Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1888
Parameters: 2 7 7 80 10 50 1000
Length:  19481

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3686--3738
2
26.5
2
100
0
106
50
0
0
49
1.00
5749--5773
2
12.5
2
100
0
50
48
0
0
52
1.00
6789--6815
2
13.5
2
100
0
54
51
0
48
0
1.00
7001--7052
20
2.6
19
84
9
59
48
0
0
51
1.00
8783--8808
13
2.0
13
100
0
52
30
15
15
38
1.88
9464--9519
29
1.9
29
92
0
94
30
30
5
33
1.80
13360--13397
15
2.5
15
91
0
58
13
21
15
50
1.78
17450--17474
12
2.1
12
100
0
50
32
16
16
36
1.90
17430--17493
31
2.0
32
88
8
96
29
15
15
39
1.89
17533--17584
20
2.7
19
87
3
68
30
17
17
34
1.93
17533--17587
19
2.8
20
88
2
76
29
16
16
38
1.90

Tables:   1

The End!