Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1856
Parameters: 2 7 7 80 10 50 1000
Length:  140810

Tables:   1   

This is table  1  of  1  ( 65 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
874--915
21
2.0
21
86
4
59
59
7
2
30
1.37
1334--1374
19
2.1
20
86
13
59
48
0
4
46
1.23
2783--2845
15
4.6
13
75
14
56
63
4
0
31
1.15
3532--3590
31
1.9
31
86
6
84
50
1
0
47
1.11
3640--3894
128
2.0
129
87
6
367
54
1
2
41
1.26
7603--7672
25
2.9
23
75
10
68
64
1
0
34
1.03
7636--7680
22
2.0
23
91
4
74
60
0
2
37
1.09
8081--8166
41
2.1
43
82
8
108
40
0
1
58
1.06
9794--9845
2
26.0
2
100
0
104
50
0
0
50
1.00
11721--11766
21
2.2
21
85
14
60
23
6
2
67
1.25
14427--14462
2
18.0
2
100
0
72
50
0
0
50
1.00
16989--17019
2
15.5
2
100
0
62
48
0
0
51
1.00
18244--18291
2
24.0
2
95
0
87
50
2
0
47
1.12
21430--21476
7
6.6
7
81
13
51
48
0
0
51
1.00
21670--21725
3
18.7
3
100
0
112
67
0
0
32
0.91
21867--21918
2
26.0
2
100
0
104
50
0
0
50
1.00
22206--22234
4
7.2
4
100
0
58
24
0
0
75
0.80
23533--23562
2
15.0
2
100
0
60
50
0
0
50
1.00
26168--26216
20
2.6
18
78
15
55
71
2
2
24
1.07
26168--26217
19
2.7
17
80
17
55
70
2
2
26
1.09
28677--28713
10
3.6
10
88
3
56
75
8
0
16
1.02
37041--37175
38
3.6
37
78
8
128
29
30
12
27
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41721--41867
76
1.9
76
88
0
222
31
29
10
27
1.91
41706--41867
38
4.3
38
84
0
198
30
29
11
28
1.92
43741--43767
2
13.5
2
100
0
54
48
0
0
51
1.00
43767--43797
2
15.5
2
100
0
62
0
0
48
51
1.00
45607--45635
13
2.1
14
93
6
51
17
6
10
65
1.44
47302--47326
13
1.9
13
100
0
50
24
4
0
72
1.02
47754--47782
9
3.3
9
95
4
51
20
0
0
79
0.74
49604--49629
2
13.0
2
100
0
52
50
0
0
50
1.00
57088--57130
14
3.1
14
86
0
59
32
4
0
62
1.15
57091--57129
19
2.1
19
85
9
53
33
5
0
61
1.18
57065--57116
26
2.0
25
82
17
63
32
7
1
57
1.38
66178--66210
2
16.5
2
93
0
57
48
0
3
48
1.17
69510--69567
12
4.7
12
76
19
57
25
3
1
68
1.14
70965--70992
2
14.0
2
100
0
56
50
0
0
50
1.00
74209--74264
21
2.7
21
94
0
103
28
12
12
46
1.78
76768--76992
72
3.1
72
99
0
441
27
13
16
42
1.85
79742--79793
22
2.3
23
71
15
54
63
9
5
21
1.45
80571--80683
59
1.9
59
83
5
149
49
7
12
30
1.67
81426--81489
4
16.2
4
76
14
62
0
26
0
73
0.84
83667--83768
37
2.7
38
77
7
109
27
16
20
35
1.94
84416--84496
31
2.6
31
78
5
83
56
1
1
40
1.15
85014--85059
20
2.2
21
88
7
76
65
4
2
28
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85365--85389
8
3.1
8
100
0
50
88
0
0
12
0.53
85370--85415
22
2.1
22
83
0
56
69
0
4
26
1.07
98970--99109
72
1.9
72
95
0
253
20
27
11
40
1.87
105322--105350
15
2.0
15
93
6
51
44
0
0
55
0.99
105881--105909
12
2.5
12
94
5
51
27
0
17
55
1.42
106144--106236
31
3.0
31
81
6
116
27
16
22
33
1.95
107925--107970
22
2.1
22
84
8
58
63
4
4
28
1.33
108009--108054
23
2.0
23
91
4
76
36
6
6
50
1.54
109077--109129
23
2.2
24
83
10
63
30
1
0
67
1.01
114702--114757
21
2.7
21
94
0
103
28
12
12
46
1.78
123713--123738
4
6.5
4
100
0
52
23
0
0
76
0.78
123902--123950
22
2.1
22
85
7
62
38
2
4
55
1.31
123914--123969
24
2.3
24
81
6
69
33
1
3
60
1.24
125241--125301
28
2.2
28
91
5
97
54
21
6
18
1.66
129820--129881
28
2.2
28
91
5
99
53
20
8
17
1.69
129828--129882
28
2.0
28
100
0
110
49
21
10
18
1.78
131286--131311
2
13.0
2
100
0
52
50
0
0
50
1.00
132260--132291
7
4.2
8
92
8
50
87
0
0
12
0.54
132261--132287
7
3.9
7
100
0
54
88
0
0
11
0.50
132870--132901
10
3.2
10
90
0
55
40
0
9
50
1.35
133076--133103
14
2.0
14
100
0
56
35
14
14
35
1.86

Tables:   1

The End!