Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1797
Parameters: 2 7 7 80 10 50 1000
Length:  32881

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1187--1217
11
2.9
11
95
4
55
93
0
6
0
0.35
1187--1215
15
2.0
15
93
6
51
96
0
3
0
0.22
2125--2194
21
3.4
19
81
15
61
52
0
2
44
1.15
2250--2286
11
3.3
11
92
3
56
40
0
0
59
0.97
4535--4599
24
2.8
21
78
17
67
40
0
1
58
1.07
4595--4649
29
2.0
27
82
7
65
52
1
1
43
1.22
4634--4693
13
5.0
13
75
22
60
65
0
0
35
0.93
16261--16316
27
2.1
27
93
0
94
26
8
19
44
1.80
18401--18431
2
15.5
2
100
0
62
51
0
0
48
1.00
20358--20404
23
2.1
22
85
14
62
48
0
2
48
1.13
20352--20409
23
2.4
25
72
21
61
46
0
1
51
1.11
21015--21056
14
3.1
14
86
3
59
42
0
0
57
0.99
21187--21234
2
24.5
2
91
4
80
47
0
2
50
1.12
22059--22098
21
1.9
21
89
0
62
45
12
32
10
1.75
23858--23882
2
12.5
2
100
0
50
48
0
0
52
1.00
25008--25070
20
3.4
19
73
22
62
63
0
0
36
0.95

Tables:   1

The End!