Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1904
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 385494
ACGTcount: A:0.31, C:0.18, G:0.17, T:0.34
File 2 of 2
Found at i:191425 original size:16 final size:16
Alignment explanation
Indices: 191404--191436 Score: 66
Period size: 16 Copynumber: 2.1 Consensus size: 16
191394 TCTTTATTCA
191404 TTTTGTGATTAAGCAG
1 TTTTGTGATTAAGCAG
191420 TTTTGTGATTAAGCAG
1 TTTTGTGATTAAGCAG
191436 T
1 T
191437 ATAAATACTT
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 17 1.00
ACGTcount: A:0.24, C:0.06, G:0.24, T:0.45
Consensus pattern (16 bp):
TTTTGTGATTAAGCAG
Found at i:192503 original size:159 final size:156
Alignment explanation
Indices: 192243--192575 Score: 420
Period size: 159 Copynumber: 2.1 Consensus size: 156
192233 AACATAGTCT
* * *
192243 TCTCATTAGGATACAATG-TATTGAA-GCTTTGGTTTCGCAGGAAAGGCTTTTTTCCCACCAACT
1 TCTCATTAGGATA-AATGAAATT-AATGCTTTGGTTTCACAAGAAAGGCTTTTTTCCCACCAACT
* * *
192306 TGTAAAGTCTAAGTTCAAGCCTCAAATGAGACAAACATGGATTCTAGTAATAATCTTCATTAATT
64 TGTAAAGTCTAAGTTCAAGCCGCAAATGAAACAAACATGGATTCTAGCAATAATCTTCATTAATT
* * *
192371 TTGTGATTAGGCACTATAAACGCTTTC-
129 TTGTAATTAGGAACTATAAACACTTTCA
* * *
192398 TCCTCTTTAGGATAAATGAAATTAATGCTTTGGTTTTCACAAGAAAGGCTTTTTTTCCACCGATT
1 T-CTCATTAGGATAAATGAAATTAATGCTTTGG-TTTCACAAGAAAGGCTTTTTTCCCACC-A-A
* ** * *
192463 TTTGTAAAGTCTAAGTTCGTGCCGCAAATGAAACAAACATGGATTCTAGCAATGATCTTCATTCA
62 CTTGTAAAGTCTAAGTTCAAGCCGCAAATGAAACAAACATGGATTCTAGCAATAATCTTCATTAA
* *
192528 TTTTGTAATTATGAACTATTAACACTTTCA
127 TTTTGTAATTAGGAACTATAAACACTTTCA
192558 TCTCATTAGGATAAATGA
1 TCTCATTAGGATAAATGA
192576 TATTGATGAT
Statistics
Matches: 151, Mismatches: 20, Indels: 10
0.83 0.11 0.06
Matches are distributed among these distances:
155 7 0.05
156 21 0.14
157 24 0.16
158 1 0.01
159 97 0.64
160 1 0.01
ACGTcount: A:0.32, C:0.17, G:0.16, T:0.36
Consensus pattern (156 bp):
TCTCATTAGGATAAATGAAATTAATGCTTTGGTTTCACAAGAAAGGCTTTTTTCCCACCAACTTG
TAAAGTCTAAGTTCAAGCCGCAAATGAAACAAACATGGATTCTAGCAATAATCTTCATTAATTTT
GTAATTAGGAACTATAAACACTTTCA
Found at i:193201 original size:408 final size:408
Alignment explanation
Indices: 192424--193203 Score: 1009
Period size: 408 Copynumber: 1.9 Consensus size: 408
192414 TGAAATTAAT
* * * *
192424 GCTTTGGTTTTCACAAGAAAGGCTTTTTTTCCACCGATTTTTGTAAAGTCTAAGTTCGTGCCGCA
1 GCTTTGGTTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTCGTAAAGTCTAAATTCGTGCCGCA
* * *
192489 AATGAAACAAACATGGATTCTAGCAATGATCTTCATTCATTTTGTAATTATGAACTATTAACACT
66 AATGAAACAAACATGGATTCTAGCAAGGATCTTCATTCATTTTGTAATTAGGAACTATAAACACT
* * * * *
192554 TTCATCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTT
131 TTCACCTCATTAGGATAAATGATATTGATGATTTTCGTTTACATGGAAATCTTTTCTTTACCCTA
*
192619 TTTTCTTAAAATCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAAGAGTCTCCACT
196 TTTACTTAAAATCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAAGAGTCT-CACT
* * * * **
192684 CTTTTCGAGATTGAGAACTAAGAACTCATTCTCCTCATTAGGATACATATCATTGATGCTTTAGT
260 CTTTTCAAGATTGAGAACCAAAAACACATTCTCCTCATTAGGATACATATCATTGATGAGTTAGT
* *
192749 GTCGCAAGAAAAACTTTTCTTTCAATCATTTTTGATAAAATCAAAGTCTACCTCTTATCTTCTAT
325 GTCGCAAGAAAAACTTTTCTTTCAACCATTTTCGATAAAATCAAAGTCTACCTCTTATCTTCTAT
192814 AAGGATACACGACATTGAC
390 AAGGATACACGACATTGAC
* * *
192833 GCTTTGGTTTT-ATAAGAAAGGCTTTTTTCCCATCAATTTTCGTAAAGTCTAAATTCAG-GCCTC
1 GCTTTGGTTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTCGTAAAGTCTAAATTC-GTGCCGC
* * * * * *
192896 AAATGAGACAAACGTGGATTCTAGTAAGGATCTTTATTCATTTTGTGATTAGGCACTATAAACAC
65 AAATGAAACAAACATGGATTCTAGCAAGGATCTTCATTCATTTTGTAATTAGGAACTATAAACAC
* *
192961 -TTCCCCTCATTAGGATAAATGATATTGATGATTTTCGTTTACATGTAAATCTTTTCTTTACCCT
130 TTTCACCTCATTAGGATAAATGATATTGATGATTTTCGTTTACATGGAAATCTTTTCTTTACCCT
* * * * * *
193025 AATTTACTTAAAATCAGAATTCGTCCTTTAAATATGACGAGCATTGATTCT-AGTATTAGCGTCT
195 -ATTTACTTAAAATCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCA-TA--AGAGTCT
* *
193089 -ATTCTTTTCAAGATTTG-GAACCAAAAAGACATTC-CCTTCATTAGGATACATGA-CATTGATG
256 CACTCTTTTCAAGA-TTGAGAACCAAAAACACATTCTCC-TCATTAGGATACAT-ATCATTGATG
* ** * * *
193150 AGTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTCGATAGAATCAAAGT
318 AGTTAGTGTCGCAAGAAAAACTTTTCTTTCAACCATTTTCGATAAAATCAAAGT
193204 TTCTCTCTTA
Statistics
Matches: 317, Mismatches: 46, Indels: 17
0.83 0.12 0.04
Matches are distributed among these distances:
407 61 0.19
408 234 0.74
409 16 0.05
410 6 0.02
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.37
Consensus pattern (408 bp):
GCTTTGGTTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTCGTAAAGTCTAAATTCGTGCCGCA
AATGAAACAAACATGGATTCTAGCAAGGATCTTCATTCATTTTGTAATTAGGAACTATAAACACT
TTCACCTCATTAGGATAAATGATATTGATGATTTTCGTTTACATGGAAATCTTTTCTTTACCCTA
TTTACTTAAAATCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAAGAGTCTCACTC
TTTTCAAGATTGAGAACCAAAAACACATTCTCCTCATTAGGATACATATCATTGATGAGTTAGTG
TCGCAAGAAAAACTTTTCTTTCAACCATTTTCGATAAAATCAAAGTCTACCTCTTATCTTCTATA
AGGATACACGACATTGAC
Found at i:193918 original size:475 final size:470
Alignment explanation
Indices: 192846--193932 Score: 1209
Period size: 474 Copynumber: 2.3 Consensus size: 470
192836 TTGGTTTTAT
* * *
192846 AAGAAAGGCTTTTTTCCCATCAATTTTCGTAAAGTCTAAATTCAGGCCTCAAATGAGACAAACGT
1 AAGAAAGGCTTTTTTCCCA-CAATTTT-GTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACAT
*
192911 GGATTCTAGTAAGGATCTTTATTCATTTTGTGATTAGGCACTATAAACACTTCCCCTCATTAGGA
64 GGATTCTAGTAA-GATCTTTATTCATTTTGTGATTAGGCACTATAAACACTTCTCCTCATTAGGA
** * *
192976 TAAATGATATTGATGATTTTCGTTTACATGTAAATCTTTTCTTTACCCTAATTTACTTAAAATCA
128 TAAATGATATACATGATTTTCGTTTACATGGAAATCTTTTCTTTACCCTAATTTACTTAAAATAA
* * * ** * *
193041 GAATTCGTCCTTTAAATATGACGAGCATTGATTCTAGTATTAGCGTCTATTCTTTTCAAGATTTG
193 AAATTCATCCTTTAAATATGACAAGCATCAATTCTAGTA-TAGAGTCTATTCTTTTCAAGATTAG
* ** * *
193106 GAACCAAAAAGACATTCCCTTCATTAGGATACATGACATTGATGAGTTGGTGTCGCAAGAAAAGG
257 GAACCAAAAAGACATTCCCGTCATTAAAATACATGACATTGATGAGTTGGTGTCACAAGAAAAGC
** * *
193171 TTTTCTTTCCACCGTTTTCGATAGAATCAAAGTTTCTCTCTTAATTAAGACAAACAAATAGTCAT
322 TTTTCTTTCCACCGTTTTCGATAGAATCAAAGTTTCTCTCTTAAAAAACACAAACAAATAATCAT
* ** * * * * * * *
193236 ACGAATCCCCATTTTTTTTTGGGATTAGGCACCATAAACATAGGCTTCTTAGTAGAATAGATGAT
387 ACAAATCCCCATTTCATTATAGGATAAGGCACCATAAACATACGCTTCTCAGTAGAATACAAGAT
* * * *
193301 ATTGATGCTTTGGTATCGT
452 ATTAACGATTTGGTATCGC
* * * * ** * *
193320 AAGAAAGGATTTCTTCCCCCCAATTTTTTCAAAGGGTAAGTTCGTGGCTCAAATGAGACAAACAT
1 AAGAAAGGCTTT-TTTCCCACAATTTTGT-AAAGTCTAAGTTCATGCCTCAAATGAGACAAACAT
* * * * *
193385 AGATTTTAGTAATGATCTTTATTCATTTTGTCATTAAGCACTATAAACACAATCTCCTCATTAGG
64 GGATTCTAGTAA-GATCTTTATTCATTTTGTGATTAGGCACTATAAACAC-TTCTCCTCATTAGG
* * ** *
193450 ATAAATGATA-ACATTGATTTTCTTTTGCATGGAAATCTTTTCTTTGGCCT-ATTTCCTTAAAAT
127 ATAAATGATATACA-TGATTTTCGTTTACATGGAAATCTTTTCTTTACCCTAATTTACTTAAAAT
* **
193513 AAAAAATT-ATCCTTTACATATGACAAGCATCAATTCTCA-TA-AGAGTCTTCATTCTTTTTGAG
191 -AAAAATTCATCCTTTAAATATGACAAGCATCAATTCT-AGTATAGAGTC-T-ATTCTTTTCAAG
* * * * * **
193575 ATTAGGAA-CTAAGAGCATATTCCCGTCTTTAAAATACATGACATTGTTGTTTTGGTGTCACAAG
252 ATTAGGAACCAAAAAG-ACATTCCCGTCATTAAAATACATGACATTGATGAGTTGGTGTCACAAG
* * *
193639 AAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAAAACACAAACTTGA
316 AAAAGCTTTTCTTTCCACCGTTTTCGATAGAATCAAAGTTTCTCTCTTAAAAAACACAAAC--AA
* ** * * *
193704 ATAATCGTACAAATCCTGA-TTCATTATAGGATAAGGCACCATAGACATACTCTTCTCATTA-AG
379 ATAATCATACAAATCCCCATTTCATTATAGGATAAGGCACCATAAACATACGCTTCTCAGTAGA-
* *
193767 ATACAAGGTATTAACGATTTGGTTTCGC
443 ATACAAGATATTAACGATTTGGTATCGC
193795 AAGAAAGGCTTTTTTCCCACAACCTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACAT
1 AAGAAAGGCTTTTTTCCCACAA--TTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACAT
* * *
193860 GGATTCTGGTAAGAATCTTCATTCATTTTGTGATTAGGCACTATAAACGCTTTCTCCTCATTAGG
64 GGATTCTAGTAAG-ATCTTTATTCATTTTGTGATTAGGCACTATAAACAC-TTCTCCTCATTAGG
193925 ATAAATGA
127 ATAAATGA
193933 AATTGATGCT
Statistics
Matches: 503, Mismatches: 95, Indels: 29
0.80 0.15 0.05
Matches are distributed among these distances:
472 5 0.01
473 7 0.01
474 251 0.50
475 220 0.44
476 20 0.04
ACGTcount: A:0.32, C:0.17, G:0.15, T:0.36
Consensus pattern (470 bp):
AAGAAAGGCTTTTTTCCCACAATTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGG
ATTCTAGTAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACTTCTCCTCATTAGGATAA
ATGATATACATGATTTTCGTTTACATGGAAATCTTTTCTTTACCCTAATTTACTTAAAATAAAAA
TTCATCCTTTAAATATGACAAGCATCAATTCTAGTATAGAGTCTATTCTTTTCAAGATTAGGAAC
CAAAAAGACATTCCCGTCATTAAAATACATGACATTGATGAGTTGGTGTCACAAGAAAAGCTTTT
CTTTCCACCGTTTTCGATAGAATCAAAGTTTCTCTCTTAAAAAACACAAACAAATAATCATACAA
ATCCCCATTTCATTATAGGATAAGGCACCATAAACATACGCTTCTCAGTAGAATACAAGATATTA
ACGATTTGGTATCGC
Found at i:195358 original size:475 final size:470
Alignment explanation
Indices: 194322--195420 Score: 1266
Period size: 474 Copynumber: 2.3 Consensus size: 470
194312 GATACACGAT
* * *
194322 ATTTGGTTTCACAAGAAAGGTTTTTTTCCCACCAATTGTTGTAATGTCTAAATTCATGCCTCAAA
1 ATTTGGTTTCGCAAGAAAGG-TTTTTTCCCA-CAATT-TTGTAAAGTCTAAGTTCATGCCTCAAA
* *
194387 TGAGACAAACGTGGATTCTAGTAAAGATCTTTATTCATTTTGTGATTAGGCACTATAAACACTTC
63 TGAGACAAACATGGATTCTAGT-AAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACTTC
* *** * * *
194452 CCCTCATTAGGATAAATGATATTGATGATTTTCGTTTGCATGTAAATCTTTTCTTTGCCCTATTT
127 TCCTCATTAGGATAAATGATAACAATGATTTTCGTTTACATGGAAATCTTTTCGTTGCCCTATTT
* * * * * * **
194517 TACTTAAAACTAGAATTCATCCTTTAAATATGACGAGCATCGATTCTAGTATTAGCCTCTATTTT
192 TACTTAAAACAAAAATTCATCCTTTAAATAGGACAAGCATCAATTCTAGAAGGAGCCTCTATTTT
* * * *
194582 TTTCAAGATTTGGAACCTATAACACATTCCCTTCATTAGGATACATGACATTGATGATTTGGTGT
257 TTTCAAGATTAGGAACCTAGAACACATTCCCGTCATTAGAATACATGACATTGATGATTTGGTGT
* * ** *
194647 CGCAAAAAAAGGTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTCTCTATTAATTAAGACAA
322 CACAAAAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTCTCTATTAAAAAACACAA
* * ** * * * * *
194712 ACAAATAGTCATACGAATCCCCATTTTTTTTGGGGATTAGGCACCATAAACATAGTCTTCTCAGT
387 ACAAATAATCATACAAATCCCCATTCATTATGAGGATAAGGCAACATAAACATACTCTTCTCAGT
* * * *
194777 AGAATAGATGATATTGATG
452 AGAATACAAGATATTAACG
* * * * * * *
194796 CTTTGGTATCGTAAGAAAGGTTTTCTTCCCCCCAATTTTTTCAAAGTGTAAGTTCGTGCCTCAAA
1 ATTTGGTTTCGCAAGAAAGGTTTT-TT-CCCACAATTTTGT-AAAGTCTAAGTTCATGCCTCAAA
* * * * *
194861 TGAGACAAATATAGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAAGCACTATAAACACAAT
63 TGAGACAAACATGGATTCTAGTAA-GATCTTCATTCATTTTGTGATTAGGCACTATAAACAC-TT
* * *
194926 CTCCTCATTAGGATAAATGATAACAATTATTTTCTTTTACATGGAAATCTTTTCGTTGGCCTA-T
126 CTCCTCATTAGGATAAATGATAACAATGATTTTCGTTTACATGGAAATCTTTTCGTTGCCCTATT
* * *
194990 TTCCTTAAAATCAAAAATT-ATCCTTTACATAGGACAAGCATCAATTCTCA-AAGGAGTCT-TCA
191 TTACTTAAAA-CAAAAATTCATCCTTTAAATAGGACAAGCATCAATTCT-AGAAGGAGCCTCT-A
195052 TTCTTTTT-AAGATTAGGAA-CTAAGAACACATTCCCGTCATTAGAATACATGACATT-ATTG-T
253 TT-TTTTTCAAGATTAGGAACCT-AGAACACATTCCCGTCATTAGAATACATGACATTGA-TGAT
* * * * *
195113 TTCGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
315 TT-GGTGTCACAAAAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTCTCTATTAAA
*
195178 AAACACAAACTTGAAA-AATCATACAAATCCCGATTCATTAT-AGGATAAGGCAACATAAACATA
379 AAACACAAAC---AAATAATCATACAAATCCCCATTCATTATGAGGATAAGGCAACATAAACATA
* *
195241 CTCTTCTCATTA-AGATACAAGGTATTAACG
441 CTCTTCTCAGTAGA-ATACAAGATATTAACG
195271 ATTTGGTTTCGCAAGAAAGGCTTTTTTCCCACAACCTTTTGTAAAGTCTAAGTTCATGCCTCAAA
1 ATTTGGTTTCGCAAGAAAGG-TTTTTTCCCACAA--TTTTGTAAAGTCTAAGTTCATGCCTCAAA
*
195336 TGAGACAAACATGGATTCTAGTAAGAATCTTCATTCATTTTGTGATTAGGCACTATAAACGCTTT
63 TGAGACAAACATGGATTCTAGTAAG-ATCTTCATTCATTTTGTGATTAGGCACTATAAACAC-TT
*
195401 CTCTTCATTAGGATAAATGA
126 CTCCTCATTAGGATAAATGA
195421 AATTGATGCT
Statistics
Matches: 522, Mismatches: 83, Indels: 39
0.81 0.13 0.06
Matches are distributed among these distances:
473 16 0.03
474 251 0.48
475 224 0.43
476 28 0.05
477 3 0.01
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (470 bp):
ATTTGGTTTCGCAAGAAAGGTTTTTTCCCACAATTTTGTAAAGTCTAAGTTCATGCCTCAAATGA
GACAAACATGGATTCTAGTAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACTTCTCCT
CATTAGGATAAATGATAACAATGATTTTCGTTTACATGGAAATCTTTTCGTTGCCCTATTTTACT
TAAAACAAAAATTCATCCTTTAAATAGGACAAGCATCAATTCTAGAAGGAGCCTCTATTTTTTTC
AAGATTAGGAACCTAGAACACATTCCCGTCATTAGAATACATGACATTGATGATTTGGTGTCACA
AAAAAAGCTTTTCTTTCCACCGTTTTCGATAAAATCAAAGTTTCTCTATTAAAAAACACAAACAA
ATAATCATACAAATCCCCATTCATTATGAGGATAAGGCAACATAAACATACTCTTCTCAGTAGAA
TACAAGATATTAACG
Found at i:195395 original size:158 final size:160
Alignment explanation
Indices: 195232--195555 Score: 367
Period size: 159 Copynumber: 2.0 Consensus size: 160
195222 ATAAGGCAAC
** *
195232 ATAAACATACTCT-TC-TCATTAAGATACAA-GGTATTAACGATTTGG-TTTCGCAAGAAAGGCT
1 ATAAACA-ACTCTCTCTTCATTAAGATA-AATGAAATTAACGATTTGGTTTTCACAAGAAAGGCT
* *
195293 TTTTTCCCA-CAACCTTTTGTAAAGTCTAAGTTCATGCCT-CAAATGAGACAAACATGGATTCTA
64 TTCTTCCCACCAA-CTTTTGTAAAGTCTAAGTTCATG-CTGCAAATAAGACAAACATGGATTCTA
* * *
195356 GTAA-GAATCTTCATTCATTTTGTGATTAGGCACT
127 GCAATG-ATCTTCATTCATTTTGTAATTAGGAACT
* * * * * *
195390 ATAAAC-GCTTTCTCTTCATTAGGATAAATGAAATTGATGCTTTGGTTTTCACAAGAAAGGCTTT
1 ATAAACAACTCTCTCTTCATTAAGATAAATGAAATTAACGATTTGGTTTTCACAAGAAAGGCTTT
* * * * *
195454 CTTCCCACCGATTTTTTTCAAGTCTAAGTTCGTGCTGCAAATAAGACAAACATGGATTCTAGCAA
66 CTTCCCACCAACTTTTGTAAAGTCTAAGTTCATGCTGCAAATAAGACAAACATGGATTCTAGCAA
195519 TGATCTTCATTCATTTTGTAATTAGGAACT
131 TGATCTTCATTCATTTTGTAATTAGGAACT
*
195549 ATTAACA
1 ATAAACA
195556 CTTTCACCTC
Statistics
Matches: 138, Mismatches: 20, Indels: 14
0.80 0.12 0.08
Matches are distributed among these distances:
156 3 0.02
157 4 0.03
158 29 0.21
159 99 0.72
160 3 0.02
ACGTcount: A:0.32, C:0.18, G:0.15, T:0.35
Consensus pattern (160 bp):
ATAAACAACTCTCTCTTCATTAAGATAAATGAAATTAACGATTTGGTTTTCACAAGAAAGGCTTT
CTTCCCACCAACTTTTGTAAAGTCTAAGTTCATGCTGCAAATAAGACAAACATGGATTCTAGCAA
TGATCTTCATTCATTTTGTAATTAGGAACT
Found at i:195501 original size:159 final size:158
Alignment explanation
Indices: 195272--195587 Score: 422
Period size: 159 Copynumber: 2.0 Consensus size: 158
195262 GTATTAACGA
* *
195272 TTTGGTTTCGCAAGAAAGGCTTTTTTCCCACAACCTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
1 TTTGGTTTCACAAGAAAGGCTTTCTTCCCACAACCTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
* * * * *
195337 GAGACAAACATGGATTCTAGTAA-GAATCTTCATTCATTTTGTGATTAGGCACTATAAACGCTTT
66 AAGACAAACATGGATTCTAGCAATG-ATCTTCATTCATTTTGTAATTAGGAACTATAAACACTTT
* * *
195401 CTCTTCATTAGGATAAATGAAATTGATGC
130 CACCTCATTAGGAGAAATGAAATTGATGC
* * * * *
195430 TTTGGTTTTCACAAGAAAGGCTTTCTTCCCACCGA-TTTTTTTCAAGTCTAAGTTCGTG-CTGCA
1 TTTGG-TTTCACAAGAAAGGCTTTCTTCCCA-CAACCTTTTGTAAAGTCTAAGTTCATGCCT-CA
*
195493 AATAAGACAAACATGGATTCTAGCAATGATCTTCATTCATTTTGTAATTAGGAACTATTAACACT
63 AATAAGACAAACATGGATTCTAGCAATGATCTTCATTCATTTTGTAATTAGGAACTATAAACACT
*
195558 TTCACCTCATTAGGAGAAATGATATTGATG
128 TTCACCTCATTAGGAGAAATGAAATTGATG
195588 ATTTTCTTTT
Statistics
Matches: 137, Mismatches: 17, Indels: 7
0.85 0.11 0.04
Matches are distributed among these distances:
158 7 0.05
159 127 0.93
160 3 0.02
ACGTcount: A:0.30, C:0.18, G:0.16, T:0.36
Consensus pattern (158 bp):
TTTGGTTTCACAAGAAAGGCTTTCTTCCCACAACCTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
AAGACAAACATGGATTCTAGCAATGATCTTCATTCATTTTGTAATTAGGAACTATAAACACTTTC
ACCTCATTAGGAGAAATGAAATTGATGC
Found at i:196203 original size:407 final size:408
Alignment explanation
Indices: 195422--196203 Score: 1056
Period size: 407 Copynumber: 1.9 Consensus size: 408
195412 GATAAATGAA
* * * * * * *
195422 ATTGATGCTTTGGTTTTCACAAGAAAGGCTTTCTTCCCACCGATTTTTTTCAAGTCTAAGTTCGT
1 ATTGACGCCTTGGTTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAATTCAT
* * * *
195487 GCTGCAAATAAGACAAACATGGATTCTAGCAATGATCTTCATTCATTTTGTAATTAGGAACTATT
66 GCTGCAAATAAGACAAACATGGATTCTAGCAAGGATATTCATCCATTTTGTAATTAGGAACTATA
* *
195552 AACACTTTCACCTCATTAGGAGAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT
131 AACACTTTCACCTCATTAGGAGAAATGATATTGATGATTCTCGTTTGCATGGAAATCTTTTCTTT
* * * *
195617 GCCCTTTTTGTTAAAATCATAATTCATCCCTTAAATAGGACAAGCATCGATTCTCATAAGAGTCT
196 GCCCTTTTTCTTAAAATCAAAATTCATCCCTTAAATAGGACAAGCATCAATTCTCATAAGAGCCT
* * *
195682 CCACTCTTTTCGAGATTGGGAACTAAAAACACATTCTCCTCATTAGGATACATAACATTGATGCT
261 CCACTCTTTTCAAGATTGGGAACCAAAAACACATTCTCCTCATTAGGATACATAACATTGATGAT
*
195747 TTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAAAATCAAAGTCTACCTCTTATCT
326 TTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTCGATAAAATCAAAGTCTACCTCTTATCT
195812 TCTATAAGGATACACGAT
391 TCTATAAGGATACACGAT
*
195830 ATTGACGCCTTGG-TTTCACAAGAAAGGCTTT-TTCCCATCAATTTTTGTAAAGTCTAAATTCAT
1 ATTGACGCCTTGGTTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAATTCAT
* ** * * * *
195893 GCCT-CAAATAAGGCAAATGTGGATTCTAGTAAGGATATTTATCCATTTTGTGATTAGGCACTAT
66 G-CTGCAAATAAGACAAACATGGATTCTAGCAAGGATATTCATCCATTTTGTAATTAGGAACTAT
* * *
195957 AAACAC-TTC-CCTTCATTAGGATAAATGATATTGATGATTCTCGTTTGCATGTAAATTTTTTCT
130 AAACACTTTCACC-TCATTAGGAGAAATGATATTGATGATTCTCGTTTGCATGGAAATCTTTTCT
* * **
196020 TTGCCCTATTTTACTTAAAATCAAAATTCATCCTTTAAATATGACAAGCATCAATTCT-AGTATT
194 TTGCCCT-TTTT-CTTAAAATCAAAATTCATCCCTTAAATAGGACAAGCATCAATTCTCA-TAAG
* * * * * *
196084 AGCCTCTATTCTTTTCAAGATTTGGAACCAAGAACACATTC-CTTTCATTAGGATACATGACATT
256 AGCCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCTC-CTCATTAGGATACATAACATT
* * *
196148 GATGATTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTCGATAGAATCAAA
320 GATGATTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTCGATAAAATCAAA
196204 ATTTCTCTCT
Statistics
Matches: 323, Mismatches: 45, Indels: 13
0.85 0.12 0.03
Matches are distributed among these distances:
404 2 0.01
405 56 0.17
406 88 0.27
407 166 0.51
408 11 0.03
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.37
Consensus pattern (408 bp):
ATTGACGCCTTGGTTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAATTCAT
GCTGCAAATAAGACAAACATGGATTCTAGCAAGGATATTCATCCATTTTGTAATTAGGAACTATA
AACACTTTCACCTCATTAGGAGAAATGATATTGATGATTCTCGTTTGCATGGAAATCTTTTCTTT
GCCCTTTTTCTTAAAATCAAAATTCATCCCTTAAATAGGACAAGCATCAATTCTCATAAGAGCCT
CCACTCTTTTCAAGATTGGGAACCAAAAACACATTCTCCTCATTAGGATACATAACATTGATGAT
TTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTCGATAAAATCAAAGTCTACCTCTTATCT
TCTATAAGGATACACGAT
Found at i:196899 original size:158 final size:159
Alignment explanation
Indices: 196726--197062 Score: 342
Period size: 159 Copynumber: 2.1 Consensus size: 159
196716 ACTAATCCCG
* * * **
196726 ATTCATTATAGGATTAGGCACCATAAACA-TAGTCTTCTCATTAAGATACAA-GGTATTAACGAT
1 ATTCATTTTATGATTAGGCACCATAAACAGT-GTCTCCTCATTAAGATA-AACGAAATTAACGAT
* * * * *
196789 TTGG-TTTCACAAGAAAGGCTTTTTTC-CCA-CAACCTTTTGTCAATTCTAAGTTCATGCCTCAA
64 TTGGTTTTCACAAGAAACGC-TTTCTCACCATCAA-CTTTTGTAAAGTCTAAGTTCATACCTCAA
* *
196851 TTGAGACAAACATGGATTCTAGTAAGGATCTTC
127 ATGAGACAAACATGGATTCTAGTAAGGATCATC
* ** * * * * *
196884 ATTCATTTTATGATTATGTGCTATAAACAGTTTCTCCTCATTAGGATAAACGAAATTAATGCTTT
1 ATTCATTTTATGATTAGGCACCATAAACAGTGTCTCCTCATTAAGATAAACGAAATTAACGATTT
** * * * *
196949 GGTTTTTGCAAGAAACGCTTTCTCACCATCGATTTTTGTAAAGTCTATGTTCGTACCTCAAATGA
66 GGTTTTCACAAGAAACGCTTTCTCACCATCAACTTTTGTAAAGTCTAAGTTCATACCTCAAATGA
*
197014 GACAAACATGGATTCTAGTAATGATCATC
131 GACAAACATGGATTCTAGTAAGGATCATC
* *
197043 ATTCATTTTGTAATTAGGCA
1 ATTCATTTTATGATTAGGCA
197063 TTATTAACAC
Statistics
Matches: 142, Mismatches: 32, Indels: 9
0.78 0.17 0.05
Matches are distributed among these distances:
157 2 0.01
158 54 0.38
159 84 0.59
160 2 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (159 bp):
ATTCATTTTATGATTAGGCACCATAAACAGTGTCTCCTCATTAAGATAAACGAAATTAACGATTT
GGTTTTCACAAGAAACGCTTTCTCACCATCAACTTTTGTAAAGTCTAAGTTCATACCTCAAATGA
GACAAACATGGATTCTAGTAAGGATCATC
Found at i:196925 original size:475 final size:472
Alignment explanation
Indices: 195821--196933 Score: 1245
Period size: 475 Copynumber: 2.3 Consensus size: 472
195811 TTCTATAAGG
* * ** *
195821 ATACACGATATTGACGCCTTGGTTTCACAAGAAAGGC-TTTTTCCCATCAATTTTTGTAAAGTCT
1 ATACAAGATATTAACGATTTGGTTTCACAAGAAAGGCTTTTTTCCCA-CAA-TTTTGTCAAGTCT
* * * ** * * * * *
195885 AAATTCATGCCTCAAATAAGGCAAATGTGGATTCTAGTAAGGATATTTATCCATTTTGTGATTAG
64 AAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTATGATTAA
* *** * * *
195950 GCACTATAAACACTTC-CCTTCATTAGGATAAATGATATTGATGATTCTCGTTTGCATGTAAATT
129 GCACTATAAACAATTCTCC-TCATTAGGATAAATGATAACAAAGATTCTCGTTTGCATGGAAATC
**
196014 TTTTCTTTGCCCTATTTTACTTAAAATCAAAATTCATCCTTTAAATATGACAAGCATCAATTCTA
193 TTTTCTTTGCCAAATTTTACTTAAAATCAAAATTCATCCTTTAAATATGACAAGCATCAATTCTA
** * ** *
196079 GTATTAGCCTCTATTCTTTTCAAGATTTGGAACCAAGAACACATTCCTTTCATTAGGATACATGA
258 GTAAGAGCCTCTATTCTTTTCAAGATTAGGAACCAAGAACACATTCCCGTCATTAGAATACATGA
* * *
196144 CATTGATGATTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTCGATAGAATCAAAATTTC
323 CATTGATGATTTGGTGTCACAAGAAAAGCTTCTCTTTCCACCGTTTTCGATAGAATCAAAATTTC
* * * * * ** * *
196209 TCTCTTAATTAAGACAAGCAAATAGTCATACGAATCGTCATTTTTTTTTTTGGGATTAGGCACCA
388 TCTCTTAAATAACACAAACAAATAATCATACGAATCGCCA--TTTCATTATAGGATTAGGCACCA
*
196274 TATACATAGTCTTCTCAGTAGA
451 TAAACATAGTCTTCTCAGTAGA
* * * * * * * * * * * *
196296 ATAGATGATATTGATGCTTTGGTATCATAAGAAAGGCTTGCTTCCCCCCAATTTTTTCAAAGTGT
1 ATACAAGATATTAACGATTTGGTTTCACAAGAAAGGCTT-TTTTCCCACAATTTTGTC-AAGTCT
* * * *
196361 AAGTTTATACCTCAAATGAGACAAACATAGATTCTAGTAATGATCTTCATTCATTTTATGATTAA
64 AAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTATGATTAA
* * *
196426 GCACTATAAACACAATCTCCTCATTAGGATAAATGATAACAAAGATTTTCTTTTGCATGGAAATC
129 GCACTATAAACA-ATTCTCCTCATTAGGATAAATGATAACAAAGATTCTCGTTTGCATGGAAATC
* *
196491 TTTTCTTTGGCAAATTTTCCTTAAAATCAAAAATT-ATCCTTTAAATATGACAAGCATCAATTCT
193 TTTTCTTTGCCAAATTTTACTTAAAATC-AAAATTCATCCTTTAAATATGACAAGCATCAATTCT
* ** * *
196555 CA-TAAGAGACT-TCATTCTTTTTGAGATTAGGAACTAAGAACACATTCCCGTCATTAGAATA-T
257 -AGTAAGAGCCTCT-ATTCTTTTCAAGATTAGGAACCAAGAACACATTCCCGTCATTAGAATACA
* * * *
196617 TGACATTGTTGTTTTGGTGTCACAAGAAAAGCTTCTCTTTCCACCGTTTTTGATAGAATCAAAGT
320 TGACATTGATGATTTGGTGTCACAAGAAAAGCTTCTCTTTCCACCGTTTTCGATAGAATCAAAAT
* * *
196682 TTGTCTCTTAAATAACACAAACTTGAATAATCATACTAATC-CCGA-TTCATTATAGGATTAGGC
385 TTCTCTCTTAAATAACACAAAC--AAATAATCATACGAATCGCC-ATTTCATTATAGGATTAGGC
*
196745 ACCATAAACATAGTCTTCTCATTA-A
447 ACCATAAACATAGTCTTCTCAGTAGA
* *
196770 GATACAAGGTATTAACGATTTGGTTTCACAAGAAAGGCTTTTTTCCCACAACCTTTTGTCAATTC
1 -ATACAAGATATTAACGATTTGGTTTCACAAGAAAGGCTTTTTTCCCACAA--TTTTGTCAAGTC
*
196835 TAAGTTCATGCCTCAATTGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTATGATTA
63 TAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTATGATTA
* ** *
196900 TGTGCTATAAACAGTTTCTCCTCATTAGGATAAA
128 AGCACTATAAACA-ATTCTCCTCATTAGGATAAA
196934 CGAAATTAAT
Statistics
Matches: 527, Mismatches: 97, Indels: 28
0.81 0.15 0.04
Matches are distributed among these distances:
474 9 0.02
475 194 0.37
476 155 0.29
477 145 0.28
478 24 0.05
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (472 bp):
ATACAAGATATTAACGATTTGGTTTCACAAGAAAGGCTTTTTTCCCACAATTTTGTCAAGTCTAA
GTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTATGATTAAGC
ACTATAAACAATTCTCCTCATTAGGATAAATGATAACAAAGATTCTCGTTTGCATGGAAATCTTT
TCTTTGCCAAATTTTACTTAAAATCAAAATTCATCCTTTAAATATGACAAGCATCAATTCTAGTA
AGAGCCTCTATTCTTTTCAAGATTAGGAACCAAGAACACATTCCCGTCATTAGAATACATGACAT
TGATGATTTGGTGTCACAAGAAAAGCTTCTCTTTCCACCGTTTTCGATAGAATCAAAATTTCTCT
CTTAAATAACACAAACAAATAATCATACGAATCGCCATTTCATTATAGGATTAGGCACCATAAAC
ATAGTCTTCTCAGTAGA
Found at i:197902 original size:475 final size:472
Alignment explanation
Indices: 196980--201245 Score: 4098
Period size: 475 Copynumber: 9.0 Consensus size: 472
196970 CTCACCATCG
* * **
196980 ATTTTTGTAAAGTCTATGTTCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCATCAT
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC-TTTT
* * * * * *
197045 TCATTTTGTAATTAGGCATTATTAACACATTCACCTCATTAGGATAAATGATATTGATAATTTTC
65 TCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTC
* * * *
197110 TTTTGCATGGAAATATTTTCTTTGCCCTATTTTCTTTAAAATCAAAATTTATCCCTTAAATATGA
130 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTC-CTAAAATCAAAATTCATCCCTTAAATAAGA
* * * * *
197175 TAAGCATCGATTCTCATAAGAGTCTCCACTCTTTTCCAGATTGGGAACTAAGAACACATTCACC-
194 CAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAC-AAGAACACA-TC-CCT
* * * * *
197239 -TCATTAGGATACATAACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTATTTCCACCGTTTTT
256 GTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTT
* * * ** * *
197303 GGTAGAATCAAAATCTACCTTTTAAATAAGGCAAACA-GGAATAGTCATACTAATCCCCATTCTT
321 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGG-ATAGTCATACTAATCCCCATTCTT
* *
197367 CTTAGGATTCA-GCACCATAAACATAGTCTT-TTCATAACGATACA-GAATATTGATGCTTTGGT
385 TTTAGGATT-AGGCACCATAAACATAGTCTTCTT-ATAAGGATACATG-ATATTGATGCTTTGGT
* * *
197429 TTCGCAAGAAAGGCTTTTTTTCACAA
447 TTCGCAAGAAAGGCTTTTTTCCCCCA
* * * * *
197455 ATTTTTATAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGAATCTAGAAAGGATCTTCTT
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT-TT
* * * *
197520 TCATTTTGTGATTAGGCGCTATAAAAACTTTATCCTCAATAGGATAAATGATATTGATGATTTTC
65 TCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTC
* * ** * * *
197585 GTTTGCATGGGAATCTTCCCTTTACCCTATTTTCCTAAAATCAAAATTCATCCATTAAATATGAC
130 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTAAAATCAAAATTCATCCCTTAAATAAGAC
** * * *
197650 AATTATCGATTCTCGTAACAGTCTCCATTCTTTTCAAAATTGGGAATCAAGAACACAGCCCTTTT
195 AAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CAAGAACACATCCCTGTT
* * * *
197715 ATTAGGATGCATGACATTGATGCTTTGAG-ATCGCAAGAAAAGCTTTTCTTTCCATC-TTTTTCG
259 ATTAGGATACATGACATTGATGCTTTG-GTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTT-G
* * * * * * **
197778 ATAGAATCAAAGTTTATCTCTTAATTAAGAAAAAGATGGATAGTCACACTATTCCCCACACTTTT
322 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGGATAGTCATACTAATCCCCATTC-TTT
* * * * * *
197843 TTAGCATTAGACACCATAAATATAGTCTTCTTATTAGGATAGATGATATTGATGCTTTGGTATCG
386 TTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCG
* * *
197908 CAAGAAAGGCTTTCTTCCTACTA
451 CAAGAAAGGCTTTTTTCC-CCCA
* ** * * ** *
197931 GTTTTTAAAAAGTGTAAGTTCGTGCCTCCAATGAGACAAACATAAATTCTTGTAATGAT-TTTCA
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT--
* * *
197995 TTCATTTTGTAATTTA-GCACTATTAACACATTT-TCCTCATTAGGATAAGTGATATTGATGATT
64 TTCATTTTGTGA-TTAGGCACTATAAACAC-TTTCTCCTCATTAGGATAAATGATATTGATGATT
* * *
198058 TTCTTTTGCAT-TATAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAATTCATCCCTTAAAT
127 TTCTTTTGCATGGA-AATCTTTTCTTTGCCCTA-TTTTCCTAAAATCAAAATTCATCCCTTAAAT
** * * * * * * *
198122 TTGACAAGCATCGATTGTCATAAAAGTCTCTATTCATTTT-GAGAGTAGGAACTAAGAACACATT
190 AAGACAAGCATCGATTCTCGTAACAGTCTCCATTC-TTTTCAAGATTGGGAAC-AAGAACACA-T
* *
198186 CCCT-TTATTAGGATACATGACATT-ATTGTTTTGGTGTCGCAAGAAAAGGTTTTCTTTCTACCG
252 CCCTGTTATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCG
* * * *
198249 TTTTTGATAGAATCAAAGTTTGTCTC--ACAATATGACAAACTTGAATAGTCATATTAATAATCC
316 TTTTTGATAGAATCAAAGTTTGTCTCTTA-AATAAGACAAACATGGATAGTC--A-TACTAATCC
* * * * * * * * * * *
198312 TCGTTCTTTTCAAGATTAGGCACCAAAAATATTGTCTTCTCAAAAGGATAGAAGATATTGATGCT
377 CCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGCT
* *
198377 TTGGTTTGGAAAGAAAGGC---TTT--CCC-
442 TTGGTTTCGCAAGAAAGGCTTTTTTCCCCCA
* * *
198402 -------T--A----AA-TTCGTGTCTCAAATGAGACAAACATGGATTCTAGTAATGATGTTCAT
