Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1794
Parameters: 2 7 7 80 10 50 1000
Length:  27282

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2681--2998
47
6.8
46
80
7
300
40
16
19
23
1.91
2681--2920
95
2.5
94
85
2
302
41
17
18
22
1.90
2681--2998
142
2.3
139
83
2
395
40
16
19
23
1.91
3076--3133
30
1.9
30
86
6
82
43
12
18
25
1.85
6440--6514
20
3.7
20
79
13
80
37
10
14
37
1.81
6539--6626
19
4.9
18
71
23
78
34
15
12
37
1.86
6560--6584
13
1.9
13
100
0
50
32
16
16
36
1.90
6540--6605
32
2.1
32
97
0
123
34
16
12
36
1.86
9004--9064
32
1.9
32
86
6
88
39
14
14
31
1.87
10679--10732
20
2.7
20
80
8
65
29
14
16
38
1.89
10771--10811
21
2.0
21
85
9
57
39
9
12
39
1.76
13305--13340
18
2.0
18
94
0
63
36
0
33
30
1.58
18399--18548
79
1.9
79
83
5
196
32
15
25
27
1.95
18425--18828
129
3.1
130
86
4
532
32
13
26
27
1.93
18508--18621
50
2.3
50
83
7
133
31
14
23
30
1.94
24360--24393
18
2.0
16
88
11
50
11
20
14
52
1.73
25297--25337
13
3.2
13
82
0
55
34
14
19
31
1.92
25459--25521
32
1.9
32
87
3
90
38
14
17
30
1.89
25626--25666
22
2.0
21
85
9
57
41
4
9
43
1.59
26688--26732
20
2.2
21
84
11
58
53
20
11
15
1.72

Tables:   1

The End!