Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1894
Parameters: 2 7 7 80 10 50 1000
Length:  17372

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2946--3024
32
2.7
27
70
21
68
44
2
1
51
1.23
3463--3500
12
3.2
12
81
3
51
65
0
0
34
0.93
3453--3496
23
1.9
23
90
9
72
63
0
0
36
0.95
4581--4680
19
5.1
18
71
20
67
56
2
1
41
1.18
5283--5319
3
12.3
3
100
0
74
67
0
0
32
0.91
5582--5653
3
24.3
3
97
2
137
34
0
0
65
0.93
5741--5787
12
4.0
12
83
2
60
0
46
0
53
1.00
5741--5784
17
2.5
17
85
3
52
0
45
0
54
0.99
5952--6004
15
3.7
15
72
23
51
52
0
0
47
1.00
6782--6855
38
2.0
36
82
10
87
59
1
1
37
1.14
6833--6926
16
5.9
17
67
21
62
57
0
0
42
0.98
6816--6937
49
2.6
46
79
8
140
58
0
0
40
1.04
6817--6902
17
5.2
17
75
17
65
58
0
0
41
0.98
6843--6923
27
2.9
28
80
16
87
58
0
0
41
0.98
7425--7463
21
2.0
20
85
10
53
53
0
0
46
1.00
8402--8450
14
3.4
14
76
15
55
63
2
2
32
1.17
8705--8747
17
2.4
17
80
7
50
44
4
4
46
1.45
9414--9477
21
3.0
22
80
11
62
42
1
0
56
1.09
9479--9593
38
3.0
38
78
14
103
61
0
2
35
1.10
9545--9665
18
6.8
19
67
26
86
61
0
1
37
1.06
9483--9673
29
6.5
29
72
17
128
62
0
2
35
1.07
9537--9635
38
2.6
37
81
9
110
60
0
3
36
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9533--9697
47
3.6
46
74
14
162
61
0
1
36
1.07
9483--9734
88
2.8
87
85
7
312
60
0
1
37
1.09
9572--9688
52
2.2
54
82
11
154
62
0
0
36
1.01
9481--9680
30
6.7
30
70
19
127
62
0
2
36
1.07
9615--9737
37
3.7
35
76
20
104
60
0
0
38
1.02
9595--9741
19
7.4
19
65
20
52
59
0
0
38
1.07
9865--9898
11
3.2
10
88
12
50
2
11
0
85
0.71
16782--16865
39
2.2
39
91
0
132
27
9
17
45
1.80
17269--17307
2
19.5
2
100
0
78
48
0
0
51
1.00

Tables:   1

The End!