Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1899
Parameters: 2 7 7 80 10 50 1000
Length:  38309

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1476--1759
153
1.9
154
80
5
342
26
9
19
44
1.82
2096--2144
25
2.0
25
100
0
98
36
12
18
32
1.88
11412--11676
97
2.7
97
87
2
354
37
9
24
27
1.87
14122--14176
20
2.7
21
80
2
67
30
16
10
41
1.83
14847--14994
53
2.8
53
83
4
147
36
14
25
23
1.93
14845--15198
52
6.8
52
76
9
283
36
14
23
25
1.93
14894--15194
102
2.9
102
76
8
248
36
14
23
24
1.93
15265--15357
32
2.9
32
84
4
118
26
20
26
25
1.99
15262--15376
32
3.5
31
79
4
104
29
20
25
25
1.99
15381--15442
31
2.1
29
85
11
81
32
19
24
24
1.98
16028--16079
14
3.7
14
89
0
68
32
5
30
30
1.81
16024--16079
28
2.0
27
86
3
76
32
5
30
32
1.80
16783--16839
25
2.1
29
84
12
77
73
3
1
21
1.07
16760--16841
42
2.0
42
83
7
105
70
2
3
23
1.15
17386--17641
82
3.1
82
87
2
336
28
34
20
16
1.94
30168--30235
19
3.9
19
74
21
76
35
11
13
39
1.81
30169--30233
32
2.0
32
93
0
112
33
12
13
40
1.82
30275--30300
13
2.0
13
100
0
52
30
15
15
38
1.88
30255--30321
33
2.0
33
88
0
98
25
14
16
43
1.86
32785--32988
79
2.6
78
83
2
248
24
29
17
28
1.97
36712--36802
20
4.6
19
89
4
121
41
10
20
26
1.86
36712--36804
40
2.3
40
89
5
136
41
11
20
25
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37529--37620
37
2.5
36
84
3
121
48
11
23
15
1.78
37658--37845
61
3.1
60
87
5
254
29
19
26
23
1.98
37817--37922
51
2.0
54
89
5
164
21
19
30
28
1.98
38024--38132
54
2.0
54
90
1
173
21
19
29
30
1.97
37734--38260
210
2.6
203
90
5
792
26
19
28
25
1.99
38135--38292
60
2.6
61
83
4
194
32
18
26
22
1.97

Tables:   1

The End!