Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1790
Parameters: 2 7 7 80 10 50 1000
Length:  32933

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--126
20
2.1
20
82
4
50
9
27
44
18
1.80
557--594
13
2.9
13
96
0
67
31
15
18
34
1.92
2655--2685
15
2.1
15
93
0
53
12
22
16
48
1.80
4485--4529
21
2.1
21
84
8
56
22
20
4
53
1.63
6731--6756
13
2.0
13
100
0
52
30
15
15
38
1.88
6710--6774
32
2.0
34
90
6
107
27
12
13
46
1.79
21528--21578
19
2.7
19
96
0
93
31
11
17
39
1.86
21631--21655
13
1.9
13
100
0
50
32
16
16
36
1.90
21664--21792
52
2.5
52
96
0
240
35
18
17
27
1.94
23819--23907
32
2.8
32
75
11
92
26
16
26
29
1.97
23889--24042
56
2.7
56
81
6
148
25
18
28
26
1.98
23937--24760
28
29.5
27
73
9
348
24
17
29
28
1.97
23937--24592
56
11.7
56
80
3
604
23
17
30
28
1.97
23925--24760
56
14.9
57
78
7
592
24
17
29
27
1.98
23937--24756
169
4.9
169
78
6
731
24
17
29
28
1.97
24546--24650
53
2.0
53
84
0
138
27
17
27
27
1.97

Tables:   1

The End!