTCCACACGCA-TTGGTGGTATTATTTTCGAAAGC-CTACATGAGTTGGTGGCAACCTTTTC
1 AAAGTCCACAC-AAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * * ****
153320 AAAAGCCCATACGAGTTGGTGGTTGCCCTTTT-
64 AAAGGTCCACACGAGTTGGTGG-CAAACTTTTC
** * * *
153352 AAAAACCTACACGAGTTGATGGCAACCTTTTC-AAAG-TC-CATAGGAGTTGGTGGTAACCTTTT
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACAT--GAGTTGGTGGCAACCTTTT
* * *
153414 CAAA-G-CACATACGAGTTAGTGGCAACCTTTTC
63 CAAAGGTC-CACACGAGTTGGTGGCAAACTTTTC
** * * * * ** *
153446 AAAGTCCACATGAGTTGGTGGCAATC-TTTCAAAAGCCCACACGAGTTGTTGGCTGCCTTTTTAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACC-TTTTCA
* * * *
153510 AAGG-CCACACAAGTTGATAGCAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * *
153540 AAATTCCACACAAGTTAAG-GGTAACTTTTTC-AAAGC-CCCTATGAGTTAGTGGCAAACTTTTC
1 AAAGTCCACACAAGTT-GGTGGCAACCTTTTCAAAAGCTCAC-ATGAGTTGGTGGCAACCTTTTC
* * * *
153602 AAA-GTCCACATGAGCTGCTGGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * *
153633 AAAAG-CACAAACTAA-TTGGTGGCAACCCTTTC-AATG-TCCACACT-AGTTGGTGGCAACCAT
1 -AAAGTC-CACAC-AAGTTGGTGGCAACCTTTTCAAAAGCT-CACA-TGAGTTGGTGGCAACCTT
* *
153693 TTCAAA-GTCCACACGAGTTGATGGC-AACCTTTC
61 TTCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * *
153726 AAAAG-CCTA-AAAGAGTTGGTGGTAACCTTTTCAAAAGCCCAAATGCCCACACGAGTTGGTGAC
1 -AAAGTCC-ACACA-AGTTGGTGGCAACCTTTTCAAAAG--C---T---CACATGAGTTGGTGGC
*
153789 AACCATTTT-AAA-GTCTACACGAGTTGGTGGC-AACTTTTTC
55 AACC-TTTTCAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* ** * ** * *
153829 AAAAGTCTACA-AGAGTTATTGGCAACCTTTTC-GAAG-TCCACACAAGTTGTTGGCAACTTTTT
1 -AAAGTCCACACA-AGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT
* * * * * *
153891 CAAAAGCCCACACGAATTGGTGGTAACATTTTTG
63 CAAAGGTCCACACGAGTTGGTGGCAA-ACTTTTC
*** * * * * *
153925 AAA-TCCTACATGCGTTGGTGGCAAACTTTTCAAAATCTCACACGAGTTGGTGACAACCATTTCA
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
153989 AA-GTCCACTCAAGCTGTTGGCAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * * * * * *
154019 AAAAACCCACACGAGTTGCTAGCAACATTTTCAAAATCCCACACGAGTTGCTGGCAACC-TTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
154083 AA-ATCCCCCACGAGTTGGTGGTAAGCTTTAC
65 AAGGT-CCACACGAGTTGGTGGCAAACTTTTC
* * * * *
154114 AAATGTCCACACGAGTTGGTGGCAACCTTTT-GAAAGCCCAAATGAGTTGTTGGCAACCTTTTCA
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
154178 AAAGCCCATAGGAGTTGGTGGCAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * *
154209 AAAAATCCACA-GAGTTGGTGGCAACCTTTTCAAAA-ATCCACATGAATTGGTGGTAACCATTTC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC
* ** * **
154272 AAA-GTCCACATGAGTTAATAGC-AACCGTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * *
154302 AAAAGTCCATA-AGAGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACAT-ATGTAGGTGG-
1 -AAAGTCCACACA-AGTTGGTGGCAACCTTTT--------CAAAAGCTCACATGA-GTTGGTGGC
* *** * * *
154364 ATACCTTTTCAAAAGTCTGTAAGAGTTGGTGGCAACCTCTTC
55 A-ACCTTTTCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * *
154406 AAAAGCCCACACGAGTTGGTGACAACTTTTTC-AAAG-TCCACA-GAAGTTGTTGGCAACCTTTT
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATG-AGTTGGTGGCAACCTTTT
* * * * *
154468 CAAAAGCCCACATGTGTTGGTGGCAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * * * ** * *
154501 AAAATCTCGCACGAGTTCGTGGTAACCTTTTTAAAATC-CACACAAGTTGGTAGCAACC-TTTCG
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* ** ** * * *
154564 AAGGCCCACATAAGTTAATGGTAACCATTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * ** * * * * * * *
154595 AAAAAACCAAATGAGTTGGTAGTAAACTTTTCAAAAAAC-CACACGAGTTGGTGGTAACCTATTC
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTC-AAAAGCTCACATGAGTTGGTGGCAACCTTTTC
** * * * *
154659 AAAAATCCACACGAATTTGTGGCAACCATTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
** ** ** * ** *
154691 AAAGTCCACATGAGTTAATGGCAGTC-TTTCAAAAG-TCCACAAGAGTTATTGGCAATCTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTC-
* * * *
154754 AAAGCTCAAAAGCCCAAACGAGTTGGTAGCAACCTTTTC
64 AAAG-------GTCCACACGAGTTGGTGGCAAACTTTTC
* * * * *
154793 AAAAG-CCTA-GCGAGTTGGTGGTAACCTTTTC-AAAG-TCTACACGAGTTGGTGGCAA-GTTTT
1 -AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTT
* * * * **
154853 CCAAA-GTCTATACAAGTTGGTGGC-ACCATAGTC
63 -CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* ** * * * * *
154886 AAAGTCCAAATGAGTTAGG-GGCAACATTTTTAGAAGCCCACAAGAGTTGGTGGCAACCTTTTCA
1 AAAGTCCACACAAGTT-GGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * **
154950 AA-GTCTAATACAAGTTGGTGGC-ACCATAGTC
65 AAGGTC-CACACGAGTTGGTGGCAAAC-TTTTC
* ** * * * * *
154981 AAAGTCCCCACGTGTTGGTGGCAACATTTTCAAAAGC-CTACATGAATTGGCGACAAACTTTTC-
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTCA
* *
155044 AATGTCCACAAGAGTTGGTGGC-AAC----C
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * ** * * *
155070 ----T----ACAAGTTGGTGGTAACCTTTTC-AAAGCGCACAAAAGTTGATGG-TACCATAGTT-
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACC-T-TTTC
* * * *
155124 AAA-GTTCACACGAGTTGGTGGCAACCTATTA
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * ** * * * *
155155 AAAGCCCACATGAGTTTGTGGTAAATTTTTC-AAAG-TACACGTAAGTTGTTGGCAATCTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCTTTTCA
* * * **
155218 AA-GTCCACACAAGTTGGCGGC-ACCATAGTC
65 AAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * * * * * * * *
155248 GAAGTCCACACGAGTTAGTGGTAACCTTCTC-AAAGCCCATACGAGTTGATGGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * * *
155312 A-ATCCCACACGAGTTGGTGACAACCTTTTT
66 AGGT-CCACACGAGTTGGTGGCAAACTTTTC
* * * * *
155342 AGAGTCCACACAAGTTGTTGGCAACCTTTTCAAAAGCTCATACGAGTTGGTGGCAATCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * *
155407 A-ATCCCACATGAGTTGGTGGCAACCTTTTC
66 AGGT-CCACACGAGTTGGTGGCAAACTTTTC
* * * * *
155437 AAAATCCCACACGAGTTGGTAGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAA-CTTCTGT
1 AAAGT-CCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTT-T-T
* * * * *
155501 -AAAAGTCCATACGAGTTGGTCGTAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * ** * * * * *
155533 AAA-ACCTAAACGAGATATTGGCAACCTTTTTAAAAGC-CTATAGGAATTGGCGGCAACCTTTTC
1 AAAGTCC-ACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTC
* * * * *
155596 AAAAGCCCACACGAATTGGTGGTAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* ** * * * * *
155628 AAAGCCCACTTAATTTGGTGGCAACCGTTTCAAAAGC-CTA-ACGTGTTGGTGGTAACCTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTTCA
* * *
155691 AA-GTCTACACGAGTTGGT-ACAATA-TTTTAA
65 AAGGTCCACACGAGTTGGTGGCAA-ACTTTT-C
* * * * *
155721 AAAGCCCACACAAGTTGGTGGCAAACTTTTCAAAATC-CACACGAATTGGTGGCAA-C---T---
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
* * *
155778 ---T----ACGAGTTAGTGGCAACCTTTTT
66 AGGTCCACACGAGTTGGTGGCAAACTTTTC
** * *
155801 AAAGTCCACATGAGTTGGTGGC-A-CTATTGTC-AAAG-TCCACACGAGTTGGTGGCAACTTTTT
1 AAAGTCCACACAAGTTGGTGGCAACCT-TT-TCAAAAGCT-CACATGAGTTGGTGGCAACCTTTT
* * * *
155862 CAAA-----ACACAAGTTAGTGGTAACCTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
** * * * * * **
155890 AAAGTCCACATGAGTTGGTGGCAATCTTTT-TAAAG-TC-CATACGTGTTGCTGGC-TCCATAGT
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACAT--GAGTTGGTGGCAACC-TTTT
* *
155951 CAAA-GTCCACACGAGTTAGTGGC-AGCTTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * *** * *
155983 AAAAGCCCGCACGAA-TTGGTAAAAACCTTTTC-AAAG-TCTACACGAGTTGGTGGCAAGC-TTT
1 -AAAGTCCACAC-AAGTTGGTGGCAACCTTTTCAAAAGCTC-ACATGAGTTGGTGGCAACCTTTT
* * * * * * **
156044 CCAATGTCTATACCAGTTGGTGGC-ACCATAGTC
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* * ** * * * * *
156077 AATGTCCAAAGGAGTTTGGGGGCAACCTTTTCAGAAGCCCACATGAGTTGCTGGCAACGTTTTCA
1 AAAGTCCACACAAG-TTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
156142 AA-ATCCCAAATGCGTTGGTGGAAAACTTTTC
65 AAGGT-CCACACGAGTTGGTGGCAAACTTTTC
* * * * * * *
156173 AAAATCCCACACGAGTTGGTGACAACCATTTC-AAAGCCTATACA--AGCTGTTGGCAACCTTTT
1 AAAGT-CCACACAAGTTGGTGGCAACCTTTTCAAAAG-CT-CACATGAGTTGGTGGCAACCTTTT
* * * *
156235 CAAAAGCCCATACGAGTTGGTGGCAACCTTTTTC
63 CAAAGGTCCACACGAGTTGGTGGCAAAC-TTTTC
* ** * * ** * * * *
156269 AAAATCCCACACGTGTTGGTGGCAACC-TTTCAAAATCCCACACAAGTTAGTAGCAACATTTTTA
1 AAAGT-CCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * * * *
156333 AAAG-CCTACACGAGTTAGTGGTAAGCTTTGC
65 AAGGTCC-ACACGAGTTGGTGGCAAACTTTTC
** ** * * *
156364 AAATGTCCACATGAGTTGGTGGCAA-CTTTTTGAAAGCTCAAACT-TGTTGTTGGCAACCTTTTC
1 AAA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACA-TGAGTTGGTGGCAACCTTTTC
*** * * *
156427 AAAAACCCATAAGAGTTGGTGGCAACCTTTTC
64 AAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * * *
156459 AAAAAG-CCACACGAGTTGGTGGCAATCTTTTCAAAA-ATCCACATGAATTGGTGGTAA-TTATT
1 --AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCT-CACATGAGTTGGTGGCAACCT-TT
** ** **
156521 TCAAA-GTCCACTTGAGTTAATGGC-AACCATTC
62 TCAAAGGTCCACACGAGTTGGTGGCAAACTTTTC
* * * * ** *
156553 AAAAGTCTATA-AGAGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACACAAGTAGGTGGCA
1 -AAAGTCCACACA-AGTTGGTGGCAACCTTTT--------CAAAAGCTCACATGAGTTGGTGGCA
* * *
156617 ACCATTTCAAA-GTCCACACAAGTTGGTGG-ATACCTTTTC
56 ACCTTTTCAAAGGTCCACACGAGTTGGTGGCA-AACTTTTC
**** * * * * *
156656 AAAAGTTTGTAAAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGATGACAACCTTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCA
* * *
156721 AA-GTCCACACAAGTTGTTGGCAACCTTTTC
65 AAGGTCCACACGAGTTGGTGGCAAACTTTTC
* **
156751 AAATGCCCACACGTGTTGGTGGCAAC
1 AAA-GTCCACACAAGTTGGTGGCAAC
156777 TGTCGTAACG
Statistics
Matches: 14257, Mismatches: 3901, Indels: 2700
0.68 0.19 0.13
Matches are distributed among these distances:
78 2 0.00
79 28 0.00
80 80 0.01
81 33 0.00
82 5 0.00
83 4 0.00
84 10 0.00
85 8 0.00
87 55 0.00
88 30 0.00
89 100 0.01
90 31 0.00
91 108 0.01
92 129 0.01
93 934 0.07
94 3084 0.22
95 5452 0.38
96 2274 0.16
97 229 0.02
98 35 0.00
99 17 0.00
100 7 0.00
101 69 0.00
102 586 0.04
103 602 0.04
104 158 0.01
105 14 0.00
106 22 0.00
107 33 0.00
108 48 0.00
109 13 0.00
110 20 0.00
111 7 0.00
112 3 0.00
113 12 0.00
114 6 0.00
115 8 0.00
116 1 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (95 bp):
AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCTCACATGAGTTGGTGGCAACCTTTTCAA
AGGTCCACACGAGTTGGTGGCAAACTTTTC
Found at i:141558 original size:15 final size:15
Alignment explanation
Indices: 141538--141570 Score: 66
Period size: 15 Copynumber: 2.2 Consensus size: 15
141528 TTTGTGGCAC
141538 CATAGTCAAAGCCCA
1 CATAGTCAAAGCCCA
141553 CATAGTCAAAGCCCA
1 CATAGTCAAAGCCCA
141568 CAT
1 CAT
141571 GAGTTGGTGG
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 18 1.00
ACGTcount: A:0.39, C:0.33, G:0.12, T:0.15
Consensus pattern (15 bp):
CATAGTCAAAGCCCA
Found at i:141662 original size:31 final size:31
Alignment explanation
Indices: 141565--141670 Score: 99
Period size: 31 Copynumber: 3.4 Consensus size: 31
141555 TAGTCAAAGC
* *
141565 CCACATGAGTTGGTGGCAACCTTTTCAAAAAT
1 CCACACGAGTTGATGGCAACC-TTTCAAAAAT
* * * *
141597 CCACACAAGTT-ATTGGGAACTATTTC-AAAGT
1 CCACACGAGTTGA-TGGCAAC-CTTTCAAAAAT
*
141628 CCACACGAGTTGATGGCAACCTTTCAAAATT
1 CCACACGAGTTGATGGCAACCTTTCAAAAAT
*
141659 CCACAAGAGTTG
1 CCACACGAGTTG
141671 GTGGTAACTA
Statistics
Matches: 59, Mismatches: 11, Indels: 9
0.75 0.14 0.11
Matches are distributed among these distances:
30 4 0.07
31 35 0.59
32 20 0.34
ACGTcount: A:0.33, C:0.23, G:0.18, T:0.26
Consensus pattern (31 bp):
CCACACGAGTTGATGGCAACCTTTCAAAAAT
Found at i:142767 original size:159 final size:158
Alignment explanation
Indices: 142464--142895 Score: 405
Period size: 159 Copynumber: 2.7 Consensus size: 158
142454 TTCAAAGTGC
* * * * * * * * *
142464 ACACAAGTTGTTGGCAACATTTTCAAAAGTTCACACGAGTTGGTGGTAACCTTTTCAAAGCCTAC
1 ACACGAGTTGTTAGAAACCTTTTAAAAAGTCCACACGAGTTGGTGGTAACCTTTTAAAAACCCAC
* * * * *
142529 ACGAGTTGTTGGCAACATTTTTAAAAGCTCACACGAGTTGATGGTAACTTTTACAAAAACCCACA
66 ACGAGTTGGTAGCAACCTTTTCAAAAGCTCACACAAGTTGATGGTAACTTTTACAAAAACCCACA
* *
142594 CGAGTTAGTGGCAACCTTTTGAAAAGCC-
131 CAAGTTAGTAGCAACCTTTT-AAAAGCCT
* * * * * *
142622 ACACGAGTTAG-T-GATAACTTTTTCAAAA-TCCGGCATGAGTTGGGGGTAACCTTTTGAAAATC
1 ACACGAGTT-GTTAGA-AACCTTTTAAAAAGTCC-ACACGAGTTGGTGGTAACCTTTT-AAAAAC
* *
142684 CCACACGTGTTGGTAGCAACCTTTTCAAAGGC-CTACACAAGTTTG-TGGTAACTTATT-CAAAA
62 CCACACGAGTTGGTAGCAACCTTTTCAAAAGCTC-ACACAAG-TTGATGGTAACTT-TTACAAAA
** *
142746 GTCCACACAAGTT-GCTAGCAACCTTTTCAAAGCCT
124 ACCCACACAAGTTAG-TAGCAACCTTTTAAAAGCCT
** *
142781 ATGCGAGTTGTTAGAAACCTTTTAAAAAGTCCACACGAGTTGGTGGTAACTTTTTCAAAAACCCA
1 ACACGAGTTGTTAGAAACCTTTTAAAAAGTCCACACGAGTTGGTGGTAACCTTTT-AAAAACCCA
** *
142846 CACGAGTTGGTAGCAACCTTTTCAAAA-CTCTACATGAGTTGGTGGTAACT
65 CACGAGTTGGTAGCAACCTTTTCAAAAGCTC-ACACAAGTTGATGGTAACT
142896 ATTTTAAAGT
Statistics
Matches: 224, Mismatches: 36, Indels: 27
0.78 0.13 0.09
Matches are distributed among these distances:
157 3 0.01
158 54 0.24
159 157 0.70
160 10 0.04
ACGTcount: A:0.31, C:0.21, G:0.19, T:0.29
Consensus pattern (158 bp):
ACACGAGTTGTTAGAAACCTTTTAAAAAGTCCACACGAGTTGGTGGTAACCTTTTAAAAACCCAC
ACGAGTTGGTAGCAACCTTTTCAAAAGCTCACACAAGTTGATGGTAACTTTTACAAAAACCCACA
CAAGTTAGTAGCAACCTTTTAAAAGCCT
Found at i:145508 original size:159 final size:158
Alignment explanation
Indices: 145132--145653 Score: 387
Period size: 159 Copynumber: 3.3 Consensus size: 158
145122 GAGTTGGTAA
* * * * * ** *
145132 CAACCTTTTCAA-AGTCTACACAAGTTGTTGGCAACCTTTTGAGAAGCCCACATGAGTTGGTGAC
1 CAACCTTTTCAATAGTCCACACAAGTTGGTGGCAACCTTTTCA-AAGCCGATAAAAGTTGGTGCC
* * * * * *
145196 AACTTTGTCAAAATCCCACACGAGTTGGTGGTAACCTTTTCAAAATCCCACACGTA-TTGGTAGC
65 ACCATAGT-AAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACG-AGTTGGTAGC
* * * * * *
145260 TACTTTTTCAAAGGCCTACACGAGCTTGTGG
128 AACCTTTTAAAAAGCCTACACCAGCTTGTAG
* * * *** *
145291 TAACCTTTTCAATAGTCCGCACAAGTTGGTGGCAATCTTTTCAAAGCCGATGCGAGTTGTTAGCC
1 CAACCTTTTCAATAGTCCACACAAGTTGGTGGCAACCTTTTCAAAGCCGATAAAAGTTGGT-GCC
** *
145356 ACC-TTTTAAAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTGGCA
65 ACCATAGT-AAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTAGCA
* * *
145420 ACCTTTTAAAAATCTTATACCAG-TTGGTAG
129 ACCTTTTAAAAAGCCTACACCAGCTT-GTAG
* * * * *
145450 CAACCTTTTTAGA-AGGT-CACACTAGTTGGTGGCAACCTTTTCAAAGTCTATAAAAGTTGGTGG
1 CAACCTTTTCA-ATA-GTCCACACAAGTTGGTGGCAACCTTTTCAAAGCCGATAAAAGTTGGTGC
* * * * * * * *
145513 CACCATAGTCAAAGTCCACACGAGTTAGTGGCAACATTTTCAAAAGCCCACATGAGTTGATAGGA
64 CACCATAGTAAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTAGCA
* * * *
145578 A-TTATTTCAAAAGCCCACACGAG-TTGGTAG
129 ACCT-TTTAAAAAGCCTACACCAGCTT-GTAG
* * ** *
145608 CAGCCTTATTTAA-AGTCCACACGCGTTGATGGCAACCTTTTCAAAG
1 CAACCTT-TTCAATAGTCCACACAAGTTGGTGGCAACCTTTTCAAAG
145654 TCCACATGTG
Statistics
Matches: 291, Mismatches: 62, Indels: 21
0.78 0.17 0.06
Matches are distributed among these distances:
157 3 0.01
158 110 0.38
159 146 0.50
160 32 0.11
