Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1776
Parameters: 2 7 7 80 10 50 1000
Length:  35285

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2093--2125
2
16.5
2
100
0
66
51
0
0
48
1.00
3760--3798
2
19.5
2
100
0
78
48
0
0
51
1.00
4605--4638
14
2.5
13
90
4
50
82
2
2
11
0.89
7010--7054
3
15.0
3
100
0
90
33
0
0
66
0.92
8223--8264
20
2.1
20
86
0
57
50
9
7
33
1.62
16619--16668
24
2.1
24
82
14
59
38
2
2
58
1.21
17641--17707
32
2.1
32
100
0
134
47
13
11
26
1.77
21822--21856
12
2.8
13
91
4
54
2
8
0
88
0.61
23301--23513
92
2.3
92
78
2
246
38
10
15
35
1.82
23874--23972
52
1.9
52
97
0
189
43
4
9
43
1.55
25286--25316
14
2.3
14
94
5
55
61
0
9
29
1.28
26225--26264
2
20.5
2
85
14
57
52
0
2
45
1.14
26750--27307
191
2.9
190
85
4
726
41
6
12
39
1.70
26750--27354
95
6.3
96
78
8
570
41
6
13
38
1.69
27790--27860
38
1.9
37
81
16
85
64
2
0
32
1.08
28035--28083
24
2.0
25
88
4
73
75
4
4
16
1.11
32190--32229
12
3.5
12
80
13
57
75
0
5
20
0.99

Tables:   1

The End!