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT-TT
* * * * *
198453 TCATTTTGTGATTGGGCACTATAAACACATTCTCCTCATTAGGATAAATGACATTAATGGTTTTC
65 TCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTC
* * * * **
198518 TTTTGGATGAAAATCTTTTCATTGCCCTATTTTCCTTAAAATCAAAATCCATCCCTTAGCTAAGA
130 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC-TAAAATCAAAATTCATCCCTTAAATAAGA
* * * * *
198583 CAAGCATCGATTC-CTGTAACGGTTTACATTCTTTTTAAGATTAGGAACCAAGAACACATTCCCT
194 CAAGCATCGATTCTC-GTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CAAGAACACA-TCCCT
* * * * *
198647 -TTTTTATGAAACATGACATTGATGCTTTGGTGTCACAAGAAATA-GTTTTCTTTCCACCATTTT
256 GTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA-AGGTTTTCTTTCCACCGTTTT
* * * * * * *
198710 TTATAGAATCAAAGCTTGTCTCTTAAATAAGACAAAAAAGAGA-AGTCGTACTAATCACCAATCT
320 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG-GATAGTCATACTAATCCCCATTCT
** * * * * *
198774 TTTCCGGATTACGAACCATAAACATAGCCTTCTTAAAAGGATAC-TCAATATTGATGCTTTGGTT
384 TTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACAT-GATATTGATGCTTTGGTT
*
198838 TTGCAAGAAAGGCTTTTTTCCCCCCA
448 TCGCAAGAAAGGCTTTTTT-CCCCCA
** ** *
198864 ATTTTTGTAGTGTCTAAGTTCGCACCTCAAATGAGACAAACATGGATTCTAGTAACGATCTTTGT
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT-T
* * * * * * *
198929 TCACTTAGTGATTAGACACAATAAACAATTTCCCCTCATTTGGATAAATGATATTGATGATTTTC
65 TCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTC
* * **
198994 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCTTTCAAATCAAAATTCATCTTTTAAATAAGA
130 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTC-CTAAAATCAAAATTCATCCCTTAAATAAGA
* * * * * *
199059 CAAGCATCGATTCTCATAACAATCTCTATTCTTTCCAAGATTGGGAACCACGAACACAT-TCTCG
194 CAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CAAGAACACATCCCT-G
* *
199123 TTATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTATTTTTCCACCGTTTTT
257 TTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTT-TCTTTCCACCGTTTTT
* * * ** *
199187 TATCGAATCAAAGTTTG-CCCTTTAAATAAGACAAACATTAATAGTCATACTAATCTCCATTCTT
321 GATAGAATCAAAGTTTGTCTC-TTAAATAAGACAAACATGGATAGTCATACTAATCCCCATTCTT
* * ** *
199251 TTCAGGATTAGGCACCATAAACATAGTCTT-TTCATAAGGATACAGGATATTGACACTTTGGATA
385 TTTAGGATTAGGCACCATAAACATAGTCTTCTT-ATAAGGATACATGATATTGATGCTTTGG-TT
199315 T-GCAAGAAAGG-TTTTCTTCCCCCCA
448 TCGCAAGAAAGGCTTTT-TT-CCCCCA
* * *
199340 ATTTTTGTAAAGTCTATGTTCGTGCCGCAAAT--G----ACATGGATTCTAGTAATTATCTTTGT
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT-T
* * * * * *
199399 TCATTTTGTAATTAGACACT-TAAACAGTTTCTACTCATTAGGATAAATGATATTGAGGATTTTG
65 TCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTC
* * * *
199463 TTTTGCATGAAAATTTTTTCTTTGCCCAATTTTCTTTAAAATCAAAATTCATCCCTTAAATAAGA
130 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTC-CTAAAATCAAAATTCATCCCTTAAATAAGA
* * *
199528 CAAGCATC-AGTTCTCATAACAGTCTTCATTCTTTTCAAGATTGGGAACCAAGAACACAT-TCTC
194 CAAGCATCGA-TTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CAAGAACACATCCCT-
* * * * *
199591 GTTATTAGGATAAATGACATTGATGCTTTAGTGTCGCCAGAAAAGGTTTTCTTTCCACCATTTTG
256 GTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTT
*
199656 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAGCAGTCATACTAATCCCCATTCTT
321 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGGA-TAGTCATACTAATCCCCATTCTT
* * * *
199720 TTTAGGATTAGGCACCATAAATATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGG-TTC
385 TTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTC
* * *
199784 GTAAGAATGGCTTTCTTCCCCCCA
450 GCAAGAAAGGCTTT-TTTCCCCCA
* * *
199808 ATTTTTCTAGAGTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGT
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT-T
* * * * * * *
199873 TCATTTTGTGATTAGACCCTATAAACATTTTCCCCTCAGTAGGATAAATGATTTTTATGATTTT-
65 TCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTC
*
199937 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAAAATTCATCCCTTTAATAAGA
130 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC-TAAAATCAAAATTCATCCCTTAAATAAGA
* * * *
200002 CAAACATCGATTCTCGTAGCAGTCTCTATTCTTTTCAAGATTGGGAACTAAGAACGCACTCCC-G
194 CAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAC-AAGAACACA-TCCCTG
* * * * ** *
200066 TTATTAGGATGCATGACATTGATGCTTTGGTGTCACAAGAAATGCTTTTAATTCCAACGTTTTTG
257 TTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTG
* * * **
200131 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATAGTCATACTAATCACTTTTCTTTT
322 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGGATAGTCATACTAATCCCCATTCTTTT
* * * *
200196 TAGGATTAGGCACCATAAACATTGTCTTTCCGTA-AA-GATAC-TCGATATCGAAGCTTTGGTTT
387 TAGGATTAGGCACCATAAACATAGTC-TT-CTTATAAGGATACAT-GATATTGATGCTTTGGTTT
* * **
200258 TGCAAGAAAGACTTTCCTCCCCCTA
449 CGCAAGAAAGGCTTTTTTCCCCC-A
* * * * *
200283 ATTTTTGTAGAGTTTAAGTTCGTGCCTCTAATGAGACAACCTTGGATTCTAGTAATGATCTTGTT
1 ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT-TT
* * *
200348 T-GTTTTGTGATTAGACA-TAATAAACA-TGTTCTCCTCATTAGAATAAATGATATTGATGATTT
65 TCATTTTGTGATTAGGCACT-ATAAACACT-TTCTCCTCATTAGGATAAATGATATTGATGATTT
** * ** * * * * *
200410 TCTTTTGTGTGGAAATCTTTTCGTCACCTTATTTTCCTTAAAGTCAAAATTTATCCCTTCAACAA
128 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC-TAAAATCAAAATTCATCCCTTAAATAA
* * * * * *
200475 GATGGATA-CATAAACATATTCTAGTAACAATCTCTATTATTTTCAAGATTGGGAACTATA-AAC
192 GA--CA-AGCAT---C-GATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAC-A-AGAAC
* * * * *
200538 ATATTCCC-GTTATTAGGATACATAACGTTGATGCTTTGGTGTCGCAAGAAAAGGTTTGCCTTCC
248 ACA-TCCCTGTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCC
* * * * * **
200602 ACCTTTTTTTATAGAATCAAAGTTTATCTCTTAAAAAAGACAAACAT-GAGTAATTGTACTAATC
312 ACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGGA-TAGTCATACTAATC
* * * * * * * * *
200666 CCAATTCTTTTTCGGATTAGGCTCCATGAACATTGTCTTCTCACAAGGATACAAGATATTGATGT
376 CCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGC
** * *
200731 TTTGGTTTCATAAGAAAGGATTTCTTCCCCTCA
441 TTTGGTTTCGCAAGAAAGGCTTTTTTCCCC-CA
* * * *
200764 A-CTTTGATAGAGTCTAAGTTCGAGCCTCAAA-GAGACAAACATGGATTCTGGTAATGATCTTTG
1 ATTTTTG-TAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT-
** * * * * *
200827 TTCACCTTGTGATTAGACATTATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTT
64 TTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTT
* * * * *
200892 TTTTTGCATGAAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCTTTAACTAAG
129 CTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC-TAAAATCAAAATTCATCCCTTAAATAAG
* *
200957 ACAAGCATCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAA-AAGCACATTCCA
193 ACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CAAGAA-CACA-TCCC
* * * *
201021 T-TCATTAGGATACATGAGATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCCTTCCACCATTTT
255 TGTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTT
* * * * **
201085 TTATAGTATCAAAGTTTGTCTCTTAAAAAACACAAACAT-GAGTAGTTGTACTAATCCCCATTCT
320 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGGA-TAGTCATACTAATCCCCATTCT
* * * * **
201149 TTTTAGGATTAGGCTCCACAAACATTGTCTT-TTAATAGGGATACGCGAT-TTGATGCTTTGGTT
384 TTTTAGGATTAGGCACCATAAACATAGTCTTCTT-ATAAGGATACATGATATTGATGCTTTGGTT
* * * *
201212 TTGTAAGAAAGGCTTTCTTCCCCTA
448 TCGCAAGAAAGGCTTTTTTCCCCCA
201237 ATTTTTGTA
1 ATTTTTGTA
201246 GCCATCGTTT
Statistics
Matches: 3145, Mismatches: 516, Indels: 262
0.80 0.13 0.07
Matches are distributed among these distances:
455 73 0.02
456 14 0.00
457 253 0.08
458 26 0.01
459 2 0.00
461 3 0.00
462 1 0.00
467 1 0.00
468 45 0.01
469 316 0.10
470 49 0.02
472 3 0.00
473 13 0.00
474 578 0.18
475 598 0.19
476 540 0.17
477 154 0.05
478 81 0.03
479 15 0.00
480 39 0.01
481 338 0.11
482 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (472 bp):
ATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTTT
CATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCT
TTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTAAAATCAAAATTCATCCCTTAAATAAGACA
AGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACAAGAACACATCCCTGTTAT
TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAG
AATCAAAGTTTGTCTCTTAAATAAGACAAACATGGATAGTCATACTAATCCCCATTCTTTTTAGG
ATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
AAGGCTTTTTTCCCCCA
Found at i:200084 original size:474 final size:476
Alignment explanation
Indices: 198401--201246 Score: 3306
Period size: 474 Copynumber: 6.0 Consensus size: 476
198391 AAGGCTTTCC
* * * **
198401 CTAAATTCGTGTCTCAAATGAGACAAACATGGATTCTAGTAATGATGTTCATTCATTTTGTGATT
1 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
* * * * * * *
198466 GGGCACTATAAACACATTCTCCTCATTAGGATAAATGACATTAATGGTTTTCTTTTGGATGAAAA
66 AGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
* * *
198531 TCTTTTCATTGCCCTATTTTCCTTAAAATCAAAATCCATCCC-TTAGCTAAGACAAGCATCGATT
131 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTTA-ATAAGACAAGCATCGATT
* * * * * * * *
198595 C-CTGTAACGGTTTAC-ATTCTTTTTAAGATTAGGAACCAAGAACACATTCCCTTTTTTATGAAA
195 CTC-GTAACAGTCT-CTATTCTTTTCAAGATTGGGAACCAAGAACACATTCCCGTTATTAGGATA
*
198658 CATGACATTGATGCTTTGGTGTCACAAGAAATA-GTTTTCTTTCCACCATTTTTTATAGAATCAA
258 CATGACATTGATGCTTTGGTGTCGCAAGAAA-AGGTTTTCTTTCCACCATTTTTTATAGAATCAA
* * * * * * * ** *
198722 AGCTTGTCTCTTAAATAAGACAAAAAAGAGAAGTCGTACTAATCACCAATCTTTTCCGGATTACG
322 AGTTTGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTTAGGATTAGG
* * * * * * *
198787 AACCATAAACATAGCCTTCTTAAAAGGATACTCAATATTGATGCTTTGGTTTTGCAAGAAAGGCT
387 CACCATAAACATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCT
* *
198852 TTTTTCCCCCCAATTTTTGTAGTGT
452 TTCTTCCCCCCAATTTTTGTAGAGT
** * * *
198877 CTAAGTTCGCACCTCAAATGAGACAAACATGGATTCTAGTAACGATCTTTGTTCACTTAGTGATT
1 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
* * * * *
198942 AGACACAATAAACAATTTCCCCTCATTTGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA
66 AGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
* * *
199007 TCTTTTCTTTGCCCTATTTTCTTTCAAATCAAAATTCAT-CTTTTAAATAAGACAAGCATCGATT
131 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTT-AATAAGACAAGCATCGATT
* * * * * *
199071 CTCATAACAATCTCTATTCTTTCCAAGATTGGGAACCACGAACACATTCTCGTTATTAGGAAACA
195 CTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAGAACACATTCCCGTTATTAGGATACA
* * *
199136 TGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTATTTTTCCACCGTTTTTTATCGAATCAAAG
260 TGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTT-TCTTTCCACCATTTTTTATAGAATCAAAG
* * * * *
199200 TTTG-CCCTTTAAATAAGACAAACATTAATAGTCATACTAATCTCCATTCTTTTCAGGATTAGGC
324 TTTGTCTC-TTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTTAGGATTAGGC
* * * ** * * *
199264 ACCATAAACATAGTCTTTTCATAAGGATACAGGATATTGACACTTTGGATATGCAAGAAAGGTTT
388 ACCATAAACATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTT
*
199329 TCTTCCCCCCAATTTTTGTAAAGT
453 TCTTCCCCCCAATTTTTGTAGAGT
* * * *
199353 CTATGTTCGTGCCGCAAAT--G----ACATGGATTCTAGTAATTATCTTTGTTCATTTTGTAATT
1 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
* * * *
199412 AGACACT-TAAACAGTTTCTACTCATTAGGATAAATGATATTGAGGATTTTGTTTTGCATGAAAA
66 AGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
* * * *
199476 TTTTTTCTTTGCCCAATTTTCTTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATC-AGTT
131 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTTAATAAGACAAGCATCGA-TT
* * *
199540 CTCATAACAGTCT-TCATTCTTTTCAAGATTGGGAACCAAGAACACATTCTCGTTATTAGGATAA
195 CTCGTAACAGTCTCT-ATTCTTTTCAAGATTGGGAACCAAGAACACATTCCCGTTATTAGGATAC
* * **
199604 ATGACATTGATGCTTTAGTGTCGCCAGAAAAGGTTTTCTTTCCACCATTTTGGATAGAATCAAAG
259 ATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTTATAGAATCAAAG
*
199669 TTTGTCTCTTAAATAAGACAAACATGAGCAGTCATACTAATCCCCATTCTTTTTAGGATTAGGCA
324 TTTGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTTAGGATTAGGCA
* * * *
199734 CCATAAATATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGG-TTCGTAAGAATGGCTTT
389 CCATAAACATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT
*
199798 CTTCCCCCCAATTTTTCTAGAGT
454 CTTCCCCCCAATTTTTGTAGAGT
*
199821 CTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
1 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
* * * * * * *
199886 AGACCCTATAAACATTTTCCCCTCAGTAGGATAAATGATTTTTATGATTTT-TTTTGCATGGAAA
66 AGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
* *
199950 TCTTTTCTTTGCCCTATTTTCCATAAAATCAAAATTCATCCCTTTAATAAGACAAACATCGATTC
131 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTTAATAAGACAAGCATCGATTC
* * * * *
200015 TCGTAGCAGTCTCTATTCTTTTCAAGATTGGGAACTAAGAACGCACTCCCGTTATTAGGATGCAT
196 TCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAGAACACATTCCCGTTATTAGGATACAT
* * * ** * * *
200080 GACATTGATGCTTTGGTGTCACAAGAAATGCTTTTAATTCCAACGTTTTTGATAGAATCAAAGTT
261 GACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTTATAGAATCAAAGTT
* * * **
200145 TGTCTCTTAAATAAGACAAACAAGAATAGTCATACTAATCACTTTTCTTTTTAGGATTAGGCACC
326 TGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTTAGGATTAGGCACC
* * * * * *
200210 ATAAACATTGTCTT-TCCGTAAAGATACTCGATATCGAAGCTTTGGTTTTGCAAGAAAGACTTTC
391 ATAAACATTGTCTTCT-CATAAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTC
* *
200274 CTCCCCCTAATTTTTGTAGAGT
455 TTCCCCCCAATTTTTGTAGAGT
* * * * **
200296 TTAAGTTCGTGCCTCTAATGAGACAACCTTGGATTCTAGTAATGATC-TTGTTTGTTTTGTGATT
1 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
* ** *
200360 AGACA-TAATAAACA-TGTTCTCCTCATTAGAATAAATGATATTGATGATTTTCTTTTGTGTGGA
66 AGACACT-ATAAACACT-TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAA
* ** * * * * * *
200423 AATCTTTTCGTCACCTTATTTTCCTTAAAGTCAAAATTTATCCCTTCAACAAGATGGATA-CATA
129 AATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTTAATAAGA--CA-AGCAT-
* * * * * *
200487 AACATATTCTAGTAACAATCTCTATTATTTTCAAGATTGGGAACTATA-AACATATTCCCGTTAT
190 --C-GATTCTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACCA-AGAACACATTCCCGTTAT
* * * * *
200551 TAGGATACATAACGTTGATGCTTTGGTGTCGCAAGAAAAGGTTTGCCTTCCACCTTTTTTTATAG
251 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTTATAG
* * * ** * *
200616 AATCAAAGTTTATCTCTTAAAAAAGACAAACATGAGTAATTGTACTAATCCCAATTCTTTTTCGG
316 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTTAGG
* * * * * ***
200681 ATTAGGCTCCATGAACATTGTCTTCTCACAAGGATACAAGATATTGATGTTTTGGTTTCATAAGA
381 ATTAGGCACCATAAACATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTTGCAAGA
* * *
200746 AAGGATTTCTTCCCCTCAA-CTTTGATAGAGT
446 AAGGCTTTCTTCCCCCCAATTTTTG-TAGAGT
* * **
200777 CTAAGTTCGAGCCTCAAA-GAGACAAACATGGATTCTGGTAATGATCTTTGTTCACCTTGTGATT
1 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
* * * * *
200841 AGACATTATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTTTTTTGCATGAAAA
66 AGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
*
200906 TATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCAT-CCTTTAACTAAGACAAGCATCGATT
131 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTTAA-TAAGACAAGCATCGATT
* * * *
200970 CTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAA-AAGCACATT-CCATTCATTAGGATA
195 CTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAGAA-CACATTCCCGTT-ATTAGGATA
* * *
201033 CATGAGATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCCTTCCACCATTTTTTATAGTATCAAA
258 CATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTTATAGAATCAAA
* * **
201098 GTTTGTCTCTTAAAAAACACAAACATGAGTAGTTGTACTAATCCCCATTCTTTTTAGGATTAGGC
323 GTTTGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTTAGGATTAGGC
* * * * * * *
201163 TCCACAAACATTGTCTTTTAATAGGGATACGCGAT-TTGATGCTTTGGTTTTGTAAGAAAGGCTT
388 ACCATAAACATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTT
*
201227 TCTT-CCCCTAATTTTTGTAG
453 TCTTCCCCCCAATTTTTGTAG
201247 CCATCGTTTT
Statistics
Matches: 2009, Mismatches: 318, Indels: 89
0.83 0.13 0.04
Matches are distributed among these distances:
468 53 0.03
469 310 0.15
470 50 0.02
473 11 0.01
474 415 0.21
475 371 0.18
476 403 0.20
477 6 0.00
478 2 0.00
479 4 0.00
480 36 0.02
481 345 0.17
482 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (476 bp):
CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATT
AGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAA
TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTTAATAAGACAAGCATCGATTC
TCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAGAACACATTCCCGTTATTAGGATACAT
GACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTTATAGAATCAAAGTT
TGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTTAGGATTAGGCACC
ATAAACATTGTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCT
TCCCCCCAATTTTTGTAGAGT
Found at i:202389 original size:641 final size:641
Alignment explanation
Indices: 200600--202536 Score: 2396
Period size: 648 Copynumber: 3.0 Consensus size: 641
200590 GGTTTGCCTT
* ** * * **
200600 CCACCTTTTTTTATAGAATCAAAGTTTATCTCTTAAAAAAGACAAACATGAGTAATTGTACTAAT
1 CCACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAGTAAGACAAACATGAATAGTCATACTAAT
* * * * *
200665 CCCAATTCTTTTTCGGATTAGGCTCCATGAACATTGTCTTCTCACAAGGATACAAGATATTGATG
66 CCCAATTCTTTTTAGGATTAGGCACCATAAACATTGTCTT-T-TC-A--ATA-AAGCTATTGATG
* ** * * * *
200730 TTTTGGTTTCATAAGAAAGGATTTCTT-CCCCTCAA-CTTTGATAGAGTCTAAGTTCGAGCCTCA
125 ATTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCT-AATTTTTG-TAGAGTCTAAGTTCGTGCCACA
* * * * *
200793 AA-GAGACAAACATGGATTCTGGTAATGATCTTTGTTCACCTTGTGATTAGACATTATAAACACA
188 AATGAGACAAACATGGATTCTAGTAATGATCTTTATTCACTTTGTGATTAGGCACTATAAACACA
* *
200857 TTCTCCTCATTAAGATAAATGATATTGATGGTTTTTTTTTGCATGAAAATATTT-TCTTTGCCCT
253 TTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATATTTCT-TTTGCCCT
* * *
200921 ATTTTCCTTAAAATCAAAATTCATCCTTTAACTAAGACAAGCATCGATTCTTGTAACAGTCTCCA
317 ATTTTTCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCA
*
200986 TTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATTAGGATACATGAGATTGATGCTTTG
382 TTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTG
* * * * *
201051 GTGTCGCAAGAAAAGGTTTTCCTTCCACCATTTTTTATAGTATCAAAGTTTGTCTCTTAAAAAAC
447 GTGTCGCAAG-AAAGGTTTT-CTTCCACCGTTTTTAATAG-AACAAAGTTTGTCTCTTAAATAAG
* *
201116 ACAAACATGAGTAGTTGTACTAATCCCCATTCTTTTTAGGATTAGGCTCCACAAACATTGTCTTT
509 ACAAACATGAGTAGTTGAACTAATCCCCATTCTTTTTAGGATTAGGCTCCATAAACATTGTCTTT
* *
201181 TAATAGGGATACGCGAT-TTGATGCTTTGGTTTTGTAAGAAAGGCTTTCTT-CCCCTAATTTTTG
574 TAATAGGGATACACGATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTCTTCCCCCCAATTTTTG
201244 TAG
639 TAG
* * * * *
201247 CCATCGTTTTTGATAGAATCAAAATTTATCTCTTAAGTAAGATAATCATGAATAGTCATACTAAT
1 CCACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAGTAAGACAAACATGAATAGTCATACTAAT
* * *
201312 CCCCATTCTTTTTAGGATTAGGCACAATAAACATTGTCTTTTCATAAAGATACAAGCTATTGACG
66 CCCAATTCTTTTTAGGATTAGGCACCATAAACATTGTCTTTTC----A-ATA-AAGCTATTGATG
* * * * * * *
201377 CTTTGGTTTCGCAAGAAAGGCTTTCTTTCCCCC-AATTTTTATAAACTCTAAGTTCATACCAGAA
125 ATTTGGTTTCGCAAGAAAGGCTTTC-TTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCACAA
* * *
201441 ATGAGACAAACATGGATTAC-AGTAATGATCTTTATTCACTTAGAGATTAGGCGCTATAAACACA
189 ATGAGACAAACATGGATT-CTAGTAATGATCTTTATTCACTTTGTGATTAGGCACTATAAACACA
* * *
201505 TTCTCCTCTTTAGGAGATATGATATTGATGGTTTTCTTTTGCATGAAAATTATTTC-TTTGCCCT
253 TTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAA-TATTTCTTTTGCCCT
* * *
201569 ATTTTTCATAAAATCAAAATTCATCCCTTATATAAGACAAGCATCGATTCTTGGAACAGTCTCCA
317 ATTTTTCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCA
* * * * * *
201634 TGCTTTTAAAGATTGGGAAGCAAAAGGACATTTCATTCATTGGGATAGATGACATTGATGCTTTG
382 TTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTG
* * * * *
201699 GGGTTGCAAGGAAAGGTTTTCCTTCCAGCGTTTTGAATAGAATCAAAGTTTGTCTTTTAAATAAG
447 GTGTCGCAA-GAAAGGTTTT-CTTCCACCGTTTTTAATAGAA-CAAAGTTTGTCTCTTAAATAAG
* *
201764 ACAAACATGAGTGGTTGAACTAATCCCCATTCTTTTTAGGATTAGGCTCCATAAACATTGTCTTG
509 ACAAACATGAGTAGTTGAACTAATCCCCATTCTTTTTAGGATTAGGCTCCATAAACATTGTCTTT
* ** *
201829 TAATCGGGATACACGATATTGATGCTTTCATTTTGTAAAAAAGGCTTTCTTCCCCCCAATTTTTG
574 TAATAGGGATACACGATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTCTTCCCCCCAATTTTTG
*
201894 TGG
639 TAG
* * * *
201897 CCACCGTTTTTTATGGAATCAAAGTTTGTCTCTTAAGTACGACAAACAAGAATAGTCATACTAAT
1 CCACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAGTAAGACAAACATGAATAGTCATACTAAT
* * *
201962 CCCTATTCTTTTTAGGAATAGGCACCATAAACATAGTCTTTTC-AT-AAGCTATTGATGATTTGG
66 CCCAATTCTTTTTAGGATTAGGCACCATAAACATTGTCTTTTCAATAAAGCTATTGATGATTTGG
202025 TTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCACAAATGAGAC
131 TTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCACAAATGAGAC
* * *
202090 AAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACACTT-TCCT
196 AAACATGGATTCTAGTAATGATCTTTATTCACTTTGTGATTAGGCACTATAAACACA-TTCTCCT
* * *
202154 CATTAGGATAAATGATATTGAT-GATTTCTTTTGCATGGAAATCTTTCTTTTGCCCTATTTTTCT
260 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATATTTCTTTTGCCCTATTTTTCT
* * *
202218 TAAAATGAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAATAGTCTCTATTCTTTTC
325 TAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCATTCTTTTC
* * *
202283 AAGATTGGGAACCAAGAA-CACATTCCCGTT-ATTTGGATACATGACATTGATGCTTTGGTGTCG
390 AAGATTGGGAAGCAA-AAGCACATT-CCATTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * * *
202346 CAAGAATTATTGTTTT-TTCCACCGTTTTTAATAGACACAAAGTTTTTCTCTTAAATAGGATAAA
453 CAAGAA--A-GGTTTTCTTCCACCGTTTTTAATAGA-ACAAAGTTTGTCTCTTAAATAAGACAAA
* * * ** * * * * * * *
202410 CATTAATAG-TCATACTAATCCAAATTCATTTTAGTATTGGGCACCATAAAGATAGTCTTTTCAT
514 CATGAGTAGTTGA-ACTAATCCCCATTCTTTTTAGGATTAGGCTCCATAAACATTGTCTTTTAAT
* * *
202474 AAGGATACTCGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTA
578 AGGGATACACGATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTCTTCCCCCCAATTTTTGTA
202537 AAGTCAAAGT
Statistics
Matches: 1107, Mismatches: 158, Indels: 56
0.84 0.12 0.04
Matches are distributed among these distances:
640 10 0.01
641 291 0.26
642 146 0.13
643 7 0.01
644 2 0.00
645 1 0.00
646 1 0.00
647 144 0.13
648 355 0.32
649 41 0.04
650 109 0.10
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (641 bp):
CCACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAGTAAGACAAACATGAATAGTCATACTAAT
CCCAATTCTTTTTAGGATTAGGCACCATAAACATTGTCTTTTCAATAAAGCTATTGATGATTTGG
TTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCACAAATGAGAC
AAACATGGATTCTAGTAATGATCTTTATTCACTTTGTGATTAGGCACTATAAACACATTCTCCTC
ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATATTTCTTTTGCCCTATTTTTCTT
AAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCATTCTTTTCA
AGATTGGGAAGCAAAAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
GAAAGGTTTTCTTCCACCGTTTTTAATAGAACAAAGTTTGTCTCTTAAATAAGACAAACATGAGT
AGTTGAACTAATCCCCATTCTTTTTAGGATTAGGCTCCATAAACATTGTCTTTTAATAGGGATAC
ACGATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAG
Found at i:202782 original size:475 final size:472
Alignment explanation
Indices: 201897--203011 Score: 1398
Period size: 475 Copynumber: 2.4 Consensus size: 472
201887 ATTTTTGTGG
* * * * *
201897 CCACCGTTTTTTATGGAATCAAAGTTTGTCTCTTAAGTACGACAAACAAGAATAGTCATACTAAT
1 CCACCGTTTTTAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
*
201962 CCCTATTCTTTTTAGGAA-TAGGCACCATAAACATAGTCTTTTCATAA-G----C--TATTGATG
66 CCCAATTC-TTTTA-GAATTAGGCACCATAAACATAGTCTTTTCATAAGGATACCGATATTGATG
* * * *
202019 ATTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCACAAA
129 CTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAAAGTCAAAGTTCGTGCCACAAA
* * * * *
202084 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACACT
194 TGAGACAAACATGGATTCTAGTAATGATCTTCATTAATTTAGAGATTAGGCAATATAAACACACT
*
202149 TTCCTCATTAGGATAAATGATATTGATGATTTCTTTTGCATGGAAATCTTTCTTTTGCCCTATTT
259 TTCCTCATTAGGATAAATGATATTGATGATTTCTTTTGCATGAAAATCTTTCTTTTGCCCTATTT
* * *** * * *
202214 TTCTTAAAATGAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAATAGTCTCTATTCT
324 TCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCAAAACAGTCTCCATGCT
* * *
202279 TTTCAAGATTGGGAACCAAGAACACATTCCCGTTATTT-GGATACATGACATTGATGCTTTGGTG
389 TTTCAAGATTGGGAACCAAGAACACATT-CCATTATTTAGGATACATGACATTGATGCCTTGGAG
*
202343 TCGCAAGA-ATTATTGTTTT-TT
453 TCGCAAGAGA--A-GGTTTTCTT
* * * *
202364 CCACCGTTTTTAATAGACA-CAAAGTTTTTCTCTTAAATAGGATAAACATTAATAGTCATACTAA
1 CCACCGTTTTTAATAGA-ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * * *
202428 TCCAAATTCATTTTAGTATTGGGCACCATAAAGATAGTCTTTTCATAAGGATACTCGATATTGAT
65 TCCCAATTC-TTTTAGAATTAGGCACCATAAACATAGTCTTTTCATAAGGATAC-CGATATTGAT
* *
202493 GCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAAAGTCAAAGTTCGTGCCTCAA
128 GCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAAAGTCAAAGTTCGTGCCACAA
* *
202558 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTAATTTAGAGATTTGGCAATATAAACATA-
193 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTAATTTAGAGATTAGGCAATATAAACACAC
* *
202622 TTCTCCTCTTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTC-TTTGCCCT
258 TT-TCCTCATTAGGATAAATGATATTGAT-GATTTCTTTTGCATGAAAATC-TTTCTTTTGCCCT
* ** * *
202686 ATTTTCCTTAAAATCAAGATTCATCCCTTATTTAAGGCAAGCATGGATTCTCAAAACAGTCTCCA
320 ATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCAAAACAGTCTCCA
* *
202751 TGCTTTTCAAGATT-GGAAGCAA-AAGCACATTCCATTCTTTAGGATACATGACATTGATGCCTT
385 TGCTTTTCAAGATTGGGAACCAAGAA-CACATTCCATTATTTAGGATACATGACATTGATGCCTT
202814 GGAGTCGCAAGAGAAGGTTTTCCTT
449 GGAGTCGCAAGAGAAGGTTTT-CTT
* * * * *
202839 CCACCCTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAGTAGTCAAACTAAT
1 CCACCGTTTTTAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * * * * * * *
202904 CCCCATTCTTTTCTGAATTAGGCTCCATAAACATTGTCTTCTAATAGGGATACACGATATTGAAG
66 CCCAATTCTTTT-AGAATTAGGCACCATAAACATAGTCTTTTCATAAGGATAC-CGATATTGATG
**
202969 CTTTGGTTTCATAAGAAAGGCTTTCTTCCCCCCAATTTTTGTA
129 CTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTA
203012 GCCACCATTT
Statistics
Matches: 554, Mismatches: 74, Indels: 32
0.84 0.11 0.05
Matches are distributed among these distances:
466 2 0.00
467 93 0.17
468 2 0.00
473 6 0.01
474 17 0.03
475 336 0.61
476 94 0.17
477 4 0.01
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (472 bp):
CCACCGTTTTTAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
CCCAATTCTTTTAGAATTAGGCACCATAAACATAGTCTTTTCATAAGGATACCGATATTGATGCT
TTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAAAGTCAAAGTTCGTGCCACAAATG
AGACAAACATGGATTCTAGTAATGATCTTCATTAATTTAGAGATTAGGCAATATAAACACACTTT
CCTCATTAGGATAAATGATATTGATGATTTCTTTTGCATGAAAATCTTTCTTTTGCCCTATTTTC
CTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCAAAACAGTCTCCATGCTTT
TCAAGATTGGGAACCAAGAACACATTCCATTATTTAGGATACATGACATTGATGCCTTGGAGTCG
CAAGAGAAGGTTTTCTT
Found at i:203149 original size:174 final size:174
Alignment explanation
Indices: 202839--203186 Score: 466
Period size: 174 Copynumber: 2.0 Consensus size: 174
202829 GGTTTTCCTT
* *
202839 CCACCCTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAGTAGTCAAACTAAT
1 CCACCATTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATAGTCAAACTAAT
* ** ** * *
202904 CCCCATTCTTTTCTGAATTAGGCTCCATAAACATTGTCTTCTAATAGGGATACACGATATTGAAG
66 CCCCATTCTTTTCTGAATTAGGCACCATAAACACAGTCTTCTAATAACGATACAAGATATTGAAA
* *
202969 CTTTGGTTTCATAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAG
131 CTTTGGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTGGTAG
