Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1785
Parameters: 2 7 7 80 10 50 1000
Length:  17437

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3967--4118
1
152.0
1
73
0
70
82
10
3
2
0.89
3967--4118
21
6.8
21
73
16
110
82
10
3
2
0.89
3967--4118
29
5.5
28
79
15
149
82
10
3
2
0.89
3972--4118
30
5.2
30
80
18
135
82
10
4
2
0.89
4007--4093
24
3.7
24
83
4
97
82
10
4
2
0.89
3995--4117
22
5.2
23
76
20
96
82
11
3
2
0.87
5558--5985
30
14.7
29
77
9
286
29
28
17
24
1.97
5584--5958
57
6.4
57
73
11
253
29
28
17
24
1.97
5767--6020
86
3.0
87
87
6
349
31
28
18
21
1.97
5767--6020
85
3.0
85
85
6
318
31
28
18
21
1.97
5767--6023
30
8.9
29
81
9
127
31
29
17
21
1.97
6026--6115
43
2.1
43
89
4
137
26
24
17
31
1.97
6069--6216
52
2.7
55
82
3
185
25
24
16
33
1.96
7053--7077
13
1.9
13
100
0
50
36
16
16
32
1.90
7033--7099
33
2.0
33
88
0
98
32
11
14
40
1.83
7140--7164
13
1.9
13
100
0
50
32
16
16
36
1.90
7173--7301
52
2.5
52
96
0
231
34
18
17
29
1.94
9895--10406
256
2.0
256
98
0
988
32
24
19
23
1.98
11686--11712
10
2.7
10
100
0
54
0
0
22
77
0.76

Tables:   1

The End!