Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1847
Parameters: 2 7 7 80 10 50 1000
Length:  28654

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5395--5436
15
2.8
16
82
10
61
50
2
16
30
1.58
8962--9116
79
2.0
80
88
3
233
30
13
27
28
1.94
8835--9086
130
2.0
127
84
2
324
34
11
24
28
1.91
11445--11496
17
2.8
18
88
11
79
40
11
17
30
1.85
11482--11620
20
5.3
29
65
30
89
40
13
19
26
1.89
11465--11693
49
4.6
49
88
4
300
41
11
20
27
1.86
12202--12504
62
4.9
62
87
1
423
30
20
25
24
1.99
12485--12627
43
3.4
41
80
4
160
37
14
23
23
1.92
12611--13064
61
7.4
61
83
4
538
27
17
27
27
1.98
12608--13064
188
2.5
183
86
4
600
27
17
28
26
1.98
14016--14045
8
3.6
8
95
4
51
0
13
0
86
0.57
14000--14047
10
5.2
9
78
12
53
2
16
0
81
0.79
15271--15322
19
2.6
21
90
6
81
36
15
15
32
1.89
15292--15468
82
2.2
82
94
0
309
35
16
16
31
1.92
17808--18034
51
4.6
50
79
12
238
29
26
12
30
1.93
17808--18036
97
2.3
101
86
5
315
29
27
12
30
1.93
17969--18299
79
4.2
78
84
4
425
26
28
15
30
1.96
18254--18326
28
2.6
28
88
0
101
23
31
20
24
1.98
18178--18406
104
2.2
106
85
2
300
25
28
16
29
1.97
18020--18568
262
2.1
263
86
2
746
26
27
15
30
1.96
18282--18593
79
3.9
79
80
4
335
26
26
15
31
1.95
18100--18472
183
2.0
185
85
3
502
25
27
16
30
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18282--18583
157
1.9
157
81
4
367
26
27
15
30
1.96
20595--20621
4
6.8
4
100
0
54
22
0
0
77
0.76

Tables:   1

The End!