Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1877
Parameters: 2 7 7 80 10 50 1000
Length:  187756

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
172828--172879
16
3.2
17
76
17
65
51
0
0
48
1.00
172793--172882
32
2.8
32
76
8
85
52
2
0
45
1.13
173133--173157
13
1.9
13
100
0
50
56
4
0
40
1.18
173838--173864
13
2.1
13
100
0
54
81
0
0
18
0.69
176233--176269
2
18.5
2
100
0
74
48
0
0
51
1.00
177536--177583
25
2.0
23
88
11
71
39
0
0
60
0.97
177546--177592
12
3.8
12
82
2
58
34
0
0
65
0.93
177831--178025
95
2.0
98
88
5
290
42
8
10
38
1.70
178704--178750
22
2.2
21
85
7
60
40
2
0
57
1.11
179807--179850
22
2.0
23
86
4
63
43
4
2
50
1.35
179808--179876
30
2.3
29
87
4
102
46
4
2
46
1.37
180116--180187
33
2.1
35
89
5
112
48
2
4
44
1.36
180116--180197
33
2.5
33
84
7
96
52
2
3
41
1.32
180116--180200
34
2.5
33
84
5
100
51
2
4
41
1.35
180928--180971
23
2.0
22
82
13
54
45
0
0
54
0.99
182594--182628
14
2.5
14
85
0
52
0
14
2
82
0.77
183784--183819
15
2.5
15
90
4
56
30
5
13
50
1.65
184839--184918
40
2.1
38
83
9
99
68
6
0
25
1.12
184839--184911
10
7.2
10
76
16
62
68
5
0
26
1.11
185393--185425
14
2.3
15
94
5
59
42
0
0
57
0.98

Tables:   1   2

The End!