ACGTcount: A:0.30, C:0.23, G:0.20, T:0.28
Consensus pattern (158 bp):
CAACCTTTTCAATAGTCCACACAAGTTGGTGGCAACCTTTTCAAAGCCGATAAAAGTTGGTGCCA
CCATAGTAAAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTAGCAAC
CTTTTAAAAAGCCTACACCAGCTTGTAG
Found at i:145671 original size:158 final size:158
Alignment explanation
Indices: 145365--145674 Score: 349
Period size: 158 Copynumber: 2.0 Consensus size: 158
145355 CACCTTTTAA
* * *
145365 AAAGCCCACACGAGTTAGTGGTAACCTTTTCAAAAACCCACACGAGTTGGTGGCAACCTTTTAAA
1 AAAGCCCACACGAGTTAGTGGCAACATTTTCAAAAACCCACACGAGTTGATGGCAACCTTTTAAA
* ** * * *
145430 AATCTTATACCAGTTGGTAGCAACCTTTTTAGAAGGTCACACTAGTTGGTGGCAACCTTTTCAAA
66 AAGCCCACACCAGTTGGTAGCAACCTTTTTAGAAGGTCACACGAGTTGATGGCAACCTTTTCAAA
* * *
145495 GTCTATAAAAGTTGGTGGCACCATAGTC
131 GTCCACAAAAGTTAGTGGCACCATAGTC
* * * * *
145523 AAAGTCCACACGAGTTAGTGGCAACATTTTCAAAAGCCCACATGAGTTGATAGG-AA-TTATTTC
1 AAAGCCCACACGAGTTAGTGGCAACATTTTCAAAAACCCACACGAGTTGAT-GGCAACCT-TTTA
* * *
145586 AAAAGCCCACACGAGTTGGTAGCAGCCTTATTTA-AA-GTCCACACGCGTTGATGGCAACCTTTT
64 AAAAGCCCACACCAGTTGGTAGCAACCTT-TTTAGAAGGT-CACACGAGTTGATGGCAACCTTTT
***
145649 CAAAGTCCACATGTGTTAGTGGCACC
127 CAAAGTCCACAAAAGTTAGTGGCACC
145675 CTTTCAAAAG
Statistics
Matches: 125, Mismatches: 23, Indels: 8
0.80 0.15 0.05
Matches are distributed among these distances:
157 3 0.02
158 116 0.93
159 6 0.05
ACGTcount: A:0.31, C:0.22, G:0.20, T:0.27
Consensus pattern (158 bp):
AAAGCCCACACGAGTTAGTGGCAACATTTTCAAAAACCCACACGAGTTGATGGCAACCTTTTAAA
AAGCCCACACCAGTTGGTAGCAACCTTTTTAGAAGGTCACACGAGTTGATGGCAACCTTTTCAAA
GTCCACAAAAGTTAGTGGCACCATAGTC
Found at i:145682 original size:30 final size:31
Alignment explanation
Indices: 145619--145682 Score: 78
Period size: 31 Copynumber: 2.1 Consensus size: 31
145609 AGCCTTATTT
*
145619 AAAGTCCACACGCGTTGATGGCAACCTTTTC
1 AAAGTCCACACGCGTTGATGGCAACCCTTTC
* *
145650 AAAGTCCACATGTGTT-AGTGGC-ACCCTTTC
1 AAAGTCCACACGCGTTGA-TGGCAACCCTTTC
145680 AAA
1 AAA
145683 AGCCTAAAAG
Statistics
Matches: 29, Mismatches: 3, Indels: 3
0.83 0.09 0.09
Matches are distributed among these distances:
30 11 0.38
31 18 0.62
ACGTcount: A:0.28, C:0.27, G:0.19, T:0.27
Consensus pattern (31 bp):
AAAGTCCACACGCGTTGATGGCAACCCTTTC
Found at i:145958 original size:62 final size:63
Alignment explanation
Indices: 145795--146041 Score: 230
Period size: 62 Copynumber: 3.9 Consensus size: 63
145785 AAGTCAATAT
* * * * * * *
145795 AAGTTGTTGGCAACCTTTTCAAAATCCCACACTAGTTGGTGGCAACCTTTTCAAAATCGCACAT
1 AAGTTATTGGAAACCTTTTCAAAAGCCTACACAAGTTGGTGACAACCTTTTCAAAATC-CACAA
* * * * * * * * *
145859 GAGTTACTAGCAATCTTTTCAAAAACC--CACAGTGTTGGTGACAACCTTTTCAAAGTCCACAC
1 AAGTTATTGGAAACCTTTTCAAAAGCCTACACA-AGTTGGTGACAACCTTTTCAAAATCCACAA
* * ** *
145921 AAGTTATTGGAAACTTTTTCAAAAGCC-ATACGGGTTGGTGAAAACCTTTTCAAAATCCACAA
1 AAGTTATTGGAAACCTTTTCAAAAGCCTACACAAGTTGGTGACAACCTTTTCAAAATCCACAA
* * * *
145983 AAGTTGTTGGCAACCTTTTCAAAAGCCTACACAAGTTGGTGGCAACCTTTTTAAAATCC
1 AAGTTATTGGAAACCTTTTCAAAAGCCTACACAAGTTGGTGACAACCTTTTCAAAATCC
146042 CACTCGAGTT
Statistics
Matches: 147, Mismatches: 33, Indels: 7
0.79 0.18 0.04
Matches are distributed among these distances:
62 77 0.52
63 49 0.33
64 21 0.14
ACGTcount: A:0.32, C:0.23, G:0.16, T:0.29
Consensus pattern (63 bp):
AAGTTATTGGAAACCTTTTCAAAAGCCTACACAAGTTGGTGACAACCTTTTCAAAATCCACAA
Found at i:146460 original size:94 final size:93
Alignment explanation
Indices: 146223--146460 Score: 230
Period size: 94 Copynumber: 2.5 Consensus size: 93
146213 GGCAACTTTT
* * * *
146223 TCAAAAGTCCACACGAGTTGGTGGCAACCTTTACAAAGTTCACACGAGTTTATGGCACCATAGTC
1 TCAAAAGTCCACACGAGTTGGTGGCAACATTTTCAAAGTCCACACAAG-TTATGGCACCATAGTC
* * * * ***
146288 AAAGTCCACACGAGTTGGGTGTAATATTT
65 AAAGTACACACGAATTGGGTGCAACAAAG
* * * * * *
146317 TCAAAAG-CCGGCACGAGTTGCTGGTAACATTTTTAAAGTCTATACAAGTTAGTGGCACCATAGT
1 TCAAAAGTCC-ACACGAGTTGGTGGCAACATTTTCAAAGTCCACACAAGTTA-TGGCACCATAGT
*
146381 CATAGTACACACGAATT-GGTGGCAACAAAG
64 CAAAGTACACACGAATTGGGT-GCAACAAAG
* *
146411 TC-AAAGTCCACACGAGTTGGTGGCAACATTTTCAAAAGCCCACATAAGTT
1 TCAAAAGTCCACACGAGTTGGTGGCAACATTTTC-AAAGTCCACACAAGTT
146461 GGTAGCAACC
Statistics
Matches: 113, Mismatches: 26, Indels: 10
0.76 0.17 0.07
Matches are distributed among these distances:
93 32 0.28
94 81 0.72
ACGTcount: A:0.33, C:0.21, G:0.21, T:0.25
Consensus pattern (93 bp):
TCAAAAGTCCACACGAGTTGGTGGCAACATTTTCAAAGTCCACACAAGTTATGGCACCATAGTCA
AAGTACACACGAATTGGGTGCAACAAAG
Found at i:147493 original size:159 final size:158
Alignment explanation
Indices: 147259--147713 Score: 402
Period size: 159 Copynumber: 2.9 Consensus size: 158
147249 TGGTGGTAAC
* * ** *
147259 CCTTTTCAAAGGCC-ACACGAGTTGGTAACAACCTTTTC-AAAGTCTACACAAGTTTTTGGCAAC
1 CCTTTTCAAAGGCCTACACGAGTTGGTAGCAACCTTTTCAAAAGTCCACACAAGTTGGTGGTAA-
* * * **
147322 CTTTTGAGAAGCCCACATGAGTTGGTGA-C-ACCTTTGTCAAAATCCTGCACGAGTTGGT-AGTA
65 CTTTTCA-AAGCCCACATGAGTT-GTGAGCAACCTTT-TAAAAAGCCCACACGAGTTGGTGA-TA
* * *
147384 ACCTTTTCAAAATCCCACAC-ATATTGGTAGCTA
126 ACCTTTTCAAAAACCCACACGA-ATTGGGAGCAA
* * * *
147417 CCTTTTCAAAGGCCTACACGAGTTTGTGGTAACCTTTTCAAAAGTCCGCACAAGTTGGTGGTAAT
1 CCTTTTCAAAGGCCTACACGAGTTGGTAGCAACCTTTTCAAAAGTCCACACAAGTTGGTGGTAA-
** * *
147482 CTTTTCAAAGCCCATGTGAGTTGTTAGCAATCTTTTAAAAAGCCCACACGAGTTGGTGATAACCT
65 CTTTTCAAAGCCCACATGAGTTGTGAGCAACCTTTTAAAAAGCCCACACGAGTTGGTGATAACCT
* * *
147547 TTTTAAAAACCCACACGAGTTGGGGGCAA
130 TTTCAAAAACCCACACGAATTGGGAGCAA
** * * * * *
147576 CCTTTTCAAAATCCTATACGAGTTGGTAGCAACCTTTTCAAAGGCCCATACGAGTTGGTGGTAAC
1 CCTTTTCAAAGGCCTACACGAGTTGGTAGCAACCTTTTCAAAAGTCCACACAAGTTGGTGGTAAC
*** * * * * * * *
147641 ATTTTCAAAAATTCGCACGAGTTTGTG-GCAACCTTTTTAAATGCCCACATGAGTTTGTGGTAAC
66 -TTTTC-AAAGCCCACATGAG-TTGTGAGCAACCTTTTAAAAAGCCCACACGAGTTGGTGATAAC
147705 CTTTTCAAA
128 CTTTTCAAA
147714 GTTCACAGGA
Statistics
Matches: 237, Mismatches: 51, Indels: 16
0.78 0.17 0.05
Matches are distributed among these distances:
158 18 0.08
159 137 0.58
160 78 0.33
161 4 0.02
ACGTcount: A:0.29, C:0.22, G:0.19, T:0.30
Consensus pattern (158 bp):
CCTTTTCAAAGGCCTACACGAGTTGGTAGCAACCTTTTCAAAAGTCCACACAAGTTGGTGGTAAC
TTTTCAAAGCCCACATGAGTTGTGAGCAACCTTTTAAAAAGCCCACACGAGTTGGTGATAACCTT
TTCAAAAACCCACACGAATTGGGAGCAA
Found at i:148682 original size:94 final size:93
Alignment explanation
Indices: 148520--148693 Score: 224
Period size: 94 Copynumber: 1.8 Consensus size: 93
148510 ATTGGAAACT
* * * *
148520 TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTACAAAGTTCAAATGAGGTTGTGGCACCACA
1 TTTTCAAAAGCCCACACGAGTTGCTAGCAACCTTTACAAAGTT-AAATGAAGTTGCGGCACCACA
*
148585 GTCAAAGTCTACACGAGTTGGGTGTAATA
65 GTCAAAGTCCACACGAGTTGGGTGTAATA
* ** * *
148614 TTTTCAAAAGCCCACACGAGTTGCTAGTAACCTTTTTAAAGTT-TATGCAAGTTGGCGGCACCAT
1 TTTTCAAAAGCCCACACGAGTTGCTAGCAACCTTTACAAAGTTAAATG-AAGTT-GCGGCACCAC
148678 AGTCAAAGTCCACACG
64 AGTCAAAGTCCACACG
148694 GATTGGTGGC
Statistics
Matches: 68, Mismatches: 10, Indels: 4
0.83 0.12 0.05
Matches are distributed among these distances:
92 3 0.04
93 4 0.06
94 61 0.90
ACGTcount: A:0.30, C:0.22, G:0.21, T:0.26
Consensus pattern (93 bp):
TTTTCAAAAGCCCACACGAGTTGCTAGCAACCTTTACAAAGTTAAATGAAGTTGCGGCACCACAG
TCAAAGTCCACACGAGTTGGGTGTAATA
Found at i:150271 original size:79 final size:79
Alignment explanation
Indices: 150135--150280 Score: 195
Period size: 79 Copynumber: 1.8 Consensus size: 79
150125 ACTATTTTAA
* ** **
150135 AAGCCCACATGAGTTGGTGGTAACCTTTTCAAAGTTCACACGAGTTTTTAGCACCATAGTCAAAG
1 AAGCCCACATGAGTTGGTGGCAACCTTTTCAAAGTTCACAAAAGTTGGTAGCACCATAGTCAAAG
150200 TCTAACATTTTCAG
66 TCTAACATTTTCAG
* * * *
150214 AAGCTCACATTAGTTGGTGGCAACCTTTTCAAAG-TCTATAAAAGTTGGTGGCACCATAGTCAAA
1 AAGCCCACATGAGTTGGTGGCAACCTTTTCAAAGTTC-ACAAAAGTTGGTAGCACCATAGTCAAA
150278 GTC
65 GTC
150281 CACACGAGTT
Statistics
Matches: 57, Mismatches: 9, Indels: 2
0.84 0.13 0.03
Matches are distributed among these distances:
78 2 0.04
79 55 0.96
ACGTcount: A:0.31, C:0.21, G:0.19, T:0.29
Consensus pattern (79 bp):
AAGCCCACATGAGTTGGTGGCAACCTTTTCAAAGTTCACAAAAGTTGGTAGCACCATAGTCAAAG
TCTAACATTTTCAG
Found at i:150426 original size:31 final size:30
Alignment explanation
Indices: 150225--156776 Score: 1692
Period size: 32 Copynumber: 207.4 Consensus size: 30
150215 AGCTCACATT
* * *
150225 AGTTGGTGGCAACCTTTTCAAAGTCTATAAA
1 AGTTGGTGGCAACCTTTTCAAAGTCCA-CAC
**
150256 AGTTGGTGGC-ACCATAGTCAAAGTCCACAC
1 AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* * * * *
150286 GAGTTCGTGGTAACATTTTCAAATGCCCACATG
1 -AGTTGGTGGCAACCTTTTCAAA-GTCCACA-C
* * * * *
150319 AGTTGATGGGAACCATTTCAAAAGCCCACGC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * * *
150350 GAGTTGGTAGCAGCCTTATCTAAAGCCCACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * *
150382 -GCATTGATTGCAACATTTTCAAAGTCCACAC
1 AG--TTGGTGGCAACCTTTTCAAAGTCCACAC
*
150413 ATGTTGGTGGCAACCTTTTCAAAAGCCCAAAAATCCATAC
1 A-GTTGGTGGCAACCTTTTC-AAAG--------TCCACAC
* * ** *
150453 GAATTGGTGGTAACCTTTTCAAAAGTCTGCGAG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCAC-AC
* *
150486 AGTTGGTGGCAACCTTTTCAAAAGTCTACGC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *** * * *
150517 GAGTTAGTAATAACCTTTTCGAAGTCAACATA
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* * *
150549 AGTTGTTGGCAACATTTTCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *
150580 GAGTTGGTGGCAACCTTTTCAAAATCGCACATG
1 -AGTTGGTGGCAACCTTTTCAAAGTC-CACA-C
* *** *
150613 AGTTGGTGGCAATCTTTT-AAAAAACATAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
*
150642 AGTGTTGGTGACAACCTTTTCAAAGTCCACAC
1 A--GTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * * *
150674 AAGTTGTTGGAAACTTTTTCAAATGCCCAGAC
1 -AGTTGGTGGCAACCTTTTCAAA-GTCCACAC
* ** *
150706 GGGTTGGTAACAACCTTTTCAAAATCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
150737 AAGTTGTTGGCAACCTTTTCAAAAGCCCAAAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *
150769 GAGTTAGTGGCAACCCTTTT-AAAGTCCCACTC
1 -AGTTGGTGGCAA-CCTTTTCAAAGT-CCACAC
*
150801 AAGTTGGT---AACACTATTTCAAAATCCCACAC
1 -AGTTGGTGGCAAC-CT-TTTCAAAGT-CCACAC
** * *
150832 GAGTTGGTAACAACCTTTTCCAAGGCCGACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCC-ACAC
*
150864 GAGTTGGTGGTAACCTTTTCAAAAG-CACACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTC-CACAC
* * * * *
150896 GAGTTGTTGGCACCCTTTACAAAAATCCACATG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* ** * *
150929 AATTGGTGGCAAGATTTTCAAAGCCCAAAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
** * *
150959 AAGTTTTTGGCAACCTTTTCAAAAGCCCACAGG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* **
150992 AGTTGGTGGCAACCTTTACAAAGTTTACAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
** **
151022 AAGTTTATGGC-ACCATAGTCAAAGTCCACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* ** *
151053 GAGTTGG-GTGTAATATTTTCAAAAG-CTGACAC
1 -AGTTGGTG-GCAACCTTTTC-AAAGTC-CACAC
* * * * * *
151085 GAGTTGCTGGAAACTTTTTTAAAGTCTATAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* ** *
151116 AAGTTAGTGGC-ACCATAGTCAAAGTACACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
****
151147 GAGTTGGTGGCAACAAAGTCAAAGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
****
151178 GAGTTGGTGGCAACAAAGTCAAAGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
151209 GAGTTGGTGGCAACATTTTCAAAAGCCCACATA
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* * * *
151242 AGTTGGTAGCAACCTTTACAAA-TGCAAAAAC
1 AGTTGGTGGCAACCTTTTCAAAGT-C-CACAC
* * * * * * * *
151273 GAATTGGTCGCAGCTTTTTTTAAAGACCATATG
1 -AGTTGGTGGCAAC-CTTTTCAAAGTCCACA-C
* * *
151306 AGTTGCTGTCAACCTTTTCAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
*
151337 AGATGGTGGCAACCTTTTCAAAAGTCCAAAAGCCCAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCC---A---CAC
** * * ***
151374 AGAAGTTGCAGGCAACCATTTCATAGTTTGCAC
1 ---AGTTGGTGGCAACCTTTTCAAAGTCCACAC
** * * *
151407 GAGTTGGTGATAACATTTTCAAAAGTCTACGAG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCAC-AC
*
151440 AGTTGGTGGCAACCTTTTCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *
151471 GAGTTGGTGACAACCTTTTCAAAGTCCACATA
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* *
151503 AATTGTTGGCAACCTTTTCAAAAG-CTCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTC-CACAC
* * * *
151534 AAGTTGGTGACAACCTTTTCAAAATCCCATATG
1 -AGTTGGTGGCAACCTTTTCAAAGT-CCACA-C
* * *
151567 AGTTGGTAGCAACATTTTCCAAAG-CTCACATA
1 AGTTGGTGGCAACCTTTT-CAAAGTC-CACA-C
**
151599 AGTTGGTAACAACCTTTTCAAAGTCCACAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
151629 AAGTTGTTGGCAACATTTTCAAAAGTTCACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
151661 GAGTTGGTGGCAACCTTTTCAAA-TCCTACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCC-ACAC
* * *
151692 GAGTTGTTGGCAACGTTTTTAAAAG-CTCACAC
1 -AGTTGGTGGCAAC-CTTTTCAAAGTC-CACAC
* * *
151724 GAGTTGATGGTAA-CTTTTACAAAATCCCACAC
1 -AGTTGGTGGCAACCTTTT-CAAAGT-CCACAC
* * * *
151756 GAGTTGGTGGTAACCATTTTAAAAGCCCACGC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
*
151788 GAGTTGGTGGTAACCTTTTCAAAG-CTCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTC-CACAC
* * * *
151819 GAGTTTGTGGC-A-CTATAGTCAAAGTCTACATG
1 -AGTTGGTGGCAACCT-T-TTCAAAGTCCACA-C
* * * *
151851 AATTGGTAGTAACCTTTTCAAAAG-CCTACAT
1 AGTTGGTGGCAACCTTTTC-AAAGTCC-ACAC
* *
151882 ATGTTGGTGGTAACCTTTTCAAAAGCCCACAC
1 A-GTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * *
151914 GAGTTGTTGGCAACCATTTCAAAGTCTACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
*** * * *
151945 GAGTTGACAGAAACC-TTTCAAAAGTCTACAGA
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* *
151977 AGTTGGTGGCAACCTTTTCAAAAGCCCAAAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
**
152008 GAGTTGGAAGCAA-CTATTTCAATA-TCCACAC
1 -AGTTGGTGGCAACCT-TTTCAA-AGTCCACAC
* * *
152039 GAGTTGGTGGCAACCTTTTGAAAAGTCTACAAG
1 -AGTTGGTGGCAACCTTTT-CAAAGTCCAC-AC
* *
152072 AGTTGGTGGTAACCTTTTCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * * * *
152103 AAGTTAGTGACAACTTTTTCAAAATTCCGCAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * * *
152135 GAGTTGGTGGTAACCTTTTTAAAATTTCACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* * * * * *
152167 GTGTTGGTAGCAACCATTTCAAAGGCTTACATG
1 -AGTTGGTGGCAACCTTTTCAAAGTC-CACA-C
* * * *
152200 AGTTTGTGGTAACCTTTTTAAAAGCCCACAC
1 AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* **
152231 GAGTTGGTGGCAACCTTTTCAAAGCCCACGTG
1 -AGTTGGTGGCAACCTTTTCAAAGTCCAC-AC
* * **
152263 ATTTGTTGGCAACCGTTTAAAAAGTCCACAC
1 AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
*
152294 GAGTTGGTGGCAACCTTTTCAAAGTTCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* ** * *
152325 AAGTTTGG-GGCAACATAGTCATAGTCCACATG
1 -AG-TTGGTGGCAACCTTTTCAAAGTCCACA-C
* * *
152357 AGTTGGTGGTAACCTTTTCAGAAGGCTACAC
1 AGTTGGTGGCAACCTTTTCA-AAGTCCACAC
* *
152388 AAGTTGGTGGCAACCTTTTCAAAAG-CTTACCC
1 -AGTTGGTGGCAACCTTTTC-AAAGTC-CACAC
* * * * *
