Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1761
Parameters: 2 7 7 80 10 50 1000
Length:  49320

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1096--1123
2
14.0
2
100
0
56
50
0
0
50
1.00
1318--1348
4
7.8
4
100
0
62
22
0
0
77
0.77
1654--1683
9
3.3
9
95
0
51
16
0
0
83
0.65
1675--1725
24
2.1
25
85
3
68
43
0
1
54
1.11
5481--5547
32
2.1
32
88
5
100
37
1
2
58
1.23
7355--7455
11
9.7
11
68
14
63
55
0
0
43
1.06
7358--7430
37
1.9
38
84
13
98
54
0
1
43
1.08
7395--7459
32
2.1
31
85
8
87
55
0
0
44
0.99
7372--7467
16
5.5
17
69
16
63
56
1
1
41
1.13
8677--8719
22
2.0
22
86
9
61
39
2
0
58
1.11
15876--15909
17
2.0
17
88
11
52
35
0
0
64
0.94
28532--28584
21
2.5
22
75
12
56
49
0
0
50
1.00
28810--28846
15
2.5
15
90
0
56
37
0
8
54
1.30
28880--28931
16
3.3
15
82
12
52
21
13
23
42
1.88
28942--29044
53
1.9
53
82
3
127
24
10
22
42
1.85
29580--29628
16
3.1
16
91
5
73
28
20
14
36
1.92
29633--29676
16
2.8
16
85
0
61
34
2
6
56
1.38
29718--29749
16
2.1
15
94
5
55
56
0
0
43
0.99
34730--34774
22
2.0
23
83
12
58
62
0
0
37
0.96
34931--35017
42
2.0
42
82
4
102
44
0
0
55
0.99
36102--36169
23
3.1
23
79
8
79
58
1
0
39
1.07
36980--37032
18
3.2
16
75
20
56
54
3
1
39
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37599--37651
3
17.7
3
85
14
74
33
1
0
64
1.05
37945--37978
13
2.5
13
95
4
59
44
0
0
55
0.99
38087--38181
11
8.1
11
68
18
50
40
2
0
57
1.10
41939--41998
26
2.4
25
78
13
70
41
0
0
58
0.98
41933--42033
43
2.3
44
81
6
116
45
0
0
54
0.99
41934--42018
15
5.5
17
64
26
55
42
0
0
57
0.98
46170--46275
56
1.9
56
100
0
212
47
25
4
22
1.71
47825--47868
2
22.0
2
95
0
79
52
0
0
47
1.00
48844--48882
18
2.1
19
85
4
53
20
0
10
69
1.17

Tables:   1

The End!