Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1859
Parameters: 2 7 7 80 10 50 1000
Length:  27004

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2166--2216
16
3.3
16
75
24
56
37
0
1
60
1.08
3885--3923
21
1.9
19
85
10
51
53
0
2
43
1.14
3913--3969
25
2.2
26
87
3
80
36
0
5
57
1.21
4177--4235
27
2.2
27
84
6
75
59
1
1
37
1.18
4202--4246
18
2.6
18
86
10
58
57
0
0
42
0.98
5612--5649
3
12.7
3
100
0
76
65
0
34
0
0.93
6935--6987
16
3.5
15
73
17
56
45
0
0
54
0.99
7007--7058
16
3.0
18
77
11
63
55
0
0
44
0.99
7669--7730
8
8.1
8
72
22
53
37
0
1
61
1.06
7674--7728
30
1.9
29
85
10
78
38
0
0
61
0.96
14563--14592
16
1.9
16
93
6
53
50
0
0
50
1.00
15898--15931
16
2.2
16
89
5
52
23
2
0
73
0.97
16508--16593
17
4.9
17
65
24
54
65
1
1
32
1.08
24714--24748
2
17.5
2
100
0
70
48
0
0
51
1.00
25422--25467
22
2.1
22
83
0
56
58
2
0
39
1.10

Tables:   1

The End!