* * * * *
203013 CCACCATTTTTTATGGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATGAATAGTCATACTAAT
1 CCACCATTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATAGTCAAACTAAT
* * * *
203078 CCCCATTCTTTT-TAGGATTAGGCACCATAAACACAGTCTTTTCATAACGATACAAGCTATT-AA
66 CCCCATTCTTTTCT-GAATTAGGCACCATAAACACAGTCTTCTAATAACGATACAAGATATTGAA
**
203141 CACTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCCAATTTTGGTAG
130 -ACTTTGGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTGGTAG
203187 AGTCTAAGTT
Statistics
Matches: 150, Mismatches: 22, Indels: 4
0.85 0.12 0.02
Matches are distributed among these distances:
173 3 0.02
174 147 0.98
ACGTcount: A:0.31, C:0.21, G:0.14, T:0.34
Consensus pattern (174 bp):
CCACCATTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATGAATAGTCAAACTAAT
CCCCATTCTTTTCTGAATTAGGCACCATAAACACAGTCTTCTAATAACGATACAAGATATTGAAA
CTTTGGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTGGTAG
Found at i:204542 original size:20 final size:20
Alignment explanation
Indices: 204517--204570 Score: 74
Period size: 20 Copynumber: 2.7 Consensus size: 20
204507 GTTGTAAGCA
204517 ATGTATCGATACAAT-TCAT
1 ATGTATCGATACAATGTCAT
*
204536 CATGTATCGATACAATGTCCT
1 -ATGTATCGATACAATGTCAT
*
204557 ATGTGTCGATACAA
1 ATGTATCGATACAA
204571 ACAGTGGTAG
Statistics
Matches: 31, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
20 28 0.90
21 3 0.10
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.33
Consensus pattern (20 bp):
ATGTATCGATACAATGTCAT
Found at i:204656 original size:13 final size:13
Alignment explanation
Indices: 204638--204665 Score: 56
Period size: 13 Copynumber: 2.2 Consensus size: 13
204628 ATACAATGAA
204638 AATGTATCGATAC
1 AATGTATCGATAC
204651 AATGTATCGATAC
1 AATGTATCGATAC
204664 AA
1 AA
204666 AGCATAATGT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 15 1.00
ACGTcount: A:0.43, C:0.14, G:0.14, T:0.29
Consensus pattern (13 bp):
AATGTATCGATAC
Found at i:205269 original size:31 final size:31
Alignment explanation
Indices: 205232--205290 Score: 118
Period size: 31 Copynumber: 1.9 Consensus size: 31
205222 ATTGATTAAC
205232 GAGATTTTCTCATCCTAGATAAACATATAAT
1 GAGATTTTCTCATCCTAGATAAACATATAAT
205263 GAGATTTTCTCATCCTAGATAAACATAT
1 GAGATTTTCTCATCCTAGATAAACATAT
205291 TTTTCCCCCT
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
31 28 1.00
ACGTcount: A:0.37, C:0.17, G:0.10, T:0.36
Consensus pattern (31 bp):
GAGATTTTCTCATCCTAGATAAACATATAAT
Found at i:205321 original size:23 final size:22
Alignment explanation
Indices: 205289--205330 Score: 75
Period size: 22 Copynumber: 1.9 Consensus size: 22
205279 AGATAAACAT
205289 ATTTTTCCCCCTTTATCAAAGC
1 ATTTTTCCCCCTTTATCAAAGC
*
205311 ATTTTTCCCCCTTTGTCAAA
1 ATTTTTCCCCCTTTATCAAA
205331 TCAAAAAATT
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
22 19 1.00
ACGTcount: A:0.21, C:0.31, G:0.05, T:0.43
Consensus pattern (22 bp):
ATTTTTCCCCCTTTATCAAAGC
Found at i:213343 original size:33 final size:33
Alignment explanation
Indices: 213306--213368 Score: 83
Period size: 33 Copynumber: 1.9 Consensus size: 33
213296 CCGTTATAAG
*
213306 CAATGTATCGATATAAT-TCATCATGTATCGATC
1 CAATGTATCGATACAATGTCAT-ATGTATCGATC
* *
213339 CAATGTATTGATACAATGTCCTATGTATCG
1 CAATGTATCGATACAATGTCATATGTATCG
213369 TACAAATAGT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
33 23 0.88
34 3 0.12
ACGTcount: A:0.32, C:0.17, G:0.14, T:0.37
Consensus pattern (33 bp):
CAATGTATCGATACAATGTCATATGTATCGATC
Found at i:213441 original size:13 final size:13
Alignment explanation
Indices: 213423--213449 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
213413 ACAATTGTCC
213423 ATGTATCGATACA
1 ATGTATCGATACA
213436 ATGTATCGATACA
1 ATGTATCGATACA
213449 A
1 A
213450 AGCATAATGT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.41, C:0.15, G:0.15, T:0.30
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:214246 original size:174 final size:174
Alignment explanation
Indices: 213924--214264 Score: 466
Period size: 174 Copynumber: 2.0 Consensus size: 174
213914 GGTTTTCCTT
** * * *
213924 CCACCATTTTTGATATTATCAGAGTTTGTCTCTTAAATAAGATAAACATGAGTAGTCATACTAAT
1 CCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * * * **
213989 CGCCATTCTTTTTAGGATTAGGCTCCATAAACATTGTCTTCTAATAAGGATACACGATATTGGTG
66 CCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTAATAAGGATACAAGATATTGACG
* * *
214054 CTTTAGTTTTGTAAGAAAGGCTTTCTTCCTCCCAATTATTATAG
131 CTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTATTATAG
* * * *
214098 CCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACTTGAATAGTCATTCTAAT
1 CCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * * * *
214163 CCCCATTCTTTTTAGGATTAGGCACCATAAGCATAGTCTTTTCATAAGGATCCAAGCTATTGACG
66 CCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTAATAAGGATACAAGATATTGACG
*
214228 CTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATT
131 CTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATT
214265 TTTGCAGAGT
Statistics
Matches: 143, Mismatches: 24, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
174 143 1.00
ACGTcount: A:0.29, C:0.20, G:0.15, T:0.36
Consensus pattern (174 bp):
CCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
CCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTAATAAGGATACAAGATATTGACG
CTTTAGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTATTATAG
Found at i:217636 original size:52 final size:52
Alignment explanation
Indices: 217558--217686 Score: 222
Period size: 52 Copynumber: 2.5 Consensus size: 52
217548 TGAAATATAA
* *
217558 AAATTTACCTGCATGTATCGATACATTTAATGGTGTATCTATACATCTGGGC
1 AAATTTACCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
*
217610 AAATTTACCTGCATGTATCGATACATTTTATAGTGTATCGATACATCTGGGC
1 AAATTTACCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
*
217662 AAATTTGCCTGCATGTATCGATACA
1 AAATTTACCTGCATGTATCGATACA
217687 ATGTATCGAT
Statistics
Matches: 73, Mismatches: 4, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
52 73 1.00
ACGTcount: A:0.29, C:0.18, G:0.17, T:0.36
Consensus pattern (52 bp):
AAATTTACCTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGC
Found at i:217692 original size:13 final size:13
Alignment explanation
Indices: 217674--217699 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
217664 ATTTGCCTGC
217674 ATGTATCGATACA
1 ATGTATCGATACA
217687 ATGTATCGATACA
1 ATGTATCGATACA
217700 TTTGGGTAGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:217766 original size:19 final size:18
Alignment explanation
Indices: 217742--217839 Score: 90
Period size: 19 Copynumber: 5.8 Consensus size: 18
217732 TAGCTTACAT
217742 TGTATCGATACAAAACTTA
1 TGTATCGATAC-AAACTTA
217761 TGTATCGATAC--A--T-
1 TGTATCGATACAAACTTA
217774 TGTATCGATACAACACTTA
1 TGTATCGATACAA-ACTTA
217793 TGTATCGATAC--A--T-
1 TGTATCGATACAAACTTA
217806 TGTATCGATACAACACTTTA
1 TGTATCGATACAA-AC-TTA
217826 TGTATCGATACAAA
1 TGTATCGATACAAA
217840 TCGTTGAAAT
Statistics
Matches: 66, Mismatches: 0, Indels: 26
0.72 0.00 0.28
Matches are distributed among these distances:
13 22 0.33
14 2 0.03
16 4 0.06
18 1 0.02
19 24 0.36
20 13 0.20
ACGTcount: A:0.37, C:0.17, G:0.12, T:0.34
Consensus pattern (18 bp):
TGTATCGATACAAACTTA
Found at i:217778 original size:32 final size:32
Alignment explanation
Indices: 217737--217837 Score: 184
Period size: 32 Copynumber: 3.1 Consensus size: 32
217727 TGCAGTAGCT
*
217737 TACATTGTATCGATACAAAACTTATGTATCGA
1 TACATTGTATCGATACAACACTTATGTATCGA
217769 TACATTGTATCGATACAACACTTATGTATCGA
1 TACATTGTATCGATACAACACTTATGTATCGA
217801 TACATTGTATCGATACAACACTTTATGTATCGA
1 TACATTGTATCGATACAACAC-TTATGTATCGA
217834 TACA
1 TACA
217838 AATCGTTGAA
Statistics
Matches: 67, Mismatches: 1, Indels: 1
0.97 0.01 0.01
Matches are distributed among these distances:
32 52 0.78
33 15 0.22
ACGTcount: A:0.36, C:0.18, G:0.12, T:0.35
Consensus pattern (32 bp):
TACATTGTATCGATACAACACTTATGTATCGA
Found at i:217779 original size:13 final size:13
Alignment explanation
Indices: 217761--217817 Score: 60
Period size: 13 Copynumber: 3.9 Consensus size: 13
217751 ACAAAACTTA
217761 TGTATCGATACAT
1 TGTATCGATACAT
217774 TGTATCGATACAACACTT
1 TGTATCGAT---ACA--T
217792 ATGTATCGATACAT
1 -TGTATCGATACAT
217806 TGTATCGATACA
1 TGTATCGATACA
217818 ACACTTTATG
Statistics
Matches: 38, Mismatches: 0, Indels: 12
0.76 0.00 0.24
Matches are distributed among these distances:
13 21 0.55
14 1 0.03
16 6 0.16
18 1 0.03
19 9 0.24
ACGTcount: A:0.33, C:0.18, G:0.14, T:0.35
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:218462 original size:229 final size:229
Alignment explanation
Indices: 218050--218504 Score: 635
Period size: 229 Copynumber: 2.0 Consensus size: 229
218040 TTCTAGTAAT
* * *
218050 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTTTGCTCTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTA
* *
218115 ATGGTTTTCTTTTGTATGAAAATCATTTCTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCT
66 ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCG
** * *
218180 TATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAGCA
131 TATAAAAAACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAGCA
*
218245 CATTCCCTTCATTAGGATACATGACACTGATAAA
196 CATTACCTTCATTAGGATACATGACACTGATAAA
** * * *
218279 GATCTTCATTCATTTTGTGGTTAGGTACTATAAACACGTTATCCTCTTTAGGATAAATGATATTA
1 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTA
* * *
218344 ATGGTTTTCTTTTGTAAGGAAATCTTTTCTTTGCCCT-TTTTTCCTTAAAATCAAAATTCATCGC
66 ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTTT-CTTAAAATCAAAATTCATCCC
* * * ** * *
218408 GTA-AAAACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAGGATTGGGAAGCAAAAG
130 GTATAAAA-AACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAG
* *
218472 CATATTACCTTCATTAGGATACATGACATTGAT
194 CACATTACCTTCATTAGGATACATGACACTGAT
218505 TCTTTGGTGT
Statistics
Matches: 197, Mismatches: 27, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
228 7 0.04
229 190 0.96
ACGTcount: A:0.31, C:0.19, G:0.13, T:0.37
Consensus pattern (229 bp):
GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTA
ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCG
TATAAAAAACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAGCA
CATTACCTTCATTAGGATACATGACACTGATAAA
Found at i:219279 original size:469 final size:473
Alignment explanation
Indices: 218279--219447 Score: 1529
Period size: 469 Copynumber: 2.5 Consensus size: 473
218269 CACTGATAAA
* * * * *
218279 GATCTTCATTCATTTTGTGGTTAGGTACTATAAACACGTTATCCTCTTTAGGATAAATGATATTA
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
* * * *
218344 ATGGTTTTCTTTTGTAAGGAAATC-TTTTCTTTGCCCTTTTTTCCTTAAAATCAAAATTCATCGC
66 ATGGTTTTCTTTTGTATGAAAATCATTTT-TTTGCCCTATTTTCCTTAAAATCAAAATTCATCCC
* *** * *
218408 GTAAAAACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAGGATTGGGAAGCAAAAGC
130 ATATCTACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAGC
* *
218473 ATATTACCTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCA
195 ATATTACCTTCATTAGGATACATGACATTGATGCTTTGGTGTAGCAAGAAAAGGTTTTCTTTCCA
* * * *
218538 CCATTTCTGATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACAAGAATAGTATACTAATCCCC
260 CCATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAACAAGAATAGTATACTAATCCCC
* *
218603 ATTCTTTTTACGATTAGGCACCATAAACATTGTCTTTCATAAGAATACAAGATATTGATGCTTTG
325 ATTCTTTTTACGATTAAGCACCAT-AACATTCTCTTTCATAAGAATACAAGATATTGATGCTTTG
*
218668 GTATTGCAAGAAAGGCTTTCTTCCCCTCAATTTTTGTAGAGTCTATGTTCATGCCTCAAATGAGA
389 GTATTGCAAGAAAGGCTTTCTTCCCCTCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGA
218733 CAAACATGGATTCTAGTAAT
454 CAAACATGGATTCTAGTAAT
* * * *
218753 GATCTTCATTCATTTTGAGATTAGGCACTATAAACATATTCTCCTCTTCAAGATAAATGATATTG
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
*
218818 ATGGTTTTCTTTTGCATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
66 ATGGTTTTCTTTTGTATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
** * * * * * *
218883 TATCTATGATAAGCATTGATTCTCGTAATAGTCT-CTATTTTTTTCAAGATTGGGATCCAAGAA-
131 TATCTACAACAAGCATCGATTCTCGCAACAGTCTCCT-TTCTTTTCAAGATTGGGAACCAA-AAG
* * * * **
218946 CATATTTTCGTT-ATTCGGATACATGTCATTGATGCTTTGAG-GTAGCAAG-AATTGTTTT-TTT
194 CATA-TTACCTTCATTAGGATACATGACATTGATGCTTTG-GTGTAGCAAGAAAAGGTTTTCTTT
* *
219007 CCCACCGTTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAA-AATGAATTGTCATACTA
257 -CCACCATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAACAA-GAATAGT-ATACTA
* * *
219071 ATCCCCATTCTTTTTAGGATTAAGCACCAT-A-A-TCT-TTTCATATGGATACAAGATATTGATG
319 ATCCCCATTCTTTTTACGATTAAGCACCATAACATTCTCTTTCATAAGAATACAAGATATTGATG
* * *
219132 CTTTGGTTTTGCAAGAAAGGTTTTCTTCCCC-CTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAA
384 CTTTGGTATTGCAAGAAAGGCTTTCTTCCCCTC-AATTTTTGTAGAGTCTAAGTTCATGCCTCAA
219196 ATGAGACAAACATGGATTCTAGTAAT
448 ATGAGACAAACATGGATTCTAGTAAT
* * *
219222 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTTTGCTCTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
* * *
219287 ATGGTTTTCTTTTGTATGAAAATCATTTCTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCT
66 ATGGTTTTCTTTTGTATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
* * * * ** * *
219352 TATCTA-AGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAGC
131 TATCTACA-ACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAGC
* * *
219416 ACATTCCCTTCATTAGGATACATGACACTGAT
195 ATATTACCTTCATTAGGATACATGACATTGAT
219448 AAAGATCTTC
Statistics
Matches: 602, Mismatches: 80, Indels: 31
0.84 0.11 0.04
Matches are distributed among these distances:
468 8 0.01
469 293 0.49
470 3 0.00
471 1 0.00
472 6 0.01
473 56 0.09
474 223 0.37
475 12 0.02
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (473 bp):
GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
ATGGTTTTCTTTTGTATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
TATCTACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAGCA
TATTACCTTCATTAGGATACATGACATTGATGCTTTGGTGTAGCAAGAAAAGGTTTTCTTTCCAC
CATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAACAAGAATAGTATACTAATCCCCA
TTCTTTTTACGATTAAGCACCATAACATTCTCTTTCATAAGAATACAAGATATTGATGCTTTGGT
ATTGCAAGAAAGGCTTTCTTCCCCTCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACA
AACATGGATTCTAGTAAT
Found at i:219634 original size:229 final size:229
Alignment explanation
Indices: 219222--219676 Score: 635
Period size: 229 Copynumber: 2.0 Consensus size: 229
219212 TTCTAGTAAT
* * *
219222 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTTTGCTCTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTA
* *
219287 ATGGTTTTCTTTTGTATGAAAATCATTTCTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCT
66 ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCG
** * *
219352 TATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAGCA
131 TATAAAAAACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAGCA
*
219417 CATTCCCTTCATTAGGATACATGACACTGATAAA
196 CATTACCTTCATTAGGATACATGACACTGATAAA
** * * *
219451 GATCTTCATTCATTTTGTGGTTAGGTACTATAAACACGTTATCCTCTTTAGGATAAATGATATTA
1 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTA
* * *
219516 ATGGTTTTCTTTTGTAAGGAAATCTTTTCTTTGCCCT-TTTTTCCTTAAAATCAAAATTCATCGC
66 ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTTT-CTTAAAATCAAAATTCATCCC
* * * ** * *
219580 GTA-AAAACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAGGATTGGGAAGCAAAAG
130 GTATAAAA-AACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAG
* *
219644 CATATTACCTTCATTAGGATACATGACATTGAT
194 CACATTACCTTCATTAGGATACATGACACTGAT
219677 TCTTTGGTGT
Statistics
Matches: 197, Mismatches: 27, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
228 7 0.04
229 190 0.96
ACGTcount: A:0.31, C:0.19, G:0.13, T:0.37
Consensus pattern (229 bp):
GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTA
ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCG
TATAAAAAACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGGGAAGCAAAAGCA
CATTACCTTCATTAGGATACATGACACTGATAAA
Found at i:220109 original size:703 final size:698
Alignment explanation
Indices: 218753--220060 Score: 1878
Period size: 703 Copynumber: 1.9 Consensus size: 698
218743 TTCTAGTAAT
* * *
218753 GATCTTCATTCATTTTGAGATTAGGCACTATAAACATATTCTCCTCTTCAAGATAAATGATATTG
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTCAAGATAAATGATATTA
*
218818 ATGGTTTTCTTTTGCATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
66 ATGGTTTTCTTTTGCAAGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
*** ** * * * * * *
218883 TATCTATGATAAGCATTGATTCTCGTAATAGTCTCTATTTTTTTCAAGATTGGGATCCAAGAACA
131 TAAAAACAACAAGCATCGATTCTCGCAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAGAACA
* * * * **
218948 TATTTTCGTTATTCGGATACATGTCATTGATGCTTTGAGGTAGCAAGAATTGTTTTTTTCCCACC
196 TATTTACCTTATTAGGATACATGACATTGATGCTTTGAGGTAGCAAGAAAGGTTTTTTTCCCACC
* *
219013 GTTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAAAATGAATTGTCATACTAATCCCCA
261 ATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAAAATGAATAGTCATACTAATCCCCA
* * * *
219078 TTCTTTTTAGGATTAAGCACCATAATCTTTTCATATGGATACAAGATATTGATGCTTTGGTTTTG
326 TTCTTTTTACGATTAAGCACCATAATCTTTTCATAAGAATACAAGATATTGATGCTTTGGTATTG
* *
219143 CAAGAAAGGTTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
391 CAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACA
* * * *
219208 TGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTTTGCTCTTTAG
456 TGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTCTCCTCTTCAA
* *
219273 GATAAATGATATTGATGGTTTTCTTTTGTATGAAAATCATTTCTTTGCCCTATTTTTCTTAAAAT
521 GATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTCTTTGCCCTATTTTCCTTAAAAT
*
219338 CAAAATTCATCCCTTATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATT
586 CAAAATTCATCCCATATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATT
219403 GGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACACTGATAAA
651 GGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACACTGATAAA
* * * * * *
219451 GATCTTCATTCATTTTGTGGTTAGGTACTATAAACACGTTATCCTCTTTAGGATAAATGATATTA
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTCAAGATAAATGATATTA
* * * *
219516 ATGGTTTTCTTTTGTAAGGAAATC-TTTTCTTTGCCCTTTTTTCCTTAAAATCAAAATTCATCGC
66 ATGGTTTTCTTTTGCAAGAAAATCATTTT-TTTGCCCTATTTTCCTTAAAATCAAAATTCATCCC
* * *
219580 GTAAAAACAACAAGCATCGATTCTCGCAACAGTCTCCT-TTCTTTTCAGGATTGGGAAGCAA-AA
130 ATAAAAACAACAAGCATCGATTCTCGCAACAGTCT-CTATTCTTTTCAAGATTGGGAACCAAGAA
* *
219643 GCATA-TTACCTTCATTAGGATACATGACATTGATTCTTTG-GTGTCGCAAGAAAAGGTTTTCTT
194 -CATATTTACCTT-ATTAGGATACATGACATTGATGCTTTGAG-GTAGCAAG-AAAGGTTTT-TT
* * * *
219706 T-CCACCATTTCTGATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACAA-GAATAGT-ATACT
254 TCCCACCATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAA-AATGAATAGTCATACT
* *
219768 AATCCCCATTCTTTTTACGATTAGGCACCATAAACATTGTCTTTCATAAGAATACAAGATATTGA
318 AATCCCCATTCTTTTTACGATTAAGCACCAT--A-A-TCT-TTTCATAAGAATACAAGATATTGA
*
219833 TGCTTTGGTATTGCAAGAAAGGCTTTCTT-CCCCTCAATTTTTGTAGAGTCTATGTTCATGCCTC
378 TGCTTTGGTATTGCAAGAAAGGCTTTCTTCCCCCT-AATTTTTGTAGAGTCTAAGTTCATGCCTC
* *
219897 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGAGATTAGGCACTATAAACAT
442 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACAC
*
219962 ATTCTCCTCTTCAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTTTTTGCCCT
507 ATTCTCCTCTTCAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTCTTTGCCCT
220027 ATTTTCCTTAAAATCAAAATTCATCCCATATCTA
572 ATTTTCCTTAAAATCAAAATTCATCCCATATCTA
220061 TGATAAGCAT
Statistics
Matches: 535, Mismatches: 61, Indels: 23
0.86 0.10 0.04
Matches are distributed among these distances:
697 12 0.02
698 223 0.42
699 56 0.10
700 6 0.01
701 1 0.00
702 7 0.01
703 230 0.43
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (698 bp):
GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTCAAGATAAATGATATTA
ATGGTTTTCTTTTGCAAGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
TAAAAACAACAAGCATCGATTCTCGCAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAGAACA
TATTTACCTTATTAGGATACATGACATTGATGCTTTGAGGTAGCAAGAAAGGTTTTTTTCCCACC
ATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAAAATGAATAGTCATACTAATCCCCA
TTCTTTTTACGATTAAGCACCATAATCTTTTCATAAGAATACAAGATATTGATGCTTTGGTATTG
CAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACA
TGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTCTCCTCTTCAA
GATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTCTTTGCCCTATTTTCCTTAAAAT
CAAAATTCATCCCATATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATT
GGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACACTGATAAA
Found at i:220451 original size:469 final size:473
Alignment explanation
Indices: 219451--220611 Score: 1490
Period size: 469 Copynumber: 2.5 Consensus size: 473
219441 CACTGATAAA
* * * * *
219451 GATCTTCATTCATTTTGTGGTTAGGTACTATAAACACGTTATCCTCTTTAGGATAAATGATATTA
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
* * * *
219516 ATGGTTTTCTTTTGTAAGGAAATC-TTTTCTTTGCCCTTTTTTCCTTAAAATCAAAATTCATCGC
66 ATGGTTTTCTTTTGTATGAAAATCATTTT-TTTGCCCTATTTTCCTTAAAATCAAAATTCATCCC
* *** * *
219580 GTAAAAACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAGGATTGGGAAGCAAAAGC
130 ATATCTACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAGC
* *
219645 ATATTACCTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCA
195 ATATTACCTTCATTAGGATACATGACATTGATGCTTTGGTGTAGCAAGAAAAGGTTTTCTTTCCA
* * * *
219710 CCATTTCTGATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACAAGAATAGTATACTAATCCCC
260 CCATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAACAAGAATAGTATACTAATCCCC
* *
219775 ATTCTTTTTACGATTAGGCACCATAAACATTGTCTTTCATAAGAATACAAGATATTGATGCTTTG
325 ATTCTTTTTACGATTAAGCACCAT-AACATTCTCTTTCATAAGAATACAAGATATTGATGCTTTG
*
219840 GTATTGCAAGAAAGGCTTTCTTCCCCTCAATTTTTGTAGAGTCTATGTTCATGCCTCAAATGAGA
389 GTATTGCAAGAAAGGCTTTCTTCCCCTCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGA
219905 CAAACATGGATTCTAGTAAT
454 CAAACATGGATTCTAGTAAT
* * * *
219925 GATCTTCATTCATTTTGAGATTAGGCACTATAAACATATTCTCCTCTTCAAGATAAATGATATTG
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
*
219990 ATGGTTTTCTTTTGCATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
66 ATGGTTTTCTTTTGTATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
** * * * * * *
220055 TATCTATGATAAGCATTGATTCTCGTAATAGTCT-CTATTTTTTTCAAGATTGGGATCCAAGAA-
131 TATCTACAACAAGCATCGATTCTCGCAACAGTCTCCT-TTCTTTTCAAGATTGGGAACCAA-AAG
* * * * **
220118 CATATTTTCGTT-ATTCGGATACATGTCATTGATGCTTTGAG-GTAGCAAG-AATTGTTTT-TTT
194 CATA-TTACCTTCATTAGGATACATGACATTGATGCTTTG-GTGTAGCAAGAAAAGGTTTTCTTT
* *
220179 CCCACCGTTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAA-AATGAATTGTCATACTA
257 -CCACCATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAACAA-GAATAGT-ATACTA
* * *
220243 ATCCCCATTCTTTTTAGGATTAAGCACCAT-A-A-TCT-TTTCATATGGATACAAGATATTGATG
319 ATCCCCATTCTTTTTACGATTAAGCACCATAACATTCTCTTTCATAAGAATACAAGATATTGATG
* * *
220304 CTTTGGTTTTGCAAGAAAGGTTTTCTTCCCC-CTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAA
384 CTTTGGTATTGCAAGAAAGGCTTTCTTCCCCTC-AATTTTTGTAGAGTCTAAGTTCATGCCTCAA
220368 ATGAGACAAACATGGATTCTAGTAAT
448 ATGAGACAAACATGGATTCTAGTAAT
* * *
220394 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTTTGCTCTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
*
220459 ATGGTTTTCTTTTGTATGAAAATCATTTCTTTGCCCTA-TTT-CTCTAAAATTCAAAATTCATCC
66 ATGGTTTTCTTTTGTATGAAAATCATTTTTTTGCCCTATTTTCCT-TAAAA-TCAAAATTCATCC
* * * * * ** * * *
220522 CTTATCTA-AGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATTGAGAAGCAAAA
129 CATATCTACA-ACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAA
* *
220586 GCACATTCCCTTCATTAGGATACATG
193 GCATATTACCTTCATTAGGATACATG
220612 GCACTGATAA
Statistics
Matches: 594, Mismatches: 78, Indels: 35
0.84 0.11 0.05
Matches are distributed among these distances:
467 2 0.00
468 16 0.03
469 275 0.46
470 3 0.01
471 1 0.00
472 6 0.01
473 56 0.09
474 223 0.38
475 12 0.02
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (473 bp):
GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
ATGGTTTTCTTTTGTATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
TATCTACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAGCA
TATTACCTTCATTAGGATACATGACATTGATGCTTTGGTGTAGCAAGAAAAGGTTTTCTTTCCAC
CATTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAACAAGAATAGTATACTAATCCCCA
TTCTTTTTACGATTAAGCACCATAACATTCTCTTTCATAAGAATACAAGATATTGATGCTTTGGT
ATTGCAAGAAAGGCTTTCTTCCCCTCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACA
AACATGGATTCTAGTAAT
Found at i:220829 original size:229 final size:229
Alignment explanation
Indices: 220394--220840 Score: 594
Period size: 229 Copynumber: 2.0 Consensus size: 229
220384 TTCTAGTAAT
* *
220394 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTTTGCTCTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
* *
220459 ATGGTTTTCTTTTGTATGAAAATCATTTCTTTGCCCTATTTCTCTAAAATTCAAAATTCATCCCT
66 ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTCTCTAAAATTCAAAATTCATCCCG
** * *
220524 TATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATTGAGAAGCAAAAGCA
131 TATAAAAAACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGAGAAGCAAAAGCA
220589 CATTCCCTTCATTAGGATACATGGCACTGATAAA
196 CATTCCCTTCATTAGGATACATGGCACTGATAAA
** * * *
220623 GATCTTCATTCATTTTGTGGTTAGGCACTATAAACACGTTATCCTTTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
* * * *
220688 ATGGTTTTCTTTTGTAAGGAAATCTTTTCTTTGCCCT-TTTTTCCTTAAAA-TCAAAATTCATCG
66 ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTCT-C-TAAAATTCAAAATTCATCC
* * * ** * * * *
220751 CGTA-AAAACAACAAGCATCGATTCTCGCAACAGTCTCCTTTCTTTTCAGGATTGGGAAGCTAAA
129 CGTATAAAA-AACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGAGAAGCAAAA
* *
220815 GCATATTGCCTTCATTAGGATACATG
193 GCACATTCCCTTCATTAGGATACATG
220841 AGATTGATTC
Statistics
Matches: 187, Mismatches: 28, Indels: 6
0.85 0.13 0.03
Matches are distributed among these distances:
228 6 0.03
229 176 0.94
230 5 0.03
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.37
Consensus pattern (229 bp):
GATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTATCCTCTTTAGGATAAATGATATTG
ATGGTTTTCTTTTGTAAGAAAATCATTTCTTTGCCCTATTTCTCTAAAATTCAAAATTCATCCCG
TATAAAAAACAAACAGCGATTCTCGCAACAATCTCCAATCTTTCCAAGATTGAGAAGCAAAAGCA
CATTCCCTTCATTAGGATACATGGCACTGATAAA
Found at i:221278 original size:704 final size:698
Alignment explanation
Indices: 219925--221315 Score: 1877
Period size: 704 Copynumber: 2.0 Consensus size: 698
219915 TTCTAGTAAT
* *
219925 GATCTTCATTCATTTTGAGATTAGGCACTATAAACATATTCTCCTCTTCAAGATAAATGATATTG
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTCAAGATAAATGATATTG
*
219990 ATGGTTTTCTTTTGCATGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
66 ATGGTTTTCTTTTGCAAGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
*** ** * * * * * *
220055 TATCTATGATAAGCATTGATTCTCGTAATAGTCTCTATTTTTTTCAAGATTGGGATCCAAGAACA
131 TAAAAACAACAAGCATCGATTCTCGCAACAGTCTCTATTCTTTTCAAGATTGGGAGCCAAGAACA
* * * * **
220120 TATTTTCGTTATTCGGATACATGTCATTGATGCTTTGAGGTAGCAAGAATTGTTTTTTTCCCACC
196 TATTTGCCTTATTAGGATACATGACATTGATGCTTTGAGGTAGCAAGAAAGGTTTTTTTCCCACC
*
220185 GTTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAAAATGAATTGTCATACTAATCCCCA
