Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1903
Parameters: 2 7 7 80 10 50 1000
Length:  54939

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6557--6603
17
3.0
16
85
11
62
55
0
0
44
0.99
7599--7635
2
19.0
2
94
5
67
51
0
0
48
1.00
7897--7989
28
3.5
26
77
20
86
41
2
2
53
1.25
7907--7970
26
2.4
27
80
15
80
45
1
3
50
1.27
8172--8201
14
2.1
14
93
0
51
33
0
0
66
0.92
11762--11813
2
26.0
2
100
0
104
50
0
0
50
1.00
14521--14569
20
2.3
22
79
6
57
59
2
0
38
1.09
16182--16291
54
2.0
54
100
0
220
30
18
14
36
1.91
24999--25095
47
2.1
47
84
0
122
36
4
2
57
1.29
26551--26628
24
3.3
24
77
12
72
44
1
1
52
1.17
27368--27406
16
2.6
14
88
8
51
56
0
0
43
0.99
28651--28709
21
2.8
21
79
5
57
37
22
3
37
1.71
30679--30720
20
2.0
21
90
4
68
61
0
7
30
1.22
30702--30762
25
2.4
25
91
0
104
59
4
6
29
1.44
34020--34129
21
5.2
21
92
0
166
31
20
12
35
1.90
35535--35595
25
2.7
22
80
12
70
62
1
0
36
1.05
35535--35593
23
2.5
25
75
20
65
61
1
0
37
1.07
35753--35805
11
5.2
11
77
18
53
54
0
1
43
1.11
35744--35805
20
3.0
22
81
9
69
56
0
1
41
1.09
40738--40922
94
2.0
94
79
2
201
34
16
17
32
1.92

Tables:   1

The End!