152420 GAATTGGTGGAAACTTTTTTAAAGTCCACATG
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* *
152452 AGTTGGTGGCAACCTTTTCAATA-ACCTATAC
1 AGTTGGTGGCAACCTTTTCAA-AGTCC-ACAC
* ** * * *
152483 GAGTTGGTGGTAATTTTTTCGAAGTCTACATA
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
*
152515 AGTTGGTGGCAACCTTTTCAAAGTCTACAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
152545 AAGTTGATTGC--CCTATAGTCAAAGTCCACAC
1 -AGTTGGTGGCAACCT-T-TTCAAAGTCCACAC
* * * *
152576 GAGTAGGTGGCAACCTTTCCAGAAG-CCTTCATA
1 -AGTTGGTGGCAACCTTTTCA-AAGTCC-ACA-C
* * *
152609 AGTTGGTGGTAACCTTTTCAAAGTCTATAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
*
152639 AAGTTGGTGGC-ACCATATTCAAAGTCCACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
** ** * * *
152670 AAGTTGAAGGCAAAATTTTTAAAAGCCCGCAC
1 -AGTTGGTGGC-AACCTTTTCAAAGTCCACAC
** * * * *
152702 GAAATGGTGGTAACTTTTTTAAAAGCCCACAC
1 -AGTTGGTGGCAAC-CTTTTCAAAGTCCACAC
* * * *
152734 GAGTTGGTGGCAGCCTTTTTAAATGCCCACATG
1 -AGTTGGTGGCAACCTTTTCAAA-GTCCACA-C
* * *
152767 ACTTGATGGCAACCTTTTCAAAGTCTACAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
152797 GAGTTGGTGGTAACTTTTTCAAAG-CCTGCAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCC-ACAC
* * *
152828 GAGTTAGTGGCAACCTTGTCAATGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * *
152859 AAGTTTGTGGTAATCTTTTCAAAAGTCCATAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *
152891 TCGTTGGGGGCAACCTTTTCAAAGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * *
152922 TAGTTGATGGCAGCTTTTTTAAAAG-CCTACAC
1 -AGTTGGTGGCAAC-CTTTTCAAAGTCC-ACAC
* * *
152954 GAGTTGATGGCAGCCTTTTTAAAAG-CCTACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCC-ACAC
* * *
152986 GAGTTGATGGCAGCCTTTTTAAAAG-CCTACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCC-ACAC
* * *
153018 GAGTTGATGGCAACCTTTTCAAAATCCGCAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* *
153049 GAGTTGGTGGCAACCTTTTTATAG-CCAACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCC-ACAC
* * * **
153080 GAGTTGGTAGCAACATTTTTAAAGTATACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
*
153111 GAGTTGGTGGCAACCATTTCAAAAGTCCACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * *
153143 TAGTTGGAGGCAACCATTTCAAAGTTCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
*
153174 GAGTTGGT-GCTAACCTTTTCAAA-TGCTCATAC
1 -AGTTGGTGGC-AACCTTTTCAAAGT-C-CACAC
** ** * *
153206 GAGCAGGTGGCAATATTTTCAAAGTCTATAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
*
153237 AAGTTGGTGGC--CCTATAGTCAAAGTCCACAC
1 -AGTTGGTGGCAACCT-T-TTCAAAGTCCACAC
* *** *
153268 -GCATTGGTGGTATTATTTTCGAAAG-CCTACATG
1 AG--TTGGTGGCAACCTTTTC-AAAGTCC-ACA-C
* *
153301 AGTTGGTGGCAACCTTTTCAAAAGCCCATAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
*** **
153332 GAGTTGGTGGTTGCCCTTTT-AAAAACCTACAC
1 -AGTTGGTGG-CAACCTTTTCAAAGTCC-ACAC
* * *
153364 GAGTTGATGGCAACCTTTTCAAAGTCCATAGG
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* *
153396 AGTTGGTGGTAACCTTTTCAAAG-CACATAC
1 AGTTGGTGGCAACCTTTTCAAAGTC-CACAC
* *
153426 GAGTTAGTGGCAACCTTTTCAAAGTCCACATG
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* *
153458 AGTTGGTGGCAATC-TTTCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* ** * *
153488 GAGTTGTTGGCTGCCTTTTTAAAAGGCCACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* * *
153520 AAGTTGATAGCAACCTTTTCAAATTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * * *
153551 AAGTTAAG-GGTAACTTTTTCAAAG-CCCCTATG
1 -AGTT-GGTGGCAACCTTTTCAAAGTCCAC-A-C
* * *
153583 AGTTAGTGGCAAACTTTTCAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* * *
153614 AGCTGCTGGCAACCTTTTCAAAAG-CACAAAC
1 AGTTGGTGGCAACCTTTTC-AAAGTC-CACAC
* * *
153645 TAATTGGTGGCAACCCTTTCAATGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
*
153676 TAGTTGGTGGCAACCATTTCAAAGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
153707 GAGTTGATGGCAACC-TTTCAAAAG-CCTAAAAG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCC--ACAC
*
153739 AGTTGGTGGTAACCTTTTCAAAAGCCCAAATGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAG------T--CCACAC
* *
153778 GAGTTGGTGACAACCATTTT-AAAGTCTACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* * *
153809 GAGTTGGTGGCAACTTTTTCAAAAGTCTACAAG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCAC-AC
** *
153842 AGTTATTGGCAACCTTTTCGAAGTCCACAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
153872 AAGTTGTTGGCAACTTTTTCAAAAGCCCACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * * *
153904 GAATTGGTGGTAACATTTTTGAAA-TCCTACATGC
1 -AGTTGGTGGCAAC-CTTTTCAAAGTCC-ACA--C
* *
153938 -GTTGGTGGCAAACTTTTCAAAATCTCACAC
1 AGTTGGTGGCAACCTTTTCAAAGTC-CACAC
* * *
153968 GAGTTGGTGACAACCATTTCAAAGTCCACTC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * **
153999 AAGCTGTTGGCAACCTTTTCAAAAACCCACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * * *
154031 GAGTTGCTAGCAACATTTTCAAAATCCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGT-CCACAC
* * *
154063 GAGTTGCTGGCAACC-TTTCAAAATCCCCCAC
1 -AGTTGGTGGCAACCTTTTCAAAGT-CCACAC
* * *
154094 GAGTTGGTGGTAAGCTTTACAAATGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAA-GTCCACAC
* * * *
154126 GAGTTGGTGGCAACCTTTTGAAAGCCCAAATG
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* * * *
154158 AGTTGTTGGCAACCTTTTCAAAAGCCCATAGG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* *
154190 AGTTGGTGGCAACCTTTTCAAAAATCCACAG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *
154221 AGTTGGTGGCAACCTTTTCAAAAATCCACATG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* * * *
154253 AATTGGTGGTAACCATTTCAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
** * * * *
154284 AGTTAATAGCAACC-GTTCAAAAGTCCATAAG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCA-CAC
* *
154315 AGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCC---A---CAC
* * *
154352 ATATGTAGGTGG-ATACCTTTTCAAAAGTCTGTA-AG
1 --A-GTTGGTGGCA-ACCTTTTC-AAAGTC--CACAC
* *
154387 AGTTGGTGGCAACCTCTTCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * *
154418 GAGTTGGTGACAACTTTTTCAAAGTCCACAGA
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* * *
154450 AGTTGTTGGCAACCTTTTCAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* * *
154482 TGTTGGTGGCAACCTTTTCAAAATCTCGCAC
1 AGTTGGTGGCAACCTTTTCAAAGTC-CACAC
* * * *
154513 GAGTTCGTGGTAACCTTTTTAAAATCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * *
154544 AAGTTGGTAGCAACC-TTTCGAAGGCCCACATA
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
** * * ** * *
154576 AGTTAATGGTAACCATTTCAAAAAACCAAATG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* * * **
154608 AGTTGGTAGTAAACTTTTCAAAAAACCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * *
154639 GAGTTGGTGGTAACCTATTCAAAAATCCACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * * *
154671 GAATTTGTGGCAACCATTTCAAAGTCCACATG
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
** ** *
154703 AGTTAATGGCAGTC-TTTCAAAAGTCCACAAG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCAC-AC
** * *
154734 AGTTATTGGCAATCTTTTCAAAAGCTCAAAAGCCCAAAC
1 AGTTGGTGGCAACCTTTTC-AAAG-T-------CCACAC
* *
154773 GAGTTGGTAGCAACCTTTTCAAAAG-CCTAGC-G
1 -AGTTGGTGGCAACCTTTTC-AAAGTCC-A-CAC
* *
154805 AGTTGGTGGTAACCTTTTCAAAGTCTACAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
154835 GAGTTGGTGGCAA-GTTTTCCAAAGTCTATAC
1 -AGTTGGTGGCAACCTTTT-CAAAGTCCACAC
** * *
154866 AAGTTGGTGGC-ACCATAGTCAAAGTCCAAATG
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACA-C
* * * *
154898 AGTTAGG-GGCAACATTTTTAGAAGCCCACAAG
1 AGTT-GGTGGCAACCTTTTCA-AAGTCCAC-AC
* *
154930 AGTTGGTGGCAACCTTTTCAAAGTCTAATAC
1 AGTTGGTGGCAACCTTTTCAAAGTC-CACAC
** *
154961 AAGTTGGTGGC-ACCATAGTCAAAGTCCCCAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* * *
154992 GTGTTGGTGGCAACATTTTCAAAAG-CCTACATG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCC-ACA-C
* * * * * *
155025 AATTGGCGACAAACTTTTCAATGTCCACAAG
1 AGTTGGTGGCAACCTTTTCAAAGTCCAC-AC
*
155056 AGTTGGTGGCAACC--TAC-AAGT------
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * ** *** *** ** * * * *
155077 TGGTGGTAAC-CTTTTCAAAGCGCACAAAAGT
1 AGTTGGTGGCAACCTTTTCAAAG-TCCACA-C
* * ** * * ** *
155108 TGATGGTACCATA---GTTAAAGTTCACAC-G
1 AGTTGGTGGCA-ACCTTTTCAAAGTC-CACAC
* * * *
155136 AGTTGGTGGCAACCTATTAAAAGCCCACATG
1 AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* * ** *
155167 AGTTTGTGGTAAATTTTTCAAAGTACACGTA-
1 AGTTGGTGGCAACCTTTTCAAAGTCCAC--AC
* *
155198 AGTTGTTGGCAATCTTTTCAAAGTCCACAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* ** *
155228 AAGTTGGCGGC-ACCATAGTCGAAGTCCACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* * * * *
155259 GAGTTAGTGGTAACCTTCTCAAAGCCCATAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* *
155290 GAGTTGATGGCAACCTTTTCAAAATCCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGT-CCACAC
* * *
155322 GAGTTGGTGACAACCTTTTTAGAGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* *
155353 AAGTTGTTGGCAACCTTTTCAAAAG-CTCATAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTC-CACAC
* * *
155385 GAGTTGGTGGCAATCTTTTCAAAATCCCACATG
1 -AGTTGGTGGCAACCTTTTCAAAGT-CCACA-C
*
155418 AGTTGGTGGCAACCTTTTCAAAATCCCACAC
1 AGTTGGTGGCAACCTTTTCAAAGT-CCACAC
* *
155449 GAGTTGGTAGCAACCTTTTCAAAAGCCCACAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *
155481 GAGTTGGTGGCAA-CTTCTGTAAAAGTCCATAC
1 -AGTTGGTGGCAACCTT-T-TCAAAGTCCACAC
* * * *
155513 GAGTTGGTCGTAACCTTTTCAAA-ACCTAAAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCC-ACAC
* ** * * *
155544 GAGATATTGGCAACCTTTTTAAAAG-CCTATAGG
1 -AGTTGGTGGCAACC-TTTTCAAAGTCC-ACA-C
* * *
155577 AATTGGCGGCAACCTTTTCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* * *
155608 GAATTGGTGGTAACCTTTTCAAAGCCCACTTA-
1 -AGTTGGTGGCAACCTTTTCAAAGTCCAC--AC
* *
155640 ATTTGGTGGCAACCGTTTCAAAAG-CCTA-AC
1 AGTTGGTGGCAACCTTTTC-AAAGTCC-ACAC
* * *
155670 GTGTTGGTGGTAACCTTTTCAAAGTCTACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* ** * *
155701 GAGTTGGT-ACAATATTTTAAAAAGCCCACAC
1 -AGTTGGTGGCAACCTTTT-CAAAGTCCACAC
* *
155732 AAGTTGGTGGCAAACTTTTCAAAATCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * *
155763 GAATTGGTGGCAA-C-TTACGAGTTAGTGGCA-AC
1 -AGTTGGTGGCAACCTTTTC-A--AAGT-CCACAC
* ** * * * * * * *
155795 -CTTTTTAAAGTCCACATGAGTT---GGTGGCAC-T
1 AGTTGGT---GGCAACCT--TTTCAAAGT-CCACAC
** * *
155826 A-TT-GT--CAA---AGTC-CA---CAC-G
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* *
155844 AGTTGGTGGCAACTTTTTCAAA--ACACA-
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
155871 AGTTAGTGGTAACCTTTTCAAAGTCCACATG
1 AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
* * *
155902 AGTTGGTGGCAATCTTTTTAAAGTCCATAC
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * **
155932 GTGTTGCTGGC-TCCATAGTCAAAGTCCACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGTCCACAC
* * * * *
155963 GAGTTAGTGGCAGCTTTTTCAAAAGCCCGCAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *** *
155995 GAATTGGTAAAAACCTTTTCAAAGTCTACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * * * *
156026 GAGTTGGTGGCAAGCTTTCCAATGTCTATACC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACA-C
** * * *
156058 AGTTGGTGGC-ACCATAGTCAATGTCCAAAGG
1 AGTTGGTGGCAACC-TTTTCAAAGTCCACA-C
* * *
156089 AGTTTGGGGGCAACCTTTTCAGAAGCCCACATG
1 AG-TTGGTGGCAACCTTTTCA-AAGTCCACA-C
* * * *
156122 AGTTGCTGGCAACGTTTTCAAAATCC-CAA
1 AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* * *
156151 ATGCGTTGGTGGAAAACTTTTCAAAATCCCACAC
1 A---GTTGGTGGCAACCTTTTCAAAGT-CCACAC
* * *
156185 GAGTTGGTGACAACCATTTCAAAG-CCTATAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCC-ACAC
* * * *
156216 AAGCTGTTGGCAACCTTTTCAAAAGCCCATAC
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
*
156248 GAGTTGGTGGCAACCTTTTTCAAAATCCCACAC
1 -AGTTGGTGGCAACC-TTTTCAAAGT-CCACAC
* *
156281 GTGTTGGTGGCAACC-TTTCAAAATCCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGT-CCACAC
* * * *
156312 AAGTTAGTAGCAACATTTTTAAAAG-CCTACAC
1 -AGTTGGTGGCAAC-CTTTTCAAAGTCC-ACAC
* * * * *
156344 GAGTTAGTGGTAAGCTTTGCAAATGTCCACATG
1 -AGTTGGTGGCAACCTTTTCAAA-GTCCACA-C
* * *
156377 AGTTGGTGGCAACTTTTTGAAAG-CTCAAAC
1 AGTTGGTGGCAACCTTTTCAAAGTC-CACAC
* * ** * *
156407 TTGTTGTTGGCAACCTTTTCAAAAACCCATAAG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCA-CAC
156440 AGTTGGTGGCAACCTTTTCAAAAAG-CCACAC
1 AGTTGGTGGCAACCTTTTC--AAAGTCCACAC
* * *
156471 GAGTTGGTGGCAATCTTTTCAAAAATCCACATG
1 -AGTTGGTGGCAACCTTTTC-AAAGTCCACA-C
* * * **
156504 AATTGGTGGTAA-TTATTTCAAAGTCCACTTG
1 AGTTGGTGGCAACCT-TTTCAAAGTCCAC-AC
** * * * *
156535 AGTTAATGGCAACC-ATTCAAAAGTCTATAAG
1 AGTTGGTGGCAACCTTTTC-AAAGTCCA-CAC
* *
156566 AGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTT--------C-AAAGTCCACAC
* *
156605 AAGTAGGTGGCAACCATTTCAAAGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
** *
156636 AAGTTGGTGG-ATACCTTTTCAAAAGTTTGTA-AA
1 -AGTTGGTGGCA-ACCTTTTC-AAAG--TCCACAC
*
156669 AGTTGGTGGCAACCTTTTCAAAAGCCCACAC
1 AGTTGGTGGCAACCTTTTC-AAAGTCCACAC
* *
156700 GAGTTGATGACAACCTTTTCAAAGTCCACAC
1 -AGTTGGTGGCAACCTTTTCAAAGTCCACAC
* *
156731 AAGTTGTTGGCAACCTTTTCAAATGCCCACAC
1 -AGTTGGTGGCAACCTTTTCAAA-GTCCACAC
*
156763 GTGTTGGTGGCAAC
1 -AGTTGGTGGCAAC
156777 TGTCGTAACG
Statistics
Matches: 4854, Mismatches: 1218, Indels: 897
0.70 0.17 0.13
Matches are distributed among these distances:
18 4 0.00
19 2 0.00
20 3 0.00
21 6 0.00
22 4 0.00
23 1 0.00
25 4 0.00
26 1 0.00
27 23 0.00
28 11 0.00
29 29 0.01
30 131 0.03
31 2134 0.44
32 2171 0.45
33 167 0.03
34 13 0.00
35 4 0.00
37 2 0.00
38 2 0.00
39 15 0.00
40 120 0.02
41 7 0.00
ACGTcount: A:0.31, C:0.22, G:0.20, T:0.28
Consensus pattern (30 bp):
AGTTGGTGGCAACCTTTTCAAAGTCCACAC
Found at i:151118 original size:94 final size:94
Alignment explanation
Indices: 150974--151153 Score: 245
Period size: 94 Copynumber: 1.9 Consensus size: 94
150964 TTTGGCAACC
* * * *
150974 TTTTCAAAAGCCCACAGGAGTTGGTGGCAACCTTTACAAAGTTTACACAAGTTTA-TGGCACCAT
1 TTTTCAAAAGCCCACACGAGTTGCTGGAAACCTTTACAAAGTCTACACAAG-TTAGTGGCACCAT
*
151038 AGTCAAAGTCCACACGAGTTGGGTGTAATA
65 AGTCAAAGTACACACGAGTTGGGTGTAATA
** * ** *
151068 TTTTCAAAAGCTGACACGAGTTGCTGGAAACTTTTTTAAAGTCTATACAAGTTAGTGGCACCATA
1 TTTTCAAAAGCCCACACGAGTTGCTGGAAACCTTTACAAAGTCTACACAAGTTAGTGGCACCATA
151133 GTCAAAGTACACACGAGTTGG
66 GTCAAAGTACACACGAGTTGG
151154 TGGCAACAAA
Statistics
Matches: 74, Mismatches: 11, Indels: 2
0.85 0.13 0.02
Matches are distributed among these distances:
93 3 0.04
94 71 0.96
ACGTcount: A:0.32, C:0.19, G:0.21, T:0.28
Consensus pattern (94 bp):
TTTTCAAAAGCCCACACGAGTTGCTGGAAACCTTTACAAAGTCTACACAAGTTAGTGGCACCATA
GTCAAAGTACACACGAGTTGGGTGTAATA
Found at i:151163 original size:25 final size:27
Alignment explanation
Indices: 151135--151223 Score: 92
Period size: 31 Copynumber: 3.1 Consensus size: 27
151125 GCACCATAGT
151135 CAAAGT-A-CACACGAGTTGGTGGCAA
