Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1820
Parameters: 2 7 7 80 10 50 1000
Length:  9604

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
360--403
21
2.1
21
83
8
54
50
9
11
29
1.69
717--741
13
1.9
13
100
0
50
36
16
16
32
1.90
3909--3933
13
1.9
13
100
0
50
36
16
16
32
1.90
3996--4020
13
1.9
13
100
0
50
32
16
16
36
1.90
4925--5107
49
4.0
42
71
22
122
30
17
25
26
1.97
4925--5010
42
2.0
41
86
8
120
29
18
25
26
1.98
4967--5108
49
2.9
50
80
12
170
30
16
25
26
1.97
5126--5251
28
4.3
29
82
9
143
17
15
30
37
1.90
5293--5364
29
2.4
30
81
4
83
29
19
31
19
1.96
5293--5378
30
2.9
30
78
3
84
25
17
32
24
1.97
6760--6787
9
3.1
9
100
0
56
0
0
10
89
0.49

Tables:   1

The End!