Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1774
Parameters: 2 7 7 80 10 50 1000
Length:  16489

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1585--1623
3
13.3
3
89
5
62
64
2
0
33
1.08
4509--4552
2
22.5
2
95
4
81
50
0
0
50
1.00
5112--5177
35
1.9
33
84
9
78
50
0
0
50
1.00
5109--5161
28
1.9
27
92
3
88
47
0
0
52
1.00
5530--5570
2
20.5
2
94
0
73
48
0
2
48
1.14
6063--6134
36
2.0
37
83
2
92
56
0
0
43
0.99
6607--6687
41
1.9
42
82
5
101
48
0
1
50
1.08
6634--6705
17
4.1
17
74
22
69
41
0
1
56
1.07
7693--7722
16
1.9
16
93
6
53
46
6
0
46
1.29
8848--8885
12
3.2
12
85
3
51
39
0
0
60
0.97
9293--9357
34
1.9
33
81
9
78
58
0
0
41
0.98
14889--15195
155
2.0
155
100
0
614
32
18
21
27
1.96

Tables:   1

The End!