1 CAAAGTAACCACACGAGTTGGTGGCAA
151160 CAAAGTCAAAGTCCACACGAGTTGGTGGCAA
1 CAAAGT--AA--CCACACGAGTTGGTGGCAA
151191 CAAAGTCAAAGTCCACACGAGTTGGTGGCAA
1 CAAAGT--AA--CCACACGAGTTGGTGGCAA
151222 CA
1 CA
151224 TTTTCAAAAG
Statistics
Matches: 58, Mismatches: 0, Indels: 6
0.91 0.00 0.09
Matches are distributed among these distances:
25 6 0.10
28 1 0.02
31 51 0.88
ACGTcount: A:0.36, C:0.22, G:0.26, T:0.16
Consensus pattern (27 bp):
CAAAGTAACCACACGAGTTGGTGGCAA
Found at i:152662 original size:125 final size:124
Alignment explanation
Indices: 152357--152676 Score: 310
Period size: 125 Copynumber: 2.5 Consensus size: 124
152347 AGTCCACATG
* * * *
152357 AGTTGGTGGTAACCTTTTCAGAAGGCTACACAAGTTGGTGGCAACCTTTTCAAAAG-CTTACCCG
1 AGTTGGTGGTAACCTTTTCA-AAGTCTACACAAGTTGGTGGCAACCTATTC-AAAGTC-CACAC-
* * ** ** * * * *
152421 AA-TTGGTGGAAACT-TTTTTAAAGTCCACATGAGTTGGTGGCAACCTTTTCAATAACCTATAC
62 AAGTTGATTG-CCCTATAGTCAAAGTCCACACGAGTAGGTGGCAACCTTTCCAATAACCTATAC
** * * * *
152483 GAGTTGGTGGTAATTTTTTCGAAGTCTACATAAGTTGGTGGCAACCTTTTCAAAGTCTACACAAG
1 -AGTTGGTGGTAACCTTTTCAAAGTCTACACAAGTTGGTGGCAACCTATTCAAAGTCCACACAAG
*
152548 TTGATTGCCCTATAGTCAAAGTCCACACGAGTAGGTGGCAACCTTTCCAGA-AGCCTTCATA-
65 TTGATTGCCCTATAGTCAAAGTCCACACGAGTAGGTGGCAACCTTTCCA-ATAACC-T-ATAC
*
152609 AGTTGGTGGTAACCTTTTCAAAGTCTATACAAGTTGGTGGC-ACCATATTCAAAGTCCACACAAG
1 AGTTGGTGGTAACCTTTTCAAAGTCTACACAAGTTGGTGGCAACC-TATTCAAAGTCCACACAAG
152673 TTGA
65 TTGA
152677 AGGCAAAATT
Statistics
Matches: 162, Mismatches: 24, Indels: 16
0.80 0.12 0.08
Matches are distributed among these distances:
124 7 0.04
125 104 0.64
126 31 0.19
127 20 0.12
ACGTcount: A:0.29, C:0.20, G:0.21, T:0.30
Consensus pattern (124 bp):
AGTTGGTGGTAACCTTTTCAAAGTCTACACAAGTTGGTGGCAACCTATTCAAAGTCCACACAAGT
TGATTGCCCTATAGTCAAAGTCCACACGAGTAGGTGGCAACCTTTCCAATAACCTATAC
Found at i:152682 original size:94 final size:94
Alignment explanation
Indices: 152511--152682 Score: 247
Period size: 94 Copynumber: 1.8 Consensus size: 94
152501 TCGAAGTCTA
*
152511 CATAAGTTGGTGGCAACCTTTTCAAAGTCTACACAAGTTGATTGCCCTATAGTCAAAGTCCACAC
1 CATAAGTTGGTGGCAACCTTTTCAAAGTCTACACAAGTTGATGGCCCTATAGTCAAAGTCCACAC
* **
152576 GAGTAGGTGGCAACCTTTCCAGAAGCCTT
66 AAGTAGAAGGCAACCTTTCCAGAAGCCTT
* * * *
152605 CATAAGTTGGTGGTAACCTTTTCAAAGTCTATACAAGTTGGTGGCACC-ATATTCAAAGTCCACA
1 CATAAGTTGGTGGCAACCTTTTCAAAGTCTACACAAGTTGATGGC-CCTATAGTCAAAGTCCACA
*
152669 CAAGTTGAAGGCAA
65 CAAGTAGAAGGCAA
152683 AATTTTTAAA
Statistics
Matches: 68, Mismatches: 9, Indels: 2
0.86 0.11 0.03
Matches are distributed among these distances:
94 66 0.97
95 2 0.03
ACGTcount: A:0.31, C:0.22, G:0.20, T:0.27
Consensus pattern (94 bp):
CATAAGTTGGTGGCAACCTTTTCAAAGTCTACACAAGTTGATGGCCCTATAGTCAAAGTCCACAC
AAGTAGAAGGCAACCTTTCCAGAAGCCTT
Found at i:153570 original size:125 final size:125
Alignment explanation
Indices: 153427--153768 Score: 327
Period size: 125 Copynumber: 2.7 Consensus size: 125
153417 AGCACATACG
* *
153427 AGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAATCTTTCAAAAGCCCACACGAGT
1 AGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAAACTTTCAAAAGCCCACACGAGC
* ** * * *
153492 TGTTGGCTGCCTTTTTAAAAGGC-CACAC-AAGTTGATAGCAACCTTTTCAAAT-TCCACACA
66 TGCTGGCAACCTTTTCAAAA-GCACAAACTAA-TTGATAGCAACCCTTTC-AATGTCCACACA
* * * * * *
153552 AGTTAAG-GGTAACTTTTTCAAAG-CCCCTATGAGTTAGTGGCAAACTTTTC-AAAGTCCACATG
1 AGTT-AGTGGCAACCTTTTCAAAGTCCAC-ATGAGTTGGTGGCAAAC-TTTCAAAAGCCCACACG
* * *
153614 AGCTGCTGGCAACCTTTTCAAAAGCACAAACTAATTGGTGGCAACCCTTTCAATGTCCACACT
63 AGCTGCTGGCAACCTTTTCAAAAGCACAAACTAATTGATAGCAACCCTTTCAATGTCCACACA
* * * * * * * * *
153677 AGTTGGTGGCAACCATTTCAAAGTCCACACGAGTTGATGGCAACCTTTCAAAAGCCTAAAAGAGT
1 AGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAAACTTTCAAAAGCCCACACGAGC
* * *
153742 TGGTGGTAACCTTTTCAAAAGCCCAAA
66 TGCTGGCAACCTTTTCAAAAGCACAAA
153769 TGCCCACACG
Statistics
Matches: 174, Mismatches: 34, Indels: 18
0.77 0.15 0.08
Matches are distributed among these distances:
124 13 0.07
125 150 0.86
126 11 0.06
ACGTcount: A:0.31, C:0.23, G:0.19, T:0.27
Consensus pattern (125 bp):
AGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAAACTTTCAAAAGCCCACACGAGC
TGCTGGCAACCTTTTCAAAAGCACAAACTAATTGATAGCAACCCTTTCAATGTCCACACA
Found at i:153817 original size:71 final size:71
Alignment explanation
Indices: 153701--153833 Score: 178
Period size: 71 Copynumber: 1.9 Consensus size: 71
153691 ATTTCAAAGT
* *
153701 CCACACGAGTTGATGGCAACCTTTCAAAAGCCTAAAAGAGTTGGTGGTAACCTTTTCAAAAGCCC
1 CCACACGAGTTGATGACAACCTTTCAAAAGCCTAAAAGAGTTGGTGGCAACCTTTTCAAAAGCCC
153766 AAATGC
66 AAATGC
* * * * * *
153772 CCACACGAGTTGGTGACAACCATTT-TAAAGTCTACACGAGTTGGTGGCAACTTTTTCAAAAG
1 CCACACGAGTTGATGACAACC-TTTCAAAAGCCTAAAAGAGTTGGTGGCAACCTTTTCAAAAG
153834 TCTACAAGAG
Statistics
Matches: 53, Mismatches: 8, Indels: 2
0.84 0.13 0.03
Matches are distributed among these distances:
71 50 0.94
72 3 0.06
ACGTcount: A:0.32, C:0.23, G:0.20, T:0.25
Consensus pattern (71 bp):
CCACACGAGTTGATGACAACCTTTCAAAAGCCTAAAAGAGTTGGTGGCAACCTTTTCAAAAGCCC
AAATGC
Found at i:154777 original size:40 final size:40
Alignment explanation
Indices: 154719--154798 Score: 99
Period size: 40 Copynumber: 2.0 Consensus size: 40
154709 TGGCAGTCTT
* * * *
154719 TCAAAAGTCCACAAGAGTTATTGGCAATCTTTTCAAAAGC
1 TCAAAAGCCCACAAGAGTTAGTAGCAACCTTTTCAAAAGC
*
154759 TCAAAAGCCCA-AACGAGTTGGTAGCAACCTTTTCAAAAGC
1 TCAAAAGCCCACAA-GAGTTAGTAGCAACCTTTTCAAAAGC
154799 CTAGCGAGTT
Statistics
Matches: 34, Mismatches: 5, Indels: 2
0.83 0.12 0.05
Matches are distributed among these distances:
39 2 0.06
40 32 0.94
ACGTcount: A:0.38, C:0.23, G:0.16, T:0.24
Consensus pattern (40 bp):
TCAAAAGCCCACAAGAGTTAGTAGCAACCTTTTCAAAAGC
Found at i:155834 original size:80 final size:80
Alignment explanation
Indices: 155733--155912 Score: 202
Period size: 89 Copynumber: 2.1 Consensus size: 80
155723 AGCCCACACA
*
155733 AGTTGGTGGCAAACTTTTCAAAATCCACACGAATTGGTGGCAAC-TT-ACGAGTTAGTGGCAACC
1 AGTTGGTGGC--ACTTTTCAAAATCCACACGAATTGGTGGCAACTTTAACAAGTTAGTGGCAACC
*
155796 TTTTTAAAGTCCACATG
64 TTTTCAAAGTCCACATG
* *
155813 AGTTGGTGGCACTATTGTCAAAGTCCACACGAGTTGGTGGCAACTTTTTCAAAACACAAGTTAGT
1 AGTTGGTGGCACT-TT-TCAAAATCCACACGAATTGGTGGCAAC--TTT----A-ACAAGTTAGT
*
155878 GGTAACCTTTTCAAAGTCCACATG
57 GGCAACCTTTTCAAAGTCCACATG
155902 AGTTGGTGGCA
1 AGTTGGTGGCA
155913 ATCTTTTTAA
Statistics
Matches: 84, Mismatches: 5, Indels: 13
0.82 0.05 0.13
Matches are distributed among these distances:
78 3 0.04
79 2 0.02
80 35 0.42
83 2 0.02
89 42 0.50
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29
Consensus pattern (80 bp):
AGTTGGTGGCACTTTTCAAAATCCACACGAATTGGTGGCAACTTTAACAAGTTAGTGGCAACCTT
TTCAAAGTCCACATG
Found at i:155879 original size:27 final size:27
Alignment explanation
Indices: 155839--155892 Score: 72
Period size: 27 Copynumber: 2.0 Consensus size: 27
155829 GTCAAAGTCC
* * *
155839 ACACGAGTTGGTGGCAACTTTTTCAAA
1 ACACAAGTTAGTGGCAACCTTTTCAAA
*
155866 ACACAAGTTAGTGGTAACCTTTTCAAA
1 ACACAAGTTAGTGGCAACCTTTTCAAA
155893 GTCCACATGA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
27 23 1.00
ACGTcount: A:0.33, C:0.19, G:0.19, T:0.30
Consensus pattern (27 bp):
ACACAAGTTAGTGGCAACCTTTTCAAA
Found at i:155954 original size:89 final size:89
Alignment explanation
Indices: 155782--155954 Score: 220
Period size: 89 Copynumber: 1.9 Consensus size: 89
155772 GCAACTTACG
* *
155782 AGTTAGTGGCAACCTTTTTAAAGTCCACATGAGTTGGTGGCACTATTGTCAAAGTCCACACGAGT
1 AGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAATATTGTCAAAGTCCACACGAGT
* * **
155847 TGGTGGCAACTTTTTCAAAACACA
66 TGCTGGCAACATAGTCAAAACACA
* * * * * *
155871 AGTTAGTGGTAACCTTTTCAAAGTCCACATGAGTTGGTGGCAATCTTTTTAAAGTCCATACGTGT
1 AGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAATATTGTCAAAGTCCACACGAGT
**
155936 TGCTGGCTCCATAGTCAAA
66 TGCTGGCAACATAGTCAAA
155955 GTCCACACGA
Statistics
Matches: 70, Mismatches: 14, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
89 70 1.00
ACGTcount: A:0.28, C:0.20, G:0.21, T:0.31
Consensus pattern (89 bp):
AGTTAGTGGCAACCTTTTCAAAGTCCACATGAGTTGGTGGCAATATTGTCAAAGTCCACACGAGT
TGCTGGCAACATAGTCAAAACACA
Found at i:156076 original size:125 final size:120
Alignment explanation
Indices: 155779--156084 Score: 308
Period size: 120 Copynumber: 2.5 Consensus size: 120
155769 GTGGCAACTT
* * ** * ** * *
155779 ACGAGTTAGTGGCAACCTTTTTAAAGTCCACATGAGTTGGTGGCACTATTGTCAAAGTCCACACG
1 ACGAGTTGGTGGCAAGCTTTCCAAAGTCCATACCAGTTGGTGGCACCATAGTCAAAGTCCACACG
* ***
155844 AGTTGGTGGCAACTTTTTCAAAACACAAGTTAGTGGTAACCTTTTCAAAGTCCAC
66 AGTTAGTGGCAACTTTTTCAAAACACAAGTTAGTAAAAACCTTTTCAAAGTCCAC
* * ** ** * *
155899 ATGAGTTGGTGGCAATCTTTTTAAAGTCCATACGTGTTGCTGGCTCCATAGTCAAAGTCCACACG
1 ACGAGTTGGTGGCAAGCTTTCCAAAGTCCATACCAGTTGGTGGCACCATAGTCAAAGTCCACACG
* * *
155964 AGTTAGTGGCAGCTTTTTCAAAAGCCCGCACGAA-TTGGTAAAAACCTTTTCAAAGTCTAC
66 AGTTAGTGGCAACTTTTTCAAAA-----CAC-AAGTTAGTAAAAACCTTTTCAAAGTCCAC
* * *
156024 ACGAGTTGGTGGCAAGCTTTCCAATGTCTATACCAGTTGGTGGCACCATAGTCAATGTCCA
1 ACGAGTTGGTGGCAAGCTTTCCAAAGTCCATACCAGTTGGTGGCACCATAGTCAAAGTCCA
156085 AAGGAGTTTG
Statistics
Matches: 152, Mismatches: 28, Indels: 7
0.81 0.15 0.04
Matches are distributed among these distances:
120 76 0.50
125 74 0.49
126 2 0.01
ACGTcount: A:0.28, C:0.22, G:0.22, T:0.29
Consensus pattern (120 bp):
ACGAGTTGGTGGCAAGCTTTCCAAAGTCCATACCAGTTGGTGGCACCATAGTCAAAGTCCACACG
AGTTAGTGGCAACTTTTTCAAAACACAAGTTAGTAAAAACCTTTTCAAAGTCCAC
Found at i:156444 original size:63 final size:62
Alignment explanation
Indices: 156097--156777 Score: 262
Period size: 63 Copynumber: 10.6 Consensus size: 62
156087 GGAGTTTGGG
* * * * * * * * *
156097 GGCAACCTTTTCAGAAGCCCACATGAGTTGCTGGCAACGTTTTCAAAATCCCAAATGCGTTGGT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAAC-TTTTTAAAA-GCCACACGTGTTGTT
* * * * * ** * * ** *
156161 GGAAAACTTTTCAAAATCCCACACGAGTTGGTGACAACCATTTCAAAGCCTATACAAGCTGTT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAACTTTTTAAAAGCC-ACACGTGTTGTT
* * * *
156224 GGCAACCTTTTCAAAAGCCCATACGAGTTGGTGGCAACCTTTTTCAAAATCCCACACGTGTTGGT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA-CTTTTT-AAAA-GCCACACGTGTTGTT
* * * *
156289 GGCAACC-TTTCAAAATCCCACACA-AGTTAGTAGCAACATTTTTAAAAGCCTACACGAGTTAG-
1 GGCAACCTTTTCAAAAGCCCACA-AGAGTTGGTGGCAAC-TTTTTAAAAGCC-ACACGTGTT-GT
156351 T
62 T
* * * * * * * * *
156352 GGTAAGCTTTGCAAATGTCCACATGAGTTGGTGGCAACTTTTTGAAAGCTCAAACTTGTTGTT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAACTTTTTAAAAGC-CACACGTGTTGTT
* * * * *
156415 GGCAACCTTTTCAAAAACCCATAAGAGTTGGTGGCAACCTTTTCAAAAAGCCACACGAGTTGGT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA-CTTTT-TAAAAGCCACACGTGTTGTT
* ** * * * * ** * **
156479 GGCAATCTTTTCAAAAATCCACATGAATTGGTGGTAA-TTATTTCAAAGTCCACTTGAGTTAAT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAACTT-TTTAAAAG-CCACACGTGTTGTT
* * * * * * *
156542 GGCAACC-ATTCAAAAGTCTATAAGAGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACACA
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAA-CTTTT--------TAAAAG-CCACACG
* * *
156606 AGTAGGT
56 TGTTGTT
* * * **** *** *
156613 GGCAACCATTTC-AAAGTCCACACA-AGTTGGTGG-ATACCTTTTCAAAAGTTTGTAAAAGTTGG
1 GGCAACCTTTTCAAAAGCCCACA-AGAGTTGGTGGCA-A-CTTTTTAAAAG-CCACACGTGTTGT
156675 T
62 T
* * * * * **
156676 GGCAACCTTTTCAAAAGCCCACACGAGTTGATGACAACCTTTTCAAAGTCCACACAAGTTGTT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAACTTTTTAAAAG-CCACACGTGTTGTT
* * *
156739 GGCAACCTTTTCAAATGCCCACACGTGTTGGTGGCAACT
1 GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAACT
156778 GTCGTAACGT
Statistics
Matches: 459, Mismatches: 126, Indels: 65
0.71 0.19 0.10
Matches are distributed among these distances:
62 32 0.07
63 204 0.44
64 151 0.33
65 23 0.05
66 2 0.00
70 1 0.00
71 42 0.09
72 4 0.01
ACGTcount: A:0.31, C:0.23, G:0.19, T:0.27
Consensus pattern (62 bp):
GGCAACCTTTTCAAAAGCCCACAAGAGTTGGTGGCAACTTTTTAAAAGCCACACGTGTTGTT
Found at i:160264 original size:32 final size:32
Alignment explanation
Indices: 160228--161499 Score: 718
Period size: 32 Copynumber: 40.1 Consensus size: 32
160218 GTGTCTACAA
*
160228 CAACCTTTTCAAAATCCTACACGAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
*** *
160260 CAACCTTTTCAAAATATAACACGAGTTGGTAG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* *
160292 CAACCTTTTTAAAAGCCCACACGAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * * * *
160324 TAACCATTTCAAAAAT-CCACATGTGTTTGTAG
1 CAACCTTTTC-AAAATCCCACACGAGTTGGTGG
* * * * * *
160356 CAACCTTTTTAAAAGCCTACATGAGTTTGTGA
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * *
160388 CAACCTTTTCAAAGT-TCACACGAGTTTGTAG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
*** * *
160419 C-ACCGTAGCCAAAGT-CCACACGAG-T--TGC
1 CAACC-TTTTCAAAATCCCACACGAGTTGGTGG
* * * * **
160447 CAACATTTTTAGAAGCCCACGTGAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * * * **
160479 GAATCTTTTCAAAGT-CTATAAAAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
** * *
160510 C-ACCATAATCAAAGT-CCACATGAGTTGGTGG
1 CAACC-TTTTCAAAATCCCACACGAGTTGGTGG
* ** *
160541 CAACATTTTCAAAA-CCCGACATAAGTTGATGG
1 CAACCTTTTCAAAATCCC-ACACGAGTTGGTGG
* * * ** *
160573 CAGCCTTTTCTAAAGCCCACATAAGTTGATGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * *
160605 CAACCTTTTC-AAGT-CCACATGAGTTGGTTG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* *
160635 CAACATTTTTAAAAGCCAAAAAGT-CCACACGAGTTGGTGA
1 CAAC-CTTTT------C-AAAA-TCCCACACGAGTTGGTGG
* * * * *
160675 TAACCTTTTTAAAAGCCCGCATGAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * *
160707 CAACCTTTTCAAAAGT-CTATGA-GAGTTGGTCG
1 CAACCTTTTCAAAA-TCCCA-CACGAGTTGGTGG
* * *
160739 CAACCTTTTCAAAAGCCCACACGAATTGGTGA
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * * *
160771 TAACTTTTTCAAAGT-CAACACAAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * ** *
160802 CAACCTTTTTAAAAGCAAACACGAGTTGATGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * **
160834 AAACCTTTTCAAAATCGCATACGAGTTGGCAG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* ** **
160866 CAACTTTTTCAAAA-CCTGCA-GAGTTGGTAA
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * *
160896 CAACCTTTTCAAAGT-CCACACAAGTTGTTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * * * *
160927 TAACGTTTTCAAAAGCCTACATGAGTTGGTAG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * *
160959 CAACCTTTTCAAAATCCCAAATGCGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * *
160991 CAAACATTTCAAAATCCCACACGAGTAGGTGA
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * *
161023 CAACATTTTCAAAGT-CCACAC-ATGTTGTTAG
1 CAACCTTTTCAAAATCCCACACGA-GTTGGTGG
*
161054 CAACTTTTTCAAAATCCCACACGAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * * * *
161086 TAGCCTTTTTAAAATCCCACACAAATTAGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * *
161118 CAACCTTTGT-AAAGT-CAACACAAGTTGTTGG
1 CAACCTTT-TCAAAATCCCACACGAGTTGGTGG
