Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1868
Parameters: 2 7 7 80 10 50 1000
Length:  49153

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3732--3850
42
2.8
42
90
0
184
8
45
2
43
1.47
3756--3841
24
3.8
24
69
17
76
10
44
2
43
1.51
6002--6168
88
1.9
88
88
0
253
43
13
19
23
1.86
5976--6184
88
2.4
88
83
0
247
45
13
19
21
1.84
6015--6207
88
2.2
89
83
2
237
46
13
18
21
1.84
9458--9493
8
4.5
8
85
0
54
83
0
0
16
0.65
9461--9485
13
1.9
13
100
0
50
80
0
0
20
0.72
9904--9958
20
2.8
20
88
0
83
32
10
14
41
1.81
19763--20213
150
3.0
149
79
7
419
38
19
17
25
1.93
22309--22841
168
3.2
167
84
1
665
47
9
11
31
1.72
24313--24473
81
2.0
80
97
1
304
34
24
11
29
1.91
25589--25853
34
7.7
33
78
14
200
33
28
15
22
1.95
25828--25924
29
3.5
29
79
13
96
32
30
17
18
1.94
26306--26359
18
2.8
21
78
16
62
38
16
14
29
1.89
27519--27572
28
1.9
28
82
14
67
12
16
7
62
1.51
36256--36374
42
2.8
42
92
0
193
8
46
2
42
1.47
36289--36364
12
6.9
11
75
15
52
9
48
2
39
1.49
36280--36365
24
3.8
24
72
17
85
10
45
2
41
1.51
36271--36341
18
3.6
18
69
20
52
9
43
2
43
1.52
42577--42601
12
2.1
12
100
0
50
36
8
24
32
1.84
48968--49082
42
2.8
41
87
2
158
9
43
2
44
1.50

Tables:   1

The End!