261 GTTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAAAATGAATAGTCATACTAATCCCCA
* * * *
220250 TTCTTTTTAGGATTAAGCACCATAATCTTTTCATATGGATACAAGATATTGATGCTTTGGTTTTG
326 TTCTTTTTACGATTAAGCACCATAATCTTTTCATAAGAATACAAGATATTGATGCTTTGGTTTCG
* * * *
220315 CAAGAAAGGTTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
391 CAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTCCATGCCACAAATGAGACAAACA
* * * *
220380 TGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTTTGCTCTTTAG
456 TGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTCTCCTCTTCAA
* **
220445 GATAAATGATATTGATGGTTTTCTTTTGTATGAAAATCATTTCTTTGCCCTATTTCTCTAAAATT
521 GATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTCTTTGCCCTATTTCTCTAAAAGA
*
220510 CAAAATTCATCCCTTATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATT
586 CAAAATTCATCCCATATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATT
220575 -GAGAAGCAAAAGCACATTCCCTTCATTAGGATACATGGCACTGATAAA
651 AG-GAAGCAAAAGCACATTCCCTTCATTAGGATACATGGCACTGATAAA
* * * * * *
220623 GATCTTCATTCATTTTGTGGTTAGGCACTATAAACACGTTATCCTTTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTCAAGATAAATGATATTG
* * * *
220688 ATGGTTTTCTTTTGTAAGGAAATC-TTTTCTTTGCCCTTTTTTCCTTAAAATCAAAATTCATCGC
66 ATGGTTTTCTTTTGCAAGAAAATCATTTT-TTTGCCCTATTTTCCTTAAAATCAAAATTCATCCC
* * *
220752 GTAAAAACAACAAGCATCGATTCTCGCAACAGTCTCCT-TTCTTTTCAGGATTGGGAAGCTAA-A
130 ATAAAAACAACAAGCATCGATTCTCGCAACAGTCT-CTATTCTTTTCAAGATTGGG-AGCCAAGA
* * * *
220815 GCATA-TTGCCTTCATTAGGATACATGAGATTGATTCTTTG-GTGTCGCAAGAAAAGGTTTTCTT
193 ACATATTTGCCTT-ATTAGGATACATGACATTGATGCTTTGAG-GTAGCAAG-AAAGGTTTT-TT
* * * *
220878 T-CCACCGTTTCT-AATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATGAATAGTCATACT
254 TCCCACCGTTTCTGAA-AAAATCAAAGTTTGTCACTGAAGTAAGACAAAAATGAATAGTCATACT
* * *
220941 AATCCCCATTCTTTTTACGATTAGGTACCATAAACATAGTCTTTCATAAGAATACAAGATATTGA
318 AATCCCCATTCTTTTTACGATTAAGCACCAT--A-AT-CT-TTTCATAAGAATACAAGATATTGA
*
221006 TGCTTTGGTTTCGCAAGAAAGGCTTTCTT-CCCCTCAATTTTTGTAGAGTCTATGTCCATGCCAC
378 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCT-AATTTTTGTAGAGTCTAAGTCCATGCCAC
* *
221070 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGAGATTAGGCACTATAAACAT
442 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACAC
*
221135 ATTCTCCTCTTCAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTTTTTGCCCT
507 ATTCTCCTCTTCAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTCTTTGCCCT
* ** * * *
221200 ATTT-TCCTTAAAGACAAAATTCATCCCATATCTAAGGTAAGCATCGATTCTTGTAA-AAGTCTC
572 ATTTCT-CTAAAAGACAAAATTCATCCCATATCTAAGACAAACAGCGATTCTCGTAACAA-TCTC
*** *
221263 TTTTCTTTTCAAGATTAGGAAGCAAAAGCACATTCCCTTCATTAGGATACATG
635 CAATCTTTCCAAGATTAGGAAGCAAAAGCACATTCCCTTCATTAGGATACATG
221316 ACATTGATGC
Statistics
Matches: 601, Mismatches: 75, Indels: 28
0.85 0.11 0.04
Matches are distributed among these distances:
697 10 0.02
698 188 0.31
699 95 0.16
700 3 0.00
701 1 0.00
702 2 0.00
703 9 0.01
704 292 0.49
705 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.37
Consensus pattern (698 bp):
GATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTATCCTCTTCAAGATAAATGATATTG
ATGGTTTTCTTTTGCAAGAAAATCATTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
TAAAAACAACAAGCATCGATTCTCGCAACAGTCTCTATTCTTTTCAAGATTGGGAGCCAAGAACA
TATTTGCCTTATTAGGATACATGACATTGATGCTTTGAGGTAGCAAGAAAGGTTTTTTTCCCACC
GTTTCTGAAAAAATCAAAGTTTGTCACTGAAGTAAGACAAAAATGAATAGTCATACTAATCCCCA
TTCTTTTTACGATTAAGCACCATAATCTTTTCATAAGAATACAAGATATTGATGCTTTGGTTTCG
CAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTCCATGCCACAAATGAGACAAACA
TGGATTCTAGTAATGATCTTCATTCATTTTCAGATTAGGCACTATAAACACATTCTCCTCTTCAA
GATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCATTTCTTTGCCCTATTTCTCTAAAAGA
CAAAATTCATCCCATATCTAAGACAAACAGCGATTCTCGTAACAATCTCCAATCTTTCCAAGATT
AGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGGCACTGATAAA
Found at i:221530 original size:475 final size:475
Alignment explanation
Indices: 220623--224217 Score: 3634
Period size: 475 Copynumber: 7.5 Consensus size: 475
220613 CACTGATAAA
* * * **
220623 GATCTTCATTCATTTTGTGGTTAGGCACTATAAACACGTTATCCTTTTTAGGATAAATGATATTG
1 GATCTTCATTCATTTTGTGATTAGGCACTATAAACA-TTTCTCCTCATTAGGATAAATGATATTG
* * * * *
220688 ATGGTTTTCTTTTGTAAGGAAATCTTTTCTTTGCCCTTTTTTCCTTAAAATCAAAATTCATCGCG
65 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
** * * * * *
220753 TA-AAAACAACAAGCATCGATTCTCGCAACAGTCTCCT-TTCTTTTCAGGATTGGGAAGCTAAAG
130 TATCTAA-GACAAGCATCGATTCTCGTAAAAGTCT-CTATTCTTTTCAAGATTGGGAAGCAAAAG
* * * * *
220816 CATATTGCCTTCATTAGGATACATGAGATTGATTCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCC
193 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCC
* * *
220881 ACCGTTTCTAATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATGAATAGTCATACTAATCC
258 ACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * * *
220946 CCATTCTTTTTACGATTAGGTACCATAAACATAGTC-TTTCATAAGAATACAAGATATTGATGCT
323 CCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCT
* * * *
221010 TTGGTTTCGCAAGAAAGGCTTTCTTCCCCTCAATTTTTGTAGAGTCTATGTCCATGCCACAAATG
388 TTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCACAAATG
221075 AGACAAACATGGATTCTAGTAAT
453 AGACAAACATGGATTCTAGTAAT
* *
221098 GATCTTCATTCATTTTGAGATTAGGCACTATAAACATATTCTCCTC-TTCAAGATAAATGATATT
1 GATCTTCATTCATTTTGTGATTAGGCACTATAAACAT-TTCTCCTCATT-AGGATAAATGATATT
*
221162 GATGGTTTTCTTTTGCATGAAAATCATTTT-TTTGCCCTATTTTCCTTAAAGA-CAAAATTCATC
64 GATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGCCCTATTTTCCTTAAA-ATCAAAATTCATC
** * * *
221225 CCATATCTAAGGTAAGCATCGATTCTTGTAAAAGTCTCTTTTCTTTTCAAGATTAGGAAGCAAAA
127 CCATATCTAAGACAAGCATCGATTCTCGTAAAAGTCTCTATTCTTTTCAAGATTGGGAAGCAAAA
**
221290 GCACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCCTTC
192 GCACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTC
* * *
221355 CACCGTTTTTGATAGAATCAAAGTCTGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATC
257 CACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* * * *
221420 CCCGTTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCGTAACGATACATGATATTGATGC
322 CCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGC
* * * * *
221485 TTTGGTTTCGTAGGAAAAGCTTTCTGCCCCCCAATTTTT-TAGAGTCTAAGTTCGTGCCTCAAAT
387 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCACAAAT
* * *
221549 AAGACAAACATGGATCCTAGTAGT
452 GAGACAAACATGGATTCTAGTAAT
** * * ** *
221573 GATCTTTGTTCATTTCGTTATTAGATACTATAAACAGTTTCTCCTCATTAGGATAAATGATAATG
1 GATCTTCATTCATTTTGTGATTAGGCACTATAAACA-TTTCTCCTCATTAGGATAAATGATATTG
* * *
221638 ATGATTTTCTTTTGCATTGAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAAAATTCAT-CC-
65 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
* *
221701 TTTCAATAAGACAAGCATCGATTCTCGTAACAA-TCTCTATTCTTTTCAAGATTGGGAACCAAGA
130 TATC--TAAGACAAGCATCGATTCTCGTAA-AAGTCTCTATTCTTTTCAAGATTGGGAAGCAA-A
* * * * * *
221765 A-CACATTCTCGTT-GTTAGGATACATGATATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTATT
191 AGCACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATT
* * ** * **
221828 TCCTCCGTTTTTGATAGGGTCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATAGTCGCACTAA
255 TCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * * **
221893 TCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTT-ACCAAGGATACAAGATAAGGA
320 TCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCA-TAAGGATACATGATATTGA
* * *
221957 CGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCGAAGTTCGTG-C-C-
384 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCACA
*
222019 AATGAGACAAACATAGATTCTAGTAAT
449 AATGAGACAAACATGGATTCTAGTAAT
** * * *
222046 GATCTTTGTTCGTTTTGTGATTTGACACTATAAAC-TCCTTCTCCTCATTAGGATAAATGATATT
1 GATCTTCATTCATTTTGTGATTAGGCACTATAAACAT--TTCTCCTCATTAGGATAAATGATATT
* * **
222110 GATGGTTTTTTATTTTGCATGAAAATCTTTTCTTTGCTTTATTTTCCTTTGCATGAAAATCTTTT
64 GATGG--TTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC--T---T--AAA------
* * *
222175 CTTTGCTTTATTTTCCTTGACATCAAAATTCATCCCTTATCTAAGGCAAGTATCGATTCTCGTAA
114 ---------A---T-C---A-A----AATTCATCCCATATCTAAGACAAGCATCGATTCTCGTAA
* * * * * *
222240 TAGTCTCTATTCATTTCAAGATTGGGAA-CGAAGAA-CTCATTCCCGTCATTCA-GATACACGAT
158 AAGTCTCTATTCTTTTCAAGATTGGGAAGC-AA-AAGCACATTCCCTTCATT-AGGATACATGAC
* * * ** *
222302 ATTCATGCATTAGTGTCGCAAGAATTGTTTTTATTTCCACCGTTTTTTATAGAATCAAAGTTTGT
220 ATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTTTTTATAGAATCAAAGTTTGT
* * * * *
222367 CTTTTAAATAGGACAAACATTAATAGTCGTACTAATCCCCATTCTTTTTTAGGATTTGGCACCAT
285 CTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTC-TTTTTAGGATTAGGCACCAT
* * * * *
222432 AAAGATAAGCCTTTTCATAAGGATAC-TCGATATTCATGCTTTGGTTTCACAAGAAAGGCTTTCC
349 AAACAT-AGTCTTTTCATAAGGATACAT-GATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCT
** * *
222496 TCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTTAAATGAGAGAAATATGGATTCTAGTAAT
412 TCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCACAAATGAGACAAACATGGATTCTAGTAAT
* * *
222560 GATCGTCATTCATTTT-TAGATTAGGCACTATAAACACTTTTTCCTCTTTAGGATAAATGATATT
1 GATCTTCATTCATTTTGT-GATTAGGCACTATAAACA-TTTCTCCTCATTAGGATAAATGATATT
* * * * * *
222624 AATGGTTTTCTTTTGCATGAAAATCATTTCTTTGCCTTATTTTCTTTAAAATCAAAATTCAACCC
64 GATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCC
* * * * *
222689 TTATCTAAGACAAACATTGATTCTCGTAACAA-TCTTTATTCTTTTCAAGATTAGGAAGCAAAAG
129 ATATCTAAGACAAGCATCGATTCTCGTAA-AAGTCTCTATTCTTTTCAAGATTGGGAAGCAAAAG
* * * * * * **
222753 CACATTCCATTCCTTGGGATACATAACAGTGATCCTTTGGTGTCGCAAGAAAAGGTTTTCCTTCC
193 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCC
* * * * * * *
222818 ACTGTTTTTTATAGAATCAAAGTTTGTCTATTAAAAAAGATAAACGTGAGTAGTCAAACTAATCC
258 ACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * * * * * *
222883 CCATTCTTTTTAGGATTAGGCTCCATAAACATTGTCTTCTAATAGGGATACACGATATTGATGAT
323 CCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCT
* * * * *
222948 TTGCTTTTGTAAGCAAGGCTTTCTTCCCCCCAA-TTTTGTAGAGTCTAAGTTCGTGCCTCAAAT-
388 TTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCACAAATG
223011 AGGACAAACATGGATTCTAGTAAT
453 A-GACAAACATGGATTCTAGTAAT
* ** * *
223035 AATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAATTGATATTG
1 GATCTTCATTCATTTTGTGATTAGGCACTATAAACA-TTTCTCCTCATTAGGATAAATGATATTG
* *
223100 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAATCAAAATTCAT-CCA
65 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCA
* * ** * * * *
223164 T-TCAACAAGACAAGCATTGATTCTCGTAACTGTTTCCAATCTTTTCAAGATTGGGAACCAAGAA
130 TATC--TAAGACAAGCATCGATTCTCGTAAAAGTCTCTATTCTTTTCAAGATTGGGAAGCAA-AA
* * * * ** *
223228 -CACATTCTCGTT-GTTAGGATACAT-AGCATTGATGTTTTGGTCTCGCAAGAATTGCTTTTATT
192 GCACATTC-CCTTCATTAGGATACATGA-CATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATT
* * *
223290 TCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATAGTCATACCAA
255 TCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * *
223355 T-CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTCAGAAGGATAC-TCGATATTAA
320 TCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAT-GATATTGA
* * *** * * * * *
223418 CGCTTTGTTTTCGCAAGAAAGGCTTTCTTCCCTTTAATTTTTGTAGAGTCTGAGATCATATCTA-
384 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGT-GCCAC
* *
223482 GAATGAGACAGACATGGATTCTAGTAAT
448 AAATGAGACAAACATGGATTCTAGTAAT
* * *
223510 GATCTTCATTCATTTTGTGAGTAGGCACTATAAACACATTCTCTTCATTAGGATAAATGATATTG
1 GATCTTCATTCATTTTGTGATTAGGCACTATAAACA-TTTCTCCTCATTAGGATAAATGATATTG
** * * *
223575 ATAATTTTTTTTTGCGTGGAAGTC-TTTCTTCTGCCCTATTTTCCTTAAAATCAAAATTCATCCC
65 ATGGTTTTCTTTTGCATGGAAATCTTTTCTT-TGCCCTATTTTCCTTAAAATCAAAATTCATCCC
* ** * * * * *
223639 TTAAATAAGACAGGCATCGATTCTCATAACAA-TCTCTATTCTTTTCAAGATT-GG-ATCCAAGG
129 ATATCTAAGACAAGCATCGATTCTCGTAA-AAGTCTCTATTCTTTTCAAGATTGGGAAGCAAAAG
* * * * * * *
223701 ACACATTTTCGTT-ATTCGGATACATGTCATTGATGCTTTAGG-GTAGCAAGAATTA-TTTTTAT
193 -CACA-TTCCCTTCATTAGGATACATGACATTGATGCTTT-GGTGTCGCAAGAA-AAGGTTTTAT
** * * * * *
223763 TTCCACTATTTTTAATAGAATGAAAGTTTATCTCTTAAATAGGACAAACATTAATAGTCATACTA
254 TTCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* ** *
223828 ATCCCCATTCTTTTTAGGATTGGGCACCATAATGATAGTCTTTTCATAAGGATAC-TCGATATTA
319 ATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAT-GATATTG
* * * * *
223892 ACGCTCTGGTTTCGCAAGAAAGGCTTT-TTCCCCCTAATTTTTGTAGAGTCTAAGATC--GCAAC
383 ATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCAC
* *
223954 TTAAATAAGACAAACATAGATTCTAGTAAT
448 --AAATGAGACAAACATGGATTCTAGTAAT
* * * *
223984 GATCTTCATTCATTTAGTCG-TTAGGCACTATAAACACGTTCTCGTC-TCTAGAATAAATGATAT
1 GATCTTCATTCATTTTGT-GATTAGGCACTATAAACA-TTTCTCCTCAT-TAGGATAAATGATAT
* * *
224047 TGATGGTTTTTCTTTTACAAGGAAA-CGTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCAT
63 TGATGG-TTTTCTTTTGCATGGAAATC-TTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCAT
* * * * *
224111 CCCATCA-ATAAGACAAGCATCAATTCTCGTAACAGTCTCCT-CTCCTTTCAAGATTGGGAAGCA
126 CCCAT-ATCTAAGACAAGCATCGATTCTCGTAAAAGTCT-CTATTCTTTTCAAGATTGGGAAGCA
* ** * * *
224174 AAAGCATATAACCTTCATTAGGATACAAGATATTGACGCTTTGG
189 AAAGCACATTCCCTTCATTAGGATACATGACATTGATGCTTTGG
224218 CTTCACATGA
Statistics
Matches: 2604, Mismatches: 402, Indels: 228
0.81 0.12 0.07
Matches are distributed among these distances:
471 3 0.00
472 1 0.00
473 91 0.03
474 320 0.12
475 1393 0.53
476 186 0.07
477 30 0.01
478 165 0.06
479 2 0.00
480 1 0.00
482 4 0.00
483 1 0.00
486 1 0.00
487 1 0.00
490 1 0.00
497 1 0.00
500 1 0.00
501 1 0.00
504 1 0.00
505 4 0.00
507 1 0.00
508 4 0.00
509 167 0.06
510 27 0.01
511 78 0.03
512 38 0.01
513 1 0.00
514 79 0.03
516 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (475 bp):
GATCTTCATTCATTTTGTGATTAGGCACTATAAACATTTCTCCTCATTAGGATAAATGATATTGA
TGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCAT
ATCTAAGACAAGCATCGATTCTCGTAAAAGTCTCTATTCTTTTCAAGATTGGGAAGCAAAAGCAC
ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACC
GTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCA
TTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTG
GTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCACAAATGAGA
CAAACATGGATTCTAGTAAT
Found at i:222166 original size:34 final size:34
Alignment explanation
Indices: 222123--222192 Score: 140
Period size: 34 Copynumber: 2.1 Consensus size: 34
222113 GGTTTTTTAT
222123 TTTGCATGAAAATCTTTTCTTTGCTTTATTTTCC
1 TTTGCATGAAAATCTTTTCTTTGCTTTATTTTCC
222157 TTTGCATGAAAATCTTTTCTTTGCTTTATTTTCC
1 TTTGCATGAAAATCTTTTCTTTGCTTTATTTTCC
222191 TT
1 TT
222193 GACATCAAAA
Statistics
Matches: 36, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
34 36 1.00
ACGTcount: A:0.17, C:0.17, G:0.09, T:0.57
Consensus pattern (34 bp):
TTTGCATGAAAATCTTTTCTTTGCTTTATTTTCC
Found at i:222180 original size:19 final size:19
Alignment explanation
Indices: 222123--222180 Score: 61
Period size: 19 Copynumber: 3.3 Consensus size: 19
222113 GGTTTTTTAT
222123 TTTGCATGAAAATCTTTTC
1 TTTGCATGAAAATCTTTTC
** *
222142 TTTGC-T--TTAT-TTTCC
1 TTTGCATGAAAATCTTTTC
222157 TTTGCATGAAAATCTTTTC
1 TTTGCATGAAAATCTTTTC
222176 TTTGC
1 TTTGC
222181 TTTATTTTCC
Statistics
Matches: 29, Mismatches: 6, Indels: 8
0.67 0.14 0.19
Matches are distributed among these distances:
15 9 0.31
16 3 0.10
18 3 0.10
19 14 0.48
ACGTcount: A:0.19, C:0.17, G:0.10, T:0.53
Consensus pattern (19 bp):
TTTGCATGAAAATCTTTTC
Found at i:222203 original size:34 final size:34
Alignment explanation
Indices: 222123--222203 Score: 128
Period size: 34 Copynumber: 2.4 Consensus size: 34
222113 GGTTTTTTAT
*
222123 TTTGCATGAAAATCTTTTCTTTGCTTTATTTTCC
1 TTTGCATCAAAATCTTTTCTTTGCTTTATTTTCC
*
222157 TTTGCATGAAAATCTTTTCTTTGCTTTATTTTCC
1 TTTGCATCAAAATCTTTTCTTTGCTTTATTTTCC
222191 -TTGACATCAAAAT
1 TTTG-CATCAAAAT
222204 TCATCCCTTA
Statistics
Matches: 45, Mismatches: 1, Indels: 2
0.94 0.02 0.04
Matches are distributed among these distances:
33 3 0.07
34 42 0.93
ACGTcount: A:0.22, C:0.17, G:0.09, T:0.52
Consensus pattern (34 bp):
TTTGCATCAAAATCTTTTCTTTGCTTTATTTTCC
Found at i:225044 original size:475 final size:474
Alignment explanation
Indices: 224188--227965 Score: 3812
Period size: 475 Copynumber: 8.0 Consensus size: 474
224178 CATATAACCT
* * * * ** *
224188 TCATTAGGATACAAGATATTGACGCTTTGGCTTCACATGAAAGGCTTTCTTCCCCCCAATTTTTG
1 TCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT-CCCCCAATTTTTG
* * **
224253 TAGAGC-CTAAGTTCGTGCCTCAAATGAAACAAACATGGATTGTAGTAATGATCTTCATTCATTT
65 TAGA-CTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTT
* * * *
224317 TGAGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTGATGGTTTTCTTTTGC
129 TGTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
*
224382 ATGAAAATCATTTT-TTT-CCCTATTTTCCTTAAAATCAAAATTCATCCCTTAACTAAGGCAAGC
194 ATGAAAATC-TTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTT-ACTAAGACAAGC
* * * * * * ** * *
224445 ATCGATTCTCGTAACAGTCTCCATTCTTTTGAGGATTTGCAAGCAAAAGCACATTCAATTGATTG
257 ATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAGCACATTCCCTTTATTA
* * * * * * ** * *
224510 GGATGCATGACAATAATGCTTTAGTGTTGCAAGAAAAGGTTTTCCTTCCACCATTTTTGATTGAA
322 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATAGAA
* * * *
224575 TCATAGTTTGTCTCTTAAATAAGACAAACATGAGTAGTCGTTCTAATCCCCATTCTTTTC-GAGA
387 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG-GA
* *
224639 TTAGGCTTCACAAACATTGTCTTC
451 TTAGGCTCCATAAACATTGTCTTC
** ** *
224663 GAATAAGGATACACAATATTGATGCTTTCGTTTTGCAAGAAAGGCTTTCTTCCCCCAATTTTTGT
1 TCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCAATTTTTGT
* * * * *
224728 AGACTCTATGTTCATGCCTTAAATGAGACAAAAATGGATTCTAGCAATGATCTTTGTTCATTTTG
66 AGACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTG
* * *
224793 TGATTAGACACTATAAACACTTTCTCC-CTATTAGCATAAATGAT-TTTATTGATTTTCTTTTGC
131 TGATTAGACACTATAAACACATTCTCCTC-ATTAGGATAAATGATATTGA-TGATTTTCTTTTGC
* * * *
224856 ATGAAAATCTTTCCTTCGCACTATTTTCCTTAAAATCAAAATTCATCCCTTATCTAAGATAAGCA
194 ATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTA-CTAAGACAAGCA
* * * * *
224921 TCGATTCTCATACCAATCTCCATTGTTTTCAAGATTGGGAACCAAGAA-CACATTCCTTTTACTA
258 TCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAA-AAGCACATTCCCTTTATTA
* * * *
224985 GGATACATGACATTGATGCTTTGGTGTCACATGAAATGCTTTTATTTCCATCGTTTTTGAT-GAA
322 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATAG-A
* * * * * * *
225049 ATCAAAATTTGTCTCTTAAATAAGATAAACAAGAATAGTCGTACTAATCCTCACTCTTTTCAAGA
386 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
* *
225114 TTAGGC-ACATAAACATAT-TCTTT
451 TTAGGCTCCATAAACAT-TGTCTTC
* * *
225137 TCATAAGGATACTTGATATTGACGCTTTGGTTTTGCAAGAAAGGCTTTGTTCCCCCTAATTTTTG
1 TCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCC-AATTTTTG
* * * * * * * **
225202 TAGAGTCTACGTCCATACCTCAAACGAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTT
65 TAGACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTT
* * *
225267 GT-AGTTAGGCACTATAAAAACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTGGC
130 GTGA-TTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * *
225331 AAGGAAATATC-TCT-TTTGCCCTATTTTCCTTAAAATCAAAATTCAT-CTTGTAAATAAGATAA
194 -ATGAAA-ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCT-T-ACTAAGACAA
* * * *
225393 GCATCGATTCTCATAACAGTCTCCTTTCTTTTTAAGATTGGGAAGCAAAAGCACATTCCCTTCAT
255 GCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAGCACATTCCCTTTAT
* * * * * * *** *
225458 CAGAATACCTGAC-TTGGATACTTTGGTGTCGCGAGAAAAGATTTTCCATCCATCGTTTTTGATA
320 TAGGATACATGACATT-GATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATA
* * * * *
225522 GAATCAATGTTTATCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCGTTATTTTCAG
384 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* * * *
225587 GATTAGGCACCATAACCATTATCTTA
449 GATTAGGCTCCATAAACATTGTCTTC
* * * * * * * * *
225613 TCATAAAGATACATGATATTGATGCTTCGATTTCGTAAAAAAAAGTTTTCTTTTCCCCAATTTTT
1 TCATAAGGATACATGATATTGATGCTTTGGTTTTG-CAAGAAAGGCTTTC-TTCCCCCAATTTTT
* * *
225678 GTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACTTGGATTCTAGTAGTGATCTTTGTTCATTT
64 GTAGACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTT
* * * * * * * * *
225743 TGTGATTAGAAATTGTAAGCACTTTCTCCTTATTGGGATAAAGGATAATGATGATTTTCTTTTGC
129 TGTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * ** * * *
225808 ATGGAAATCTTTTCTTTACCCTATTTTCCACAAAATCAAAATTGCCT-CCTTCAATAAGGCAAGC
194 ATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATT-CATCCCTT-ACTAAGACAAGC
* * * * * * * *
225872 GTCGGTTCTCGTAATAGCCTCCATTCTTTTCAAGATTGGAAACCAAGAA-CACATTCTCGTTATT
257 ATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAA-AAGCACATTCCCTTTATT
* * * * * *
225936 AGGAAACATGACATTGACGCTTTGGTGTCGTAAGAAAAGCTTTTATTTCCTCCGTTTTTTATATA
321 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATAGA
* * * * * *
226001 ATCAAAATTTGTCTCTTAAATAAAACAAACCTGAATAGTCACACTAATCCCTATT-TTGTTCAAG
386 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTT-TTCAGG
* * * *
226065 ATTAGGCACCATAAACGTAGTCTTT
450 ATTAGGCTCCATAAACATTGTCTTC
* * * **
226090 TCATAAGGATACAAGATAATGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCTCAATTTTTG
1 TCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCC-CAATTTTTG
* * *
226155 TAGAGC-CAAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCATTGTTCATTT
65 TAGA-CTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTT
* * * *
226219 TGTGATTAGAAAATATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGC
129 TGTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
226284 ATGAAAATCTTCTCTTTGCTCTATTTTCCTTAAAATCAAAATTCATCCCTTAACCAAGACAAGCA
194 ATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTT-ACTAAGACAAGCA
* * * * * * * ** *
226349 TCGA-TCCCTGTAATAGTCTCCATTCTTTTCAGGATTAGGAAGCAAAAGCATATTCCCTCCATTT
258 TCGATTCTC-ATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAGCACATTCCCTTTATTA
* * * *
226413 GGATACATGTCATTGATGCTTTGGTGTCGCAAG----G-TTTTCTTTCGACC-TTTTCTTATAGA
322 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCGTTTT-TGATAGA
* * ** *
226472 ATCAAAGTTTGTCTCTTAAATAAGATACACATGAGCAGTTATACTAATCCCCATTCTTTTCAGGA
386 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
* * * *
226537 TTACG-TACCCTAAACAGTGTTTTC
451 TTAGGCT-CCATAAACATTGTCTTC
* * * * * *
226561 TCGTTAGGATACATGATATTGATGGTTTGGTTTTGTACGAAAGGCCTTCTTCCCCCCAATTTTTG
1 TCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT-CCCCCAATTTTTG
* * * * ** * * * **
226626 TCGAGTCCATGTTTATGCCTCAAATGAGACAAACACGAACTCTAGTAATGATCTCAGCTT-ATTT
65 TAGACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTG-TTCATTT
* *
226690 TGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGAAGACTTTT-TTTTG
129 TGTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTG
* * * * * *
226754 CATGGAAATTTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTAATCCCATCAATAAAACAAGC
193 CATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCC-TTACTAAGACAAGC
* ** * * * *
226819 ATCGATTCTCGTAACAGTCTATATTCTTTTGAAGATTGGGAACCAAGAGCACATTCCCATT-CTA
257 ATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAGCACATTCCCTTTATTA
* ** * * * *
226883 CGGATACATGACATTGACGCTTTGGTG-CAGCAAGAATTGTTTTTATTTCTACCATTTTTTATAG
322 -GGATACATGACATTGATGCTTTGGTGTC-GCAAGAAAAGCTTTTATTTCCACCGTTTTTGATAG
* * * *
226947 AATCAAAGTTTGTCTCTTAAATAGGACAACCACT-AATAGTCATAGTAATCCCCATTCTTTTTAG
385 AATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCATACTAATCCCCATTCTTTTCAG
* * * * *
227011 GATTAGGCGCTATAAAGATAGTCTTT
449 GATTAGGCTCCATAAACATTGTCTTC
* * * *
227037 TCATTAGGATAC-TCGATATTGACGCTTTGCTTTCGCAAGAAAGGCTTTCTTCCCTCCAATTTTT
1 TCATAAGGATACAT-GATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCC-CCAATTTTT
* **
227101 GTAG-CGTCTAAGTTCGTGCCTTAAATGAGACAAA-ATGGATTCTAGTAATGATCTTCATTCATT
64 GTAGAC-TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATT
* * * * * * *
227164 CTGAGATTAGGCACTATAAACACATTCTCCTC-TAAAGGATAAATGAAATTGGTGGTTTTCTTTT
128 TTGTGATTAGACACTATAAACACATTCTCCTCAT-TAGGATAAATGATATTGATGATTTTCTTTT
** *
227228 GCATGAAAATAATTTCTTTGCCCTATTTTCCTTAAAAGCAAAATTCATCCC---CTAAGACAAGC
192 GCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTACTAAGACAAGC
* * * *
227290 ATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATTG
257 ATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAGCACATTCCCTTTATTA
* * **** * * *
227355 GGATACATGACATTGATGCGTTGGTGTCCCAAGAAAA-CGTTTTCCGACCACCATTTTTTATAAA
322 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC-TTTTATTTCCACCGTTTTTGATAGA
* * * *
227419 ATCAAAGTTTATCTCTTAAATAAGACAAACATGAGTAGTCGA-ACT-ATCCCCATTTTTTTTTAG
386 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC-ATACTAATCCCCA-TTCTTTTCAG
* *
227482 GATTATGCTCCATAAACATTGTTTTC
449 GATTAGGCTCCATAAACATTGTCTTC
* * * * * * ** *
227508 TAATAGGGATACATGATATTGATGCCTTAGATTTGTAAGAAACACTTTCTTCCCTCAAATTTTTG
1 TCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCC-CCAATTTTTG
* * * * *
227573 TAAAGTCTAAGTCCGTGCCTTAAATGAGACAAACATGGATTTTAGTAATGATCTTTGTTCATTTT
65 TAGACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTT
* * *
227638 GTGATTAGACACTATAAACACTTTCTCCTCATTATGAGAAATGATATTGATGATTTTCTTTTGCA
130 GTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * * * * * *
227703 TGAAAATCTTTTCTTTGCCTTATTTTCCATAGACTCAAAATTTATCCCTTCAATAAGATAAGCAT
195 TGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTT-ACTAAGACAAGCAT
** * * * *
227768 CGATTCTCATAACAGTCTTTATTCTCTTCATGATTGGGAACCAAGAA-CATATT-CTTGTTATTA
259 CGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAA-AAGCACATTCCCT-TTATTA
* * * *
227831 GGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTATTTTCACTGTTTTTGATATAA
322 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATAGAA
* * **
227896 TCAAAGTTTGTCTCTTAAATGAA-ATAAACATGAATTGTCGCACTAATCCCCATTCTTTTCAGGA
387 TCAAAGTTTGTCTCTTAAAT-AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
227960 TTAGGC
451 TTAGGC
227966 ACTGTAAACA
Statistics
Matches: 2698, Mismatches: 523, Indels: 163
0.80 0.15 0.05
Matches are distributed among these distances:
470 14 0.01
471 611 0.23
472 142 0.05
473 9 0.00
474 205 0.08
475 689 0.26
476 639 0.24
477 374 0.14
478 15 0.01
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (474 bp):
TCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCAATTTTTGT
AGACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTG
TGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
GAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTACTAAGACAAGCATCG
ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAGCACATTCCCTTTATTAGGAT
ACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATAGAATCAA
AGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGG
CTCCATAAACATTGTCTTC
Found at i:225117 original size:792 final size:789
Alignment explanation
Indices: 223503--225158 Score: 1677
Period size: 792 Copynumber: 2.1 Consensus size: 789
223493 ACATGGATTC
* * * ** * *
223503 TAGTAATGATCTTCATTCATTTTGTGAGTAGGCACTATAAACACATTCTCTTCATTAGGATAAAT
1 TAGTAATAATCCTCACTCATTTTAAGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
* * * *
223568 GATATTGATAATTTTTTTTTGCGTGGAAGTCTTTCTTCTGCCCTATTTTCCTTAAAATCAAAATT
66 GATATTGATAATTTTCTTTTGCATGAAAATCTTTCTTCTGCCCTATTTTCCTTAAAATCAAAATT
* * * * *
223633 CATCCCTTAAATAAGACAGGCATCGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGATCCA
131 CATCCCTTAAATAAGACAAGCATCGATTCTCATAACAATCTCCATTCTTTTCAAGATTGAAGCAA