* * *
161149 CAACCTTTTCAGAAGCCCACACTAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
*
161181 CAACCTTTTCAAAATCCCACATGAGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * *
161213 CAACCTTTGCAAAAGT-CCATACGAGTTGGTCG
1 CAACCTTTTCAAAA-TCCCACACGAGTTGGTGG
* * **
161245 CAACCTTTTC-AAAGCCCAAACGAGTTATTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * * * *
161276 CAACCTTTTCAATAGCCTACAGGAATTTGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* *
161308 CAACCTTTTCAAAAGCCCACACGAATTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * * ** *
161340 TAACCTTTTC-AAAGCTCACTTGATTTGGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
* * *
161371 CAACCGTTTCAAAAGCCTACAC-ATGTTGGTGG
1 CAACCTTTTCAAAATCCCACACGA-GTTGGTGG
* * *
161403 TAACCTTTTCAAAGT-CTACACGAGTTGGT-G
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
** * * *
161433 CAATATTTTAAAAAGCCCACACGAGTTTGTGG
1 CAACCTTTTCAAAATCCCACACGAGTTGGTGG
161465 C-ACACTTTTCAAAAT-CCACACGAGTTGGTGG
1 CAAC-CTTTTCAAAATCCCACACGAGTTGGTGG
161496 CAAC
1 CAAC
161500 TTACGAGTTA
Statistics
Matches: 931, Mismatches: 261, Indels: 96
0.72 0.20 0.07
Matches are distributed among these distances:
28 5 0.01
29 9 0.01
30 59 0.06
31 256 0.27
32 567 0.61
33 11 0.01
37 1 0.00
39 6 0.01
40 17 0.02
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (32 bp):
CAACCTTTTCAAAATCCCACACGAGTTGGTGG
Found at i:160670 original size:40 final size:40
Alignment explanation
Indices: 160615--160691 Score: 111
Period size: 40 Copynumber: 1.9 Consensus size: 40
160605 CAACCTTTTC
*
160615 AAGTCCACATGAGTTGGTTG-CAACATTTTTAAAAGCCAAA
1 AAGTCCACACGAGTTGG-TGACAACATTTTTAAAAGCCAAA
* *
160655 AAGTCCACACGAGTTGGTGATAACCTTTTTAAAAGCC
1 AAGTCCACACGAGTTGGTGACAACATTTTTAAAAGCC
160692 CGCATGAGTT
Statistics
Matches: 33, Mismatches: 3, Indels: 2
0.87 0.08 0.05
Matches are distributed among these distances:
39 2 0.06
40 31 0.94
ACGTcount: A:0.35, C:0.19, G:0.18, T:0.27
Consensus pattern (40 bp):
AAGTCCACACGAGTTGGTGACAACATTTTTAAAAGCCAAA
Found at i:160829 original size:127 final size:126
Alignment explanation
Indices: 160654--164477 Score: 1436
Period size: 127 Copynumber: 30.7 Consensus size: 126
160644 TAAAAGCCAA
* ** * * *
160654 AAAGTCCACACGAGTTGGTGATAACCTTTTTAAAAGCCCGCATGAGTTGGTGGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* * * *
160719 AAGTCTATGA-GAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAATTGGTGATAACTTTTTC
66 AA-TCCAT-ACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * ** * *
160781 AAAGTCAACACAAGTTGGTGGCAACCTTTTTAAAAGCAAACACGAGTTGATGGAAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* ** *
160846 AATCGCATACGAGTTGG-CAGCAACTTTTTCAAAA-CCTGCA-GAGTTGGTAACAACCTTTTC
66 AATC-CATACGAGTTGGTC-GCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * *
160906 AAAGTCCACACAAGTTGTTGGTAACGTTTTCAAAAGCCTACATGAGTTGGTAGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* * * * * * * * *
160971 AATCCCAAATGCGTTGGTGGCAAACATTTCAAAATCCCACACGAGTAGGTGACAACATTTTC
66 AAT-CCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * * * *
161033 AAAGTCCACACATGTTGTTAGCAACTTTTTCAAAATCCCACACGAGTTGGTGGTAGCCTTTTTAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* * * * * * * * * *
161098 AATCCCACACAAATTAGTGGCAACCTTTGT--AAAGTCAACACAAGTTGTTGGCAACCTTTTC
66 AAT-CCATACGAGTTGGTCGCAACCTTT-TCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * *
161159 AGAAGCCCACACTAGTTGGTGGCAACCTTTTCAAAATCCCACATGAGTTGGTGGCAACCTTTGCA
1 A-AAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* ** *
161224 AAAGTCCATACGAGTTGGTCGCAACCTTTTC-AAAGCCCAAACGAGTTATTGGCAACCTTTTC
65 AAA-TCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * *
161286 AATAG-CCTACAGGAA-TTTGTGGCAACCTTTTCAAAAGCCCACACGAATTGGTGGTAACCTTTT
1 AA-AGTCC-ACA-CAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTT
* * * * * * **
161349 C-AAAGCTCACT-TGATTTGGTGGCAACCGTTTCAAAAGCCTACAC-ATGTTGGTGGTAACCTTT
63 CAAAATC-CA-TACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGA-GTTGGTGACAACCTTT
161411 TC
125 TC
* * ** * *
161413 AAAGTCTACACGAGTTGGT-GCAATATTTTAAAAAGCCCACACGAGTTTGTGGC-ACACTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCA
* * * ** *
161476 AAATCCACACGAGTTGGTGGCAA-C--TT-----------ACGAGTTAGTGGTAACCTTTTT
65 AAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
** * * * * * *
161524 AAAGTCCACATGAGTTAGTGGC-ACCATTGTC-AAAGTCCACACGAGTTGGTGGTAGCTTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* * * * * ** * *
161587 AAA---A-ACAAGTTAGTCGTAACCTTTTC-AAAG-TCACCCGAGTTGGTGGTAATCTTTTT
65 AAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
** * * * *
161643 AAAGTCCACACGTGTTGGTGGC-A-CTATAGTC-AAAGTCCACATGAGTTAGTGG-AAGCCTTTT
1 AAAGTCCACACAAGTTGGTGGCAACCT-T-TTCAAAAGCCCACACGAGTTGGTGGCAA-CCTTTT
* * *** * * * * * *
161704 CAAAAGTCCATAGGAATTGGTAATAACCTTTTC-AAAGTCTACACGAGTTTGTGGCAAACTTTCC
63 CAAAA-TCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * ** * * * * *
161768 AACGTCTATACGAGTTGGTGGC-ACCATAGTC-AAAGTCCAAATGAGTTGGGGGCAACCTTTTTA
1 AAAGTCCACACAAGTTGGTGGCAACC-TTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
** * ** * * * * * *
161831 GAAGCCCACATAAATTGGTGGTAACATTTTCAAAA-TCC-CAC-A-----TG-C-A--TTGTTA
65 -AAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTT-TTC
* * ** * * * * * * * *
161883 AAACTCTACATGAGTTGGTGACAACCGTTTC-AAAGTCTACACAAGCTGTTGGAAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* * ** *
161947 AAGCCCATACGAGTTGGTGGCAACCTTTTCAAAATTCCACACGAGTTGGTGGCAACC-TTTC
66 AA-TCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * * * * * * *
162008 AAAATCCCACACAAGTTGGTAGCAGCATTTTTAAAAGCCTACACTAGTTAGTGGTAAGCTTTGCA
1 AAAGT-CCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* * * * * * * * ** *
162073 AATGTCCACACGAGTTGGTGGCAAACTTTT-GAAAGCCCAAACAAGTTGTTGGTAACCTTTTTA
65 AA-ATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACC-TTTTC
* * ** * * ** *
162136 AAAGCCCATAGGAGTTGGTGGCAGCATTTTCAAAAATCCACACAAGTTGGTGGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-A
* * * * * * * * * ** * *
162201 AAATCCACATGAATTAGTGGTAACCATTTC-AAAGTCCACATGAGTTAATGGCAACC-GTTC
65 AAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * *
162261 AAAAGTCCATA-AGAGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACACAAGTAGGTAGTA
1 -AAAGTCCACACA-AGTTGGTGGCAACCTTTT--------CAAAAGCCCACACGAGTTGGTGGCA
* * * * * * ***** ** * *
162325 ACCATTTCAAAGTCCACACAAGTTGAT-GGATACCTTTTCAAAAGTTTGTAAAAATTGGTGGCAA
56 ACCTTTTCAAAATCCATACGAGTTGGTCGCA-ACCTTTTCAAAAGCCCACACGAGTTGGTGACAA
162389 CCTTTTC
120 CCTTTTC
* ** ** * * * * *
162396 AAAAGCCCACATGAGTTGGTGATAACCTTTTC-AAAGTCTACACAAGTTGTTAGCAACCTTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* * * * * * * *
162460 AAAGCCCACACGTGTTGGTGGCAACGTTTTCAAAATCCTACACGAGTTGGTGGCAACCTTTTC
65 AAA-TCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * ** * * *
162523 AAAATCTGACACAAGTTGGTAGTAACCTTTTTGAAACCCCACA-GAGTTGGTGGTAACCATTTCA
1 AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC-
* * * * * * * * *
162587 AAAATCCACATGTGTTGGTAGCAACCTTTTTAAAAGCCTACATGAGTTTGTGGCAACCTTTTC
64 AAAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
** * * * * * * * * * *
162650 AAAGTTTACACGAGTTTGTGG-TACCATATCCAAAGTCCACACGAG-T--TGGCAACATTTTTAG
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* * * * * * * * ** * * **
162711 AAGCC-CACGTAAGGTGGTGGGAACCTTTTC-AAAGTCTATAAAAGTTGGTGGCAACATAGTC
66 AATCCATACG--AGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* ** * ** * * *
162772 AAAGTCAACATGAGTTGGTGGCAACATTTTCAAAA-CCGCACATAAGTTGATGGCCACTTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCC-CACACGAGTTGGTGGCAACCTTTTCA
* * * * * * * * * * *
162836 AAAGCCCACACAAGCTAGTGGCAGCCTTTTTTAAAA-CCCACACGAGTTGATGGCAACCTTCTC
65 AAA-TCCATACGAGTTGGTCGCAACC-TTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
*** * * **
162899 AAAGTCCACGTGAGTTGGTTGCAACATTTTCAAAAGCCCAAAAGTCCACACGAGTTGGTGATAAC
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAG--C------CCACACGAGTTGGTGGCAAC
* ** * *
162964 CTTTTCAAAAGCCCCGCACGAGTTGGT-GACAACCTTTTCAAAAGCCTATGA-GAGTTGGTCG-C
58 CTTTTCAAAA--TCCATACGAGTTGGTCG-CAACCTTTTCAAAAGCCCA-CACGAGTTGGT-GAC
*
163026 TACCTTTTC
118 AACCTTTTC
* * ** * * * * *
163035 AAAAGCCCACACGAGTTGGTGATAACTTTTTC-AAAGTCAACACAAGTTGTTGGCAACCTTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* * * * * * * *
163099 AAAGCCCACACGAGTTGATGGCAACCTTTTCAAAATCGCACACGAGTTGG-CAGCAACTTTTTC
65 AAA-TCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGA-CAACCTTTTC
* * ** * ** * * *
163162 AAAAATCCACA-GAGTTGGTAACAACCTTTTCAAAA-TCCACATAAGTTGTTGGTAACATTTTCA
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* * * * * * * * * *
163225 AAAGCCTATATGAGTTGGTGGTAACCTTTTCAAAATCCCAAATGCGTTGGTGGCAAACTTTTC
65 AAATCC-ATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * *
163288 AAAATCC-CACATGAGTAGGTGACAACCTTTTC-AAAGTCCACAC-ATGTTGTTAGCAACCTTTT
1 AAAGTCCACACA--AGTTGGTGGCAACCTTTTCAAAAGCCCACACGA-GTTGGTGGCAACCTTTT
* * * * * * * *
163350 CAAAATCCCACACGAGTTGGTGGCAGCCTTTTTAAAATCCCACACAAGTTGGTGACAACTTTTTT
63 CAAAAT-CCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * *
163415 AGAGTCCACACAAGTTGTTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTAGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* * * * * * *
163480 AATCCCATAAGAGTTGATGGCAACCTTTTCAAAATCTCGCACGACTTGGT-AGCAACCTTTTC
66 AAT-CCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGA-CAACCTTTTC
* * * * * * * *
163542 AAAAGCCCACACAAGTTGGTGGCAACCTTTGCGAAAGTCTATACAAGTTGGTGGCAACCTTCTC-
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* * * * * * *
163606 AAAGCC-TACAAGAATTGGTGGCAACCTTTTCAAAAGCCCGCACAAATTGGTGATAACCTTTTC
65 AAATCCATAC--GAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* ** * * *
163669 AAAGCCCACATTAGTTGGTGGCAACCGTTTCAAAAGCCCACACG-GTTTGGTGGTATCCTTTTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAG-TTGGTGGCAACCTTTTCA
* * * * * ** * * *
163733 AAGTCTACACGAGTTGATGGCAATATTTTTAAAAGCCCACACGAGTTGATGGCAACCTTTTC
65 AAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * *
163795 AAAATCTACACGAGTTGATGGCAA-C--TT-----------ACGAGTTAGTGGCAACCTTTTCAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* * * * * * *
163846 AGTCCAT--GAGTTGGTGGC-ACCGTAGTT--AAAGTCCACACGAGTTGGTGGCTACTTTTTC
66 AATCCATACGAGTTGGTCGCAACC-T-TTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * * * * *
163904 AAAAGCCCATACAAGTTAGTGGTAACATATTT-AAAA-TCCACACGAGTTCGTGGCAATCTTTTT
1 -AAAGTCCACACAAGTTGGTGGCAACCT-TTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC
* * * * * ** * * * *
163967 AAAGTTCACACGAGTTGGTGGC-A-C----C-ATAGTTCACATGAGTTAGTGGCAGCCTTTTC
64 AAAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * ** * * * *
164023 AAAAGCCCACACGAGTTGGTGACAACATTTTC-AAAGTTCATAAGAGTAGGTGGTAACCTTTT-A
1 -AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCA
* * * *** * * ** *
164086 AAGTCCACACGAGTTGGTGGC-ACCACAGTC-AAAGTCCACACAAGTTGGTGGTAACTTTTTC
65 AAATCCATACGAGTTGGTCGCAACC-TTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * * *
164147 AAAAG-CTCGCACAAGTCGGTGCCAACATTTTC-AAAG-CTAGACGAGTTGGTGACAACCTTTTC
1 -AAAGTC-CACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTC
* * * * * **
164209 AAAGTCCACACGAGTTGGTGGTAACCTTTTC-AAAGTCCACACGAGTTGGTGGTAACCTTTTC
64 AAAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * * * * * **
164271 AAAGTCTACACGAGTTGGTGGCAACCCTTTC-AAAGTCCACATGAGTTGGTGGTAGCAC-AGTCA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAAC-CTTTTCA
* * * ** * * * **
164334 AAGTCCATACAAGTTGGTGGCAATATTTTCAAAAACCCACATGAGTTAGTGGTAACCTTTTC
65 AAATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
* * * ** * *
164396 AAAGTCCACATAAGTTGGTGGCATCATAGTC-AAAGTCCACACGAGTTGGTGGCAACCTTTACAA
1 AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
* *
164460 AAGCTCACACGAGTTGGT
66 AATC-CATACGAGTTGGT
164478 GGTAACTTTT
Statistics
Matches: 2829, Mismatches: 686, Indels: 365
0.73 0.18 0.09
Matches are distributed among these distances:
107 11 0.00
108 2 0.00
109 28 0.01
110 29 0.01
111 65 0.02
112 31 0.01
113 1 0.00
114 6 0.00
115 68 0.02
116 7 0.00
117 5 0.00
118 34 0.01
119 138 0.05
121 3 0.00
122 48 0.02
123 114 0.04
124 181 0.06
125 360 0.13
126 446 0.16
127 943 0.33
128 119 0.04
130 1 0.00
132 2 0.00
133 20 0.01
134 44 0.02
135 59 0.02
136 38 0.01
137 26 0.01
ACGTcount: A:0.31, C:0.22, G:0.20, T:0.28
Consensus pattern (126 bp):
AAAGTCCACACAAGTTGGTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTGGCAACCTTTTCAA
AATCCATACGAGTTGGTCGCAACCTTTTCAAAAGCCCACACGAGTTGGTGACAACCTTTTC
Found at i:161055 original size:95 final size:94
Alignment explanation
Indices: 160654--164488 Score: 763
Period size: 95 Copynumber: 41.0 Consensus size: 94
160644 TAAAAGCCAA
* * * **
160654 AAAGTCCACACGAGTTGGT-GATAACCTTTTTAAAAGCCCGCATGAGTTGGTGGCAACCTTTTCA
1 AAAGTCCACAC-AGTTGGTAG-CAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * * *
160718 AAAGT-CTATGA-GAGTTGGTCGCAACCTTTTC
64 AAA-TCCCA-CACGAGTAGGTGGCAACCTTTTC
* * * * * **
160749 AAAAGCCCACACGAATTGGT-GATAACTTTTTCAAAGT--CAACACAAGTTGGTGGCAACCTTTT
1 -AAAGTCCACAC-AGTTGGTAG-CAACCTTTTCAAAATCCCAA-ATGAGTTGGTGGCAACCTTTT
* * ** * * *
160811 TAAAAGCAAACACGAGTTGATGGAAACCTTTTC
62 CAAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * *** **
160844 AAAATCGCATACGAGTTGGCAGCAACTTTTTCAAAA-CCTGCA-GAGTTGGTAACAACCTTTTCA
1 AAAGTC-CACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * * * * *
160907 AAGT-CCACACAAGTTGTTGGTAACGTTTTC
64 AAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * *
160937 AAAAG-CCTACATGAGTTGGTAGCAACCTTTTCAAAATCCCAAATGCGTTGGTGGCAAACATTTC
1 -AAAGTCC-ACA-CAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTC
* *
161001 AAAATCCCACACGAGTAGGTGACAACATTTTC
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * *
161033 AAAGTCCACACATGTTGTTAGCAACTTTTTCAAAATCCCACACGAGTTGGTGGTAGCCTTTTTAA
1 AAAGTCCACACA-GTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAA
* *
161098 AATCCCACACAAATTA-GTGGCAACCTTTGT-
65 AATCCCACAC-GAGTAGGTGGCAACCTTT-TC
* * * * * *
161128 AAAGTCAACACAAGTTGTTGGCAACCTTTTCAGAAGCCCACACT-AGTTGGTGGCAACCTTTTCA
1 AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCA-AATGAGTTGGTGGCAACCTTTTCA
* * *
161192 AAATCCCACATGAGTTGGTGGCAACCTTTGC
64 AAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * **
161223 AAAAGTCCATACGAGTTGGTCGCAACCTTTTC-AAAGCCCAAACGAGTTATTGGCAACCTTTTCA
1 -AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * * * * **
161287 ATAGCCTACAGGAATTTGTGGCAACCTTTTC
64 AAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * ** * *
161318 AAAAGCCCACACGAATTGGTGGTAACCTTTTC-AAAGCTCACTTGATTTGGTGGCAACCGTTTCA
1 -AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * * *
161382 AAAGCCTACAC-ATGTTGGTGGTAACCTTTTC
64 AAATCCCACACGA-GTAGGTGGCAACCTTTTC
* ** * * * * *
