Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1884
Parameters: 2 7 7 80 10 50 1000
Length:  141591

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4870--4909
15
2.8
14
81
7
53
7
5
5
82
0.94
5534--5590
20
2.9
20
70
12
55
0
15
17
66
1.25
5584--5636
20
2.4
23
84
12
67
3
1
15
79
0.96
5595--5637
12
3.6
12
77
0
50
2
0
16
81
0.79
5734--44031
476
80.5
475
90
1
57641
35
15
18
31
1.91
5913--43699
159
238.2
156
63
14
5498
35
15
18
31
1.91
44030--48358
476
9.1
474
88
1
5971
35
14
18
31
1.91
48353--53305
476
10.4
476
90
1
7083
35
14
18
30
1.92
58281--58399
42
2.8
42
92
0
193
8
46
2
42
1.47
58314--58389
12
6.9
11
75
15
52
9
48
2
39
1.49
58305--58390
24
3.8
24
72
17
85
10
45
2
41
1.51
58296--58366
18
3.6
18
69
20
52
9
43
2
43
1.52
60017--141589
476
171.6
475
89
1
115810
35
14
19
31
1.92
75612--75662
25
2.0
25
100
0
102
60
11
15
11
1.58
76511--77174
159
4.2
154
65
17
338
34
14
19
31
1.92
83450--102224
159
118.4
157
63
16
623
34
14
19
31
1.92
106529--124278
159
111.9
156
62
15
1091
35
14
19
30
1.92

Tables:   1

The End!