* * * * * * * *
223698 AGGACACATTTTCGTTATTCGGATACATGTCATTGATGCTTTAGGGTAGCAAGAATTATTTTTAT
196 AAGACACA-TTTCATTATTCGGATACATGACAATAATGCTTTAGGGTAGCAAGAATAAGTTTTAC
* * * *
223763 TTCCACTATTTTTAATAGAATGAAAGTTTATCTCTTAAATAGGACAAACATTAATAGTCATACTA
260 TTCCACCATTTTTAATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCATACTA
* * * ** *** * *
223828 ATCCCCATTCTTTTTAGGATTGGGCACCATAATGATAGTCTTTTCATAAGGATACTCGATATTAA
325 ATCCCCATTCTTTTGAGGATTAGGCACCACAAACATAGTCTTCGAATAAGGATACACAATATTAA
* *
223893 CGCTCTGGTTTCGCAAGAAAGGCTTTTTCCCCCTAATTTTTGTAGAGTCTAAGATCGCAACTTAA
390 CGCTCTCGTTTCGCAAGAAAGGCTTTTTCCCCCTAATTTTTGTAGACTCTAAGATCGC-ACTTAA
* * *
223958 ATAAGACAAACATAGATTCTAGTAATGATCTTCATTCATTTAGTCGTTAGGCACTATAAACACGT
454 ATAAGACAAAAATAGATTCTAGCAATGATCTTCATTCATTTAGTCGTTAGACACTATAAACACGT
* * * * *
224023 TCTCGTCTCTAGAATAAATGATATTGATGGTTTTTCTTTTACAAGGAAACGTTTTCTTTGCCTTA
519 TCTCGCCTCTAGAATAAATGATATTGATGGATTTTCTTTTACAAGAAAACGTTTCCTTCGCCTTA
* *
224088 TTTTCCTTAAAATCAAAATTCATCCCATCAATAAGACAAGCATCAATTCTCGTAACAGTCTCCTC
584 TTTTCCTTAAAATCAAAATTCATCCCATC-ATAAGACAAGCATCAATTCTCATAACAATCTCCTC
* * * *
224153 TCCTTTCAAGATTGGGAAGCAAAAGCATATAACCTTCATTAGGATACAAGATATTGACGCTTTGG
648 TCCTTTCAAGATTGGGAACCAAAAGCACATAACCTTCACTAGGATACAAGACATTGACGCTTTGG
* * * * *
224218 CTTCACATGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGCCTAAGTTCGTGCCTCAAATGAAAC
713 CTTCACATGAAAGGCTTTATTCCCACCAATTTTTGTAGAACCAAAATTCGTGCCTCAAATGAAAC
* * *
224283 AAACATGGATTG
778 AAACAAGAATAG
* * * * *
224295 TAGTAATGATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAAT
1 TAGTAATAATCCTCACTCATTTTAAGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
** *
224360 GATATTGATGGTTTTCTTTTGCATGAAAATCATTT-TT-TTCCCTATTTTCCTTAAAATCAAAAT
66 GATATTGATAATTTTCTTTTGCATGAAAATC-TTTCTTCTGCCCTATTTTCCTTAAAATCAAAAT
* * * * * *
224423 TCATCCCTTAACTAAGGCAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTGAGGATTTGCAAG
130 TCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAATCTCCATTCTTTTCAAGA-TTG-AAG
* * * *
224488 CAAAAG-CACA-TTCAATTGATTGGGATGCATGACAATAATGCTTTAGTGTTGCAAGAA-AAGGT
193 CAAAAGACACATTTC-ATT-ATTCGGATACATGACAATAATGCTTTAGGGTAGCAAGAATAA-GT
* * * * * * *
224550 TTTCCTTCCACCATTTTTGATTGAATCATAGTTTGTCTCTTAAATAAGACAAACATGAGTAGTCG
255 TTTACTTCCACCATTTTTAATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCA
* ** *
224615 TTCTAATCCCCATTCTTTTCGA-GATTAGGCTTCACAAACATTGTCTTCGAATAAGGATACACAA
320 TACTAATCCCCATTCTTTT-GAGGATTAGGCACCACAAACATAGTCTTCGAATAAGGATACACAA
* * * * * *
224679 TATTGATGCTTTCGTTTTGCAAGAAAGGCTTTCTTCCCCC-AATTTTTGTAGACTCTATGTTCAT
384 TATTAACGCTCTCGTTTCGCAAGAAAGGCTTT-TTCCCCCTAATTTTTGTAGACTCTAAGATC--
* * ** *
224743 GC-CTTAAATGAGACAAAAATGGATTCTAGCAATGATCTTTGTTCATTTTGT-GATTAGACACTA
446 GCACTTAAATAAGACAAAAATAGATTCTAGCAATGATCTTCATTCATTTAGTCG-TTAGACACTA
* * * * * * *
224806 TAAACACTTTCTC-CCTATTAGCATAAATGAT-TTTATTGATTTTCTTTTGCATGAAAATC-TTT
510 TAAACACGTTCTCGCCT-CTAGAATAAATGATATTGATGGATTTTCTTTTACAAGAAAA-CGTTT
* *
224868 CCTTCGCAC-TATTTTCCTTAAAATCAAAATTCATCCCTTATC-TAAGATAAGCATCGATTCTCA
573 CCTTCGC-CTTATTTTCCTTAAAATCAAAATTCATCCC--ATCATAAGACAAGCATCAATTCTCA
* ** * * *
224931 TACCAATCTCCAT-TGTTTTCAAGATTGGGAACCAAGAA-CACAT-TCCTTTTACTAGGATACAT
635 TAACAATCTCC-TCTCCTTTCAAGATTGGGAACCAA-AAGCACATAACC-TTCACTAGGATACAA
* * * * * *
224993 GACATTGATGCTTTGG-TGTCACATGAAATGCTTTTATTTCCATC-GTTTTTG-ATGAAATCAAA
697 GACATTGACGCTTTGGCT-TCACATGAAAGGC-TTTATTCCCACCAATTTTTGTA-G-AACCAAA
* * *
225055 ATTTGT-CTCTTAAAT-AAGATAAACAAGAATAG
758 ATTCGTGC-CTCAAATGAA-ACAAACAAGAATAG
* * * ** * **
225087 TCGTACTAATCCTCACTC-TTTTCAAGATTAGGCAC-ATAAACATATTCTTTTCATAAGGATACT
1 TAGTAATAATCCTCACTCATTTT-AAGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAA
225150 TGATATTGA
65 TGATATTGA
225159 CGCTTTGGTT
Statistics
Matches: 707, Mismatches: 131, Indels: 53
0.79 0.15 0.06
Matches are distributed among these distances:
790 7 0.01
791 268 0.38
792 411 0.58
793 19 0.03
794 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (789 bp):
TAGTAATAATCCTCACTCATTTTAAGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
GATATTGATAATTTTCTTTTGCATGAAAATCTTTCTTCTGCCCTATTTTCCTTAAAATCAAAATT
CATCCCTTAAATAAGACAAGCATCGATTCTCATAACAATCTCCATTCTTTTCAAGATTGAAGCAA
AAGACACATTTCATTATTCGGATACATGACAATAATGCTTTAGGGTAGCAAGAATAAGTTTTACT
TCCACCATTTTTAATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCATACTAA
TCCCCATTCTTTTGAGGATTAGGCACCACAAACATAGTCTTCGAATAAGGATACACAATATTAAC
GCTCTCGTTTCGCAAGAAAGGCTTTTTCCCCCTAATTTTTGTAGACTCTAAGATCGCACTTAAAT
AAGACAAAAATAGATTCTAGCAATGATCTTCATTCATTTAGTCGTTAGACACTATAAACACGTTC
TCGCCTCTAGAATAAATGATATTGATGGATTTTCTTTTACAAGAAAACGTTTCCTTCGCCTTATT
TTCCTTAAAATCAAAATTCATCCCATCATAAGACAAGCATCAATTCTCATAACAATCTCCTCTCC
TTTCAAGATTGGGAACCAAAAGCACATAACCTTCACTAGGATACAAGACATTGACGCTTTGGCTT
CACATGAAAGGCTTTATTCCCACCAATTTTTGTAGAACCAAAATTCGTGCCTCAAATGAAACAAA
CAAGAATAG
Found at i:226966 original size:947 final size:945
Alignment explanation
Indices: 224187--228157 Score: 4331
Period size: 947 Copynumber: 4.2 Consensus size: 945
224177 GCATATAACC
* * * *
224187 TTCATTAGGATACAAGATATTGACGCTTTGGCTTCACATGAAAGGCTTTCTTCCCCCCAATTTTT
1 TTCATAAGGATACAAGATATTGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCTCAATTTTT
* *
224252 GTAGAGCCTAAGTTCGTGCCTCAAATGAAACAAACATGGATTGTAGTAATGATCTTCATTCATTT
66 GTAGAGCCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
224317 TGAGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTGATGGTTTTCTTTTGC
131 TGAGATTAGGCACTATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGC
* *
224382 ATGAAAATCATTTTTTTCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAACTAAGGCAAGCAT
196 ATGAAAATC-TTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAACTAAGACAAGCAT
* * * * * * *
224447 CGATTCTCGTAACAGTCTCCATTCTTTTGAGGATTTGCAAGCAAAAGCACATTCAATTGATTGGG
260 CGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATTGGG
* * * * * *
224512 ATGCATGACAATAATGCTTTAGTGTTGCAAGAAAAGGTTTTCCTTCCACCATTTTTGATTGAATC
325 ATACATGACATTGATGCTTTGGTG-T-C--G-CAAGGTTTTCCTTCCACCATTTTTGATAGAATC
* * * *
224577 ATAGTTTGTCTCTTAAATAAGACAAACATGAGTAGTCGTTCTAATCCCCATTCTTTTC-GAGATT
385 AAAGTTTATCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTCAG-GATT
* * ** ** * *
224641 AGGCT-TCACAAACATTGTCTTCGAATAAGGATACACAATATTGATGCTTTCGTTTTGCAAGAAA
449 AGGCTACCATAAACATTGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGTAAGAAA
* * * *
224705 GGCTTTCTT-CCCCCAATTTTTGTAGACTCTATGTTCATGCCTTAAATGAGACAAAAATGGATTC
514 GGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTC
* *
224769 TAGCAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCC-CTATTAGCATAAA
579 TAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTC-ATTAGGATAAA
* * * * *
224833 TGAT-TTTATTGATTTTCTTTTGCATGAAAATCTTTCCTTCGCACTATTTTCCTTAAAATCAAAA
643 TGATATTGA-TGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAAAA
* * * *
224897 TTCATCCCTTATC--TAAGATAAGCATCGATTCTCATACCAATCTCCATTGTTTTCAAGATTGGG
707 TT-ATCCC--ATCAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGG
** * * * *
224960 AACCAAGAACACATTCCTTTTACTAGGATACATGACATTGATGCTTTGGTGTCACATGAAATGCT
769 AACCAAGAACACATTCCCGTTACTAGGATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCT
* * * * *
225025 TTTATTTCCATCGTTTTTGAT-GAAATCAAAATTTGTCTCTTAAATAAGATAAACAAGAATAGTC
834 TTTATTTCTACCGTTTTTGATAG-AATCAAAATTTGTCTCTTAAATAAAACAAACATGAATAGTC
** * * *
225089 GTACTAATCCTCACTCTTTTCAAGATTAGGCA-CATAAACATATTCTT
898 ACACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTT
** ** *
225136 TTCATAAGGATACTTGATATTGACGCTTTGGTTTTGCAAGAAAGGCTTTGTTCCCC-CTAATTTT
1 TTCATAAGGATACAAGATATTGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCTC-AATTTT
* * * * * * *
225200 TGTAGAGTCTACGTCCATACCTCAAACGAGACAAACGTGGATTCTAGTAATGATCTTCATTCATT
65 TGTAGAGCCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATT
* * * *
225265 TTGTAG-TTAGGCACTATAAAAACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTG
130 TTG-AGATTAGGCACTATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTT
* * * * *
225329 GCAAGGAAATATCTCTTTTGCCCTATTTTCCTTAAAATCAAAATTCAT-CTTGTAAATAAGATAA
194 GC-ATGAAA-ATCTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCT-TAACTAAGACAA
* * *
225393 GCATCGATTCTCATAACAGTCTCCTTTCTTTTTAAGATTGGGAAGCAAAAGCACATTCCCTTCAT
256 GCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCAT
** * * * * * * *
225458 CAGAATACCTGAC-TTGGATACTTTGGTGTCGCGAGAAAAGATTTTCCATCCATCGTTTTTGATA
321 TGGGATACATGACATT-GATGCTTTGGTGTCGC-----AAGGTTTTCCTTCCACCATTTTTGATA
* * *
225522 GAATCAATGTTTATCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCGTTATTTTCAG
380 GAATCAAAGTTTATCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTCAG
* * * * * * *
225587 GATTAGGC-ACCATAACCATTATCTTATCATAAAGATACATGATATTGATGCTTCGATTTCGTAA
445 GATTAGGCTACCATAAACATTGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGT-A
* * * ** * *
225651 AAAAAAGTTTTCTTTTCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACTTG
509 AGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATG
* * * * * * *
225716 GATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGAAATTGTAAGCACTTTCTCCTTATTGGGA
574 GATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGA
* * * * *
225781 TAAAGGATAATGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCACAAAATCA
639 TAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCATAAAATCA
** * * * * * * *
225846 AAATTGCCTCCTTCAATAAGGCAAGCGTCGGTTCTCGTAATAGCCTCCATTCTTTTCAAGATTGG
704 AAATTATC-CCATCAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
* * * * *
225911 AAACCAAGAACACATTCTCGTTATTAGGAAACATGACATTGACGCTTTGGTGTCGTAAGAAAAGC
768 GAACCAAGAACACATTCCCGTTACTAGGATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGC
* * *
225976 TTTTATTTCCT-CCGTTTTTTATATAATCAAAATTTGTCTCTTAAATAAAACAAACCTGAATAGT
833 TTTTATTT-CTACCGTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAAACAAACATGAATAGT
* *
226040 CACACTAATCCCTATT-TTGTTCAAGATTAGGCACCATAAACGTAGTCTT
897 CACACTAATCCCCATTCTT-TTCAAGATTAGGCACCATAAACATAGTCTT
*
226089 TTCATAAGGATACAAGATAATGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCTCAATTTTT
1 TTCATAAGGATACAAGATATTGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCTCAATTTTT
* * *
226154 GTAGAGCCAAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCATT-GTTCATT
66 GTAGAGCCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC-TTCATTCATT
* ** *
226218 TTGTGATTAGAAAATATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTG
130 TTGAGATTAGGCACTATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTG
* *
226283 CATGAAAATCTTCTCTTTGCTCTATTTTCCTTAAAATCAAAATTCATCCCTTAACCAAGACAAGC
195 CATGAAAATCTT-T-TTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAACTAAGACAAGC
* * * * * * * *
226348 ATCGA-TCCCTGTAATAGTCTCCATTCTTTTCAGGATTAGGAAGCAAAAGCATATTCCCTCCATT
258 ATCGATTCTC-ATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATT
* * * * *
226412 TGGATACATGTCATTGATGCTTTGGTGTCGCAAGGTTTTCTTTCGACC-TTTTCTTATAGAATCA
322 GGGATACATGACATTGATGCTTTGGTGTCGCAAGGTTTTCCTTCCACCATTTT-TGATAGAATCA
* * * * * *
226476 AAGTTTGTCTCTTAAATAAGATACACATGAGCAGTTATACTAATCCCCATTCTTTTCAGGATTAC
386 AAGTTTATCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTCAGGATTAG
* * * * * * *
226541 G-TACCCTAAACAGTGTTTTCTCGTTAGGATACATGATATTGATGGTTTGGTTTTGTACGAAAGG
451 GCTACCATAAACATTGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGTAAGAAAGG
* * * * * * * *
226605 CCTTCTTCCCCCCAATTTTTGTCGAGTCCATGTTTATGCCTCAAATGAGACAAACACGAACTCTA
516 CTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTA
**
226670 GTAATGATCTCAGCTT-ATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATG
581 GTAATGATCTTTG-TTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATG
* * * *
226734 ATATTGAAGACTTTT-TTTTGCATGGAAATTTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATT
645 ATATTGATGA-TTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAAAATT
* * ** *
226798 AATCCCATCAATAAAACAAGCATCGATTCTCGTAACAGTCTATATTCTTTTGAAGATTGGGAACC
709 -ATCCCATCAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACC
* * ** *
226863 AAGAGCACATTCCCATT-CTACGGATACATGACATTGACGCTTTGGTG-CAGCAAGAATTGTTTT
773 AAGAACACATTCCCGTTACTA-GGATACATGACATTGACGCTTTGGTGTC-GCAAGAAAAGCTTT
* * * ** * *
226926 TATTTCTACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAGGACAACCACT-AATAGTCAT
836 TATTTCTACCGTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAAACAAACA-TGAATAGTCAC
* * * * * *
226990 AGTAATCCCCATTCTTTTTAGGATTAGGCGCTATAAAGATAGTCTT
900 ACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTT
* ** * *
227036 TTCATTAGGATACTCGATATTGACGCTTTGCTTTCGCAAGAAAGGCTTTCTT-CCCTCCAATTTT
1 TTCATAAGGATACAAGATATTGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCT-CAATTTT
* * *
227100 TGTAGCGTCTAAGTTCGTGCCTTAAATGAGACAAA-ATGGATTCTAGTAATGATCTTCATTCATT
65 TGTAGAGCCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATT
* * * *
227164 CTGAGATTAGGCACTATAAACACATTCTCCTC-TAAAGGATAAATGAAATTGGTGGTTTTCTTTT
130 TTGAGATTAGGCACTATAAACACATTCTCCTCATTAA-GATAAATGATATTGATGGTTTTCTTTT
* *
227228 GCATGAAAATAATTTCTTTGCCCTATTTTCCTTAAAAGCAAAATTCATCCC----CTAAGACAAG
194 GCATGAAAAT-CTTT-TTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAACTAAGACAAG
227289 CATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATT
257 CATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATT
* * ** * *
227354 GGGATACATGACATTGATGCGTTGGTGTCCCAAGAAAACGTTTTCCGACCACCATTTTTTATAAA
322 GGGATACATGACATTGATGCTTTGGTGTCGCAAG-----GTTTTCCTTCCACCATTTTTGATAGA
* *
227419 ATCAAAGTTTATCTCTTAAATAAGACAAACATGAGTAGTCGA-ACT-ATCCCCATTTTTTTTTAG
382 ATCAAAGTTTATCTCTTAAATAAGACAAACATGAGTAGTC-ATACTAATCCCCA-TTCTTTTCAG
* * * * * * *
227482 GATTATGCT-CCATAAACATTGTTTTCTAATAGGGATACATGATATTGATGCCTTAGATTTGTAA
445 GATTAGGCTACCATAAACATTGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGTAA
** * * * * * *
227546 GAAACACTTTCTTCCCTCAAATTTTTGTAAAGTCTAAGTCCGTGCCTTAAATGAGACAAACATGG
510 GAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGG
* * *
227611 ATTTTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTATGAG
575 ATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGAT
* * *
227676 AAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCATAGACTCAA
640 AAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAA
* * ** * *
227741 AATTTATCCCTTCAATAAGATAAGCATCGATTCTCATAACAGTCTTTATTCTCTTCATGATTGGG
705 AA-TTATCCCATCAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGG
* ** * * *
227806 AACCAAGAACATATTCTTGTTATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAAGCT
769 AACCAAGAACACATTCCCGTTACTAGGATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCT
* * * * * *
227871 TTTATTT-TCACTGTTTTTGATATAATCAAAGTTTGTCTCTTAAATGAAATAAACATGAATTGTC
834 TTTATTTCT-ACCGTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAAACAAACATGAATAGTC
* * ** *
227935 GCACTAATCCCCATTCTTTTCAGGATTAGGCACTGTAAACATAGTTTT
898 ACACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTT
* *
227983 TTCACAAGGATAC---A-A--GA-----T-G--------G--A----TTCTTCCCCACAATTTTT
1 TTCATAAGGATACAAGATATTGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCTCAATTTTT
* * * ** *
228022 GTAAAGTCTAACTTTATGCCTCAATTGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTT
66 GTAGAGCCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * * ** *
228087 TCAGATTAGGCACTATAAACACTTTCTACTCATTAGGATAAATGATATTCTTGATTTTCTTTTGC
131 TGAGATTAGGCACTATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGC
228152 ATGAAA
196 ATGAAA
228158 TTGGTGCTTT
Statistics
Matches: 2524, Mismatches: 432, Indels: 159
0.81 0.14 0.05
Matches are distributed among these distances:
921 40 0.02
922 91 0.04
923 2 0.00
925 1 0.00
927 1 0.00
936 1 0.00
941 2 0.00
942 92 0.04
943 4 0.00
944 1 0.00
945 5 0.00
946 147 0.06
947 910 0.36
948 143 0.06
949 173 0.07
950 248 0.10
951 23 0.01
952 338 0.13
953 295 0.12
954 7 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (945 bp):
TTCATAAGGATACAAGATATTGACGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCCTCAATTTTT
GTAGAGCCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTT
TGAGATTAGGCACTATAAACACATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGC
ATGAAAATCTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAACTAAGACAAGCATC
GATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCATTCATTGGGA
TACATGACATTGATGCTTTGGTGTCGCAAGGTTTTCCTTCCACCATTTTTGATAGAATCAAAGTT
TATCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCTAC
CATAAACATTGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTC
TTCCCCCCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAT
GATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTG
ATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAAAATTATCCCAT
CAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAACAC
ATTCCCGTTACTAGGATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCTACC
GTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAAACAAACATGAATAGTCACACTAATCCCCA
TTCTTTTCAAGATTAGGCACCATAAACATAGTCTT
Found at i:229787 original size:475 final size:474
Alignment explanation
Indices: 228151--237497 Score: 10006
Period size: 475 Copynumber: 19.7 Consensus size: 474
228141 TTTTCTTTTG
* * * * *
228151 CATGAAATTGGTGCTTTGGTATCGCAAGGAAAAGTTTTCTTTCCACTGTTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAA-GAAAAGTTTTATTTCCACCGTTTTTGATAGAATCAAA
* * * * * * *
228216 GTTTGTCTATTAAATAAGGCAAACATAAATAGTCATACTAATCCCTAATGTTTACAGGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * * * ** *
228281 ACCATAAA-TTAGTCTTTTCATAAGGATACGAGATATTGACGCTTTTGTTTTACAAGAAAAGCTT
130 ACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * * * * * *
228345 TCTTCCCCACAATTTTTGCAAAGTCTAAGATCATACCTCGAATGAGACAAACATGGATTCTAGTA
195 TCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
** * * * * * *
228410 ATGATCTTCATTCATTTTGTGGTTTGGCACTATAAACACATTCTCCTCATTAGGATAAAAGGTAT
260 ATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATAT
* * *
228475 TGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGTCC-TAGTTTCCATAAAATCAAAATTCATC
325 TGATGATTTTCTTTTGCATGAAAATCTTTTCTTTG-CCTTATTTTCCTTAAAATCAAAATTCATC
* * * * *
228539 CCTTCA-ATAAA-ACAAGTATCGATTCTTGTAACAGTCTGCATTCTTTTCAAGGTTGGGAACCAA
389 CCTT-ATA-AAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAA
* *
228602 GAACATATTCTCGTT-ATTAGGATA
452 -AACACATTC-CCTTCATTAGGATA
* *** * * *
228626 CATGACATTGATGCTTTGGTATCATGAGAAAAGCTTTTATTTTCACCATTTTTGATAGGATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG-TTTTATTTCCACCGTTTTTGATAGAATCAAA
* * * **
228691 GTTTGTCTCTTAAATAAGACAAACTTGGATTGTCGCACTAAT-CCCATTCTTTTCAGGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * * * * ** * * * * * *
228755 ACCGTAAGCATTGTATTTCCGCAAGCATATAAGATGTTCACGCCTTGG-TTCGCAAGAAAGGCTT
130 ACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * *
228819 CCTTCCCCCTAATTTTTGTAG-GTCTAAGTTCGTGCATCAAATGAGACAAACATGGATTCTAGTA
195 TCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* * * *
228883 GTGATCTTTGATT-ATTTTGTGATTAAACACTATAAACACTTCCCCCTCATTAGGATAAATGATA
260 ATGATCTTTG-TTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATA
* ** * * *
228947 ATGACAATTTTTTTTTGCATGAAAATCTTTTCTTTGTCTTATTTTCCTTAAATTCAAAATTCATC
324 TTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCATC
* * *
229012 CCTTA-AATAAGATAAGCA-CTATTCTCGTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCAAA
389 CCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAA
* * *
229075 GGCACTTTTCCTTCATTAGGATA
453 -ACACATTCCCTTCATTAGGATA
* * * *
229098 CATGACATTGGTGCTTTGGTGTCGTAGGAAAAGTTTTTATTTCCATCGTTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG-TTTTATTTCCACCGTTTTTGATAGAATCAAA
*
229163 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCTCAATT-TTTTCAGGATTAGG
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC-CCATTCTTTTCAGGATTAGG
* * * * * *
229227 CACCATAAACGTTGTCTTTTCACAAGCATATAAGATGTTGATGCTTTGG-TTCGCAAGAAAGGCT
129 CACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCT
* * * * * * *
229291 TCCTTCCACTCAATTTTTGTAGAGTCTAAGTTTGCGCCTAAAATGAGAGAAACATGGATTCTAGT
194 TTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* *
229356 AATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCTTCATTAGGATAAGTGATA
259 AATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATA
* *
229421 TTGATGATTTTCTTTTGCATGAAAATCTTTTCGTTGCCTTATTTTCCTTAAATTCAAAATTCATC
324 TTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCATC
** * * * * ** * * *
229486 TTTTATCAAAGACAAGCACCAAATCTTATAACAATCTCCAATCTTTTCAAGATTGGGAACCAACA
389 CCTTATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAA-A
*
229551 ACACATTCCCGTT-ATTAGAATA
453 ACACATTCCC-TTCATTAGGATA
* * *
229573 CATGACATTGATGCTTTGGTGTCGCAAGAAATGCTTTTATTTCAATCGTTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG-TTTTATTTCCACCGTTTTTGATAGAATCAAA
* * ** *
229638 ATTTGTCTCTTAAATAAGACAAACAAGAATAGTCGCACTAATCCCCATTCTTTTAAGGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* ** * *
229703 A-CAAAAACATAGTCTTTTCATAAGGATACTTGATATTAATGCTTTGGTTTTGCAAGAAAGGCTT
130 ACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * * * * * * *
229767 TATTCTCCCTAATTTTTGTAGAGTCTAAATCCGTACCTCAACTGAGGCAAACATGGATTCTAGTA
195 TCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* ** * * * * * * *
229832 ATGACCTTCATTCATTTTGTGGTTAGGCACTATATACTCATTCTCCTTATTAGGATAAATGATAA
260 ATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATAT
* * * *
229897 TGATAATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTT-CTATAAAGTCAAAATTCATC
325 TGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAATTCATC
* * * * *
229961 CCTTCA-ACAAGACAAGCATCAATTCACATAACAGTCTCCATTCTTTTCAAGATTAGGAA-CTAA
389 CCTT-ATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGC-AA
*
230024 GAACACATTCTCATT-ATTAGGATA
452 -AACACATTC-CCTTCATTAGGATA
* * * * * * * *
230048 CATGACATTGATGCCTTGGTGTGGTAAAAAAAGCTTTTATTTCCTCAGTTTTTGATAAAATCGAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG-TTTTATTTCCACCGTTTTTGATAGAATCAAA
* * * *
230113 GTTTGTCTCTCAAATAAGACAAACATGAATAGTCACACTAATCCCCTTTCTTTTCAGGATTAGGT
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
*
230178 ACCATAAACATAGTCTTTTC------AT--AAG-----GATGCTTTGGTTTCGCAAGAAAAGCTT
130 ACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * * *
230230 TCTTCCCCCTC-ATTTTTGTAAAGTCCACGTTCGTGCCTCAAATGAAACAAACATGGATTCTAGT
195 TCTTCCCCC-CAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* *
230294 AATAATCTTTGTTCATTTTGTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATA
259 AATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATA
* * * *
230359 TTGATGGTTTTCTTTTGCATTAAAATCTTTTCCTCG-CTCTATTTTCCTTAAAATCAAAATTCAT
324 TTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCT-TATTTTCCTTAAAATCAAAATTCAT
* * *
230423 CCCTTA-ACCAAGACAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAA
388 CCCTTATA-AAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAA
230487 AAGCACATTCCCTTCATTAGGATA
452 AA-CACATTCCCTTCATTAGGATA
* * *
230511 CATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTTTTTCCACTGTTTTTGATAGAATTAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTTATTTCCACCGTTTTTGATAGAATCAAA
* * * * * * *
230576 GTTTGTCTCTTAAAAAAGATAAACATGAGTAGTCGTACTAATCCCTATTCTTTTCAAGATTAGGT
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * * * *
230641 ACCATAAACAT-TTCCTTCTCATAAGGATACATGATATTGATGGTTTGGCTTT-GTAAGAAAGGC
130 ACCATAAACATAGT-CTTTTCATAAGGATACAAGATATTGATGCTTTGG-TTTCGCAAGAAAGGC
* * *
230704 TTTATTCCCCCCAATTTTTGAAGAGTCTAAGTTTAG-GCCTCAAATGAGACAAACATGGATTCTA
193 TTTCTTCCCCCCAATTTTTGTAGAGTCTAAG-TTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * * * *
230768 GTAACGATCTTTGCTCGTTTTGTGACTAGACACTATAAACACATTCTCCTCATTAGGATAAATGA
257 GTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGA
* * *
230833 TATTGATGACTTT-TTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTAA
322 TATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCA
* ** * *
230897 TCCAATTAGT--AAGACAAGCATCGATTCTCGTAACAGTCTTTATTCCTTTT-ATGATTGGGAAC
387 TCC-CTTA-TAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATT-CTTTTCAAGATTGGGAAG
* * * * *
230959 CTAGAGCACATTTCCATT-ATTCGGATT
449 C-AAAACACA-TTCCCTTCATTAGGATA
* * ** *
230986 CAAGACATTGATGCTTTGGTGTTGCAAGAATTGTTTTTGTTTCCACCGTTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG-TTTTATTTCCACCGTTTTTGATAGAATCAAA
* * ** * *
231051 GTTTGTCACTTAAATAAGACAAACATGAATTGTCGCACTAA-CCCTTATTCTTTTTAGGATTAGG
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCC-CATTCTTTTCAGGATTAGG
* * * * * *
231115 CACCATAAGCATAGTCTTTTCACAAGGATATAAGATATTAATGCTTTGATTTTGCAAGAAAGGCT
129 CACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCT
* *
231180 TTCTTCCCCCCAATTTTTGTAGAGCCTAAGTTCGTGCCTCAAATGAGACAAACATTGATTCTAGT
194 TTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * * * *
231245 AATGATCTTTGTTCATTTTGTAATTAGACATTACT-AACACTTTCTCCTTATTAGCATAAATAAT
259 AATGATCTTTGTTCATTTTGTGATTAGACACTA-TAAACACTTTCTCCTCATTAGGATAAATGAT
* * * * ** * *
231309 ATTGTTGATTTTTTTTTCCAT-AGAAATCTTTACTTTGCCCAATTTTCCTTTAATTCAAAATTCA
323 ATTGATGATTTTCTTTTGCATGA-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCA
* *
231373 TCCCTTA-AATAAGACAAG----G----TC-T--C---CT---TTCTTTTCAAAATTAGGAAGCA
387 TCCCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCA
* ** * *
231420 AAGGCATTTTTCTTTCATTAGGATA
451 AA-ACACATTCCCTTCATTAGGATA
* * * *
231445 CATGACATTGGTGCTTTGGTGTCGCAAGAAAAGCTATACTTTCCACCGTTTTTGATAGAATGAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAGTTTTA-TTTCCACCGTTTTTGATAGAATCAAA
* *
231510 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCGTACTAAT-CCCATTCTATTCAGGATTAAGG
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATT-AGG
** * ** *
231574 -ACCATAAACATAGTCTTTTCATAA-GATACCCGATATTCATGCTTTGGTTTCATAGGAAAGGCT
129 CACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCT
*
231637 TTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGT
194 TTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
** ** * * * * *
231702 AATGATCTTCATTCATTTTCAGATTAGCCACTATAAACACATTCTCTTCTTTAGGAAAAATGATA
259 AATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATA
* * * *
231767 TTGATGGTTTTCTTTTACATGAAAATCATTTCTTTACCTTA-TTTCCTTAAAATCAAAATTCATC
324 TTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCATC
* * * *
231831 CCTTA-AATATGACAAGCATAGATTATCATAACAGTCT-CATTTCTTTTCAAGATTGGGAAGCTA
389 CCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCA-TTCTTTTCAAGATTGGGAAGC-A
* *
231894 AAGCAAATTCCCTTCATTAGGATA
451 AAACACATTCCCTTCATTAGGATA
* * * * *
231918 CATGGCATTGATGCTTTGGTGTCACAAGAAAAGGTTTTCTTTCCATCATTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTTATTTCCACCGTTTTTGATAGAATCAAA
* * ** *
231983 GTTTGCCTCCTAAATAAGACAAACACAAATAGTCATACTAAT-CCCATTCTATTCAGGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * * * * **
232047 ACCATAAACATAGTCTTTTTATATGGATACATGATATTCATGCTTTCGTTTCATAAGAAAGGCTT
130 ACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * *
232112 TCTT-CCCCCAATTTTTGTAGAGTCTAAGTTAGTGCATCAAATAAGACAAACATGGATTCTAGTA
195 TCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
*
232176 ATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTTATTAGGATAAATGATAT
260 ATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATAT
* *
232241 TGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGTCC-TATTTCCCTTAAAATCAAAACTCATC
