Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1814
Parameters: 2 7 7 80 10 50 1000
Length:  30419

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--444
41
9.9
43
78
15
405
24
26
19
29
1.98
1--492
47
10.8
47
78
14
461
24
26
18
30
1.98
137--492
93
3.9
92
86
8
469
25
25
18
30
1.98
406--801
170
2.3
173
92
3
656
24
24
14
36
1.93
1590--1614
13
1.9
13
100
0
50
36
16
16
32
1.90
1570--1636
33
2.0
33
88
0
98
32
11
14
40
1.83
1677--1701
13
1.9
13
100
0
50
32
16
16
36
1.90
1710--1829
52
2.3
52
94
0
204
34
19
17
29
1.94
5767--5808
16
2.6
16
96
0
75
76
9
0
14
1.02
5768--5828
18
3.5
17
82
12
63
75
13
0
11
1.05
6826--6851
13
2.0
13
100
0
52
38
15
15
30
1.88
9019--9398
154
2.5
155
78
4
417
38
18
17
25
1.93
11595--11640
23
2.0
23
100
0
92
60
17
4
17
1.51
18255--18306
20
2.6
20
87
6
70
28
11
15
44
1.81
21095--21260
48
3.4
49
82
6
196
35
14
13
36
1.85
28806--28879
21
3.5
21
81
0
76
16
21
1
60
1.42

Tables:   1

The End!