Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1881
Parameters: 2 7 7 80 10 50 1000
Length:  24430

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1102--1139
19
2.1
18
85
14
51
36
0
2
60
1.11
5181--5268
23
3.7
23
66
11
61
46
0
1
52
1.08
5232--5286
28
2.0
28
82
13
69
49
0
0
50
1.00
5899--6089
100
1.9
100
93
0
328
39
4
10
45
1.60
6718--6792
20
3.8
20
76
0
87
34
13
10
41
1.79
6718--6795
40
2.0
39
87
2
111
34
12
11
41
1.80
20761--20815
11
4.7
12
75
8
51
87
7
1
3
0.73
20761--20815
26
2.2
26
87
9
80
87
7
1
3
0.73
20761--20815
12
4.6
11
82
14
65
87
7
1
3
0.73
21998--23178
28
41.5
29
86
6
1519
28
31
17
22
1.97
21997--23178
57
20.8
57
86
5
1579
28
31
17
22
1.97
23721--23795
20
3.8
20
80
0
87
33
12
12
42
1.79
23721--23798
40
2.0
39
87
2
111
33
11
12
42
1.79

Tables:   1

The End!