Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1823
Parameters: 2 7 7 80 10 50 1000
Length:  21990

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
239--268
12
2.5
12
94
0
51
33
13
20
33
1.91
506--744
30
7.9
29
72
17
92
26
29
15
28
1.96
485--589
57
1.9
53
82
7
129
23
35
18
22
1.96
567--658
35
2.7
36
78
8
102
20
30
11
36
1.89
632--812
28
6.3
28
83
7
188
34
28
16
20
1.95
4772--4895
52
2.4
51
93
1
203
28
16
18
36
1.93
4772--4915
52
2.8
51
87
5
193
29
16
18
34
1.93
4904--4928
13
1.9
13
100
0
50
36
16
16
32
1.90
4969--5035
33
2.0
33
88
0
98
40
13
11
34
1.81
4991--5015
13
1.9
13
100
0
50
32
16
16
36
1.90
5958--6026
22
3.2
22
62
25
56
30
17
26
26
1.97
5834--6120
49
5.8
49
83
8
318
32
16
25
26
1.96
6141--6594
30
15.5
30
77
9
359
24
16
29
29
1.97
6125--6594
58
8.0
59
76
10
351
24
17
29
29
1.97
6125--6381
88
2.9
87
91
4
392
19
17
29
32
1.95
6416--6590
29
6.0
29
81
6
183
26
18
29
26
1.98
6187--6590
121
3.4
116
77
8
300
25
17
28
29
1.97
8032--8110
1
79.0
1
73
0
50
2
3
8
84
0.82
8032--8110
17
4.7
15
80
20
86
2
3
8
84
0.82
8032--8110
18
4.3
19
76
12
76
2
3
8
84
0.82
8032--8111
34
2.4
33
82
14
108
2
3
10
83
0.86
8068--8110
23
1.9
22
85
4
59
2
6
4
86
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17791--17817
10
2.7
10
100
0
54
77
22
0
0
0.76
21887--21990
51
2.1
50
94
1
181
30
17
18
33
1.94

Tables:   1

The End!