325 TGATGATTTTCTTTTGCATGAAAATCTTTTCTTTG-CCTTATTTTCCTTAAAATCAAAATTCATC
* * * * *
232305 CCTTAAAAAAGACAAGCATAGATTCTCATAACATTCTCCTTTCTTTTCAAGATTGGGAAGCAAAA
389 CCTTATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAA
*
232370 CCACATTCCCTTCATTAGCATA
454 -CACATTCCCTTCATTAGGATA
* *
232392 CATGGCATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTTATTTCCACCGTTTTTGATAGAATCAAA
* * *
232457 GTTTGTCTCTTAAATATGACAAACACGAATAGTCATACTAATCCCTATTCTATTT-AGGATTAGG
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT-TTTCAGGATTAGG
* * *
232521 CACCATAAACATAGTCTTTTCATAAGAATACAAGATATT-A-ACGTTGCAGTTTCGCAAGAAAGG
129 CACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTG--GTTTCGCAAGAAAGG
* * * * * *
232584 CTTTCTTCCCCTCAATTTTTGTAAAGTCTAAGTTTGTGCCTAAAATAAGACAAACATGGATTCTT
192 CTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * * * *
232649 GTAATAATCTTTGTTCATTTTATGATTAGACACTGTAAATACTTTCTCCTCATTAGGGTAAATGA
257 GTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGA
* * * * *
232714 TATTGTTGATTTTCTTTTGCATGGAAATCATTTCTTTG-CTCAATTTTCCTTAAATTCAAAATTC
322 TATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCT-TATTTTCCTTAAAATCAAAATTC
*
232778 ATCCC-TAAAATAAGACAAGC-TCGATTCTCGTAACAGTCTCC-TCTCTTTTCAAGATTGGGAAG
386 ATCCCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCAT-TCTTTTCAAGATTGGGAAG
* * * * *
232840 TAAAGGCACTTTTCCTTCATTTGGATA
449 CAAA-ACACATTCCCTTCATTAGGATA
* ** * * * * **
232867 TATGACATTGGCGCTGTGGTGCCGCATGAAAAGTTCTTCTTTCCACTATTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAGTT-TTATTTCCACCGTTTTTGATAGAATCAAA
* * * * *
232932 GTTTATCTCTTAACTAAGACAAACATGAATAGCCATACTAATCACCATTCTTTTTAGGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * * * ** **
232997 TCCACAAACATTA-TCTTCTAAT-AGGTATACACCATATTGATGC-TTGGATTT-GTTAGAAAGG
130 ACCATAAACA-TAGTCTTTTCATAAGG-ATACAAGATATTGATGCTTTGG-TTTCGCAAGAAAGG
** * * *
233058 CTTTCTTCCCCCCCTTTTTTGTAGAGTCTAAGTTCATGCCTTAAATGAGACAAACAAGGATTCTA
192 CTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* *
233123 GTAATGATCTTTGTTCATTTTGTGATTAGACACTGTATACACTTTCTCCTCATTAGGATAAATGA
257 GTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGA
* * *
233188 TATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTACTTTCCTTAGAATCAAAATTTA
322 TATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCA
* * * * * * *
233253 TCCCTTCA-ATAAGCCAAGCATCAATTCTCGTAAGAGTCTCCATTCTTTTCAAGGTCGGGAACCA
387 TCCCTT-ATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCA
* *
233317 AGA-ACATT-CCTGTTATTAGGATA
451 AAACACATTCCCT-TCATTAGGATA
* * * * * * * *
233340 TATAACATTGATGCTTTGGTGTTGTAAGAATAGCTTTTATTTTCACCGTTTTTGACAAAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG-TTTTATTTCCACCGTTTTTGATAGAATCAAA
*
233405 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGTTTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * *
233470 ACCATAAACATAGTCTTTTCATAAGGATACAAGATAATG-TCACTTTGGTTTCGTAAGAAAGGCT
130 ACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGAT-GCTTTGGTTTCGCAAGAAAGGCT
* * * *
233534 TTCTTCTCCCCAATTTTTGTAGAGTCTAAGTCCGTGCCTCAAATAAGACAAACATGGATTATAGT
194 TTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* *
233599 AATGATCTTTGTTCATTTTGTGATTAGACATTATAAACACTTTCTCCTCATTAGGAAAAATGATA
259 AATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATA
* * * *
233664 TTGTTGATTTTCTTTTGCTTGGAAATCTTTTCTTTAACC-TATTTTCCTTAAAATCAAAATTCAT
324 TTGATGATTTTCTTTTGCATGAAAATCTTTTCTTT-GCCTTATTTTCCTTAAAATCAAAATTCAT
* * * * **
233728 CCTTTA-AATAAGACATGC-TTGATTCT-ATAACAGTCTCTTTTCTTTTCAAGATTGGGAAGCAA
388 CCCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAA
* *
233790 AAGCACTTTCCCTTCATTAGAATA
452 AA-CACATTCCCTTCATTAGGATA
* * * *
233814 CATGACATTGGTGCTTTGGTGCCGCAAGAAAAGGTTTACTTTTCACCGTTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAGTTTTA-TTTCCACCGTTTTTGATAGAATCAAA
* ** * *
233879 GTTTGTATCTTAAATAAGACAAACATGAATAGAAATGCTAATCCCCATTCTTTTCACGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * ** * *
233944 ACCATAAACATTA-TCTTCTCATAAGGATACACGATATTGATGGC-TTGACTTCGTAAGGAAGGC
130 ACCATAAACA-TAGTCTTTTCATAAGGATACAAGATATTGAT-GCTTTGGTTTCGCAAGAAAGGC
* * * * * * *
234007 TTTCTTACCACCAACTTTTGTAAAGTCTAATTTCGTGCCTCAAAAGAGACCAACATGGATTCTAG
193 TTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG
* * *
234072 TAATGATCTTTATTCATTTTGTGATTAGACACTATAAACACTTCCTCCTTATTAGGATAAATGAT
258 TAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGAT
* *
234137 ATTGTTCATTTTCTTTTGCATGAAAATCTTTTCTTTGCCATATTTTCCTTGCCATATTTTCCTTA
323 ATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTG---------CC-T----TATTTTCCTTA
* * * ** * *
234202 AATTCAAAATTCATCCTTTA-AATAAGACAAGC-TTGATTCTCGTAGTAGTCTTCTTTCTTTTCA
374 AAATCAAAATTCATCCCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCA
* * *
234265 AGATTGGGAAGCAAAAGCACTTTCCCTTCATTAGAATG
438 AGATTGGGAAGCAAAA-CACATTCCCTTCATTAGGATA
* * * * *
234303 CATGACATTG--GCATTTTTGTGTCCCAACAAAAGGTTTACTTTCCACCGTTTTTGATAAAATCA
1 CATGACATTGATGC--TTTGGTGTCGCAAGAAAAGTTTTA-TTTCCACCGTTTTTGATAGAATCA
* * * * * *
234366 AAGTTTATCTCTTAAATAAGACAAGCATGAATAGTCACACTAATCCCTATTCTTTTTAGTATTAG
63 AAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAG
** * ** * *
234431 GTGCCATAAACATAGTCTTTTCACAAGGATACAAGATATCAACGCTTTGGTTTCGCAAGAGAGGC
128 GCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGC
* * * *
234496 TTTCTTGCCCCTAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAG
193 TTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG
*** ** * * * * *
234561 TAATGATCTTCACTCATTTTCAGATTAGGCGCTATAAACACATTCTCCTCTTTATGATAAATGAT
258 TAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGAT
* ** *
234626 ATTGATGGTTTTCTTTTTTGCATGAAAATAATTTCTTTGCCCTATTTTCCTTAAAATC-AAATTC
323 ATTGATGATTTTC--TTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTC
** * * * * **
234690 ATCCCTTATCTAAGACAAGCATCGCTTCT-GTAATAGTCGCCATTCTTTTCAAGACTGAAAAGCA
386 ATCCCTTATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCA
* * * *
234754 AAAGCACAGTCCATTCTTTGGGATA
451 AAA-CACATTCCCTTCATTAGGATA
* * ** *** * *
234779 CATGACATTGATGCTTTGATGTCGGAAGAAAAGGTTTTCCTTCCACCAAATTTAATAAAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTTATTTCCACCGTTTTTGATAGAATCAAA
* *
234844 GTTTGTCTCTTAAATAAGACAAACATGAGTAGTCAAACTAATCCCCATTCTTTTCAGGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * * * ** *
234909 TCCATAAACTTTA-TCTTCT-AGTAGGGATACACCATATTGATGCTTTGGATTT-GTAAGAAAGG
130 ACCATAAAC-ATAGTCTTTTCA-TAAGGATACAAGATATTGATGCTTTGG-TTTCGCAAGAAAGG
* * * *
234971 CCTTCTTCCCCCCAATTTTTTTAGAGTCTAAATTCATGCCTCAAATGAGACAAACATGGATTCTA
192 CTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* *
235036 GTAATGATCTTTGTTCATTTTGTGAGTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGA
257 GTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGA
* * *
235101 TATTGATGATTTTCTTTTGCATGGAAATCTTTTTTTTTTGCCCTATTTTCCTTAAAATCAAAATT
322 TATTGATGATTTTCTTTTGCATGAAAATC--TTTTCTTTGCCTTATTTTCCTTAAAATCAAAATT
* * * **
235166 CATCCCTTA-AATAAGACATGC-TTGATTCT-ATAACAGTCTCTTTTCTTTTCAAGATTGGGAAG
385 CATCCCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAG
* *
235228 CAAAAGCACTTTCCCTTCATTAGAATA
449 CAAAA-CACATTCCCTTCATTAGGATA
* * * * *
235255 CATGACATTGGTGCTTTGATGCCGCAAGAAAAGGTTTACTTTTCACCGTTTTTGATAGAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAGTTTTA-TTTCCACCGTTTTTGATAGAATCAAA
* * ** * *
235320 GTTTGTATCTTAAAGAAGACAAACATGAATAGAAATGCTAATCCCCATTCTTTTCACGATTAGGC
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * * * *
235385 ACCATAAACATTA-TCTTCTCATAAGGATACACGATATTGATGGC-TTGGCTTCGTAAGGAAGGC
130 ACCATAAACA-TAGTCTTTTCATAAGGATACAAGATATTGAT-GCTTTGGTTTCGCAAGAAAGGC
* * * * * *
235448 TTTCTTACCACCAACTTTTGTAAAGTCTAATTTCGTGCCTCAAAAGAGACAAACATGGATTCTAG
193 TTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG
* * * *
235513 TAATGATCTTTATTCATTTTGTGATTAGACACTCTAAACACTTCCTCCTTATTAGGATAAATGAT
258 TAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGAT
* * *
235578 ATTGTTCATTGTCTTTTGCATGAAAATCTTTTCTTTGCCATATTTTCCTTGCATATTTTCCTTAA
323 ATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTG---------CC-T---TATTTTCCTTAA
* * * ** * * *
235643 ATTCAAAATTCATCCTTTA-AATAAGACAAGC-TTGATTCTCGTAGTAGTCTTCTTTCTTTTAAA
375 AATCAAAATTCATCCCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAA
* *
235706 GATTGGGAAGCAAAAGCACTTTCCCTTCATTAGAATA
439 GATTGGGAAGCAAAA-CACATTCCCTTCATTAGGATA
* * ** * * * * * *
235743 CATGACATTGGTGTTTTTTTGTCCCAACAAAAGGTTTACTTTCCATCGTTTTTGAAAAAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAGTTTTA-TTTCCACCGTTTTTGATAGAATCAAA
* * * * * * *
235808 GTTTATCTCTTAAATAAGAGAAGCATGAATAGTCACACTAATCCCTATTCTTTTTAGGATTAGGT
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGC
* * ** * *
235873 GCCATAAACATAGTCTTTTCACAAGGATACAAGATATCAACGCTTTGGTTTCGCAAGAGAGGCTT
130 ACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
* * *
235938 TCTTCCCCCTAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTA
195 TCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
*** ** * * * * *
236003 ATGATCTTCACTCATTTTCAGATTAGGCGCTATAAACACATTCTCCTCTTTATGATAAATGATAT
260 ATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATAT
* * ** *
236068 TGACGGTTTTCTTTTTTGCATGAAAATAATTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCAT
325 TGATGATTTTC--TTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCAT
** * * * * **
236133 CCCTTATCTAAGACAAGCATCGCTTCT-GTAATAGTCGCCATTCTTTTCAAGACTGAAAAGCAAA
388 CCCTTATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAA
* * * *
236197 AGCACAGTCCATTCTTTGGGATA
453 A-CACATTCCCTTCATTAGGATA
* * * *** * *
236220 CATGACATTGATGCTTTGATGTCGGAAGAAAAGGTTTTCTTTCCACCAAATTTAATAAAATCAAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTTATTTCCACCGTTTTTGATAGAATCAAA
* * *
236285 GTTTGTCTCTTAAATAAGACAAACATGAGTAGTCGA-ACTAATCCCTATTCTTTTCAGGGTTAGG
65 GTTTGTCTCTTAAATAAGACAAACATGAATAGTC-ATACTAATCCCCATTCTTTTCAGGATTAGG
* * * ** *
236349 CTCCATAAACATTA-TCTTTTAATAGGGATACACCATATTGATGCTTTGGATTT-GTAAGAAAGG
129 CACCATAAACA-TAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGG-TTTCGCAAGAAAGG
* * *
236412 CCTTCTTCCCCCCAATTTTTGTAGAGTCTAAATTCATGCCTCAAATGAGACAAACATGGATTCTA
192 CTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* *
236477 GTAATGATCTTTGTTCATTTTGTGAGTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGA
257 GTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGA
*
236542 TATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCA
322 TATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCA
* * * * *
236607 TCCCTCA-AATAAGACAAGC-TCGATTCTCATAATAGTCTCCTTTGTTTTCAAGATTGGGAAGCA
387 TCCCTTATAA-AAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCA
*
236670 AAAGCATATTCCCTTCATTAGGATA
451 AAA-CACATTCCCTTCATTAGGATA
* * * *
236695 CCTGACATTGATGCTTTGGCGTCGCAAGAAAAGGTTTTCTTTCC-CTCATTTTTGATAGAATCAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAA-GTTTTATTTCCAC-CGTTTTTGATAGAATCAA
* * *
236759 TGTTTGTCTCTTAAATAAAACAAACATGAGTAGTCATACTAAT-CCCATTCTTTTCTA-GATTAG
64 AGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AGGATTAG
* * *** *
236822 GCACTATAAACATAGCCTTTTCATAAGGATATTCGATATTGATGC-TT--TTTCCCAAGAAAGGC
128 GCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGC
* * * *
236884 TTTCTTCTCTCCAATTTTTGTAGAGTCTAAATTCATGCCTCAAATGAGACAAACATGGATTCTAG
193 TTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG
* *
236949 TAATGATCTTTGTTCATTTTGTGATTAAACACTATAAACACTATCTCCTCATTAGGATAAATGAT
258 TAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGAT
* * *
237014 ATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTT-TTTTCCATAAAATCAAAATACA
323 ATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTTG-CCTTATTTTCCTTAAAATCAAAATTCA
* * * * *
237078 TCCCTTCA-ATAAGATAAGCATCGATTCTTGTAACAGTCTCCATTTTTTTCAAGATTGGGAACCA
387 TCCCTT-ATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCA
237142 AGAACACATTCCCGTT-ATTAGGATA
451 A-AACACATTCCC-TTCATTAGGATA
** * * *
237167 CATGACATTGATGCTTTGGTGTCATAAAAAAAGCTTTTATTGT-CACCGTTTTTTATAAAATCAA
1 CATGACATTGATGCTTTGGTGTCGCAAGAAAAG-TTTTATT-TCCACCGTTTTTGATAGAATCAA
* * * * * *
237231 AGTTTGTCTCTTAAATAAGATAAGCATGAAT--TCTTGCATTAACCCCCATTCTTTTTAGGATTA
64 AGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAT--ACTAATCCCCATTCTTTTCAGGATTA
* * * * * * * * *
237294 GGTAGCATAAACATAGTCTTTTCACAAGGATATAAGATATTAACGCTTTGATTTTGCAAAAAAGG
127 GGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGG
* * * * * * *
237359 CTTTCTTCCCCCCAATTTCTGTAGAGCCTGAGTTCGTGCCTCAAGTGAAACAAACTTTGATTCTA
192 CTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * * *
237424 GTAATGATCTTTGTTCA-TTTGATGATTATACACTACAAACACTTTTTCCACATTAGGATAAATG
257 GTAATGATCTTTGTTCATTTTG-TGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATG
*
237488 ATATTAATGA
321 ATATTGATGA
237498 CATTGATGCT
Statistics
Matches: 7485, Mismatches: 1164, Indels: 445
0.82 0.13 0.05
Matches are distributed among these distances:
456 37 0.00
457 171 0.02
458 50 0.01
459 117 0.02
460 1 0.00
462 11 0.00
463 377 0.05
464 6 0.00
465 2 0.00
467 2 0.00
468 3 0.00
469 2 0.00
470 10 0.00
471 209 0.03
472 329 0.04
473 782 0.10
474 1325 0.18
475 1543 0.21
476 1258 0.17
477 419 0.06
478 18 0.00
481 2 0.00
482 4 0.00
483 2 0.00
487 54 0.01
488 379 0.05
489 328 0.04
490 22 0.00
491 22 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (474 bp):
CATGACATTGATGCTTTGGTGTCGCAAGAAAAGTTTTATTTCCACCGTTTTTGATAGAATCAAAG
TTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCA
CCATAAACATAGTCTTTTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTT
CTTCCCCCCAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
TGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATT
GATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTCATCCC
TTATAAAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAACA
CATTCCCTTCATTAGGATA
Found at i:234188 original size:14 final size:14
Alignment explanation
Indices: 234165--234200 Score: 63
Period size: 14 Copynumber: 2.6 Consensus size: 14
234155 CATGAAAATC
*
234165 TTTTCTTTGCCATA
1 TTTTCCTTGCCATA
234179 TTTTCCTTGCCATA
1 TTTTCCTTGCCATA
234193 TTTTCCTT
1 TTTTCCTT
234201 AAATTCAAAA
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
14 21 1.00
ACGTcount: A:0.11, C:0.25, G:0.06, T:0.58
Consensus pattern (14 bp):
TTTTCCTTGCCATA
Found at i:234916 original size:476 final size:475
Alignment explanation
Indices: 231391--237497 Score: 7028
Period size: 474 Copynumber: 12.8 Consensus size: 475
231381 ATAAGACAAG
* * * ** * * *
231391 GTCTCCTTTCTTTTCAAAATTAGGAAGCAAAGGCATTTTTCTTTCATTAGGATACATGACATTGG
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * * *
231456 TGCTTTGGTGTCGCAAGAAAAGCTATACTTTCCACCGTTTTTGATAGAATGAAAGTTTGTCTCTT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
* *
231521 AAATAAGACAAACATGAATAGTCGTACTAAT-CCCATTCTATTCAGGATTAAGG-ACCATAAACA
131 AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATT-AGGCACCATAAACA
* * * *
231584 TAGTCTTTTCATAA-GATACCCGATATTCATGCTTTGGTTTCATAGGAAAGGCTTTCTTCCCCCC
195 TAGTCTTTTCATAAGGATACACGATATTAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCCC
* * **
231648 AATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAATGATCTTCA
260 AATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTG
** * * * * *
231713 TTCATTTTCAGATTAGCCACTATAAACACATTCTCTTCTTTAGGAAAAATGATATTGATGGTTTT
325 TTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATTTT
* * * * *
231778 CTTTTACATGAAAATCATTTCTTTACCTTA-TTTCCTTAAAATCAAAATTCATCCCTTAAATATG
390 CTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAG
* * *
231842 ACAAGCATAGATTATCATAACA
455 ACAAGC-TCGATTCTCGTAACA
* * * *
231864 GTCTCATTTCTTTTCAAGATTGGGAAGCTAAAGCAAATTCCCTTCATTAGGATACATGGCATTGA
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * * * *
231929 TGCTTTGGTGTCACAAGAAAAGGTTTTCTTTCCATCATTTTTGATAGAATCAAAGTTTGCCTCCT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
** *
231994 AAATAAGACAAACACAAATAGTCATACTAAT-CCCATTCTATTCAGGATTAGGCACCATAAACAT
131 AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
* * * * * *
232058 AGTCTTTTTATATGGATACATGATATTCATGCTTTCGTTTCATAAGAAAGGCTTTCTT-CCCCCA
196 AGTCTTTTCATAAGGATACACGATATTAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCCCA
* *
232122 ATTTTTGTAGAGTCTAAGTT-AGTGCATCAAATAAGACAAACATGGATTCTAGTAATGATCTTTG
261 ATTTTTGTAGAGTCTAAGTTCA-TGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTG
232186 TTCATTTTGTGATTAGACACTATAAACACTTTCTCCT-TATTAGGATAAATGATATTGATGATTT
325 TTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCT-TTAGGATAAATGATATTGATGATTT
* * * *
232250 TCTTTTGCATGAAAATCTTTTCTTTGTCCTATTTCCCTTAAAATCAAAACTCATCCCTTAAAAAA
389 TCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
* *
232315 GACAAGCATAGATTCTCATAACA
454 GACAAGC-TCGATTCTCGTAACA
* * * *
232338 TTCTCCTTTCTTTTCAAGATTGGGAAGCAAAACCACATTCCCTTCATTAGCATACATGGCATTGA
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
232403 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
* * *
232468 AAATATGACAAACACGAATAGTCATACTAATCCCTATTCTATTT-AGGATTAGGCACCATAAACA
131 AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT-TTTCAGGATTAGGCACCATAAACA
* * * *
232532 TAGTCTTTTCATAAGAATACAAGATATTAA--CGTTGCAGTTTCGCAAGAAAGGCTTTCTTCCCC
195 TAGTCTTTTCATAAGGATACACGATATTAATGCTTTG--GTTTCGTAAGAAAGGCTTTCTTCCCC
* * ** * * * *
232595 TCAATTTTTGTAAAGTCTAAGTTTGTGCCTAAAATAAGACAAACATGGATTCTTGTAATAATCTT
258 CCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
* * * * * *
232660 TGTTCATTTTATGATTAGACACTGTAAATACTTTCTCCTCATTAGGGTAAATGATATTGTTGATT
323 TGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATT
* * * * * *
232725 TTCTTTTGCATGGAAATCATTTCTTTGCTCAATTTTCCTTAAATTCAAAATTCATCCCTAAAATA
388 TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATA
232790 AGACAAGCTCGATTCTCGTAACA
453 AGACAAGCTCGATTCTCGTAACA
* * * * * * * *
232813 GTCTCCTCTCTTTTCAAGATTGGGAAGTAAAGGCACTTTTCCTTCATTTGGATATATGACATTGG
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * * * ** *
232878 CGCTGTGGTGCCGCATGAAAA-GTTCTTCTTTCCACTATTTTTGATAGAATCAAAGTTTATCTCT
66 TGCTTTGGTGTCGCAAGAAAAGGTT-TTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * * * * *
232942 TAACTAAGACAAACATGAATAGCCATACTAATCACCATTCTTTTTAGGATTAGGCTCCACAAACA
130 TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
* * * * *
233007 TTA-TCTTCTAAT-AGGTATACACCATATTGATGC-TTGGATTT-GTTAGAAAGGCTTTCTTCCC
195 -TAGTCTTTTCATAAGG-ATACACGATATTAATGCTTTGG-TTTCGTAAGAAAGGCTTTCTTCCC
** * *
233068 CCCCTTTTTTGTAGAGTCTAAGTTCATGCCTTAAATGAGACAAACAAGGATTCTAGTAATGATCT
257 CCCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCT
* * *
233133 TTGTTCATTTTGTGATTAGACACTGTATACACTTTCTCCTCATTAGGATAAATGATATTGATGAT
322 TTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGAT
* * * * *
233198 TTTCTTTTGCATGAAAATCTTTTCTTTGCCTTACTTTCCTTAGAATCAAAATTTATCCCTTCAAT
387 TTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT
* * *
233263 AAGCCAAGCATCAATTCTCGTAAGA
452 AAGACAAGC-TCGATTCTCGTAACA
* * * * * * * *
233288 GTCTCCATTCTTTTCAAGGTCGGGAA-C-CAAGAACATT-CCTGTTATTAGGATATATAACATTG
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCT-TCATTAGGATACATGACATTG
* * * * * * * *
233350 ATGCTTTGGTGTTGTAAGAATAGCTTTTATTTTCACCGTTTTTGACAAAATCAAAGTTTGTCTCT
65 ATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCT
*
233415 TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGTTTAGGCACCATAAACA
130 TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
* * *
233480 TAGTCTTTTCATAAGGATACAAGATAATGTCA--CTTTGGTTTCGTAAGAAAGGCTTTCTTCTCC
195 TAGTCTTTTCATAAGGATACACGAT-AT-TAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCC
* * * *
233543 CCAATTTTTGTAGAGTCTAAGTCCGTGCCTCAAATAAGACAAACATGGATTATAGTAATGATCTT
258 CCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
* * * *
233608 TGTTCATTTTGTGATTAGACATTATAAACACTTTCTCCTCATTAGGAAAAATGATATTGTTGATT
323 TGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATT
* * ** *
233673 TTCTTTTGCTTGGAAATCTTTTCTTTAACCTATTTTCCTTAAAATCAAAATTCATCCTTTAAATA
388 TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATA
* * *
233738 AGACATGCTTGATTCT-ATAACA
453 AGACAAGCTCGATTCTCGTAACA
* * * *
233760 GTCTCTTTTCTTTTCAAGATTGGGAAGCAAAAGCACTTTCCCTTCATTAGAATACATGACATTGG
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * * *
233825 TGCTTTGGTGCCGCAAGAAAAGGTTTACTTTTCACCGTTTTTGATAGAATCAAAGTTTGTATCTT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
** * *
233890 AAATAAGACAAACATGAATAGAAATGCTAATCCCCATTCTTTTCACGATTAGGCACCATAAACAT
131 AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA-
* * ** * * *
233955 TA-TCTTCTCATAAGGATACACGATATTGATGGC-TTGACTTCGTAAGGAAGGCTTTCTTACCAC
195 TAGTCTTTTCATAAGGATACACGATATTAAT-GCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCC
* * * * * *
234018 CAACTTTTGTAAAGTCTAATTTCGTGCCTCAAAAGAGACCAACATGGATTCTAGTAATGATCTTT
259 CAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * *
234083 ATTCATTTTGTGATTAGACACTATAAACACTTCCTCCT-TATTAGGATAAATGATATTGTTCATT
324 GTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCT-TTAGGATAAATGATATTGATGATT
*
234147 TTCTTTTGCATGAAAATCTTTTCTTTGCCATATTTTCCTTGCCATATTTTCCTTAAATTCAAAAT
388 TTCTTTTGCATGAAAATCTTTTCTTTG----------C---CC-TATTTTCCTTAAAATCAAAAT
* * **
234212 TCATCCTTTAAATAAGACAAGCTTGATTCTCGTAGTA
439 TCATCCCTTAAATAAGACAAGCTCGATTCTCGTAACA
* * * *
234249 GTCTTCTTTCTTTTCAAGATTGGGAAGCAAAAGCACTTTCCCTTCATTAGAATGCATGACATTG-
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * * * * *
234313 -GCATTTTTGTGTCCCAACAAAAGGTTTACTTTCCACCGTTTTTGATAAAATCAAAGTTTATCTC
66 TGC--TTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * * * **
234377 TTAAATAAGACAAGCATGAATAGTCACACTAATCCCTATTCTTTTTAGTATTAGGTGCCATAAAC
129 TTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAAC
* * * * * * *
234442 ATAGTCTTTTCACAAGGATACAAGATATCAACGCTTTGGTTTCGCAAGAGAGGCTTTCTTGCCCC
194 ATAGTCTTTTCATAAGGATACACGATATTAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCC
* * *
234507 TAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTC
259 CAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
** ** * * * * *
234572 ACTCATTTTCAGATTAGGCGCTATAAACACATTCTCCTCTTTATGATAAATGATATTGATGGTTT
324 GTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATTT
** **
234637 TCTTTTTTGCATGAAAATAATTTCTTTGCCCTATTTTCCTTAAAATC-AAATTCATCCCTTATCT
389 TC--TTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT
* *
234701 AAGACAAGCATCGCTTCT-GTAATA
452 AAGACAAGC-TCGATTCTCGTAACA
* * * ** * * * *
234725 GTCGCCATTCTTTTCAAGACTGAAAAGCAAAAGCACAGTCCATTCTTTGGGATACATGACATTGA
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * * *** * *
234790 TGCTTTGATGTCGGAAGAAAAGGTTTTCCTTCCACCAAATTTAATAAAATCAAAGTTTGTCTCTT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
* * * *
234855 AAATAAGACAAACATGAGTAGTCAAACTAATCCCCATTCTTTTCAGGATTAGGCTCCATAAACTT
131 AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAAC-A
* * * * *
234920 TA-TCTTCT-AGTAGGGATACACCATATTGATGCTTTGGATTT-GTAAGAAAGGCCTTCTTCCCC
195 TAGTCTTTTCA-TAAGGATACACGATATTAATGCTTTGG-TTTCGTAAGAAAGGCTTTCTTCCCC
* *
234982 CCAATTTTTTTAGAGTCTAAATTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
258 CCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
*
235047 TGTTCATTTTGTGAGTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATT
323 TGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATT
* *
235112 TTCTTTTGCATGGAAATCTTTTTTTTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA
388 TTCTTTTGCATGAAAATC--TTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA
* * *
235177 TAAGACATGCTTGATTCT-ATAACA
451 TAAGACAAGCTCGATTCTCGTAACA
* * * *
235201 GTCTCTTTTCTTTTCAAGATTGGGAAGCAAAAGCACTTTCCCTTCATTAGAATACATGACATTGG
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * * * *
235266 TGCTTTGATGCCGCAAGAAAAGGTTTACTTTTCACCGTTTTTGATAGAATCAAAGTTTGTATCTT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
* ** * *
235331 AAAGAAGACAAACATGAATAGAAATGCTAATCCCCATTCTTTTCACGATTAGGCACCATAAACAT
131 AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA-
* * * * * *
235396 TA-TCTTCTCATAAGGATACACGATATTGATGGC-TTGGCTTCGTAAGGAAGGCTTTCTTACCAC
195 TAGTCTTTTCATAAGGATACACGATATTAAT-GCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCC
* * * * *
235459 CAACTTTTGTAAAGTCTAATTTCGTGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTT
259 CAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * * *
235524 ATTCATTTTGTGATTAGACACTCTAAACACTTCCTCCT-TATTAGGATAAATGATATTGTTCATT
324 GTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCT-TTAGGATAAATGATATTGATGATT
* *
235588 GTCTTTTGCATGAAAATCTTTTCTTTGCCATATTTTCCTTGCATATTTTCCTTAAATTCAAAATT
388 TTCTTTTGCATGAAAATCTTTTCTTTG---------CC---C-TATTTTCCTTAAAATCAAAATT
* * **
235653 CATCCTTTAAATAAGACAAGCTTGATTCTCGTAGTA
440 CATCCCTTAAATAAGACAAGCTCGATTCTCGTAACA
* * * * *
235689 GTCTTCTTTCTTTTAAAGATTGGGAAGCAAAAGCACTTTCCCTTCATTAGAATACATGACATTGG
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* ** * * * * * * *
235754 TGTTTTTTTGTCCCAACAAAAGGTTTACTTTCCATCGTTTTTGAAAAAATCAAAGTTTATCTCTT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
* * * * * **
235819 AAATAAGAGAAGCATGAATAGTCACACTAATCCCTATTCTTTTTAGGATTAGGTGCCATAAACAT
131 AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
* * * * * * *
235884 AGTCTTTTCACAAGGATACAAGATATCAACGCTTTGGTTTCGCAAGAGAGGCTTTCTTCCCCCTA
196 AGTCTTTTCATAAGGATACACGATATTAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCCCA
* ***
235949 ATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCAC
261 ATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGT
** * * * * * *
236014 TCATTTTCAGATTAGGCGCTATAAACACATTCTCCTCTTTATGATAAATGATATTGACGGTTTTC
326 TCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATTTTC
** **
236079 TTTTTTGCATGAAAATAATTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTATCTAA
391 --TTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
* *
236144 GACAAGCATCGCTTCT-GTAATA
454 GACAAGC-TCGATTCTCGTAACA
* * * ** * * * *
236166 GTCGCCATTCTTTTCAAGACTGAAAAGCAAAAGCACAGTCCATTCTTTGGGATACATGACATTGA
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * *** * *
236231 TGCTTTGATGTCGGAAGAAAAGGTTTTCTTTCCACCAAATTTAATAAAATCAAAGTTTGTCTCTT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
* * * *
236296 AAATAAGACAAACATGAGTAGTCGA-ACTAATCCCTATTCTTTTCAGGGTTAGGCTCCATAAACA
131 AAATAAGACAAACATGAATAGTC-ATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
* * * * *
236360 TTA-TCTTTTAATAGGGATACACCATATTGATGCTTTGGATTT-GTAAGAAAGGCCTTCTTCCCC
195 -TAGTCTTTTCATAAGGATACACGATATTAATGCTTTGG-TTTCGTAAGAAAGGCTTTCTTCCCC
*
236423 CCAATTTTTGTAGAGTCTAAATTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
258 CCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
*
236488 TGTTCATTTTGTGAGTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATT
323 TGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATT
*
236553 TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTCAAATA
388 TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATA
* *
236618 AGACAAGCTCGATTCTCATAATA
453 AGACAAGCTCGATTCTCGTAACA
* * *
236641 GTCTCCTTTGTTTTCAAGATTGGGAAGCAAAAGCATATTCCCTTCATTAGGATACCTGACATTGA
1 GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
* * *
236706 TGCTTTGGCGTCGCAAGAAAAGGTTTTCTTTCC-CTCATTTTTGATAGAATCAATGTTTGTCTCT
66 TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCAC-CGTTTTTGATAGAATCAAAGTTTGTCTCT
