Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1778
Parameters: 2 7 7 80 10 50 1000
Length:  12821

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1430--1489
27
2.2
28
87
3
86
33
33
15
18
1.92
1560--1662
28
3.6
29
84
8
122
30
31
18
20
1.96
1715--1933
48
4.7
47
75
12
209
26
24
16
31
1.97
1806--1889
41
2.0
41
86
4
116
28
23
17
29
1.97
1757--1929
91
1.9
90
87
5
251
27
24
16
31
1.96
2881--2925
12
4.0
12
73
26
53
35
17
13
33
1.89
2913--3056
50
2.8
50
81
11
168
34
19
16
29
1.94
2934--3056
50
2.4
52
89
6
189
35
19
17
27
1.94
3905--3944
21
1.9
21
89
0
62
27
20
15
37
1.92
8056--8080
4
6.2
4
100
0
50
76
0
0
24
0.80
10202--10256
28
1.9
29
88
3
85
36
18
25
20
1.94
10290--10361
28
2.6
28
88
0
99
23
19
34
22
1.96
10211--10412
107
1.9
108
82
3
255
30
14
28
26
1.95
10349--10618
51
5.3
50
84
5
283
33
10
25
30
1.90
10349--10618
103
2.6
102
81
4
285
33
10
25
30
1.90
10632--10756
51
2.4
52
86
9
166
32
12
24
31
1.92

Tables:   1

The End!