161413 AAAGTCTACACGAGTTGGT-GCAATATTTTAAAAAGCCCACACGAGTTTGTGGC-ACACTTTTCA
1 AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAAC-CTTTTCA
* *
161476 AAAT-CCACACGAGTTGGTGGCAA-C-TTAC
64 AAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * *
161504 -GAGT-----TAG-TGGT---AACCTTTTTAAAGT-CCACATGAGTTAGTGGC-ACCATTGTCAA
1 AAAGTCCACACAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACC-TTTTCAA
* * * * *
161557 AGT-CCACACGAGTTGGTGGTAGCTTTTTC
65 AATCCCACACGAGTAGGTGGCAACCTTTTC
** * * * * * * * *
161586 AAA--AAACA-AGTTAGTCGTAACCTTTTCAAAGTCACC---CGAGTTGGTGGTAATCTTTTTAA
1 AAAGTCCACACAGTTGGTAGCAACCTTTTCAAAATC-CCAAATGAGTTGGTGGCAACCTTTTCAA
* * * *
161645 AGT-CCACACGTGTTGGTGGC-A-CTATAGTC
65 AATCCCACACGAGTAGGTGGCAACCT-T-TTC
* * * * * * ***
161674 AAAGTCCACATGAGTTAGT-GGAAGCCTTTTCAAAAGT-CCATAGGAATTGGTAATAACCTTTTC
1 AAAGTCCACA-CAGTTGGTAGCAA-CCTTTTCAAAA-TCCCAAATGAGTTGGTGGCAACCTTTTC
* * ** * *
161737 AAAGT-CTACACGAGTTTGTGGCAAACTTTCC
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * ** * * *
161768 AACGTCTATACGAGTTGGTGGC-ACCATAGTCAAAGT-CCAAATGAGTTGGGGGCAACCTTTTTA
1 AAAGTCCACAC-AGTTGGTAGCAACC-TTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * ** * * * *
161831 GAAGCCCACATAAATTGGTGGTAACATTTTC
64 AAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * *
161862 AAAATCC-CACA-----T-GC-A--TTGTT-AAAA-CTCTACATGAGTTGGTGACAACCGTTTCA
1 AAAGTCCACACAGTTGGTAGCAACCTT-TTCAAAATC-CCAAATGAGTTGGTGGCAACCTTTTCA
* * * * *
161915 AAGT-CTACACAAGCT-GTTGGAAACCTTTTC
64 AAATCCCACACGAG-TAGGTGGCAACCTTTTC
* * * * * *
161945 AAAAGCCCATACGAGTTGGTGGCAACCTTTTCAAAATTCCACACGAGTTGGTGGCAACC-TTTCA
1 -AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * * * * *
162009 AAATCCCACACAAGTTGGTAGCAGCATTTTTA
64 AAATCCCACACGAGTAGGTGGCAAC-CTTTTC
* * * * * * * * *
162041 AAAG-CCTACACTAGTTAGTGGTAAGCTTTGC-AAATGTCCACACGAGTTGGTGGCAAACTTTT-
1 AAAGTCC-ACAC-AGTTGGTAGCAACCTTTTCAAAAT-CCCAAATGAGTTGGTGGCAACCTTTTC
* * * * * * * *
162103 GAAAGCCCAAACAAGTTGTTGGTAACCTTTTTA
63 AAAATCCCACACGAGTAGGTGGCAACC-TTTTC
* * * * * * *
162136 AAAGCCCATAGGAGTTGGTGGCAGCATTTTCAAAAATCCACACA--AGTTGGTGGCAACCTTTTC
1 AAAGTCCACA-CAGTTGGTAGCAACCTTTTC-AAAATCC-CAAATGAGTTGGTGGCAACCTTTTC
* * * *
162199 AAAAAT-CCACATGAATTA-GTGGTAACCATTTC
63 -AAAATCCCACACG-AGTAGGTGGCAACCTTTTC
* ** * * *
162231 AAAGTCCACATGAGTTAATGGCAACC-GTTCAAAAGT-CCATAA-GAGTTGGTGTCAACCTTTTC
1 AAAGTCCACA-CAGTTGGTAGCAACCTTTTCAAAA-TCCCA-AATGAGTTGGTGGCAACCTTTT-
* * * * *
162293 AAAAGCCCAAAAGCCCACACAAGTAGGTAGTAACCATTTC
62 -------CAAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * *** *
162333 AAAGTCCACACAAGTTGAT-GGATACCTTTTCAAAAGTTTGTAAA--AATTGGTGGCAACCTTTT
1 AAAGTCCACAC-AGTTGGTAGCA-ACCTTTTCAAAA--TCCCAAATGAGTTGGTGGCAACCTTTT
* * * **
162395 CAAAAGCCCACATGAGTTGGTGATAACCTTTTC
62 CAAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * *
162428 AAAGTCTACACAAGTTGTTAGCAACCTTTTCAAAAGCCCACACGTGTTGGTGGCAACGTTTTCAA
1 AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAA
* *
162493 AATCCTACACGAGTTGGTGGCAACCTTTTC
65 AATCCCACACGAGTAGGTGGCAACCTTTTC
* * * ** * * * *
162523 AAAATCTGACACAAGTTGGTAGTAACCTTTTTGAAACCCCACA-GAGTTGGTGGTAACCATTTCA
1 AAAGTC-CACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTC-
* * * * *
162587 AAAAT-CCACATGTGTTGGTAGCAACCTTTTTA
63 AAAATCCCACACGAGTAGGTGGCAACC-TTTTC
* * * * ** * * * * * *
162619 AAAG-CCTACATGAGTTTGTGGCAACCTTTTCAAAGT-TTACACGAGTTTGTGG-TACCATATCC
1 AAAGTCC-ACA-CAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACC-TTTTC
* * *
162681 AAAGT-CCACACGAGT---TGGCAACATTTTT
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * * * **
162709 AGAAGCCCACGTA-AGGTGGTGGGAACCTTTTCAAAGT-CTATAA-AAGTTGGTGGCAACATAGT
1 A-AAGTCCAC--ACAGTTGGTAGCAACCTTTTCAAAATCCCA-AATGAGTTGGTGGCAACCTTTT
* * * * *
162771 CAAAGT-CAACATGAGTTGGTGGCAACATTTTC
62 CAAAATCCCACACGAGTAGGTGGCAACCTTTTC
** * * * * * * * ** * * * *
162803 AAAACCGCACATAAGTTGATGGCCACTTTTTCAAAAGCCCACACAAGCTAGTGGCAGCCTTTTTT
1 AAAGTC-CACA-CAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACC-TTTTC
* * *
162868 AAAA-CCCACACGAGTTGATGGCAACCTTCTC
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
** * * * **
162899 AAAGTCCACGTGAGTTGGTTGCAACATTTTCAAAAGCCCAAAAGTCCACACGAGTTGGTGATAAC
1 AAAGTCCAC-ACAGTTGGTAGCAACCTTTTCAAAATCCC-AAA-T------GAGTTGGTGGCAAC
* * * *
162964 CTTTTCAAAAGCCCCGCACGAGTTGGTGACAACCTTTTC
57 CTTTTCAAAA-TCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * * ** *
163003 AAAAG-CCTATGAGAGTTGGTCGCTACCTTTTCAAAAGCCCACACGAGTTGGTGATAACTTTTTC
1 -AAAGTCC-A-CACAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTC
* * * * *
163067 AAAGT-CAACACAAGTTGTTGGCAACCTTTTC
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * ** *
163098 AAAAGCCCACACGAGTTGATGGCAACCTTTTCAAAATCGCACACGAGTTGGCAGCAACTTTTTCA
1 -AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTC-
* **
163163 AAAAT-CCACA-GAGTTGGTAACAACCTTTTC
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * * * * *
163193 AAAATCCACATAAGTTGTTGGTAACATTTTCAAAAGCCTATATGAGTTGGTGGTAACCTTTTCAA
1 AAAGTCCACA-CAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAA
* * * * *
163258 AATCCCAAATGCGTTGGTGGCAAACTTTTC
65 AATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * *
163288 AAAATCCCACATGAGTAGGT-GACAACCTTTTCAAAGTCCACACAT--GTTGTTAGCAACCTTTT
1 AAAGT-CCACA-CAGTTGGTAG-CAACCTTTTCAAAATCC-CAAATGAGTTGGTGGCAACCTTTT
* * *
163350 CAAAATCCCACACGAGTTGGTGGCAGCCTTTTT
62 CAAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * *
163383 AAAATCCCACACAAGTTGGT-GACAACTTTTTTAGAGTCCACACA--AGTTGTTGGCAACCTTTT
1 AAAGT-CCACAC-AGTTGGTAG-CAACCTTTTCAAAATCC-CAAATGAGTTGGTGGCAACCTTTT
* * *
163445 CAAAAGCCCACACGAGTTGGTAGCAACCTTTTC
62 CAAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * ** * * *
163478 AAAATCCCATAAGAGTTGATGGCAACCTTTTCAAAATCTCGCACGACTTGGTAGCAACCTTTTCA
1 AAAGT-CCA-CACAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * * *
163543 AAAGCCCACACAAGTTGGTGGCAACCTTTGC
64 AAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * *
163574 GAAAGTCTATACAAGTTGGTGGCAACCTTCTC-AAAGCCTACAA-GAATTGGTGGCAACCTTTTC
1 -AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCA-AATGAGTTGGTGGCAACCTTTTC
* * * * * **
163637 AAAAGCCCGCACAAATTGGTGATAACCTTTTC
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * * * * *
163669 AAAGCCCACATTAGTTGGTGGCAACCGTTTCAAAAGCCCACACG-GTTTGGTGGTATCCTTTTCA
1 AAAGTCCACA-CAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAG-TTGGTGGCAACCTTTTCA
* * * * ** *
163733 AAGT-CTACACGAGTTGATGGCAATATTTTTA
64 AAATCCCACACGAGTAGGTGGCAA-CCTTTTC
* * * * * * *
163764 AAAGCCCACACGAGTTGATGGCAACCTTTTCAAAAT-CTACACGAGTTGATGGCAA-C---T---
1 AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAA
163821 --T-----ACGAGTTA-GTGGCAACCTTTTC
65 AATCCCACACGAG-TAGGTGGCAACCTTTTC
** * * * * * * *
163844 AAAGTCCA-TGAGTTGGTGGC-ACCGTAGTT-AAAGT-CCACACGAGTTGGTGGCTACTTTTTCA
1 AAAGTCCACACAGTTGGTAGCAACC-T-TTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * * * *
163905 AAAGCCCATACAAGTTA-GTGGTAACATATTT-
64 AAATCCCACACGAG-TAGGTGGCAACCT-TTTC
* * * * * * * * * *
163936 AAAATCCACACGAGTTCGTGGCAATCTTTTTAAAGT-TCACACGAGTTGGTGGC-A-C----CAT
1 AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAA
* * * *
163994 AGT-TCACATGAGTTA-GTGGCAGCCTTTTC
65 AATCCCACACGAG-TAGGTGGCAACCTTTTC
* * * * * *
164023 AAAAGCCCACACGAGTTGGT-GACAACATTTTCAAAGT-TCATAA-GAGTAGGTGGTAACCTTTT
1 -AAAGTCCACAC-AGTTGGTAG-CAACCTTTTCAAAATCCCA-AATGAGTTGGTGGCAACCTTTT
* * ***
164085 -AAAGT-CCACACGAGTTGGTGGC-ACCACAGTC
62 CAAAATCCCACACGAGTAGGTGGCAACC-TTTTC
* * * * * * * *
164116 AAAGTCCACACAAGTTGGTGGTAACTTTTTCAAAAGCTCGCACA--AGTCGGTGCCAACATTTTC
1 AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAA--TCCCAAATGAGTTGGTGGCAACCTTTTC
* * * * *
164179 -AAA-GCTAGACGAGTTGGTGACAACCTTTTC
63 AAAATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * * *
164209 AAAGTCCACACGAGTTGGTGGTAACCTTTTCAAAGT-CCACACGAGTTGGTGGTAACCTTTTCAA
1 AAAGTCCACAC-AGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAA
* * * *
164273 AGT-CTACACGAGTTGGTGGCAACCCTTTC
65 AATCCCACACGAGTAGGTGGCAACCTTTTC
* * * * ** * * ** **
164302 AAAGTCCACATGAGTTGGTGGTAGCAC-AGTCAAAGT-CCATACAAGTTGGTGGCAATATTTTCA
1 AAAGTCCACA-CAGTTGGTAGCAAC-CTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCA
* * *
164365 AAAACCCACATGAGTTA-GTGGTAACCTTTTC
64 AAATCCCACACGAG-TAGGTGGCAACCTTTTC
* * * * ** * * * *
164396 AAAGTCCACATAAGTTGGTGGCATCATAGTCAAAGT-CCACACGAGTTGGTGGCAACCTTTACAA
1 AAAGTCCACA-CAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAA
* * * * *
164460 AAGCTCACACGAGTTGGTGGTAACTTTTT
65 AATCCCACACGAGTAGGTGGCAACCTTTT
164489 TAAAAGTCTA
Statistics
Matches: 2823, Mismatches: 689, Indels: 456
0.71 0.17 0.11
Matches are distributed among these distances:
77 3 0.00
78 30 0.01
79 3 0.00
80 53 0.02
81 20 0.01
82 5 0.00
83 27 0.01
84 31 0.01
85 5 0.00
86 11 0.00
87 18 0.01
88 80 0.03
89 17 0.01
90 17 0.01
91 70 0.02
92 98 0.03
93 282 0.10
94 482 0.17
95 1096 0.39
96 285 0.10
97 42 0.01
101 9 0.00
102 46 0.02
103 32 0.01
104 30 0.01
105 31 0.01
ACGTcount: A:0.31, C:0.22, G:0.20, T:0.28
Consensus pattern (94 bp):
AAAGTCCACACAGTTGGTAGCAACCTTTTCAAAATCCCAAATGAGTTGGTGGCAACCTTTTCAAA
ATCCCACACGAGTAGGTGGCAACCTTTTC
Found at i:161647 original size:30 final size:31
Alignment explanation
Indices: 161502--163811 Score: 832
Period size: 32 Copynumber: 73.3 Consensus size: 31
161492 GTGGCAACTT
* *
161502 ACGAGTTAGTGGTAACCTTTTTAAAGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * *
161533 ATGAGTTAGTGG-CACCATTGTCAAAGTCCAC
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCCAC
* * *
161564 ACGAGTTGGTGGTAGCTTTTTCAAA----AA
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * *
161591 ACAAGTTAGTCGTAACCTTTTCAAAGT-CAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * *
161621 CCGAGTTGGTGGTAATCTTTTTAAAGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * *
161652 ACGTGTTGGTGG-CA-CTATAGTCAAAGTCCAC
1 ACGAGTTGGTGGTAACCT-T-TTCAAAGTCCAC
* * *
161683 ATGAGTTAGTGG-AAGCCTTTTCAAAAGTCCAT
1 ACGAGTTGGTGGTAA-CCTTTTC-AAAGTCCAC
* * ** *
161715 AGGAATTGGTAATAACCTTTTCAAAGTCTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * * * * *
161746 ACGAGTTTGTGGCAAACTTTCCAACGTCTAT
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* ** *
161777 ACGAGTTGGTGG-CACCATAGTCAAAGTCCAA
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCCAC
* * * * *
161808 ATGAGTTGGGGGCAACCTTTTTAGAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTCA-AAGTCCAC
** * * *
161840 ATAAATTGGTGGTAACATTTTCAAAATCC-C
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * * * *
161870 AC-A-----T-G-CA-TTGTTAAAACTCTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* ** * *
161892 ATGAGTTGGTGACAACCGTTTCAAAGTCTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * * * *
161923 ACAAGCTGTTGGAAACCTTTTCAAAAGCCCAT
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* *
161955 ACGAGTTGGTGGCAACCTTTTCAAAATTCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* *
161987 ACGAGTTGGTGGCAACC-TTTCAAAATCCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGT-CCAC
* * * * * *
162018 ACAAGTTGGTAGCAGCATTTTTAAAAG-CCTAC
1 ACGAGTTGGTGGTAAC-CTTTTCAAAGTCC-AC
* * * *
162050 ACTAGTTAGTGGTAAGCTTTGCAAATGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAA-GTCCAC
* * * * *
162082 ACGAGTTGGTGGCAAACTTTTGAAAGCCCAA
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * * *
162113 ACAAGTTGTTGGTAACCTTTTTAAAAGCCCAT
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCCAC
* * * * *
162145 AGGAGTTGGTGGCAGCATTTTCAAAAATCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * *
162177 ACAAGTTGGTGGCAACCTTTTCAAAAATCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * * *
162209 ATGAATTAGTGGTAACCATTTCAAAGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* ** * * *
162240 ATGAGTTAATGGCAACC-GTTCAAAAGTCCAT
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* *
162271 AAGAGTTGGT-GTCAACCTTTTCAAAAGCCCAAAAGCCCAC
1 ACGAGTTGGTGGT-AACCTTTT--------C-AAAGTCCAC
* * * *
162311 ACAAGTAGGTAGTAACCATTTCAAAGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * ****
162342 ACAAGTTGATGG-ATACCTTTTCAAAAGTTTGT
1 ACGAGTTGGTGGTA-ACCTTTTC-AAAGTCCAC
** * * *
162374 AAAAATTGGTGGCAACCTTTTCAAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * *
162406 ATGAGTTGGTGATAACCTTTTCAAAGTCTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * * *
162437 ACAAGTTGTTAGCAACCTTTTCAAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * * *
162469 ACGTGTTGGTGGCAACGTTTTCAAAATCCTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCC-AC
* * *
162501 ACGAGTTGGTGGCAACCTTTTCAAAATCTGAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTC-CAC
* * * **
162533 ACAAGTTGGTAGTAACCTTTTTGAAACCCCAC
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCCAC
* *
162565 A-GAGTTGGTGGTAACCATTTCAAAAATCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * * * *
162596 ATGTGTTGGTAGCAACCTTTTTAAAAG-CCTAC
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCC-AC
* * * **
162628 ATGAGTTTGTGGCAACCTTTTCAAAGTTTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * *
162659 ACGAGTTTGTGGT-ACCATATCCAAAGTCCAC
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCCAC
* * *
162690 ACGAG-T--TGGCAACATTTTTAGAAG-CC-C
1 ACGAGTTGGTGGTAACCTTTTCA-AAGTCCAC
* * * *
162717 ACGTAAGGTGGTGGGAACCTTTTCAAAGTCTAT
1 ACG--AGTTGGTGGTAACCTTTTCAAAGTCCAC
** * * ** *
162750 AAAAGTTGGTGGCAACATAGTCAAAGTCAAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * **
162781 ATGAGTTGGTGGCAACATTTTCAAAACCGCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTC-CAC
** * ** * *
162813 ATAAGTTGATGGCCACTTTTTCAAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * * * * * **
162845 ACAAGCTAGTGGCAGCCTTTTTTAAAACCCAC
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCCAC
* * *
162877 ACGAGTTGATGGCAACCTTCTCAAAGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
** * * *
162908 GTGAGTTGGTTGCAACATTTTCAAAAGCCCAAAAGTCCAC
1 ACGAGTTGGTGGTAACCTTTT--------C-AAAGTCCAC
* * *
162948 ACGAGTTGGTGATAACCTTTTCAAAAGCCCCGC
1 ACGAGTTGGTGGTAACCTTTTC-AAAG-TCCAC
** *
162981 ACGAGTTGGTGACAACCTTTTCAAAAG-CCTATG
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCC-A-C
* *
163014 A-GAGTTGGTCGCT-ACCTTTTCAAAAGCCCAC
1 ACGAGTTGGT-GGTAACCTTTTC-AAAGTCCAC
* * *
163045 ACGAGTTGGTGATAACTTTTTCAAAGTCAAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * *
163076 ACAAGTTGTTGGCAACCTTTTCAAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * *
163108 ACGAGTTGATGGCAACCTTTTCAAAATCGCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTC-CAC
** * * *
163140 ACGAGTTGGCAGCAACTTTTTCAAAAATCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
*** *
163172 A-GAGTTGGTAACAACCTTTTCAAAATCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
** * * *
163202 ATAAGTTGTTGGTAACATTTTCAAAAG-CCTAT