* * *
236770 TAAATAAAACAAACATGAGTAGTCATACTAAT-CCCATTCTTTTCTA-GATTAGGCACTATAAAC
130 TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAAC
* ** * ** * *
236833 ATAGCCTTTTCATAAGGATATTCGATATTGATGC-TT--TTTCCCAAGAAAGGCTTTCTTCTCTC
194 ATAGTCTTTTCATAAGGATACACGATATTAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCC
*
236895 CAATTTTTGTAGAGTCTAAATTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
259 CAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * *
236960 GTTCATTTTGTGATTAAACACTATAAACACTATCTCCTCATTAGGATAAATGATATTGATGATTT
324 GTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATTT
* * * * *
237025 TCTTTTGCATGGAAATCTTTTCTTTGCCCTTTTTTCCATAAAATCAAAATACATCCCTTCAATAA
389 TCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
* *
237090 GATAAGCATCGATTCTTGTAACA
454 GACAAGC-TCGATTCTCGTAACA
*
237113 GTCTCCATTT-TTTTCAAGATTGGGAACCAAGAA-CACATTCCCGTT-ATTAGGATACATGACAT
1 GTCTCC-TTTCTTTTCAAGATTGGGAAGCAA-AAGCACATTCCC-TTCATTAGGATACATGACAT
** * * * * *
237175 TGATGCTTTGGTGTCATAAAAAAAGCTTTTATTGT-CACCGTTTTTTATAAAATCAAAGTTTGTC
63 TGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTT-TCCACCGTTTTTGATAGAATCAAAGTTTGTC
* * * * * * * *
237239 TCTTAAATAAGATAAGCATGAAT--TCTTGCATTAACCCCCATTCTTTTTAGGATTAGGTAGCAT
127 TCTTAAATAAGACAAACATGAATAGTCAT--ACTAATCCCCATTCTTTTCAGGATTAGGCACCAT
* * * * * * * *
237302 AAACATAGTCTTTTCACAAGGATATAAGATATTAACGCTTTGATTTTGCAAAAAAGGCTTTCTTC
190 AAACATAGTCTTTTCATAAGGATACACGATATTAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTC
* * * * * * * *
237367 CCCCCAATTTCTGTAGAGCCTGAGTTCGTGCCTCAAGTGAAACAAACTTTGATTCTAGTAATGAT
255 CCCCCAATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
* * * * * *
237432 CTTTGTTCA-TTTGATGATTATACACTACAAACACTTTTTCCACATTAGGATAAATGATATTAAT
320 CTTTGTTCATTTTG-TGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGAT
237496 GA
384 GA
237498 CATTGATGCT
Statistics
Matches: 4794, Mismatches: 725, Indels: 227
0.83 0.13 0.04
Matches are distributed among these distances:
470 6 0.00
471 208 0.04
472 172 0.04
473 548 0.11
474 1052 0.22
475 523 0.11
476 1036 0.22
477 417 0.09
478 17 0.00
481 3 0.00
483 2 0.00
486 1 0.00
487 56 0.01
488 379 0.08
489 329 0.07
490 23 0.00
491 22 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (475 bp):
GTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAGGATACATGACATTGA
TGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
AGTCTTTTCATAAGGATACACGATATTAATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCCCCA
ATTTTTGTAGAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGT
TCATTTTGTGATTAGACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGATTTTC
TTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGA
CAAGCTCGATTCTCGTAACA
Found at i:235634 original size:13 final size:14
Alignment explanation
Indices: 235606--235640 Score: 54
Period size: 13 Copynumber: 2.6 Consensus size: 14
235596 CATGAAAATC
*
235606 TTTTCTTTGCCATA
1 TTTTCCTTGCCATA
235620 TTTTCCTTG-CATA
1 TTTTCCTTGCCATA
235633 TTTTCCTT
1 TTTTCCTT
235641 AAATTCAAAA
Statistics
Matches: 20, Mismatches: 1, Indels: 1
0.91 0.05 0.05
Matches are distributed among these distances:
13 12 0.60
14 8 0.40
ACGTcount: A:0.11, C:0.23, G:0.06, T:0.60
Consensus pattern (14 bp):
TTTTCCTTGCCATA
Found at i:237527 original size:20 final size:20
Alignment explanation
Indices: 237502--237549 Score: 87
Period size: 20 Copynumber: 2.4 Consensus size: 20
237492 TAATGACATT
*
237502 GATGCTTTGGCGTCGCAACA
1 GATGCTTTGGCATCGCAACA
237522 GATGCTTTGGCATCGCAACA
1 GATGCTTTGGCATCGCAACA
237542 GATGCTTT
1 GATGCTTT
237550 TATTTCCACC
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
20 27 1.00
ACGTcount: A:0.21, C:0.23, G:0.27, T:0.29
Consensus pattern (20 bp):
GATGCTTTGGCATCGCAACA
Found at i:238284 original size:818 final size:820
Alignment explanation
Indices: 236869--239145 Score: 2401
Period size: 818 Copynumber: 2.8 Consensus size: 820
236859 ATTGATGCTT
* * * * **
236869 TTTCCCAAGAAAGGCTTTCTTCTCTCCAATTTTTGTAGAGTCTAAATTCATGCCTCAAATGAGAC
1 TTTCACAAGAAAGGCTTTCATCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGAC
*
236934 AAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTAAACACTATAAACAC-TATCTCCT
66 AAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACAT-TCTCCT
* *
236998 CATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTTTTTTCCA
130 CATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCT
* * * * *
237063 TAAAATCAAAATACATCCCTTCAATAAGATAAGCATCGATTCTTGTAACAGTCTCCATTT-TTTT
195 TAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAATCTCC-TTTCTTTT
* *
237127 CAAGATTGGGAACCAAGAA-CACATTCCCGTTATTAGGATACATGACATTGATGCTTTGGTGTCA
259 CAAGATTGGGAAGCAA-AAGCACATTCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCA
* * * * * *
237191 TAAAAAAAGCTTTTATTGT-CACCGTTTTTTATAAAATCAAAGTTTGTCTCTTAAATAAGATAAG
323 CAAGAAAAGATTTTATT-TCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA
** * * * * * *
237255 CATGAATTCTTGCATTAACCCCCATTCTTTTTAGGATTAGGTAGCATAAACATAGTCTTTTCACA
387 CATGAATAGTTGTACTAATCCCCATTC-TTTTAGGATTAGGCA-CTTAAACATAGTCTTTTCATA
* * * * *
237320 AGGATATAAGATATTAACGCTTTGATTTTGCAAAAAAGGCTTTCTTCCCCCCAATTTCTGTAGAG
450 AGGATACAAGATATTGATGCTTTGGTTTTGCAGAAAA-GCTTTCTTCCCCCCAATTT-TGTAGAG
* * * * * * *
237385 CCTGAGTTCGTGCCTCAAGTGAAACAAACTTTGATTCTAGTAATGATCTTTGTTCA-TTTGATGA
513 TCTAATTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTG-TGA
* * *
237449 TTATACACTACAAACACTTTTTCCACATTAGGATAAATGATATTAATGA-CATT-G-AT-G-CTT
577 TTAGACACTATAAACACTTTTTCCTCATTAGGATAAATGATATTAATGATCATTAGCATAGACTT
* *** ** * * * * ** * *
237509 TGGCGTCGCAACAG-ATGCTTTGGCATCGCAA-CAGATGCTTTTATTTCCAC-CGTTTTGGA-T-
642 T-GCGTCG-AACAGTATGCCTTAAAATCAAAATCA-ATCCCTTAAATAACACGAGCTTT-GATTC
* * * *
237569 GGAATCAAAGTTTG-TCTCCTAAATAAGACAAACAACAATAGTAGT-AC-T-AATCCTTATTCCT
703 GGAA-CAAACTCTGTTCT-CTAAATAA-A-AAACAA-AAT--TAGTCACTTCAAT-ATCATTCCT
* * * * ** * *
237630 TTCAATATTA-G--CCTTATAAC-CAATCATTTCATAAGGAAACTCGATATTGACACTTTGT
760 TTCAAGATTAGGCACCATA-AACACAAACATTTCACAAGGAAACAAGATAATGACACTTTGG
** * ** *
237688 TTTTGCAAGAAAGGCTTTGATC-CCTTAATTTTTGTAGAGTCTAAGTTTGTACCTCAAATGAGAC
1 TTTCACAAGAAAGGCTTTCATCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGAC
** * * *
237752 AAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACGCATTCTCCTC
66 AAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACATTCTCCTC
*
237817 ATTAGGATAAATGATATTGATGATTTTTTTTTGCATGGAAAT-TTTTCCTTTGCCCTATTTTCCT
131 ATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTT-CTTTGCCCTATTTTCCT
* * * * *
237881 TAAAATCCAAATTCATCCCTTAAATAGGACAAGCATCGATTCCCATAACAATCTTCTTTCTTTTC
195 TAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAATCTCCTTTCTTTTC
* * *
237946 AAGATTGGGAAGCAAAAGCATATT-CCTTTCATTAAGATACATGACATTGATGCTTCGGTGTCAC
260 AAGATTGGGAAGCAAAAGCACATTCCCTTT-ATTAGGATACATGACATTGATGCTTTGGTGTCAC
* *
238010 AAGAAAAGGTTTTCTTTCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
324 AAGAAAAGATTTTATTTCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
* * * * * * *
238075 TGAGTAGTTGTACTCATCCCCATTCTTTTCAAGATTAGGCACCTTAAATATTGTCTTCTCATAGG
389 TGAATAGTTGTACTAATCCCCATTCTTTT-AGGATTAGGCA-CTTAAACATAGTCTTTTCATAAG
* * * * * *
238140 GATACAAGACATTGATACTTTGGTTTCGTAGGAAAAGCTTTCTTCCCCCCAAGTCTTGTGGAGTC
452 GATACAAGATATTGATGCTTTGGTTTTGCA-GAAAAGCTTTCTTCCCCCCAA-TTTTGTAGAGTC
* *
238205 TAATTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTCCATTTTGTGATTA
515 TAATTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTA
* *
238270 GACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCATTAGCATAGAAAT
580 GACACTATAAACACTTTTTCCTCATTAGGATAAATGATATTAATGA---TCATTAGCATAG--A-
* * * * * * * * *
238335 CTTTTCTTTGACCTGTTTTCCTTAAAATCAAAATTAATCCCTTAAATAAGACGAGCTTTGATTCT
639 CTTTGCGTCGAACAGTATGCCTTAAAATCAAAATCAATCCCTTAAATAACACGAGCTTTGA-T-T
* * * *** * * * ** **
238400 CGTAACAATCTCTGTTCTTTTCCTTAAAATCAAAATTAGTCCCTTCAATATCATTGTTTTCTGGA
702 CGGAACAAACTCTGTTCTCTAAATAAAAAACAAAATTAGTCACTTCAATATCATTCCTTTCAAGA
* * * ***
238465 TTAGGCACCATAAACATAAACGTTTCACAAGGATACAAGATAATGGTGCTTTGG
767 TTAGGCACCATAAACACAAACATTTCACAAGGAAACAAGATAATGACACTTTGG
*
238519 TTTCACAAGAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGAC
1 TTTCACAAGAAAGGCTTTCATCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGAC
* * * *
238584 AAACATGGATTCTAGTAAGGATCTTTGTTCATTTTGTGATTAGATACTATAAACACATTCTCTTT
66 AAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACATTCTCCTC
* * * * *
238649 AGTAGGATAAATGATATTGAT-AGTTTTCTTTTGCATGAAAATCTTGTCTTCGCTCTATTTTCCT
131 ATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCT
* *
238713 TAAAATCAAAATTCATCCCGTAAATAAGACAAGCAAT-GACTT-TCGTAATAATCTCCTTTCTTT
195 TAAAATCAAAATTCATCCCTTAAATAAGACAAGC-ATCGA-TTCTCGTAACAATCTCCTTTCTTT
* **
238776 TCAAGATTGGGAAGCAAATGCACATTCCCTTTATTAGGATGTATGACATT-AGTGCTTTGGTGTC
258 TCAAGATTGGGAAGCAAAAGCACATTCCCTTTATTAGGATACATGACATTGA-TGCTTTGGTGTC
*
238840 ACAAGGAAAGATTTTATTTCCACCG-TTTTTAGTAGAATCAAAGTTTGTCTCTTAAATAAGACAA
322 ACAAGAAAAGATTTTATTTCCACCGTTTTTTA-TAGAATCAAAGTTTGTCTCTTAAATAAGACAA
** * *
238904 ACATGAATAGTCATACTAATCCTCATTCTTTTAGGATTAGGCACTATAAACATAATCTTTTCATA
386 ACATGAATAGTTGTACTAATCCCCATTCTTTTAGGATTAGGCACT-TAAACATAGTCTTTTCATA
* *
238969 AGGATACAAGATACTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT-CCCCCAATTTTTGTAGAG
450 AGGATACAAGATATTGATGCTTTGGTTTTGC-AGAAAAGCTTTCTTCCCCCCAA-TTTTGTAGAG
* ** *
239033 TCTAAGTTT-GTGCCTCAAATAAGAC-AACATGGATTCTAGTAACAATCTTTGTTCATTTTTTGA
513 TCTAA-TTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGA
* *
239096 TTAGACACTATTAACACTTTCTT-CTCATTAGGATAAATGATATTATTGAT
577 TTAGACACTATAAACACTTT-TTCCTCATTAGGATAAATGATATTAATGAT
239146 TTTGTTTTGC
Statistics
Matches: 1205, Mismatches: 205, Indels: 89
0.80 0.14 0.06
Matches are distributed among these distances:
817 18 0.01
818 488 0.40
819 29 0.02
822 4 0.00
823 1 0.00
824 2 0.00
825 1 0.00
826 5 0.00
827 4 0.00
828 39 0.03
829 95 0.08
830 41 0.03
831 131 0.11
832 335 0.28
833 12 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (820 bp):
TTTCACAAGAAAGGCTTTCATCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGAC
AAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACATTCTCCTC
ATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTT
AAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAATCTCCTTTCTTTTCA
AGATTGGGAAGCAAAAGCACATTCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAA
GAAAAGATTTTATTTCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
AATAGTTGTACTAATCCCCATTCTTTTAGGATTAGGCACTTAAACATAGTCTTTTCATAAGGATA
CAAGATATTGATGCTTTGGTTTTGCAGAAAAGCTTTCTTCCCCCCAATTTTGTAGAGTCTAATTT
CGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACT
ATAAACACTTTTTCCTCATTAGGATAAATGATATTAATGATCATTAGCATAGACTTTGCGTCGAA
CAGTATGCCTTAAAATCAAAATCAATCCCTTAAATAACACGAGCTTTGATTCGGAACAAACTCTG
TTCTCTAAATAAAAAACAAAATTAGTCACTTCAATATCATTCCTTTCAAGATTAGGCACCATAAA
CACAAACATTTCACAAGGAAACAAGATAATGACACTTTGG
Found at i:238781 original size:832 final size:829
Alignment explanation
Indices: 237714--239250 Score: 2153
Period size: 832 Copynumber: 1.9 Consensus size: 829
237704 TTGATCCCTT
*
237714 AATTTTTGTAGAGTCTAAGTTTGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCA
1 AATTTTTGTAGAGTCTAAGTTTGTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * * *
237779 TTCATTTTGTGGTTAGGCACTATAAACGCATTCTCCTCATTAGGATAAATGATATTGATGATTTT
66 TTCATTTTGTGATTAGACACTATAAACACATTCTCCTCAGTAGGATAAATGATATTGATGATTTT
* * * * * * *
237844 TTTTTGCATGGAAATTTTTCCTTTGCCCTATTTTCCTTAAAATCCAAATTCATCCCTTAAATAGG
131 CTTTTGCATGAAAATTTGTCCTTCGCCCTATTTTCCTTAAAATCAAAATTCATCCCGTAAATAAG
* *
237909 ACAAGCATCGATTCCCATAACAATCTTCTTTCTTTTCAAGATTGGGAAGCAAAAGCATATT-CCT
196 ACAAGCATCGATTCCCATAACAATCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCT
* *
237973 TTCATTAAGATACATGACATT-GATGCTTCGGTGTCACAAGAAAAGGTTTTCTTTCCACCGTTTT
261 TT-ATTAAGATACATGACATTAG-TGCTTCGGTGTCACAAGAAAAGATTTTATTTCCACCG-TTT
* ** *
238037 TTA-TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGTAGTTGTACTCATCCCCATTCT
323 TTAGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
* ** * *
238101 TTTCAAGATTAGGCACCT-TAAATATTGTCTTCTCATAGGGATACAAGACATTGATACTTTGGTT
388 TTT-AAGATTAGGCA-CTATAAACATAATCTTCTCATAAGGATACAAGACACTGATACTTTGGTT
* * * * *
238165 TCGTAGGAAAAGCTTTCTTCCCCCCAAGTCTTGTGGAGTCTAA-TTTCGTGCCTTAAATGAGACA
451 TCGCAAGAAAAGCTTTCTT-CCCCCAAGTCTTGTAGAGTCTAAGTTT-GTGCCTCAAATAAGAC-
**
238229 AACATGGATTCTAGTAATGATCTTTGTCCATTTTGTGATTAGACACTATAAACACTTTCTCCTCA
513 AACATGGATTCTAGTAACAATCTTTGTCCATTTTGTGATTAGACACTATAAACACTTTCTCCTCA
* **
238294 TTAGGATAAATGATATTGA-TGATTTTCATTAGCATAGAAATCTTTTCTTTGACCTGTTTTCCTT
578 TTAGGATAAATGATATT-ATTGATTTTCATTAGCATAGAAATCTTTTCTTTCACCCATTTTCCTT
* * *
238358 AAAATCAAAATTAAT-CCCTTAAATAAGACGAGCTTTGATTCTCGTAACAATCT-CTGTTCTTTT
642 AAAATCAAAATTAATCCCCTTAAATAAGACAAGC-TCGATTCTCATAACAATCTCCT-TTCTTTT
238421 CCTTAAAATCAAAATTAGTCCCTTCAATATCATTGTTTTCTGGATTAGGCACCATAAACATAAAC
705 CCTTAAAATCAAAATTAGTCCCTTCAATATCATTGTTTTCTGGATTAGGCACCATAAACATAAAC
238486 GTTTCACAAGGATACAAGATAATGGTGCTTTGGTTTCACAAGAAAGGCTTTCTTCTCCCC
770 GTTTCACAAGGATACAAGATAATGGTGCTTTGGTTTCACAAGAAAGGCTTTCTTCTCCCC
* **
238546 AATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTTG
1 AATTTTTGTAGAGTCTAAGTTTGTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * *
238611 TTCATTTTGTGATTAGATACTATAAACACATTCTCTTTAGTAGGATAAATGATATTGAT-AGTTT
66 TTCATTTTGTGATTAGACACTATAAACACATTCTCCTCAGTAGGATAAATGATATTGATGA-TTT
*
238675 TCTTTTGCATGAAAATCTTGT-CTTCGCTCTATTTTCCTTAAAATCAAAATTCATCCCGTAAATA
130 TCTTTTGCATGAAAAT-TTGTCCTTCGCCCTATTTTCCTTAAAATCAAAATTCATCCCGTAAATA
* * * *
238739 AGACAAGCAAT-GACTT-TCGTAATAATCTCCTTTCTTTTCAAGATTGGGAAGCAAATGCACATT
194 AGACAAGC-ATCGA-TTCCCATAACAATCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATT
* ** * *
238802 CCCTTTATTAGGATGTATGACATTAGTGCTTTGGTGTCACAAGGAAAGATTTTATTTCCACCGTT
257 CCCTTTATTAAGATACATGACATTAGTGCTTCGGTGTCACAAGAAAAGATTTTATTTCCACCGTT
*
238867 TTTAGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCTCATTC
322 TTTAGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTC
* * * *
238932 TTTTAGGATTAGGCACTATAAACATAATCTTTTCATAAGGATACAAGATACTGATGCTTTGGTTT
387 TTTTAAGATTAGGCACTATAAACATAATCTTCTCATAAGGATACAAGACACTGATACTTTGGTTT
* * * *
238997 TGCAAGAAAGGCTTTCTTCCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGACAACA
452 CGCAAGAAAAGCTTTCTTCCCCCAAGTCTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGACAACA
* * * *
239062 TGGATTCTAGTAACAATCTTTGTTCATTTTTTGATTAGACACTATTAACACTTTCTTCTCATTAG
517 TGGATTCTAGTAACAATCTTTGTCCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAG
** * * * * * **
239127 GATAAATGATATTATTGATTTTGTTTTGCATGGTAATCTTTTCTTTCCCCCATTTTTCTTAATTT
582 GATAAATGATATTATTGATTTTCATTAGCATAGAAATCTTTTCTTTCACCCATTTTCCTTAAAAT
* *
239192 CAAAATTCATCCCCTTAAATAAGACAAGCTCGATTCTCATTACAATCTCCTTTCTTTTC
647 CAAAATTAATCCCCTTAAATAAGACAAGCTCGATTCTCATAACAATCTCCTTTCTTTTC
239251 AAGATTGGGA
Statistics
Matches: 615, Mismatches: 78, Indels: 27
0.85 0.11 0.04
Matches are distributed among these distances:
828 1 0.00
829 147 0.24
830 55 0.09
831 73 0.12
832 326 0.53
833 13 0.02
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.38
Consensus pattern (829 bp):
AATTTTTGTAGAGTCTAAGTTTGTACCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
TTCATTTTGTGATTAGACACTATAAACACATTCTCCTCAGTAGGATAAATGATATTGATGATTTT
CTTTTGCATGAAAATTTGTCCTTCGCCCTATTTTCCTTAAAATCAAAATTCATCCCGTAAATAAG
ACAAGCATCGATTCCCATAACAATCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCT
TTATTAAGATACATGACATTAGTGCTTCGGTGTCACAAGAAAAGATTTTATTTCCACCGTTTTTA
GTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
AAGATTAGGCACTATAAACATAATCTTCTCATAAGGATACAAGACACTGATACTTTGGTTTCGCA
AGAAAAGCTTTCTTCCCCCAAGTCTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGACAACATGGA
TTCTAGTAACAATCTTTGTCCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATA
AATGATATTATTGATTTTCATTAGCATAGAAATCTTTTCTTTCACCCATTTTCCTTAAAATCAAA
ATTAATCCCCTTAAATAAGACAAGCTCGATTCTCATAACAATCTCCTTTCTTTTCCTTAAAATCA
AAATTAGTCCCTTCAATATCATTGTTTTCTGGATTAGGCACCATAAACATAAACGTTTCACAAGG
ATACAAGATAATGGTGCTTTGGTTTCACAAGAAAGGCTTTCTTCTCCCC
Found at i:239350 original size:473 final size:474
Alignment explanation
Indices: 238462--240062 Score: 1836
Period size: 473 Copynumber: 3.4 Consensus size: 474
238452 ATTGTTTTCT
* * * * *
238462 GGATTAGGCACCATAAACATAAACGTTTCACAAGGATACAAGATAATGGTGCTTTGGTTTCACAA
1 GGATTAGGCACCATAAACATAATCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCGCAA
*
238527 GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGG
66 GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGACAAACATGG
* * * * *
238592 ATTCTAGTAAGGATCTTTGTTCATTTTGTGATTAGATACTATAAACACATTCTCTT-T-AGTAGG
131 ATTCTAGTAACGATCTTTGTTCATTTTATGATTAGACACTATTAACAC-TT-TCTTCTCATTAGG
* * * * *
238655 ATAAATGATATTGATAG-TTTTCTTTTGCATGAAAATCTTGTCTTCGCTCTATTTTCCTTAAAAT
194 ATAAATGATATTGATTGATTTTCTTTTGCATGAAAATCTTTTCTTC-CCCCATTTTTCTTAAAAT
*
238719 CAAAATTCATCCCGTAAATAAGACAAGCAAT-GACTT-TCGTAATAATCTCCTTTCTTTTCAAGA
258 CAAAATTCATCCCTTAAATAAGACAAGC-ATCGA-TTCTCGTAATAATCTCCTTTCTTTTCAAGA
* * * *
238782 TTGGGAAGCAAATGCACATTCCCTTTATTAGGATGTATGACATTAGTGCTTTGGTGTCACAAG-G
321 TTGGGAAGGAAATGCACATTCCCTTT-TTAGGATATATGACATTGGTGCTTTGGTGTCATAAGAG
* * * * *
238846 AAAGATTTTATTTCCACCGTTTTTAGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
385 -AAGCTTTTATTTTCACCTTTTTTGGTAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAA
* *
238911 TAGTCATACTAATCCTCATTCTTTTA
449 TAGTCATACCAATCCCCATTCTTTTA
* * *
238937 GGATTAGGCACTATAAACATAATCTTTTCATAAGGATACAAGATACTGATGCTTTGGTTTTGCAA
1 GGATTAGGCACCATAAACATAATCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCGCAA
239002 GAAAGGCTTTCTTC-CCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGAC-AACATGG
66 GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGACAAACATGG
* *
239065 ATTCTAGTAACAATCTTTGTTCATTTTTTGATTAGACACTATTAACACTTTCTTCTCATTAGGAT
131 ATTCTAGTAACGATCTTTGTTCATTTTATGATTAGACACTATTAACACTTTCTTCTCATTAGGAT
* ** **
239130 AAATGATATT-ATTGATTTTGTTTTGCATGGTAATCTTTTCTTTCCCCCATTTTTCTTAATTTCA
196 AAATGATATTGATTGATTTTCTTTTGCATGAAAATCTTTTC-TTCCCCCATTTTTCTTAAAATCA
* * *
239194 AAATTCATCCCCTTAAATAAGACAAGC-TCGATTCTCATTACAATCTCCTTTCTTTTCAAGATTG
260 AAATTCAT-CCCTTAAATAAGACAAGCATCGATTCTCGTAATAATCTCCTTTCTTTTCAAGATTG
* * * * * *
239258 GGAAGGAAAGGCACTTTTCCTTCTTTAGGATATATGAAATTGGTCCTTTGGTGTCGTAAGAGAAG
324 GGAAGGAAATGCACATTCCCTT-TTTAGGATATATGACATTGGTGCTTTGGTGTCATAAGAGAAG
* * * *
239323 CTTTTATTTTCACTTTTTTTGGTAGAATCAAAGTTTGCCTCTTAAATAGGACAAACCTAAATAGT
388 CTTTTATTTTCACCTTTTTTGGTAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATAGT
239388 CATACCAATCCCCATTCTTTTCA
453 CATACCAATCCCCATTCTTTT-A
* * * *
239411 GGTTTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATAATCACGCTTTGGTTTCGCAA
1 GGATTAGGCACCATAAACATAATCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCGCAA
** ** * **
239476 GAAAGG-TTTACTTCTCCTAAATTTTAATAGAGTCTAAGTTCGTGCCTCAAATGTGACAAACATG
66 GAAAGGCTTT-CTTCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGACAAACATG
* * ** * * *
239540 GCTTC-CGATAGTGATCTTTGTTCATTTTATGATTAGACACTA-TAAAATCTTTCTCCTCATTGG
130 GATTCTAG-TAACGATCTTTGTTCATTTTATGATTAGACACTATTAACA-CTTTCTTCTCATTAG
* * * *
239603 GATAAATGATATTGA-TGATTTTCTTTTGCATGCAAATATTTTCTTCGCCC-TATTTTCTTTAAC
193 GATAAATGATATTGATTGATTTTCTTTTGCATGAAAATCTTTTCTTCCCCCAT-TTTTC-TTAAA
* * * * * ** *
239666 ATCAAAATTCGTCCATTTAATAAGATAAGCATCAATTCTCGTAATTGTCTCCATTCTTTTCAAGA
256 ATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAATAATCTCCTTTCTTTTCAAGA
* * *
239731 TT--G--GG--ATG--CGTTCCCATTTTTAGGATATATGACATTGATGTTTTGGTGTCATAAGA-
321 TTGGGAAGGAAATGCACATTCCC-TTTTTAGGATATATGACATTGGTGCTTTGGTGTCATAAGAG
* * *
239787 ACTGCTTTTATTTTCACCTTTTTTGATAGAATCAAAGTTTGTCTCCTAAATAGGACAGAA-ATGA
385 A-AGCTTTTATTTTCACCTTTTTTGGTAGAATCAAAGTTTGTCTCTTAAATAGGACA-AACATGA
*
239851 ATAGTCATGCCAATCCCCATTCTTTTTA
448 ATAGTCATACCAATCCCCATTC-TTTTA
* * ** ** *
239879 GGATTAGGCACCGTAAACATAGTCTTTTCATAAGGATACTCGATTTTTATGCTTTGGTTTCGCAA
1 GGATTAGGCACCATAAACATAATCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCGCAA
* * *
239944 GAAA-GCCTT-TTCTCCCTCCAATTTTTGTAGAGTCTAAGATCT-TACCTCAAATAAGACAAACA
66 GAAAGGCTTTCTTCT-CC-CCAATTTTTGTAGAGTCTAAG-TTTGTGCCTCAAATAAGACAAACA
* ** ** * * * *
240006 TGGATTCTAGTAATGATCTTCATTCATTTTGCGGTTAGGCACTATAAATACTTTCTT
128 TGGATTCTAGTAACGATCTTTGTTCATTTTATGATTAGACACTATTAACACTTTCTT
240063 TCCCCCATTT
Statistics
Matches: 960, Mismatches: 137, Indels: 65
0.83 0.12 0.06
Matches are distributed among these distances:
466 4 0.00
467 4 0.00
468 248 0.26
469 13 0.01
470 2 0.00
471 4 0.00
472 11 0.01
473 269 0.28
474 134 0.14
475 137 0.14
476 133 0.14
477 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.38
Consensus pattern (474 bp):
GGATTAGGCACCATAAACATAATCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCGCAA
GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGACAAACATGG
ATTCTAGTAACGATCTTTGTTCATTTTATGATTAGACACTATTAACACTTTCTTCTCATTAGGAT
AAATGATATTGATTGATTTTCTTTTGCATGAAAATCTTTTCTTCCCCCATTTTTCTTAAAATCAA
AATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAATAATCTCCTTTCTTTTCAAGATTGGG
AAGGAAATGCACATTCCCTTTTTAGGATATATGACATTGGTGCTTTGGTGTCATAAGAGAAGCTT
TTATTTTCACCTTTTTTGGTAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATAGTCAT
ACCAATCCCCATTCTTTTA
Found at i:240025 original size:468 final size:468
Alignment explanation
Indices: 238462--240061 Score: 1802
Period size: 468 Copynumber: 3.4 Consensus size: 468
238452 ATTGTTTTCT
** * * ** *
238462 GGATTAGGCACCATAAACATAAACGTTTCACAAGGATACAAGATAATGGTGCTTTGGTTTCACAA
1 GGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATAATCATGCTTTGGTTTCGCAA
* *
238527 GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGG
66 GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTCTGTGCCTCAAATAAGACAAACATGG
* * * * * *
238592 ATTCTAGTAAGGATCTTTGTTCATTTTGTGATTAGATACTATAAACACATTCTCTTTAGTAGGAT
131 ATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAA-ACTTTCTCCTCATTAGGAT
* * *
238657 AAATGATATTGAT-AGTTTTCTTTTGCATGAAAATCTTGTCTTCGCTCTATTTTCCTTAAAATCA
195 AAATGATATTGATGA-TTTTCTTTTGCATGAAAATCTTTTCTTCGCCCTATTTTCTTTAAAATCA
* * *
238721 AAATTCATCCCGTAAATAAGACAAGCAATGACTT-TCGTAATAATCTCCTTTCTTTTCAAGATTG
259 AAATTCATCCCTTAAATAAGACAAGC-ATCAATTCTCGTAATAATCTCCTTTCTTTTCAAGATTG
* *
238785 GGAAGCAAATGCACATTCCCTTTATTAGGATGTATGACATT-AGTGCTTTGGTGTCACAAGGAAA
323 GG--G--AATG-ACATTCCCTTT-TTAGGATATATGACATTGA-TGCTTTGGTGTCATAA-GAAA
* * * *
238849 GATTTTATTTCCACCGTTTTT-AGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
380 GCTTTTATTTTCACCTTTTTTGA-TAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATA
* *
238913 GTCATACTAATCCTCATTC-TTTTA
444 GTCATACCAATCCCCATTCTTTTTA
* * * * *
238937 GGATTAGGCACTATAAACATAATCTTTTCATAAGGATACAAGATACTGATGCTTTGGTTTTGCAA
1 GGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATAATCATGCTTTGGTTTCGCAA
*
239002 GAAAGGCTTTCTTC-CCCCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAATAAGAC-AACATGG
66 GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTCTGTGCCTCAAATAAGACAAACATGG
** * * *
239065 ATTCTAGTAACAATCTTTGTTCATTTTTTGATTAGACACTATTAACACTTTCTTCTCATTAGGAT
131 ATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTA-TAAAACTTTCTCCTCATTAGGAT
* ** * **
239130 AAATGATATT-ATTGATTTTGTTTTGCATGGTAATCTTTTCTTTC-CCCCATTTT-TCTTAATTT
195 AAATGATATTGA-TGATTTTCTTTTGCATGAAAATCTTTTC-TTCGCCCTATTTTCT-TTAAAAT
* * * *
239192 CAAAATTCATCCCCTTAAATAAGACAAGC-TCGATTCTCATTACAATCTCCTTTCTTTTCAAGAT
257 CAAAATTCAT-CCCTTAAATAAGACAAGCATCAATTCTCGTAATAATCTCCTTTCTTTTCAAGAT
* * * * * * *
239256 TGGGAAGGAAAGGCACTTTTCCTTCTTTAGGATATATGAAATTGGTCCTTTGGTGTCGTAAGAGA
321 T-GG--GG-AATG-ACATTCCCTT-TTTAGGATATATGACATTGATGCTTTGGTGTCATAAGA-A
* * * * *
239321 AGCTTTTATTTTCACTTTTTTTGGTAGAATCAAAGTTTGCCTCTTAAATAGGACAAACCTAAATA
379 AGCTTTTATTTTCACCTTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATA
*
239386 GTCATACCAATCCCCATTCTTTTCA
444 GTCATACCAATCCCCATTCTTTTTA
* *
239411 GGTTTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATAATCACGCTTTGGTTTCGCAA
1 GGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATAATCATGCTTTGGTTTCGCAA
** ** **
239476 GAAAGG-TTTACTTCTCCTAAATTTTAATAGAGTCTAAGT-TCGTGCCTCAAATGTGACAAACAT
66 GAAAGGCTTT-CTTCTCCCCAATTTTTGTAGAGTCTAAGTCT-GTGCCTCAAATAAGACAAACAT
* * * * *
239539 GGCTTC-CGATAGTGATCTTTGTTCATTTTATGATTAGACACTATAAAATCTTTCTCCTCATTGG
129 GGATTCTAG-TAATGATCTTTGTTCATTTTGTGATTAGACACTATAAAA-CTTTCTCCTCATTAG
* * *
239603 GATAAATGATATTGATGATTTTCTTTTGCATGCAAATATTTTCTTCGCCCTATTTTCTTTAACAT
192 GATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTCGCCCTATTTTCTTTAAAAT
* * * * ** *
239668 CAAAATTCGTCCATTTAATAAGATAAGCATCAATTCTCGTAATTGTCTCCATTCTTTTCAAGATT
257 CAAAATTCATCCCTTAAATAAGACAAGCATCAATTCTCGTAATAATCTCCTTTCTTTTCAAGATT
* * *
239733 -GGG-ATG-CGTTCCCATTTTTAGGATATATGACATTGATGTTTTGGTGTCATAAGAACTGCTTT
322 GGGGAATGACATTCCC-TTTTTAGGATATATGACATTGATGCTTTGGTGTCATAAGAA-AGCTTT
*
239795 TATTTTCACCTTTTTTGATAGAATCAAAGTTTGTCTCCTAAATAGGACAGAA-ATGAATAGTCAT
385 TATTTTCACCTTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAGGACA-AACATGAATAGTCAT
*
239859 GCCAATCCCCATTCTTTTTA
449 ACCAATCCCCATTCTTTTTA
* ** ** *
239879 GGATTAGGCACCGTAAACATAGTCTTTTCATAAGGATACTCGATTTTTATGCTTTGGTTTCGCAA
1 GGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATAATCATGCTTTGGTTTCGCAA
* *
239944 GAAA-GCCTT-TTCTCCCTCCAATTTTTGTAGAGTCTAAGATCT-TACCTCAAATAAGACAAACA
66 GAAAGGCTTTCTTCT-CC-CCAATTTTTGTAGAGTCTAAG-TCTGTGCCTCAAATAAGACAAACA
** * * *
240006 TGGATTCTAGTAATGATCTTCATTCATTTTGCGGTTAGGCACTATAAATACTTTCT
128 TGGATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAA-ACTTTCT
240062 TTCCCCCATT
Statistics
Matches: 952, Mismatches: 138, Indels: 77
0.82 0.12 0.07
Matches are distributed among these distances:
466 4 0.00
467 4 0.00
468 256 0.27
469 7 0.01
470 3 0.00
472 8 0.01
473 255 0.27
474 143 0.15
475 128 0.13
476 142 0.15
477 2 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.38
Consensus pattern (468 bp):
GGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATAATCATGCTTTGGTTTCGCAA
GAAAGGCTTTCTTCTCCCCAATTTTTGTAGAGTCTAAGTCTGTGCCTCAAATAAGACAAACATGG
ATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAAACTTTCTCCTCATTAGGATA
AATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCTTCGCCCTATTTTCTTTAAAATCAAA
ATTCATCCCTTAAATAAGACAAGCATCAATTCTCGTAATAATCTCCTTTCTTTTCAAGATTGGGG
AATGACATTCCCTTTTTAGGATATATGACATTGATGCTTTGGTGTCATAAGAAAGCTTTTATTTT
CACCTTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATAGTCATACCAATC
CCCATTCTTTTTA
Found at i:240276 original size:264 final size:264
Alignment explanation
Indices: 239806--240317 Score: 707
Period size: 264 Copynumber: 1.9 Consensus size: 264
239796 ATTTTCACCT
* * *
239806 TTTTTGATAGAATCAAAGTTTGTCTCCTAAATAGGACAGAAATGAATAGTCATGCCAATCCCCAT
1 TTTTTGATAGAATCAAAGTTTGTCTCCTAAATAAGACAGAAAAGAATAGTCATACCAATCCCCAT
* * * *
239871 TCTTTTTAGGATTAGGCACCGTAAACATAGTCTTTTCATAAGGATACTCGATTTTTATGCTTTGG
66 TCTTTTCAAGATTAGGCACCGTAAACATAGTCTTTTCATAAGGATACTCGATATTGATGCTTTGG
*
239936 TTTCGCAAGAAAGCCTTTTCTCCCTCCAATTTTTGTAGAGTCTAAGATCTTACCTCAAATAAGAC
131 TTTCGCAAAAAAGCCTTTTCTCCCTCCAATTTTTGTAGAGTCTAAGATCTTACCTCAAATAAGAC
* *
240001 AAACATGGATTCTAGTAATGATCTTCATTCATTTTGCGGTTAGGCACTATAAATACTTTCTTTCC
