Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1901
Parameters: 2 7 7 80 10 50 1000
Length:  22260

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--63
16
2.7
16
81
7
50
63
0
9
26
1.25
6022--6100
35
2.2
36
77
18
85
32
1
3
62
1.21
6354--6384
12
2.5
12
94
5
53
0
25
0
74
0.82
6959--6994
2
18.0
2
94
0
63
47
2
0
50
1.15
8301--8369
30
2.3
30
89
2
102
53
0
2
43
1.15
8544--8584
16
2.6
16
100
0
82
43
14
4
36
1.67
8639--8693
22
2.5
22
84
3
74
50
1
5
41
1.36
8752--8819
23
2.8
23
80
17
75
66
0
0
33
0.92
8747--8831
32
2.6
31
82
10
100
65
1
0
32
1.00
8755--8828
38
2.0
37
82
12
89
66
0
0
33
0.92
14296--14325
2
15.0
2
100
0
60
50
0
0
50
1.00
14675--14735
23
2.6
23
80
12
70
70
1
0
27
0.97
14658--14805
44
3.4
43
72
13
117
64
0
0
35
0.99
14746--14795
17
3.1
17
77
11
68
58
0
0
42
0.98
14729--14806
32
2.3
35
86
10
117
60
0
0
39
0.97
14763--14816
26
2.0
28
82
10
69
55
0
0
44
0.99
14666--14838
61
2.8
63
74
11
144
64
0
0
35
0.98
15136--15178
2
21.5
2
95
0
77
51
0
0
48
1.00
18503--19026
193
2.7
193
94
1
881
30
12
12
45
1.78
21988--22040
2
26.5
2
77
7
54
43
5
0
50
1.25

Tables:   1

The End!