Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1763
Parameters: 2 7 7 80 10 50 1000
Length:  38499

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10944--11145
42
4.8
42
68
15
114
45
15
23
15
1.85
10832--11188
84
4.2
85
77
11
322
45
13
22
17
1.83
11002--11188
87
2.2
85
81
6
209
47
14
21
16
1.83
11248--11397
46
3.2
45
83
4
183
43
9
24
23
1.83
11258--11392
47
2.9
47
85
1
182
43
9
24
22
1.83
11467--11520
28
1.9
28
92
0
90
44
5
27
22
1.75
11504--11581
39
2.0
40
89
2
122
42
14
24
19
1.88
11510--11681
40
4.3
40
79
5
179
42
14
25
18
1.87
11510--11773
120
2.2
118
79
12
283
41
15
25
17
1.89
12153--12503
88
4.0
86
83
5
386
28
16
27
27
1.97
14581--14697
58
2.0
59
95
5
211
38
24
16
20
1.92
18045--18098
20
2.7
20
88
2
72
31
16
12
38
1.87
24203--24272
28
2.5
27
88
9
97
25
18
32
22
1.97
24260--24478
51
4.3
51
79
8
214
33
12
24
30
1.92
26959--27025
33
2.0
33
85
0
89
43
14
14
26
1.85
27045--27098
19
2.8
19
100
0
108
37
14
11
37
1.82
27912--29274
59
23.3
59
90
4
1914
26
20
27
25
1.99
27916--29274
466
2.9
465
93
2
2294
26
20
27
25
1.99
30270--30313
8
5.5
8
86
13
56
0
2
9
88
0.59
30267--30314
18
2.6
17
87
6
60
0
2
10
87
0.62
30267--30314
13
3.9
12
83
10
62
0
2
10
87
0.62

Tables:   1

The End!