Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1837
Parameters: 2 7 7 80 10 50 1000
Length:  37503

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
828--880
26
2.0
26
92
0
88
41
0
28
30
1.56
913--937
13
1.9
13
100
0
50
32
4
8
56
1.47
5795--5868
27
2.7
27
78
12
71
47
2
1
48
1.24
9000--9037
20
1.9
20
88
0
58
52
5
2
39
1.38
9089--9139
16
3.1
17
75
8
52
52
3
0
43
1.19
9737--9772
2
18.0
2
94
0
63
47
0
0
52
1.00
16601--16659
9
6.9
9
71
11
52
15
42
0
42
1.46
16578--16691
42
2.7
42
87
1
149
14
41
0
44
1.44
19961--19994
17
1.9
17
88
5
50
79
0
14
5
0.91
19962--20009
23
2.1
23
84
7
62
81
2
10
6
0.95
20803--20875
36
2.0
36
100
0
146
47
2
21
27
1.64
21347--21411
21
3.6
19
73
26
70
44
15
12
27
1.82
21365--21390
13
2.0
13
100
0
52
38
15
15
30
1.88
21347--21411
34
2.0
33
93
6
114
44
15
12
27
1.82
23269--23330
21
3.0
21
83
11
83
19
12
3
64
1.41
23795--23819
3
8.3
3
100
0
50
32
32
0
36
1.58
25742--25977
92
2.6
92
91
0
375
25
25
13
35
1.93
26382--26492
47
2.4
46
85
4
152
18
19
13
47
1.82
26472--26777
160
1.9
162
79
7
347
24
21
11
42
1.86
26711--26802
35
2.6
35
87
5
123
23
22
7
45
1.78
26436--26777
80
4.2
81
72
10
315
22
21
11
43
1.85
26633--26883
116
2.2
115
81
5
274
24
21
12
41
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29849--29881
16
2.0
17
94
5
59
24
0
6
69
1.10
30182--30228
9
4.8
10
78
21
55
80
0
19
0
0.70
30186--30228
10
4.6
9
81
18
52
81
0
18
0
0.69
30180--30227
18
2.6
19
83
12
64
79
0
20
0
0.74
31515--31942
144
3.0
144
91
2
650
24
18
19
36
1.95
35331--35366
17
2.1
17
90
10
56
80
2
0
16
0.83
35518--35551
13
2.6
13
85
0
50
64
0
0
35
0.94

Tables:   1

The End!