Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1882
Parameters: 2 7 7 80 10 50 1000
Length:  18137

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2358--2431
24
3.1
24
72
18
82
66
0
4
29
1.10
2359--2465
47
2.3
47
82
7
121
65
3
2
28
1.24
2445--2475
11
2.8
11
95
0
53
67
0
0
32
0.91
2494--2547
27
2.0
27
82
7
65
48
7
0
44
1.31
4227--4276
19
2.6
19
79
20
59
36
2
8
54
1.42
5300--5343
23
2.0
22
81
4
52
65
11
4
18
1.40
5709--5750
2
21.0
2
100
0
84
50
0
0
50
1.00
7433--7502
24
2.8
25
85
6
81
45
24
8
21
1.79
7433--7502
25
2.8
25
87
6
90
45
24
8
21
1.79
7487--7557
27
2.6
27
88
6
99
46
23
7
22
1.76
13201--13228
2
14.0
2
100
0
56
50
0
0
50
1.00
13401--13442
21
2.0
20
82
13
50
35
0
0
64
0.94
14314--14355
17
2.5
17
88
11
61
64
0
4
30
1.14
14314--14360
16
2.7
18
81
15
55
63
0
6
29
1.19
14397--14461
24
2.8
24
73
17
64
38
1
3
56
1.24
14762--14791
4
7.5
4
92
0
51
30
0
70
0
0.88
15131--15176
14
3.3
14
77
17
51
36
2
8
52
1.45
15130--15170
16
2.7
15
88
11
57
39
2
7
51
1.43
16046--16097
27
1.9
27
88
7
79
36
1
3
57
1.28

Tables:   1

The End!