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCC-AC
* * *
163234 ATGAGTTGGTGGTAACCTTTTCAAAATCCCAA
1 ACGAGTTGGTGGTAACCTTTTCAAAGT-CCAC
* * * * *
163266 ATGCGTTGGTGGCAAACTTTTCAAAATCCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGT-CCAC
* * **
163298 ATGAGTAGGTGACAACCTTTTCAAAGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * *
163329 AC-ATGTTGTTAGCAACCTTTTCAAAATCCCAC
1 ACGA-GTTGGTGGTAACCTTTTCAAAGT-CCAC
* * * *
163361 ACGAGTTGGTGGCAGCCTTTTTAAAATCCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGT-CCAC
* ** * * *
163393 ACAAGTTGGTGACAACTTTTTTAGAGTCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
* * * *
163424 ACAAGTTGTTGGCAACCTTTTCAAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * * *
163456 ACGAGTTGGTAGCAACCTTTTCAAAATCCCAT
1 ACGAGTTGGTGGTAACCTTTTCAAAGT-CCAC
* * * * *
163488 AAGAGTTGATGGCAACCTTTTCAAAATCTCGC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTC-CAC
* * * *
163520 ACGACTTGGTAGCAACCTTTTCAAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * * * *
163552 ACAAGTTGGTGGCAACCTTTGCGAAAGTCTAT
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * *
163584 ACAAGTTGGTGGCAACCTTCTCAAAG-CCTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCC-AC
* * * * *
163615 AAGAATTGGTGGCAACCTTTTCAAAAGCCCGC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* * * *
163647 ACAAATTGGTGATAACCTTTTCAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
** * * *
163678 ATTAGTTGGTGGCAACCGTTTCAAAAGCCCAC
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCAC
* *
163710 ACG-GTTTGGTGGTATCCTTTTCAAAGTCTAC
1 ACGAG-TTGGTGGTAACCTTTTCAAAGTCCAC
* * ** * *
163741 ACGAGTTGATGGCAATATTTTTAAAAGCCCAC
1 ACGAGTTGGTGGTAA-CCTTTTCAAAGTCCAC
* * * *
163773 ACGAGTTGATGGCAACCTTTTCAAAATCTAC
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
163804 ACGAGTTG
1 ACGAGTTG
163812 ATGGCAACTT
Statistics
Matches: 1720, Mismatches: 450, Indels: 218
0.72 0.19 0.09
Matches are distributed among these distances:
21 8 0.00
22 3 0.00
23 2 0.00
24 1 0.00
27 25 0.01
28 9 0.01
29 10 0.01
30 61 0.04
31 638 0.37
32 831 0.48
33 82 0.05
39 1 0.00
40 47 0.03
41 2 0.00
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (31 bp):
ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
Found at i:161802 original size:125 final size:119
Alignment explanation
Indices: 161524--161814 Score: 312
Period size: 125 Copynumber: 2.4 Consensus size: 119
161514 TAACCTTTTT
* * * * * * *
161524 AAAGTCCACATGAGTTAGTGGCACCATTGTCAAAGTCCACACGAGTTGGTGGTAGCTTTTTCAAA
1 AAAGTCCACACGAGTTGGTGGCACCATAGTCAAAGTCCACATGAGTTAGTGGAAGCCTTTTCAAA
** * * * **
161589 AAACAAGTTAGTCGTAACCTTTTCAAAGTCACCCGAGTTGGTGGTAATCTTTTT
66 AAACAAGTTAGTAATAACCTTTTCAAAGTCACACGAGTTGGTGGCAAACTTTCC
* *
161643 AAAGTCCACACGTGTTGGTGGCACTATAGTCAAAGTCCACATGAGTTAGTGGAAGCCTTTTCAAA
1 AAAGTCCACACGAGTTGGTGGCACCATAGTCAAAGTCCACATGAGTTAGTGGAAGCCTTTTCAAA
** * *
161708 AGTCCATAGGAATTGGTAATAACCTTTTCAAAGTCTACACGAGTTTGTGGCAAACTTTCC
66 A-AACA-A-G--TTAGTAATAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAAACTTTCC
* * * *
161768 AACGTCTATACGAGTTGGTGGCACCATAGTCAAAGTCCAAATGAGTT
1 AAAGTCCACACGAGTTGGTGGCACCATAGTCAAAGTCCACATGAGTT
161815 GGGGGCAACC
Statistics
Matches: 140, Mismatches: 26, Indels: 6
0.81 0.15 0.03
Matches are distributed among these distances:
119 57 0.41
120 2 0.01
121 1 0.01
122 1 0.01
124 20 0.14
125 59 0.42
ACGTcount: A:0.30, C:0.20, G:0.21, T:0.29
Consensus pattern (119 bp):
AAAGTCCACACGAGTTGGTGGCACCATAGTCAAAGTCCACATGAGTTAGTGGAAGCCTTTTCAAA
AAACAAGTTAGTAATAACCTTTTCAAAGTCACACGAGTTGGTGGCAAACTTTCC
Found at i:161847 original size:125 final size:124
Alignment explanation
Indices: 161603--161864 Score: 292
Period size: 125 Copynumber: 2.1 Consensus size: 124
161593 AAGTTAGTCG
* * * ** * *
161603 TAACCTTTTCAAAGTCACCCGAGTTGGTGGTAATCTTTTTAAAGTCCACACGTGTTGGTGGCACT
1 TAACCTTTTCAAAGTCACACGAGTTGGTGGCAAACTTTCCAAAGTCCACACGAGTTGGTGGCACC
* * * * *
161668 ATAGTCAAAGTCCACATGAGTTAGTGGAAGCCTTTTCAAAAGTCCATAGGAATTGGTAA
66 ATAGTCAAAGTCCAAATGAGTTAGGGGAAGCCTTTTCAAAAGCCCACAGAAATTGGTAA
* * * *
161727 TAACCTTTTCAAAGTCTACACGAGTTTGTGGCAAACTTTCCAACGTCTATACGAGTTGGTGGCAC
1 TAACCTTTTCAAAGTC-ACACGAGTTGGTGGCAAACTTTCCAAAGTCCACACGAGTTGGTGGCAC
* * * * **
161792 CATAGTCAAAGTCCAAATGAGTTGGGGGCAA-CCTTTTTAGAAGCCCACATAAATTGGTGG
65 CATAGTCAAAGTCCAAATGAGTTAGGGG-AAGCCTTTTCAAAAGCCCACAGAAATTGGTAA
*
161852 TAACATTTTCAAA
1 TAACCTTTTCAAA
161865 ATCCCACATG
Statistics
Matches: 113, Mismatches: 23, Indels: 3
0.81 0.17 0.02
Matches are distributed among these distances:
124 16 0.14
125 95 0.84
126 2 0.02
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.30
Consensus pattern (124 bp):
TAACCTTTTCAAAGTCACACGAGTTGGTGGCAAACTTTCCAAAGTCCACACGAGTTGGTGGCACC
ATAGTCAAAGTCCAAATGAGTTAGGGGAAGCCTTTTCAAAAGCCCACAGAAATTGGTAA
Found at i:161972 original size:32 final size:32
Alignment explanation
Indices: 161894--163819 Score: 1187
Period size: 32 Copynumber: 60.4 Consensus size: 32
161884 AACTCTACAT
* * * *
161894 GAGTTGGTGACAACCGTTTC-AAAGTCTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * *
161925 AAGCTGTTGGAAACCTTTTCAAAAGCCCATAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
**
161957 GAGTTGGTGGCAACCTTTTCAAAATTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
*
161989 GAGTTGGTGGCAACC-TTTCAAAATCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * *
162020 AAGTTGGTAGCAGCATTTTTAAAAGCCTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * *
162052 TAGTTAGTGGTAAGCTTTGCAAATGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * *
162084 GAGTTGGTGGCAAACTTTT-GAAAGCCCAAAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * *
162115 AAGTTGTTGGTAACCTTTTTAAAAGCCCATAG
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * **
162147 GAGTTGGTGGCAGCATTTTCAAAAATCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* ** *
162179 AAGTTGGTGGCAACCTTTTCAAAAATCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * *
162211 GAATTAGTGGTAACCATTTC-AAAGTCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
** * * * *
162242 GAGTTAATGGCAACC-GTTCAAAAGTCCATAA
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
*
162273 GAGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTT--------CAAAAGCCCACAC
* * * * * *
162313 AAGTAGGTAGTAACCATTTC-AAAGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * ***** *
162344 AAGTTGATGG-ATACCTTTTCAAAAGTTTGTAA
1 GAGTTGGTGGCA-ACCTTTTCAAAAGCCCACAC
* * *
162376 AAATTGGTGGCAACCTTTTCAAAAGCCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
** * *
162408 GAGTTGGTGATAACCTTTTC-AAAGTCTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * *
162439 AAGTTGTTAGCAACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
162471 GTGTTGGTGGCAACGTTTTCAAAATCCTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* **
162503 GAGTTGGTGGCAACCTTTTCAAAATCTGACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * ** *
162535 AAGTTGGTAGTAACCTTTTTGAAACCCCACA-
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * ** *
162566 GAGTTGGTGGTAACCATTTCAAAAATCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * *
162598 GTGTTGGTAGCAACCTTTTTAAAAGCCTACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* ***
162630 GAGTTTGTGGCAACCTTTTC-AAAGTTTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * *
162661 GAGTTTGTGG-TACCATATCCAAAGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * **
162692 GAG-T--TGGCAACATTTTTAGAAGCCCACGT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * *
162721 AAGGTGGTGGGAACCTTTTC-AAAGTCTATAA
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * ** * * *
162752 AAGTTGGTGGCAACATAGTC-AAAGTCAACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
162783 GAGTTGGTGGCAACATTTTCAAAA-CCGCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCC-CACAC
* * * *
162815 AAGTTGATGGCCACTTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * *
162847 AAGCTAGTGGCAGCCTTTTTTAAAA-CCCACAC
1 GAGTTGGTGGCAACC-TTTTCAAAAGCCCACAC
* * * **
162879 GAGTTGATGGCAACCTTCTC-AAAGTCCACGT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
162910 GAGTTGGTTGCAACATTTTCAAAAGCCCAAAAGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAG--C------CCACAC
** *
162950 GAGTTGGTGATAACCTTTTCAAAAGCCCCGCAC
1 GAGTTGGTGGCAACCTTTTCAAAAG-CCCACAC
* * *
162983 GAGTTGGTGACAACCTTTTCAAAAGCCTATGA-
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCA-CAC
* *
163015 GAGTTGGTCGCTACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
** * * *
163047 GAGTTGGTGATAACTTTTTC-AAAGTCAACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
163078 AAGTTGTTGGCAACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * *
163110 GAGTTGATGGCAACCTTTTCAAAATCGCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
** * **
163142 GAGTTGGCAGCAACTTTTTCAAAAATCCACA-
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
** * *
163173 GAGTTGGTAACAACCTTTTCAAAA-TCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * *
163204 AAGTTGTTGGTAACATTTTCAAAAGCCTATAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
163236 GAGTTGGTGGTAACCTTTTCAAAATCCCAAAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
163268 GCGTTGGTGGCAAACTTTTCAAAATCCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * *
163300 GAGTAGGTGACAACCTTTTC-AAAGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * *
163331 -ATGTTGTTAGCAACCTTTTCAAAATCCCACAC
1 GA-GTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * *
163363 GAGTTGGTGGCAGCCTTTTTAAAATCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * ** * *
163395 AAGTTGGTGACAA-CTTTTTTAGAGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
163426 AAGTTGTTGGCAACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
163458 GAGTTGGTAGCAACCTTTTCAAAATCCCATAA
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
163490 GAGTTGATGGCAACCTTTTCAAAATCTCGCAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
163522 GACTTGGTAGCAACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * *
163554 AAGTTGGTGGCAACCTTTGCGAAAGTCTATAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
163586 AAGTTGGTGGCAACCTTCTC-AAAGCCTACAA
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
163617 GAATTGGTGGCAACCTTTTCAAAAGCCCGCAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * ** *
163649 AAATTGGTGATAACCTTTTC-AAAGCCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
163680 TAGTTGGTGGCAACCGTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
163712 G-GTTTGGTGGTATCCTTTTC-AAAGTCTACAC
1 GAG-TTGGTGGCAACCTTTTCAAAAGCCCACAC
* ** *
163743 GAGTTGATGGCAATATTTTTAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * *
163775 GAGTTGATGGCAACCTTTTCAAAA-TCTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
*
163806 GAGTTGATGGCAAC
1 GAGTTGGTGGCAAC
163820 TTACGAGTTA
Statistics
Matches: 1455, Mismatches: 389, Indels: 102
0.75 0.20 0.05
Matches are distributed among these distances:
28 3 0.00
29 13 0.01
30 22 0.02
31 477 0.33
32 848 0.58
33 42 0.03
39 2 0.00
40 48 0.03
ACGTcount: A:0.31, C:0.23, G:0.19, T:0.27
Consensus pattern (32 bp):
GAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
Found at i:162008 original size:63 final size:64
Alignment explanation
Indices: 161894--163819 Score: 1185
Period size: 63 Copynumber: 30.2 Consensus size: 64
161884 AACTCTACAT
* * * * * * * *
161894 GAGTTGGTGACAACCGTTTC-AAAGTCTACACAAGCTGTTGGAAACCTTTTCAAAAGCCCATAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* *
161957 GAGTTGGTGGCAACCTTTTCAAAATTCCACACGAGTTGGTGGCAACC-TTTCAAAATCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * * * * * * *
162020 AAGTTGGTAGCAGCATTTTTAAAAG-CCTACACTAGTTAGTGGTAAGCTTTGCAAATGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCC-ACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * * * * *
162084 GAGTTGGTGGCAAACTTTT-GAAAGCCCAAACAAGTTGTTGGTAACCTTTTTAAAAGCCCATAG
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * ** *
162147 GAGTTGGTGGCAGCATTTTCAAAAATCCACACAAGTTGGTGGCAACCTTTTCAAAAATCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * ** * * * *
162211 GAATTAGTGGTAACCATTTC-AAAGTCCACATGAGTTAATGGCAACC-GTTCAAAAGTCCATAA
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * *
162273 GAGTTGGTGTCAACCTTTTCAAAAGCCCAAAAGCCCACACAAGTAGGTAGTAACCATTTC-AAAG
1 GAGTTGGTGGCAACCTTTT--------CAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG
*
162337 TCCACAC
58 CCCACAC
* * **** ** * *
162344 AAGTTGATGG-ATACCTTTTCAAAAGTTTGTAAAAATTGGTGGCAACCTTTTCAAAAGCCCACAT
1 GAGTTGGTGGCA-ACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
** * * * *
162408 GAGTTGGTGATAACCTTTTC-AAAGTCTACACAAGTTGTTAGCAACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * **
162471 GTGTTGGTGGCAACGTTTTCAAAA-TCCTACACGAGTTGGTGGCAACCTTTTCAAAATCTGACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCC-ACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * ** ** * * ** *
162535 AAGTTGGTAGTAACCTTTTTGAAACCCCACA-GAGTTGGTGGTAACCATTTCAAAAATCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * ***
162598 GTGTTGGTAGCAACCTTTTTAAAAG-CCTACATGAGTTTGTGGCAACCTTTTC-AAAGTTTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCC-ACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * * * **
162661 GAGTTTGTGG-TACCATATCCAAAGTCCACACGAG-T--TGGCAACATTTTTAGAAGCCCACGT
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * ** * ** * * *
162721 AAGGTGGTGGGAACCTTTTC-AAAGTCTATAAAAGTTGGTGGCAACATAGTC-AAAGTCAACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * ** * * *
162783 GAGTTGGTGGCAACATTTTCAAAA-CCGCACATAAGTTGATGGCCACTTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTC-CACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * * * * **
162847 AAGCTAGTGGCAGCCTTTTTTAAAA-CCCACACGAGTTGATGGCAACCTTCTC-AAAGTCCACGT
1 GAGTTGGTGGCAACC-TTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * **
162910 GAGTTGGTTGCAACATTTTCAAAAGCCCAAAAGTCCACACGAGTTGGTGATAACCTTTTCAAAAG
1 GAGTTGGTGGCAACCTTTT--------CAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAG
*
162975 CCCCGCAC
58 -CCCACAC
* * * *
162983 GAGTTGGTGACAACCTTTTCAAAAG-CCTATGA-GAGTTGGTCGCTACCTTTTCAAAAGCCCACA
1 GAGTTGGTGGCAACCTTTTCAAAAGTCC-A-CACGAGTTGGTGGCAACCTTTTCAAAAGCCCACA
163046 C
64 C
** * * * *
163047 GAGTTGGTGATAACTTTTTC-AAAGTCAACACAAGTTGTTGGCAACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* ** * **
163110 GAGTTGATGGCAACCTTTTCAAAA-TCGCACACGAGTTGGCAGCAACTTTTTCAAAAATCCACA-
1 GAGTTGGTGGCAACCTTTTCAAAAGTC-CACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
** ** * * * * * *
163173 GAGTTGGTAACAACCTTTTCAAAA-TCCACATAAGTTGTTGGTAACATTTTCAAAAGCCTATAT
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * *
163236 GAGTTGGTGGTAACCTTTTCAAAA-TCCCAAATGCGTTGGTGGCAAACTTTTCAAAATCCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * *
