Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1777
Parameters: 2 7 7 80 10 50 1000
Length:  28641

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55--412
132
2.7
132
88
2
497
34
12
24
27
1.92
316--433
51
2.3
52
85
1
157
27
10
28
33
1.89
586--903
51
6.3
51
74
4
275
35
12
23
28
1.91
586--903
102
3.1
102
89
2
460
35
12
23
28
1.91
3214--3321
53
2.0
53
87
3
155
41
12
16
29
1.84
3234--3303
33
2.1
33
97
0
131
40
12
18
28
1.88
3214--3321
20
5.8
19
76
18
102
41
12
16
29
1.84
3253--3283
13
2.4
13
100
0
62
38
16
16
29
1.90
9088--9141
20
2.7
20
88
11
76
37
18
14
29
1.91
9170--9262
20
4.7
19
81
10
89
36
17
16
30
1.91
13683--13853
90
1.9
89
96
1
315
30
14
19
35
1.91
15352--15547
97
2.0
96
81
4
225
41
12
19
27
1.87
17925--17976
20
2.6
20
96
0
95
50
9
5
34
1.59
20551--20602
24
2.1
25
86
10
72
40
3
3
51
1.38
24598--24677
22
3.6
23
88
5
119
27
3
32
36
1.75
24592--24687
44
2.2
43
81
7
113
26
3
32
38
1.72
24643--24726
34
2.4
34
92
2
132
25
4
33
36
1.77

Tables:   1

The End!