Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1841
Parameters: 2 7 7 80 10 50 1000
Length:  19442

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3157--3182
13
2.0
13
100
0
52
38
15
15
30
1.88
5729--5771
23
2.0
21
81
9
50
13
9
16
60
1.58
6675--6700
13
2.0
13
100
0
52
38
15
15
30
1.88
6657--6721
32
2.0
32
87
6
94
43
15
13
27
1.85
8249--8307
27
2.2
27
93
0
100
44
18
1
35
1.60
8269--8414
80
1.8
78
89
2
229
37
13
3
45
1.61
10547--10789
30
8.2
30
85
5
316
21
34
31
11
1.89
10587--10803
89
2.5
88
85
4
260
19
35
34
10
1.86
10594--10920
15
22.3
15
66
8
172
20
35
34
9
1.85
10785--10945
87
1.8
88
85
1
225
21
37
31
9
1.85
10786--10921
57
2.3
57
92
7
229
22
35
33
8
1.85
10786--10944
30
5.4
30
82
4
171
21
37
31
9
1.85
11279--11307
2
14.5
2
100
0
58
51
0
48
0
1.00
11705--11748
16
2.6
16
82
10
52
36
0
0
63
0.95
12198--12245
16
2.7
19
78
15
57
58
0
0
41
0.98
12198--12247
17
2.8
18
82
11
59
60
0
0
40
0.97
12211--12249
16
2.4
16
83
16
53
58
0
0
41
0.98

Tables:   1

The End!