163300 GAGTAGGTGACAACCTTTTC-AAAGTCCACAC-ATGTTGTTAGCAACCTTTTCAAAATCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGA-GTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * ** * *
163363 GAGTTGGTGGCAGCCTTTTTAAAA-TCCCACACAAGTTGGTGACAA-CTTTTTTAGAGTCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGT-CCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * *
163426 AAGTTGTTGGCAACCTTTTCAAAAGCCCACACGAGTTGGTAGCAACCTTTTCAAAATCCCATAA
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * *
163490 GAGTTGATGGCAACCTTTTCAAAA-TCTCGCACGACTTGGTAGCAACCTTTTCAAAAGCCCACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTC-CACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * * * *
163554 AAGTTGGTGGCAACCTTTGCGAAAGTCTATACAAGTTGGTGGCAACCTTCTC-AAAGCCTACAA
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * ** *
163617 GAATTGGTGGCAACCTTTTCAAAAGCCCGCACAAATTGGTGATAACCTTTTC-AAAGCCCACAT
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
* * * * * * *
163680 TAGTTGGTGGCAACCGTTTCAAAAGCCCACACG-GTTTGGTGGTATCCTTTTC-AAAGTCTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAG-TTGGTGGCAACCTTTTCAAAAGCCCACAC
* ** * * * * *
163743 GAGTTGATGGCAATATTTTTAAAAGCCCACACGAGTTGATGGCAACCTTTTCAAAA-TCTACAC
1 GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
*
163806 GAGTTGATGGCAAC
1 GAGTTGGTGGCAAC
163820 TTACGAGTTA
Statistics
Matches: 1419, Mismatches: 380, Indels: 128
0.74 0.20 0.07
Matches are distributed among these distances:
59 11 0.01
60 22 0.02
61 8 0.01
62 99 0.07
63 684 0.48
64 455 0.32
65 44 0.03
66 1 0.00
70 6 0.00
71 63 0.04
72 7 0.00
73 19 0.01
ACGTcount: A:0.31, C:0.23, G:0.19, T:0.27
Consensus pattern (64 bp):
GAGTTGGTGGCAACCTTTTCAAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAAGCCCACAC
Found at i:162954 original size:40 final size:40
Alignment explanation
Indices: 162899--162977 Score: 106
Period size: 40 Copynumber: 2.0 Consensus size: 40
162889 CAACCTTCTC
**
162899 AAAGTCCACGTGAGTTGGTTG-CAACATTTTCAAAAGCCCA
1 AAAGTCCACACGAGTTGG-TGACAACATTTTCAAAAGCCCA
* *
162939 AAAGTCCACACGAGTTGGTGATAACCTTTTCAAAAGCCC
1 AAAGTCCACACGAGTTGGTGACAACATTTTCAAAAGCCC
162978 CGCACGAGTT
Statistics
Matches: 34, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
39 2 0.06
40 32 0.94
ACGTcount: A:0.33, C:0.24, G:0.19, T:0.24
Consensus pattern (40 bp):
AAAGTCCACACGAGTTGGTGACAACATTTTCAAAAGCCCA
Found at i:164120 original size:31 final size:30
Alignment explanation
Indices: 163822--164684 Score: 392
Period size: 31 Copynumber: 27.8 Consensus size: 30
163812 ATGGCAACTT
*
163822 ACGAGTTAGTGGCAACCTTTTCAAAGT-C-C
1 ACGAGTTGGTGGC-ACCTTTTCAAAGTCCAC
* *
163851 ATGAGTTGGTGGCACCGTAGTT-AAAGTCCAC
1 ACGAGTTGGTGGCACC-T-TTTCAAAGTCCAC
* * *
163882 ACGAGTTGGTGGCTACTTTTTCAAAAGCCCAT
1 ACGAGTTGGTGGC-ACCTTTTC-AAAGTCCAC
* * * * *
163914 ACAAGTTAGTGGTAACATATTT-AAAATCCAC
1 ACGAGTTGGTGG-CACCT-TTTCAAAGTCCAC
* * * *
163945 ACGAGTTCGTGGCAATCTTTTTAAAGTTCAC
1 ACGAGTTGGTGGC-ACCTTTTCAAAGTCCAC
* *
163976 ACGAGTTGGTGGCA-C----CATAGTTCAC
1 ACGAGTTGGTGGCACCTTTTCAAAGTCCAC
* * *
164001 ATGAGTTAGTGGCAGCCTTTTCAAAAGCCCAC
1 ACGAGTTGGTGGCA-CCTTTTC-AAAGTCCAC
* * * *
164033 ACGAGTTGGTGACAACATTTTCAAAGTTCAT
1 ACGAGTTGGTGGC-ACCTTTTCAAAGTCCAC
* * *
164064 AAGAGTAGGTGGTAACCTTTT-AAAGTCCAC
1 ACGAGTTGGTGG-CACCTTTTCAAAGTCCAC
***
164094 ACGAGTTGGTGGCACCACAGTCAAAGTCCAC
1 ACGAGTTGGTGGCACC-TTTTCAAAGTCCAC
* * *
164125 ACAAGTTGGTGGTAACTTTTTCAAAAGCTCGCAC
1 ACGAGTTGGTGG-CACCTTTTC-AAAG-TC-CAC
* * * * *
164159 A--AGTCGGTGCCAACATTTTCAAAG-CTAG
1 ACGAGTTGGTGGC-ACCTTTTCAAAGTCCAC
*
164187 ACGAGTTGGTGACAACCTTTTCAAAGTCCAC
1 ACGAGTTGGTGGC-ACCTTTTCAAAGTCCAC
*
164218 ACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
1 ACGAGTTGGTGG-CACCTTTTCAAAGTCCAC
* *
164249 ACGAGTTGGTGGTAACCTTTTCAAAGTCTAC
1 ACGAGTTGGTGG-CACCTTTTCAAAGTCCAC
*
164280 ACGAGTTGGTGGCAACCCTTTCAAAGTCCAC
1 ACGAGTTGGTGGC-ACCTTTTCAAAGTCCAC
* * ** *
164311 ATGAGTTGGTGGTAGCAC-AGTCAAAGTCCAT
1 ACGAGTTGGTGGCA-C-CTTTTCAAAGTCCAC
* ** **
164342 ACAAGTTGGTGGCAATATTTTCAAAAACCCAC
1 ACGAGTTGGTGGC-ACCTTTTC-AAAGTCCAC
* * *
164374 ATGAGTTAGTGGTAACCTTTTCAAAGTCCAC
1 ACGAGTTGGTGG-CACCTTTTCAAAGTCCAC
** * **
164405 ATAAGTTGGTGGCATCATAGTCAAAGTCCAC
1 ACGAGTTGGTGGCA-CCTTTTCAAAGTCCAC
*
164436 ACGAGTTGGTGGCAACCTTTACAAAAG-CTCAC
1 ACGAGTTGGTGGC-ACCTTTTC-AAAGTC-CAC
* * * *
164468 ACGAGTTGGTGGTAACTTTTTTAAAAGTCTAC
1 ACGAGTTGGTGG-CAC-CTTTTCAAAGTCCAC
* * * * *
164500 ATGAATTGATGGTAACTTTTTTCAAAAG-CTCAC
1 ACGAGTTGGTGG-CAC-CTTTTC-AAAGTC-CAC
* **
164533 ATGAGTTGGTGATAACCTTTTCAAACGTCCAC
1 ACGAGTTGGTG-GCACCTTTTCAAA-GTCCAC
* ** * *
164565 ACGAGTTAGAAGCTACCTTTTTAAAAGCCCAC
1 ACGAGTTGGTGGC-ACC-TTTTCAAAGTCCAC
* ** * * *
164597 ATGAGTTAATGGCAATCTTTTCAAAGTCTAT
1 ACGAGTTGGTGGC-ACCTTTTCAAAGTCCAC
* * *
164628 ACGAGTTGGTGACACCATAGTT-AAAGTCCAT
1 ACGAGTTGGTGGCACC-T-TTTCAAAGTCCAC
* *
164659 AAGAGTTGGTGGCAGCTTTTTCAAAG
1 ACGAGTTGGTGGCA-CCTTTTCAAAG
164685 CTCACAAGTC
Statistics
Matches: 627, Mismatches: 151, Indels: 110
0.71 0.17 0.12
Matches are distributed among these distances:
25 20 0.03
27 1 0.00
28 5 0.01
29 22 0.04
30 53 0.08
31 313 0.50
32 173 0.28
33 36 0.06
34 4 0.01
ACGTcount: A:0.30, C:0.20, G:0.21, T:0.28
Consensus pattern (30 bp):
ACGAGTTGGTGGCACCTTTTCAAAGTCCAC
Found at i:164253 original size:62 final size:62
Alignment explanation
Indices: 163822--164684 Score: 526
Period size: 62 Copynumber: 13.9 Consensus size: 62
163812 ATGGCAACTT
* * *
163822 ACGAGTTAGTGGCAACCTTTTCAAAGT-C-CATGAGTTGGTGGC-ACCGTAGTT-AAAGTCCAC
1 ACGAGTTGGTGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACC-T-TTTCAAAGTCCAC
* * * * * * * * *
163882 ACGAGTTGGTGGCTACTTTTTCAAAAGCCCATACAAGTTAGTGGTAACATATTT-AAAATCCAC
1 ACGAGTTGGTGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCT-TTTCAAAGTCCAC
* * * * * *
163945 ACGAGTTCGTGGCAATCTTTTTAAAGTTCACACGAGTTGGTGGC-A-C----CATAGTTCAC
1 ACGAGTTGGTGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
* * * * * * * *
164001 ATGAGTTAGTGGCAGCCTTTTCAAAAGCCCACACGAGTTGGTGACAACATTTTCAAAGTTCAT
1 ACGAGTTGGTGGCAACCTTTTC-AAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
* * * ***
164064 AAGAGTAGGTGGTAACCTTTT-AAAGTCCACACGAGTTGGTGGC-ACCACAGTCAAAGTCCAC
1 ACGAGTTGGTGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACC-TTTTCAAAGTCCAC
* * * * * * * *
164125 ACAAGTTGGTGGTAACTTTTTCAAAAGCTCGCACA--AGTCGGTGCCAACATTTTCAAAG-CTAG
1 ACGAGTTGGTGGCAACCTTTTC-AAAG-TC-CACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
* *
164187 ACGAGTTGGTGACAACCTTTTCAAAGTCCACACGAGTTGGTGGTAACCTTTTCAAAGTCCAC
1 ACGAGTTGGTGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
* * *
164249 ACGAGTTGGTGGTAACCTTTTCAAAGTCTACACGAGTTGGTGGCAACCCTTTCAAAGTCCAC
1 ACGAGTTGGTGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
* * * ** * * ** **
164311 ATGAGTTGGTGGTAGCAC-AGTCAAAGTCCATACAAGTTGGTGGCAATATTTTCAAAAACCCAC
1 ACGAGTTGGTGGCAAC-CTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTC-AAAGTCCAC
* * * ** * * **
164374 ATGAGTTAGTGGTAACCTTTTCAAAGTCCACATAAGTTGGTGGCATCATAGTCAAAGTCCAC
1 ACGAGTTGGTGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
* * * * *
164436 ACGAGTTGGTGGCAACCTTTACAAAAG-CTCACACGAGTTGGTGGTAACTTTTTTAAAAGTCTAC
1 ACGAGTTGGTGGCAACCTTTTC-AAAGTC-CACACGAGTTGGTGGCAAC-CTTTTCAAAGTCCAC
* * * * * * **
164500 ATGAATTGATGGTAACTTTTTTCAAAAG-CTCACATGAGTTGGTGATAACCTTTTCAAACGTCCA
1 ACGAGTTGGTGGCAAC-CTTTTC-AAAGTC-CACACGAGTTGGTGGCAACCTTTTCAAA-GTCCA
164564 C
62 C
* ** * * * * ** * * *
164565 ACGAGTTAGAAGCTACCTTTTTAAAAGCCCACATGAGTTAATGGCAATCTTTTCAAAGTCTAT
1 ACGAGTTGGTGGCAACC-TTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
* * * * * *
164628 ACGAGTTGGTGAC-ACCATAGTT-AAAGTCCATAAGAGTTGGTGGCAGCTTTTTCAAAG
1 ACGAGTTGGTGGCAACC-T-TTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAG
164685 CTCACAAGTC
Statistics
Matches: 614, Mismatches: 157, Indels: 62
0.74 0.19 0.07
Matches are distributed among these distances:
56 23 0.04
57 19 0.03
58 1 0.00
59 4 0.01
60 23 0.04
61 74 0.12
62 195 0.32
63 163 0.27
64 62 0.10
65 50 0.08
ACGTcount: A:0.30, C:0.20, G:0.21, T:0.28
Consensus pattern (62 bp):
ACGAGTTGGTGGCAACCTTTTCAAAGTCCACACGAGTTGGTGGCAACCTTTTCAAAGTCCAC
Found at i:164413 original size:125 final size:124
Alignment explanation
Indices: 164207--164447 Score: 313
Period size: 125 Copynumber: 1.9 Consensus size: 124
164197 GACAACCTTT
* * * ** *
164207 TCAAAGTCCACACGAGTTGGTGGTAACCTTTTCAAAGTCCACACGAGTTGGTGGTAACCTTTTCA
1 TCAAAGTCCACACAAGTTGGTGGCAACATTTTCAAAACCCACACGAGTTAGTGGTAACCTTTTCA
* * * * *
164272 AAGTCTACACGAGTTGGTGGCAACCCT-TTCAAAGTCCACATGAGTTGGTGGTAGCACAG
66 AAGTCCACACAAGTTGGTGGC-ACCATAGTCAAAGTCCACACGAGTTGGTGGTAGCACAG
* * *
164331 TCAAAGTCCATACAAGTTGGTGGCAATATTTTCAAAAACCCACATGAGTTAGTGGTAACCTTTTC
1 TCAAAGTCCACACAAGTTGGTGGCAACATTTTC-AAAACCCACACGAGTTAGTGGTAACCTTTTC
* *
164396 AAAGTCCACATAAGTTGGTGGCATCATAGTCAAAGTCCACACGAGTTGGTGG
65 AAAGTCCACACAAGTTGGTGGCACCATAGTCAAAGTCCACACGAGTTGGTGG
164448 CAACCTTTAC
Statistics
Matches: 99, Mismatches: 16, Indels: 3
0.84 0.14 0.03
Matches are distributed among these distances:
124 31 0.31
125 68 0.69
ACGTcount: A:0.29, C:0.21, G:0.23, T:0.27
Consensus pattern (124 bp):
TCAAAGTCCACACAAGTTGGTGGCAACATTTTCAAAACCCACACGAGTTAGTGGTAACCTTTTCA
AAGTCCACACAAGTTGGTGGCACCATAGTCAAAGTCCACACGAGTTGGTGGTAGCACAG
Found at i:164427 original size:94 final size:94
Alignment explanation
Indices: 163822--164571 Score: 442
Period size: 93 Copynumber: 8.1 Consensus size: 94
163812 ATGGCAACTT
* * * * * *
163822 ACGAGTTAGTGGCAACCTTTTCAAAGT-C-CATGAGTTGGTGGCACCGTAGTTAAAGTCCACACG
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCACATGAGTTGGTGGTAACATAGTCAAAGTCCACACG
* * *
163885 AGTTGGTGGCTACTTTTTCAAAAGCCCAT
66 AGTTGGTGGCAACCTTTTCAAAAGCCCAC
* * * * * * * ** * *
163914 ACAAGTTAGTGGTAACATATTT-AAAATCCACACGAGTTCGTGGCAATC-TTTTTAAAGTTCACA
1 ACGAGTTGGTGGTAACCT-TTTCAAAGTCCACATGAGTTGGTGGTAA-CATAGTCAAAGTCCACA
* **
163977 CGAGTTGGTGGC-A-C----C-ATAGTTCAC
64 CGAGTTGGTGGCAACCTTTTCAAAAGCCCAC
* * * * * * ** ** * * *
164001 ATGAGTTAGTGGCAGCCTTTTCAAAAGCCCACACGAGTTGGTGACAACATTTTCAAAGTTCATAA
1 ACGAGTTGGTGGTAACCTTTTC-AAAGTCCACATGAGTTGGTGGTAACATAGTCAAAGTCCACAC
* * *
164066 GAGTAGGTGGTAACCTTTT--AAAGTCCAC
65 GAGTTGGTGGCAACCTTTTCAAAAGCCCAC
* *** ** * **
164094 ACGAGTTGGTGG-CACCACAGTCAAAGTCCACACAAGTTGGTGGTAACTTTTTCAAAAGCTCGCA
1 ACGAGTTGGTGGTAACC-TTTTCAAAGTCCACATGAGTTGGTGGTAACATAGTC-AAAG-TC-CA
* * * * *
164158 CA--AGTCGGTGCCAACATTTTC-AAAG-CTAG
62 CACGAGTTGGTGGCAACCTTTTCAAAAGCCCAC
** * * **
164187 ACGAGTTGGTGACAACCTTTTCAAAGTCCACACGAGTTGGTGGTAACCTTTTCAAAGTCCACACG
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCACATGAGTTGGTGGTAACATAGTCAAAGTCCACACG
* * *
164252 AGTTGGTGGTAACCTTTTC-AAAGTCTAC
66 AGTTGGTGGCAACCTTTTCAAAAGCCCAC
* * * * * *
164280 ACGAGTTGGTGGCAACCCTTTCAAAGTCCACATGAGTTGGTGGTAGCACAGTCAAAGTCCATACA
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCACATGAGTTGGTGGTAACATAGTCAAAGTCCACACG
** *
164345 AGTTGGTGGCAATATTTTCAAAAACCCAC
66 AGTTGGTGGCAACCTTTTCAAAAGCCCAC
* * * * *
164374 ATGAGTTAGTGGTAACCTTTTCAAAGTCCACATAAGTTGGTGGCATCATAGTCAAAGTCCACACG
1 ACGAGTTGGTGGTAACCTTTTCAAAGTCCACATGAGTTGGTGGTAACATAGTCAAAGTCCACACG
* *
164439 AGTTGGTGGCAACCTTTACAAAAGCTCAC
66 AGTTGGTGGCAACCTTTTCAAAAGCCCAC
* * * * * * **
164468 ACGAGTTGGTGGTAACTTTTTTAAAAGTCTACATGAATTGATGGTAACTTTTTTCAAAAG-CTCA
1 ACGAGTTGGTGGTAAC-CTTTTCAAAGTCCACATGAGTTGGTGGTAAC-ATAGTC-AAAGTC-CA
* ** * *
164532 CATGAGTTGGTGATAACCTTTTCAAACGTCCAC
62 CACGAGTTGGTGGCAACCTTTTCAAAAGCCCAC
164565 ACGAGTT
1 ACGAGTT
164572 AGAAGCTACC
Statistics
Matches: 517, Mismatches: 114, Indels: 49
0.76 0.17 0.07
Matches are distributed among these distances:
86 3 0.01
87 19 0.04
88 43 0.08
89 1 0.00
90 5 0.01
91 2 0.00
92 70 0.14
93 160 0.31
94 144 0.28
95 27 0.05
96 4 0.01
97 39 0.08
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (94 bp):
ACGAGTTGGTGGTAACCTTTTCAAAGTCCACATGAGTTGGTGGTAACATAGTCAAAGTCCACACG
AGTTGGTGGCAACCTTTTCAAAAGCCCAC
Found at i:164586 original size:65 final size:63
Alignment explanation
Indices: 164425--164635 Score: 165
Period size: 64 Copynumber: 3.3 Consensus size: 63
164415 GGCATCATAG
** * * * * *
164425 TCAAAGTCCACACGAGTTGGTGGCAACC-TTTACAAAAGCTCACACGAGTTGGTGGTAACTTTTT
1 TCAAAGTCCACACGAGTT-GAAGCTACCTTTTTCAAAAGCTCACATGAGTTGGTGATAAC-CTTT
* * * * * * *
164489 TAAAAGTCTACATGAATTGATGGTAACTTTTTTCAAAAGCTCACATGAGTTGGTGATAACCTTT
1 TCAAAGTCCACACGAGTTGAAGCT-ACCTTTTTCAAAAGCTCACATGAGTTGGTGATAACCTTT
* ** ** *
164553 TCAAACGTCCACACGAGTTAGAAGCTACCTTTTT-AAAAGCCCACATGAGTTAATGGCAATCTTT
1 TCAAA-GTCCACACGAGTT-GAAGCTACCTTTTTCAAAAGCTCACATGAGTTGGTGATAACCTTT
* *
164617 TCAAAGTCTATACGAGTTG
1 TCAAAGTCCACACGAGTTG
164636 GTGACACCAT
Statistics
Matches: 115, Mismatches: 28, Indels: 10
0.75 0.18 0.07
Matches are distributed among these distances:
62 1 0.01
63 13 0.11
64 52 0.45
65 45 0.39
66 4 0.03
ACGTcount: A:0.31, C:0.19, G:0.18, T:0.31
Consensus pattern (63 bp):
TCAAAGTCCACACGAGTTGAAGCTACCTTTTTCAAAAGCTCACATGAGTTGGTGATAACCTTT
Found at i:167802 original size:2 final size:2
Alignment explanation
Indices: 167795--167848 Score: 99
Period size: 2 Copynumber: 27.0 Consensus size: 2
167785 CAACACATTG
*
167795 AT AT AT AT AT AT AT AT AT AT AT AT AT AT GT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
167837 AT AT AT AT AT AT
1 AT AT AT AT AT AT
167849 TATTCCTACC
Statistics
Matches: 50, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
2 50 1.00
ACGTcount: A:0.48, C:0.00, G:0.02, T:0.50
Consensus pattern (2 bp):
AT
Found at i:169154 original size:2 final size:2
Alignment explanation
Indices: 169147--169177 Score: 62
Period size: 2 Copynumber: 15.5 Consensus size: 2
169137 TCAATACACC
169147 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
169178 TCTTCCTAAT
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 29 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:169879 original size:18 final size:19
Alignment explanation
Indices: 169858--169893 Score: 56
Period size: 18 Copynumber: 1.9 Consensus size: 19
169848 TTTGTTTAAG
169858 TTTTGTTTTTTGT-TTTTT
1 TTTTGTTTTTTGTATTTTT
*
169876 TTTTTTTTTTTGTATTTT
1 TTTTGTTTTTTGTATTTT
169894 GTATTTTGCC
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
18 12 0.75
19 4 0.25
ACGTcount: A:0.03, C:0.00, G:0.08, T:0.89
Consensus pattern (19 bp):
TTTTGTTTTTTGTATTTTT
Found at i:171695 original size:20 final size:20
Alignment explanation
Indices: 171653--171695 Score: 52
Period size: 20 Copynumber: 2.1 Consensus size: 20
171643 GGATTTGAGT
* *
171653 TTTTAATTATATTTTTTTGA
1 TTTTAATTATATTTATTTAA
171673 TTTTAATT-TATTATATTTAA
1 TTTTAATTATATT-TATTTAA
171693 TTT
1 TTT
171696 AGATTATTAT
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
19 4 0.20
20 16 0.80
ACGTcount: A:0.28, C:0.00, G:0.02, T:0.70
Consensus pattern (20 bp):
TTTTAATTATATTTATTTAA
Done.