Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1809
Parameters: 2 7 7 80 10 50 1000
Length:  34154

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1469--1841
202
1.9
199
83
7
486
41
6
7
44
1.60
3069--3098
14
2.1
14
93
0
51
10
6
0
83
0.81
4250--4721
155
3.0
156
77
10
400
38
18
15
27
1.91
5559--5621
19
3.7
18
76
24
73
33
12
17
36
1.88
5578--5602
13
1.9
13
100
0
50
36
16
16
32
1.90
5559--5629
32
2.2
32
97
0
133
32
12
18
36
1.88
5674--5700
13
2.1
13
100
0
54
29
14
14
40
1.86
9207--9601
165
2.4
165
80
3
413
45
17
8
28
1.78
10962--11357
153
2.6
154
77
5
417
51
7
7
33
1.60
12323--12368
20
2.3
20
81
11
58
56
0
2
41
1.11
13423--13723
155
1.9
155
84
4
401
38
17
18
25
1.92
13424--13768
155
2.2
155
81
4
383
39
17
17
25
1.91
13665--14570
151
5.9
153
81
5
874
36
22
17
23
1.94
13579--14571
301
3.2
304
78
7
938
37
21
17
23
1.94
17868--17920
20
2.7
20
100
0
106
30
15
20
33
1.93
17990--18015
13
2.0
13
100
0
52
38
15
15
30
1.88
17972--18036
32
2.0
34
90
6
107
44
15
12
27
1.82
21099--21135
13
2.8
13
91
0
56
37
13
16
32
1.87
27322--27346
13
1.9
13
100
0
50
36
16
16
32
1.90
27299--27366
33
2.1
33
89
8
104
32
14
16
36
1.89

Tables:   1

The End!