Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1765
Parameters: 2 7 7 80 10 50 1000
Length:  53672

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
292--320
13
2.1
14
93
6
51
0
10
0
89
0.48
292--320
7
4.3
7
91
8
51
0
10
0
89
0.48
860--943
26
3.0
27
73
15
73
46
1
1
51
1.16
1853--1901
3
16.3
3
91
0
80
65
2
2
30
1.15
2404--2445
14
3.1
14
77
16
52
50
0
4
45
1.23
2441--2491
26
1.9
27
88
4
77
43
0
0
56
0.99
2487--2543
24
2.4
24
79
2
62
57
1
0
40
1.09
3615--3649
14
2.6
14
90
4
54
37
0
0
62
0.95
3721--3784
17
3.4
18
82
12
60
62
3
0
34
1.11
3735--3783
17
2.7
18
90
6
73
63
0
0
36
0.95
3836--3879
22
2.0
22
91
8
72
27
6
11
54
1.61
7575--7618
2
22.0
2
95
0
79
50
2
0
47
1.13
7882--7937
17
3.3
17
75
20
55
30
3
0
66
1.09
7924--7975
23
2.2
24
80
10
63
55
1
0
42
1.10
7998--8043
19
2.2
20
85
11
58
52
0
2
45
1.13
8065--8119
10
5.4
10
72
20
51
56
1
0
41
1.10
8067--8133
16
4.1
16
74
14
57
56
1
0
41
1.08
8098--8148
18
2.9
17
77
11
50
58
0
0
41
0.98
8047--8156
41
2.6
42
81
9
120
53
1
1
42
1.22
9398--9430
17
2.0
17
94
5
59
84
15
0
0
0.61
13754--13791
13
2.9
14
88
11
55
57
7
0
34
1.28
13983--14071
31
2.7
32
75
19
94
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14878--14930
13
3.8
13
74
13
52
66
1
0
32
1.03
16185--16227
15
2.9
15
86
6
52
62
0
0
37
0.95
16434--16481
21
2.5
20
83
16
57
41
0
0
58
0.98
16687--16716
15
2.0
15
93
0
51
50
10
0
40
1.36
17386--17464
39
2.0
39
95
0
140
43
2
5
49
1.38
18202--18245
16
2.6
17
78
10
54
68
0
0
31
0.90
18226--18290
29
2.3
28
79
10
69
55
1
3
40
1.25
18692--18737
24
1.9
24
82
8
58
45
4
2
47
1.34
19768--19850
27
3.1
27
81
13
91
40
0
0
59
0.98
19824--19911
9
9.2
10
72
13
69
34
0
0
65
0.93
19783--19872
29
3.2
28
79
16
89
37
0
0
62
0.96
19851--19920
26
2.5
29
77
11
74
31
0
1
67
1.00
19768--19910
47
3.0
47
71
17
125
37
0
0
62
0.96
20503--20533
5
6.0
5
92
7
53
58
0
0
41
0.98
20503--20533
16
2.0
16
93
6
55
58
0
0
41
0.98
21147--21208
22
2.7
23
80
9
65
66
0
0
33
0.92
21145--21204
32
1.9
32
83
12
81
65
0
0
35
0.93
21432--21507
38
2.0
38
100
0
152
55
5
15
23
1.61
41217--41277
10
5.6
10
74
14
50
63
3
1
31
1.20
44529--44584
29
1.9
29
82
7
69
50
3
1
44
1.29
44817--44845
2
14.5
2
100
0
58
48
0
0
51
1.00
48481--48532
2
26.0
2
100
0
104
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50683--50737
17
3.4
17
75
25
64
56
1
0
41
1.10
50745--50794
20
2.5
19
74
6
55
50
8
10
32
1.65
51549--51579
3
10.3
3
100
0
62
67
0
32
0
0.91
52594--52635
22
1.9
22
90
0
66
35
0
0
64
0.94
52764--52824
20
2.9
21
75
18
63
50
1
0
47
1.10
52937--53024
35
2.6
35
79
12
87
45
0
0
54
0.99
52999--53042
23
2.0
23
86
4
63
45
0
0
54
0.99

Tables:   1

The End!