196 AAACATGGATTCTAGTAATGATCTTCATTCATTTTGCGATTAGACACTATAAATACTTTCTTTCC
240066 CCCA
261 CCCA
* * ** * *
240070 TTTTTGATAGAATTAAAGTTTGTCT-CTAAAATAAGACA-AACAAGAGTAGTCATATTAATCTCT
1 TTTTTGATAGAATCAAAGTTTGTCTCCT-AAATAAGACAGAA-AAGAATAGTCATACCAATCCCC
240133 ATTCTTTTCAAGATTAGGCA-C-TACAGACATAGTCTTTTCATAAGGATACTCGATATTGATGCT
64 ATTCTTTTCAAGATTAGGCACCGTA-A-ACATAGTCTTTTCATAAGGATACTCGATATTGATGCT
*
240196 TTGGTTTCGCAAAAAAGGC-TTTCTTCCC-CCTAATTTTTGTAGAGTCTAAG-T-TTGAGCCTCA
127 TTGGTTTCGCAAAAAAGCCTTTTC-TCCCTCC-AATTTTTGTAGAGTCTAAGATCTT-A-CCTCA
* ** *
240257 AATAAGACAAACATGGATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGACACTATAAA
188 AATAAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGCGATTAGACACTATAAA
240318 CATTTTCTCC
Statistics
Matches: 219, Mismatches: 21, Indels: 16
0.86 0.08 0.06
Matches are distributed among these distances:
262 4 0.02
263 14 0.06
264 201 0.92
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (264 bp):
TTTTTGATAGAATCAAAGTTTGTCTCCTAAATAAGACAGAAAAGAATAGTCATACCAATCCCCAT
TCTTTTCAAGATTAGGCACCGTAAACATAGTCTTTTCATAAGGATACTCGATATTGATGCTTTGG
TTTCGCAAAAAAGCCTTTTCTCCCTCCAATTTTTGTAGAGTCTAAGATCTTACCTCAAATAAGAC
AAACATGGATTCTAGTAATGATCTTCATTCATTTTGCGATTAGACACTATAAATACTTTCTTTCC
CCCA
Found at i:241101 original size:475 final size:475
Alignment explanation
Indices: 240061--241269 Score: 1574
Period size: 475 Copynumber: 2.5 Consensus size: 475
240051 AAATACTTTC
* * * * * * **
240061 TTTCCCCCATTTTTGATAGAATTAAAGTTTGTCTCTAAAATAAGACAAACAAGAGTAGTCATATT
1 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA-TCTTGCT
* * * * * **
240126 AATCTCTATTCTTTTCAAGATTAGGCACTACAGACATAGTCTTTTCATAAGGATACTCGATATTG
65 AATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTG
*** *
240191 ATGCTTTGGTTTCGCAAAAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTTGAGCCTC
130 GCCCTTTGGTTTCGCAAAAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTTGTGCCTC
* * *
240256 AAATAAGACAAACATGGATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGACACTATAAACAT
195 AAATGAGACAAACATAGATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGACACTATAAACAA
* * **
240321 TTTCTCCTCATTAGAATAAATCATATTGATGATTTTCTTTTGTGTGGAAATCTTTTCTTTGCCCT
260 TGTCTCCTCATTAGAATAAATCATATTGATAATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * * * *
240386 ATTTTTCATAAAATCAAAATTCATCGCTTCAATAAGACAAGCAATGATTTTCGTAACACTGACCA
325 ATTTTCCATAAAATCAAAATTCATCCCTTAAATAAAACAAGCAATGATTCTCGTAACACTCACCA
* * *
240451 TTCTTTTCAAGATTGAGAACCAAGAACACATTCTCGTTATTAGGATACATGATATTGATGCTTTG
390 CTCTTTTCAAGATTGAGAACCAAGAACACATTCCCGTTATTAGGATACATGACATTGATGCTTTG
* *
240516 GTGTCGTAAGAAAGGCTTTTG
455 GTGTCGTAAGAAAAGCTTTTA
** * * *
240537 TTTTTACCTTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT-TGTAGCAC
1 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATATCTTG--C
* * *
240601 TAA-CCCCTATTCTTTTCAGGATTAGGGACCATAAACATTA-TCTTTTCACAAGGATACAAGATA
64 TAATCCCC-ATTCTTTTCAAGATTAGGCACCATAAACA-TAGTCTTTTCATAAGGATACAAGATA
* *
240664 TTGGCCCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTTGTGC
127 TTGGCCCTTTGGTTTCGCAAAAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTTGTGC
*
240729 CTCAAATGAGACAAACATAGATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGGCACTATAAA
192 CTCAAATGAGACAAACATAGATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGACACTATAAA
* * *
240794 CAATGTCGT-CTCATTA-AGATAAATGATGTTGATAATTTT-TTTTGCATGGAAGTCTTTTCTTT
257 CAATGTC-TCCTCATTAGA-ATAAATCATATTGATAATTTTCTTTTGCATGGAAATCTTTTCTTT
* *
240856 GCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAAACAAGC-ATCGATTCTCGTAACAG
320 GCCCTATTTTCCATAAAATCAAAATTCATCCCTTAAATAAAACAAGCAAT-GATTCTCGTAACAC
* * *
240920 TCTCCACTCTTTTCAAGATTGGGAACTAAGAACACATTCCCGTTATTAGGATACATGACATTGAT
384 TCACCACTCTTTTCAAGATTGAGAACCAAGAACACATTCCCGTTATTAGGATACATGACATTGAT
*
240985 GCTTTAGG-GTTGTAAGAAAAGCTTTTA
449 GCTTT-GGTGTCGTAAGAAAAGCTTTTA
* *
241012 TTTCCACCATTTTTGATAGAGTCAAAGTTTGTCTCTTAAATAAGACAAACGTGAATAATCTTGCT
1 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT-ATCTTGCT
* * * * * *
241077 AATCCCCATTCTTTTTATGATTAGGCCCCATAAAGATAGTCTTTTCATAACGATACAAGATAAT-
65 AATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTG
* * * *
241141 GCCGCTTTGGGTTCGCAAAAAAGGCTTTCTTCCCCCCAATTTTTGTAAAGTCTAAGTTCGTGCCT
130 GCC-CTTTGGTTTCGCAAAAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTTGTGCCT
* * * * *
241206 CAAATGAGACAAACA-AGGATTCTAGTAATGGTCTTCGTTCATTTTGTGATTAAACACTACAAAC
194 CAAATGAGACAAACATA-GATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGACACTATAAAC
241270 CCTTTCTTTT
Statistics
Matches: 635, Mismatches: 84, Indels: 29
0.85 0.11 0.04
Matches are distributed among these distances:
474 9 0.01
475 368 0.58
476 252 0.40
477 6 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATATCTTGCTA
ATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGG
CCCTTTGGTTTCGCAAAAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTTGTGCCTCA
AATGAGACAAACATAGATTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGACACTATAAACAAT
GTCTCCTCATTAGAATAAATCATATTGATAATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
TTTTCCATAAAATCAAAATTCATCCCTTAAATAAAACAAGCAATGATTCTCGTAACACTCACCAC
TCTTTTCAAGATTGAGAACCAAGAACACATTCCCGTTATTAGGATACATGACATTGATGCTTTGG
TGTCGTAAGAAAAGCTTTTA
Found at i:241672 original size:443 final size:442
Alignment explanation
Indices: 240828--249069 Score: 3471
Period size: 476 Copynumber: 17.7 Consensus size: 442
240818 GATGTTGATA
* *
240828 ATTTTTTTTGCATGGAAGTCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA
1 ATTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA
* * * *
240893 TAAAACAAGCATCGATTCTCGTAACAGTCTCCACTCTTTTCAAGATTGGGAACTAAGAACACATT
66 TAAGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACAAAGAACACATT
* * *
240958 CCCGTTATTAGGATACATGACATTGATGCTTTAGG-GTTGTAAGAAAAGCTTTTATTTCCACCAT
131 CCCGTTATTAGGATACATGACATTGATGCTTT-GGTGTCGCAAGAAAAGCTTTTATTTTCACCAT
* * * * *
241022 TTTTGATAGAGTCAAAGTTTGTCTCTTAAATAAGACAAACGTGAATAATCTTGCTAATCCCCATT
195 TTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
* * * * * * * *
241087 CTTTTTATGATTAGGCCCCATAAAGATAGTCTTTTCATAACGATACAAGATAATGCCGCTTTGGG
260 CTTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGACGCTTTGGT
* * * * *
241152 TTCGCAAAAAAGGCTTTCTTCCCCCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACA
325 TTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACA
* *
241217 AACAAGGATTCTAGTAATGGTCTTCGTTCATTTTGTGATTAAACACTACAAACC
390 AACATGGATTCTAGTAATGATCTTCGTTCATTTTGTGATTAAACACTACAAA-C
* * ** * *
241271 CTTTCTTTTGCTTGGAAATCTTTTCTTCCCCCTATTTTCCCTAAAATCAAAATTTATCCCTTAAA
1 ATTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA
* * ** * * * *
241336 TAAGATAAG-TTCGATTCTTATAACAG-CGTCTTTTTTTTTTCAAGATTGGGAAGCGAAG-GCAC
66 TAAGACAAGCATCGATTCTCGTAACAGTC-TC-TATTCTTTTCAAGATTGGGAA-CAAAGAACAC
* * * * * *
241398 ATTCGC-TTCATTCGGATGCATGACGTTGATGCTTTTGTGTCGCAAGAAAAGGTTTT-TTTTCCA
128 ATTCCCGTT-ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTT-CA
* * * * *
241461 CCGTTTTTGACAGTATCAAAGTTTGTCTCTCAAATAAGACAAATATGAATAGTCATACTAATCCC
191 CCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCC
* * *
241526 CATTCTTCTCAGGATTAGGCACCATAAACATACTCTTTTCATAAGGATACAAGATATTAACGCTT
256 CATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGACGCTT
* * *
241591 TGGTTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTATAGACTCTAACATCGTACCTCAAATGA
321 TGGTTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAAACTCTAAGATCGTACCTCAAATGA
* * * *
241656 GACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGGTTAAGCACTATAAAC
386 GACAAACATGGATTCTAGTAATGATCTTCGTTCATTTTGTGATTAAACACTACAAAC
*
241713 ATATTCTCCTCATTGCATGGAAATCTTTTTTTTGCCCTATTTTCCTTAAAAATCAAAATTCATCC
1 AT-TTCT--T--TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTT-AAAATCAAAATTCATCC
* * * *
241778 TTTATATAAGACAAGC-TCGATTCTTGTAACAGTCTCTTTTCTTTTCAAGATTGGGAAGCAAAG-
60 CTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAA-CAAAGA
* * ** * * * * *
241841 GCACTTTATCATCATTAGGATAAATGACATTGGTGCTTTGGTGTTGCAAGAAAAGCTTTTATTTT
124 ACACATTCCCGTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTT
* * * * *
241906 CACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAACAGTCATGCCAATC
189 CACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
** ** ** *
241971 CCCATTCTTTTTGGGATTAGGCACCATAAACACGGTCTTTTCATAAGGATACTCGATATTGATGC
254 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGACGC
* * * * *
242036 TTAGGTTTCGTAAGAAAGGCTTTTTTCCCCC-CATATTTTGT-AGCGTCTAAGATCGTACCTCAA
319 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCTAAT-TTTTGTAAAC-TCTAAGATCGTACCTCAA
* * * *
242099 ATGAGACAAACATAGATTCTACTAATGATCTTC-ATCAATTTGTGGTTAGGCACATAAACACATT
382 ATGAGACAAACATGGATTCTAGTAATGATCTTCGTTC-ATTT-T-G-T--G---ATTAA-ACA--
* *
242163 CTCCGCATTAGGTTAAATGATATTGATG
435 -----C-------T--A-CA-A---A-C
* * * *
242191 ATTTCTTTTTGCATGGAAA-CTTTTGTTTGCCCTATTTTCGTTAAAATCAAAATCCATCCCTTTA
1 ATTTC-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAA
* * * * * * * *
242255 ATAAGATAGGCAACGATTATCCTAACAGTCTCTATTCATTTCAAGATTAGGAACCAAGAACACAT
65 ATAAGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACAAAGAACACAT
* ** *
242320 TCCCGTTATTAGGATACAAGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTATTTTCACCGT
130 TCCCGTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTTCACCAT
* * *
242385 TTTTTATAGAATCAAAGTTTGCCTCTTAAATAAGACAAACAAGAATAGTCATACTAATCCCCATT
195 TTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
* * * * *
242450 TTTTTCTA-GATTAGACACCATAAACATAGTCTTTTTATAAGGATGCAAGATATTCACGCTTTGG
260 CTTTTC-AGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGACGCTTTGG
* * * * *
242514 TTTTGTAAGAAAGGCTTTCTT-CCCCTAAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
324 TTTCGCAAGAAAGGCTTTCTTCCCCCT-AATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGA
* * * * *
242578 CAAACATGGATTCAAGTAATGATCTTTGTTCATTTCGTGATTAGACACTGTAAAAAC
388 CAAACATGGATTCTAGTAATGATCTTCGTTCATTTTGTGATTAAACAC--TACAAAC
* * * * **
242635 TTTTTTCTCATTAAG-ATAAATGATATTGATGATTTTCTTTTGCATTGAAGTATTTTCTTTGCCC
1 --ATTTCT--TT-TGCAT---GGA-A---AT-CTTTTC-TTTGC-----CCTA------TT----
* * * *
242699 TATTTTCCTTAAAATCAAAATTTATCCAC-TCAATAAGATAAGCATCGATTTTCGTAATC-GTCT
37 T----TCCTTAAAATCAAAATTCATCC-CTTAAATAAGACAAGCATCGATTCTCGTAA-CAGTCT
* * * * **
242762 CCATTATTTTCAAGATTGGGAACCAAGAACACATTCTCGTT-TTGAGGATACATGACATTGATAT
96 CTATTCTTTTCAAGATTGGGAACAAAGAACACATTCCCGTTATT-AGGATACATGACATTGATGC
* * ** *
242826 TTTGGTGTTGCAACAATTGCTTTTATTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAA
160 TTTGGTGTCGCAAGAAAAGCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAA
* * *
242891 TCGAA-A-AAACATGAATAGTCATACCAATCCCAATTCTTTTTAGGATTAGGCACCATAAACATA
225 T--AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
* * * *
242954 GTCTTTTCATAAAGATACATGATATTGACGCTTTGGTTTCGCGAGAAAGGCTTTCTTCCCCCCAA
288 GTCTTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCTAA
* * * * * * *
243019 -TTTTGTAGAGTCTAGGATCTTACGTCAAATGAGACAAACATGGATTCTAGTAATGATCCTCATT
353 TTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCGTT
* * ** *
243083 CATTCTGTGGTTAGGCACTATAAAC
418 CATTTTGTGATTAAACACTACAAAC
* * ** * ** ** * * * *
243108 ATTTTCTTCT-CATTAGGATAA-ATGAT-ATTGATC-ATTTTGTTTGATATGAAAATATTTTCTT
1 A-TTTCTTTTGCA-T-GGA-AATCTTTTCTTTGCCCTATTTTCCTTAAAAT-CAAA-A--TTC-A
*** * * * * * * *
243169 TGCCCTATTTTCCTTAAAATCAAAATTCATCCACTCAATAAGATAAGCATCGATTTTCGTAATCG
57 T-CCC----TTAAATAAGA-C--AA-GCATCGATTC--T-CG-TAA-CA--G--TCTC-TATTC-
* ** *** * * ** *
243234 TTTCCATTATTTTCAAGATTGGGAACCAAGAGCACATTCTTGTTATGAGGATACATGACATTGAT
102 TTTTCAAGATTGGGAACA-----AAG--A-A-CACATTCCCGTTATTAGGATACATGACATTGAT
** ** * * *
243299 ATTTTGGTGTCGCAAGAATTGCTTTTATTTCCACCGTTTTGGATAGAATCAAAGTTTGTCTCTTA
158 GCTTTGGTGTCGCAAGAAAAGCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCTTA
* * * * *
243364 AACT-GGACAAACATGAATACTTATTAC-AATCCCAATTCTTTTTAGGATTAGGCACCATAAACA
223 AA-TAAGACAAACATGAATAGTCA-TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
** *
243427 TAGTCTTTTCATAAAGG-TACTTGATATTGACGCTTTGGTTTCGCGAGAAAGGCTTTCTTCCCCC
286 TAGTCTTTTCAT-AAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * *
243491 TAATTTTTGTAGAGTCTAAGATCTTACCTCAAATGAGAAAAACATGGATTCTAGTAATGATCCTC
350 TAATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTC
* * * ** *
243556 ATTCATTCTGTGCTTAGGCACTATAAAC
415 GTTCATTTTGTGATTAAACACTACAAAC
* ***
243584 ATTTTCTTTT-CATTAGGATAAATGATATTGATGATTTTCTTTTACATGGAAATATTTTATTTGC
1 A-TTTCTTTTGCA-T--G------GA-A---AT-CTTTTC--TT---T-GCCCTA---T-TTT--
* * * * * *
243648 CCTATTTTACTTAAAATCAAAATTCACCCCTTAAATATGACACGCATCAATTCTCATAACAATCT
39 -C-------CTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCT
* * * * * *
243713 CCTTTTCTTTTCAAGATTGGGAAGCAAA-AGCACATTCCCTTTATTAGGATACCTAATATTGATG
96 -CTATTCTTTTCAAGATTGGGAA-CAAAGAACACATTCCCGTTATTAGGATACATGACATTGATG
* * * * *
243777 CTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTTACAGAATCAAAGTTTGTCTCTTAA
159 CTTTGGTGTCGCAAGAAAAGCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAA
* ** * * *
243842 ATAAGACAAACATGAATTGTCGCACTAA-CCCCATTCTTTTCAGGATTAGGTACTATAAACATTG
224 ATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
* * * * *
243906 TCATTTCACAAGGATACAAGATATT--CGCCTTTTGGTTTTGCAAAAAAGGTTTTCTTCCCCCTA
289 TCTTTTCATAAGGATACAAGATATTGACG-C-TTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCTA
* * * ** * *
243969 ATTTTTGTAGAGTCTAAGTTCACACCTCAAATGAGACAAACATGGATTCTAGTAATGATATTTGT
352 ATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCGT
* * *
244034 CCATTTTGTGATTAGACACTATAAAC
417 TCATTTTGTGATTAAACACTACAAAC
* * * *
244060 ACTTTCTTCTCATTAGGATAAATGATAATGATGATTTTCTTT-CACATTGAATTATTTTCTTTGC
1 A-TTTC-T-T--TT--G---CATG-GAA--AT-CTTTTCTTTGC-C------CTA---T-TTT--
* * * * *
244124 CCTATTTTCCCTAAAATCAAAATTCATCCAC-TCAATAAGACAAGCTTTGATTTTTGTAATC-GT
39 CC-----T---TAAAATCAAAATTCATCC-CTTAAATAAGACAAGCATCGATTCTCGTAA-CAGT
* * * * * * *
244187 CACCATTATTTTCAAGATTGGGAACAAAGAACACATTCTCATTATTAGCATACATGACATTAATG
94 CTCTATTCTTTTCAAGATTGGGAACAAAGAACACATTCCCGTTATTAGGATACATGACATTGATG
* * ** * * *
244252 TTTTGGTGTCGCAATAATTGCTTTTATTTTCGCCGTTTTTGATAGAATCAATGTTTGTCTCTTAA
159 CTTTGGTGTCGCAAGAAAAGCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAA
** * * *
244317 ATTGGACAAACATGAATAGTCATA-TCAGTCCCAATTCTTTTTAGGATTAGGCACCATAAACATA
224 ATAAGACAAACATGAATAGTCATACT-AATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
* * ** * *
244381 ATCTTTTCATAAAGATACTCGATATTGACGCTTTGGTTTTGCAAGAAAGGCTTTATT-CCCCTCA
288 GTCTTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCT-A
* * * * * * *
244445 ATTTTTGTAAAGTCTAATATCTTACCTCAAATGAGACAAATATGGATT-TCAGTAAAGATCCTCA
352 ATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCT-AGTAATGATCTTCG
* ** *
244509 TTCATTTTGTGGTTAGGCACTATAAAC
416 TTCATTTTGTGATTAAACACTACAAAC
* * * * ** * *
244536 GCTTTCTACTCATTAGGATAAATGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTTGCC
1 -ATTTCT--T--TT-GCAT---GGA-A---AT-CTTTTCTTTGCCCT----A--TTTTCCTT---
** * * *
244601 CAATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAAACAAGCATCGATTCTCATAACAATCTC
43 -AA-AAT-C--------AAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCT-
* * *
244666 CT-TTCTTTTCAAGATT-GGACAGCAAA-ACCACATTCCCTTTATTAGGATACCTGACATTGATG
96 CTATTCTTTTCAAGATTGGGA-A-CAAAGAACACATTCCCGTTATTAGGATACATGACATTGATG
* * *
244728 CTTTGGTGTCGTAAGAAAAGGTTTT-TTTTCCATCATTTTTGATAGAATCAAAGTTTGTCTCTTA
159 CTTTGGTGTCGCAAGAAAAGCTTTTATTTT-CACCATTTTTGATAGAATCAAAGTTTGTCTCTTA
* * *
244792 AATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTAAGGATTAGGCACTATAAACATA
223 AATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
* ** * *
244857 GTCTTTTCACAAGGATACTTGATATTGACGCCTTGG-TTCTGCAAGAAAGGCTTTCTTCCCTCTC
288 GTCTTTTCATAAGGATACAAGATATTGACGCTTTGGTTTC-GCAAGAAAGGCTTTCTTCCCCCT-
* * * * * * * * * *
244921 AATTTTTGTAGAGTCTAAGTTCGTGCCTTAAATGAGATAAACATGTATTATGGTAGTGATCTTTC
351 AATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATC-TTC
* * * *
244986 -TTCATTCTGTGATTAGACATTATAAAC
415 GTTCATTTTGTGATTAAACACTACAAAC
* * * **
245013 ACTTTCTCCTTCTTAGGATAAATGATATTGATGATTTTCTTTTGCATTGAAATCTTTTCTTTACT
1 A--TT-T-CTT-TT-GCAT---GGA-A---AT-CTTTTC-TTTGCCCT---A--TTTTC----CT
**** * * * ** * * * * *
245078 CTTTTTTCCTTAAAA-TCAAAATTCATCATTTAA-ATAAGACA-AGCTTGATTCTTATAACAGTC
42 -TAAAAT-C--AAAATTC---ATCCCTTAAATAAGACAAG-CATCGATT--CTC--GTAACAGTC
** * * * *
245140 TCCT-TTCTTTTCAAGATT-GGAA-AGTGAAGGCACAATCCC-TTCATTTGCATGCATGACATTG
95 T-CTATTCTTTTCAAGATTGGGAACAAAGAA--CACATTCCCGTT-ATTAGGATACATGACATTG
* * * * * * * * *
245201 -TCGCTTTGGGGTCACGAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAGTCAAAGTTTGTCAC
156 AT-GCTTTGGTGTCGCAAGAAAAGCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTC
* * * *
245265 TTAAATAAGACAAACGTGAATAGTAACACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAAC
220 TTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAAC
* * *
245330 ATAGTCTTTTCATAGGGATGCAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
285 ATAGTCTTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * *
245395 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTC
350 TAATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTC
* * * ** *
245460 ATTCATTTTGTGGTGAGGCACTATAAACAC
415 GTTCATTTTGTGATTAAACACTA-CAA-AC
* * * * ***
245490 ATACTCTTAATTAGGATAAATGATATTGATGATTTTCTTTTACTTGGAAATATTTTCTTTGCCCT
1 AT-TTCTT--TT--G---CATG-----GA--A--ATCTTTT-CTTTGCCCTA------TT----T
* * * *
245555 ATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TCGATTCACATCACAGTCTCCA
38 ----TCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCTA
* * * *
245619 TTCTTTTCAAGATTGGGAAGCGAAG-GCACATTCCC-TTCATTCGGATACATG-CTATTGTTGCT
99 TTCTTTTCAAGATTGGGAA-CAAAGAACACATTCCCGTT-ATTAGGATACATGAC-ATTGATGCT
* * * ** * * *
245681 TTGGTGTTGCAAGAAAAGGTTTTCTTCCCACCATTTTTGATAGAATGAAAGTTTATCCCTTAAAT
161 TTGGTGTCGCAAGAAAAGCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * ** * **
245746 CAGACAAACATGAATAGTCATACTAATCCCAAACCTTTTCAAGATTATTCACCATAAACATAGTC
226 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * ** * *
245811 TTTTCATAAGGATACAAGATATTAACGCCTTCATTTCGCAAGAAAGACTTTCTTCCCACTAATTT
291 TTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCTAATTT
* * * *
245876 TTGTAGAGTCTAAGATCGTACCTCAAATGACACAAACATGGATTCTAGTAATGATCTTCATTCAT
356 TTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCGTTCAT
* ** *
245941 TTTGTGGTTAGGCACTATAAGCAC
421 TTTGTGATTAAACACTACAA--AC
* * * *
245965 TTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCCCGAAAATCTTTTCTTTACCAT
1 -AT-T--TC-TT----T---TG-CA-TG--GA----------------AATCTTTTCTTTGCCCT
* * * * *
246030 ATTTTCCTTAAAATCAAAATTCATCCCTTAAAGAAGACAA-CCTCGATTCTTGTAATAGTCTCTT
34 ATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCTA
**** * * * * *
246094 TTCTTTTCAAGATTGGGGTGTGAAG-GCACA-TCCCTTTCATTCA-GATGCATGGCATTGGTGCT
99 TTCTTTTCAAGATT-GGGAACAAAGAACACATTCCCGTT-ATT-AGGATACATGACATTGATGCT
* * * *
246156 TTGGTGTCGCAAGAAAATG-TTTTCTTTCCACTATTTTTTATAGAATCAAAGTTTGTCTCTTAAA
161 TTGGTGTCGCAAGAAAA-GCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAA
*
246220 TAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGT
225 TAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
* *** * *
246285 CTTTTCATAAAGATACAAGAT-TCTAGTATTTTTTGTGGCTTAAATGAGACAA-ACAAGG-ATTC
290 CTTTTCATAAGGATACAAGATAT-T-G-A-CGCTT-TGG-TT---T-CG-CAAGA-AAGGCTTTC
***** * *** * * * * ***** * * *
246347 -T-AGTGGAGATCTTTTTTCATTTTGTAA-TTAG-ACACTGTAAAT-AGTTTCTCCTCG-TT-AA
343 TTCCCCCTA-AT-TTTTGT-AAACTCTAAGATCGTAC-CT-CAAATGAGACAAACATGGATTCTA
* * * * ** **
246405 GATAAATGATATT-GATGATTTTCT--TT-TGCA-TGGAAAGC
403 G-T-AATGATCTTCGTTCATTTTGTGATTAAACACTACAAA-C
*
246443 -TTT-TCTT---T----A-C----C--T----TATTTTCCTTAAAATCAAAATTCATCCC-TATA
1 ATTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTA-A
* * * * * * * * *
246487 ATAAAATAAGCAACAATTCTCATAACAGTATTTATTCTTTTCAAGATTGGGAACCAGGAACACAT
65 ATAAGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACAAAGAACACAT
* * * * * * *
246552 TCCTGTTATTAGGATACATGACATTAATGCTTTGAG-GTCACAAGAAAATCTTTTATCTCCGCCA
130 TCCCGTTATTAGGATACATGACATTGATGCTTTG-GTGTCGCAAGAAAAGCTTTTATTTTCACCA
* ** ** *
246616 TTTTTGATAGAGTCAAAGTTTGTCTCTTAAATAAGACAAATGTGAATAGTCGCACTAATCCCCAC
194 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCAT
* * * *
246681 TCTTTTTAGGATTAAGCACCATAAACATAGTCTTTTCATAGGGATACAAGATATTAACGCTTTGG
259 TCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGACGCTTTGG
* * ** * * * * * *
246746 TTTTGCAAAAAAGGCTTTCACCCCCCCAATTTTTGTAGAGTTTAAGATCGTACCTCAAATAAGGC
324 TTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGAC
* * * * * * ** *
246811 AAAAATAGATTCTAGTAATTATCTTCATTCATTTTATGGTTAGGCACTATAAACAC
389 AAACATGGATTCTAGTAATGATCTTCGTTCATTTTGTGATTAAACACTA-CAA-AC
* * * * * * * * *
246867 ATTCTGCTCATTAGAATAAATGATAGTGATGATTTACTTTTGGATGGATATCTTTTCTTTGCCCT
1 ATT-T-CT--TTTGCAT---GGA-A---AT-CTTT--TCTT---T-G---CCCTAT-TTT-CCTT
** * * * **** **
246932 AATTTCCTTAAAATTAAAATTCATCCCTTAA-ACAAG-A-C-AAACTTCGATTCTTATAACAGTC
43 AAAAT-C--AAAATT--CATCCCTTAAATAAGACAAGCATCGATTC-TCG--T-----AACAGTC
* * * * * *
246993 TCCT-TTCTTTTCATGATTTGGAAGCAAA-AGCGCATTCCC-TTCATTTGGATACCTGACATTGA
95 T-CTATTCTTTTCAAGATTGGGAA-CAAAGAACACATTCCCGTT-ATTAGGATACATGACATTGA
* * * * *
247055 TGCTTTGGTGTCGCAAGAAAAG--TTT-TTTTCTATCGTTTTTTATAGAATCAAAGTTTTTGTCT
157 TGCTTTGGTGTCGCAAGAAAAGCTTTTATTTTC-ACCATTTTTGATAGAATCAAAGTTTGTCTCT
* * * * *
247117 TAAATAAGACAAACATGAATAGTCACACTAATCCACATTATTTTCAAGATTAGGCATCATAAACA
221 TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
* * * * * * *
247182 TAGTCTTCTCATAAGAATACAAGATAATGTCGCTTTGGTTTCGTAAGAAATGCTTTCTTCCCCCC
286 TAGTCTTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCT
* * * * * * *
247247 AATTTTTGTAGAGTCTAAGTTCGTACCTCAAATTAGACAAATATGGATTCTAGTAATGATTTTTG
351 AATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCG
* * * *
247312 TTCATTTTATTATTAGACACTGTAGGCACTTAC
416 TTCATTTTGTGATTAAACAC--TA--CA--AAC
* * **
247345 -TCCTCATTAGGATAAATGATATTGTTGATTTTCTTTTGCTTGGAAAAATTTTTTTTTGGCCCTA
1 AT-TTC-TT----T---TG-CA-TG--GA-AATCTTTT-C---------------TTT-GCCCTA
* * * ** * *
247409 TTTTCCTTAAAATCAAAATTCATTCCTCAAATAAAACAAGC-TCGATTCTTTTAACTGTCTCTTT
35 TTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCTAT
* * * * * *
247473 TCTTTTCAAGATTGTGAACCGAAG-GCACATTCCCTTTATTCGAATACATGACATTGATGCTTTG
100 TCTTTTCAAGATTGGGAA-CAAAGAACACATTCCCGTTATTAGGATACATGACATTGATGCTTTG
* * * ** *
247537 GTGTCGTAAGAAAAGGTTTTCTTCCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
164 GTGTCGCAAGAAAAGCTTTTATTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * * * *
247602 ACGAACTTGAATAGTCACACTAATCCCCATTCTTTTCATGATTAGACAACATAAACATTG-CTTT
229 ACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTT
* * * * * *** *
247666 TCATAAGGATACATGATATTAACACTTTGGTTTCGTAAGAAAGGCTTTAATGAGACTCTAATTTT
294 TCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTT-CT-TCCCCCTAATTTT
* * * * * * * *
247731 TGTAGAGTCTAAGTTTGTGCCTTAAATGAGACAAACATGGATTCCAGTAATGATCTTTGTTTATT
357 TGTAAACTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCG------
* * * **
247796 TTACTATAAGTACTTTCTCTGCATTAGGATA-AATGATATTC
416 TT-C-------A-TTT-TGTG-ATTA--A-ACACT-ACAAAC
* * * * *
247837 TTGATTTTCTTTTG-ACTGAAAATCTTCTCTTTACCCTATTTTCCTTAAAATCAAAATTCAACTC
1 ---A-TTTCTTTTGCA-TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCC
* * *** **
247901 TTAAATAAGACAAGC-TCGATTCACTTAACAGTCTCCT-TTCTTTTCAAGATTGGGAAGTGAGGG
61 TTAAATAAGACAAGCATCGATTCTCGTAACAGTCT-CTATTCTTTTCAAGATTGGGAACAAAGAA
** * * * * *
247964 CACATT-CTTTTCATTTGAATACGTGACATTGATGCTTTGGTGTCGCAAGAAAAG-GTTT-TCTT
125 CACATTCCCGTT-ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTT
* ** * *
248026 ---C-GTTCGGATAGAATCAAAGTTTTTCTCTTAAATAAGACAAACATGAATAGTCATGCTAATC
189 CACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* * * * * *
248087 CCCATTCTTTTTAGGATTAGGCACCAGAAACATAGTCTTTTCATAAAGATACAAGATAATGTCTC
254 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGACGC
* * * * *
248152 TTTGGTTTTGCAAGAAATGCTTTCTTCCACCC-AATTTTTGTAGAGTCTAAGTTCGTACCTCAAA
319 TTTGGTTTCGCAAGAAAGGCTTTCTTCC-CCCTAATTTTTGTAAACTCTAAGATCGTACCTCAAA
* * * *
248216 TGAGACAAACACGGATTCTAGTAATGATTTTTGTTCATTTTGTGATTAGACACTATGAACACTTT
383 TGAGACAAACATGGATTCTAGTAATGATCTTCGTTCATTTTGTGATTAAACAC--T--ACA----
*
248281 TTCCGCATTAGG
440 ------A--A-C
* * *
248293 ATAAATGATATTGTTGATTTAATTTTGCTTGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
1 AT---T--TCTT-TTG----CA-------TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC
* * ** *
248358 AAAATTCATCCCCTAAATAAGACAA-CCTCGATTCTTTTAATAGTCTCCT-TTCTTTTCAAGATT
49 AAAATTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCT-CTATTCTTTTCAAGATT
* * * * * * * *
248421 GGGATGCGAAGGTA-A-ATTCCC-TTCATTCA-GATACGTGACATTGGTGCTTTGGGGTCGTAGG
113 GGGA-AC-AAAGAACACATTCCCGTT-ATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAG
* * * *
248482 AAAAGGTTTT-TTTCTC-CCGTTTTTGATAGAATCAAAGTTTATCTCTTAGATAAGACAAACATG
174 AAAAGCTTTTATTT-TCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* *
248545 AATAGTCATACTAAT-CCCATTCTTTTCAGGATTAGGCACCACAAACATAGT-TTTTCATAAAGA
238 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGA
* * * *
248608 TACAAGATATTAACGCTTTGGTTTCGCAAAAAAGGCTTTTTTCCCCCTAATTTTTGTAAAGTCTA
303 TACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAAACTCTA
*
248673 AGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGG
368 AGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCGTTCA-TTT-T-G-T--G
* *
248738 CACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATG
427 -A-T-T-AA-ACA-------C-------T--A-CA-A---A-C
* ** *
248781 ATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCGATTTTCCTTAAAATCAAAATTCAAACTTTAA
1 A-TTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAA
** * * *
248846 ATAAGACAAGC-TCGATTCTTATAGCAGTCTCCT-TTCTTTTCAAGATTGGGAAGCGAAG-GCAC
65 ATAAGACAAGCATCGATTCTCGTAACAGTCT-CTATTCTTTTCAAGATTGGGAA-CAAAGAACAC
* * * * * *
248908 ATTCCC-TTCATTCGGATACGTGACATTGATGCTTTCGTGTTGCAAGAAAATG-TTTTCTTTCCA
128 ATTCCCGTT-ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA-GCTTTTATTTTCA
* * *
248971 CCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATAGTCCTATTAATCCC
191 CCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCC
* ** *
249036 CATTCTTTTCAGGATTGGGTGCCATAAACTTAGT
256 CATTCTTTTCAGGATTAGGCACCATAAACATAGT
249070 TGAAAGCTCA
Statistics
Matches: 6032, Mismatches: 1155, Indels: 1193
0.72 0.14 0.14
Matches are distributed among these distances:
417 16 0.00
418 25 0.00
419 15 0.00
420 3 0.00
421 2 0.00
422 5 0.00
423 4 0.00
424 5 0.00
425 6 0.00
426 42 0.01
427 183 0.03
428 8 0.00
430 2 0.00
432 1 0.00
433 1 0.00
436 1 0.00
437 1 0.00
439 1 0.00
440 1 0.00
441 7 0.00
442 32 0.01
443 355 0.06
444 8 0.00
445 7 0.00
446 11 0.00
447 302 0.05
448 53 0.01
449 5 0.00
450 4 0.00
451 7 0.00
452 4 0.00
453 3 0.00
454 3 0.00
455 11 0.00
456 6 0.00
457 11 0.00
458 4 0.00
459 64 0.01
460 84 0.01
461 47 0.01
462 4 0.00
463 5 0.00
464 8 0.00
465 18 0.00
466 136 0.02
467 13 0.00
468 14 0.00
469 138 0.02
470 22 0.00
471 23 0.00
472 311 0.05
473 421 0.07
474 343 0.06
475 1103 0.18
476 1332 0.22
477 352 0.06
478 93 0.02
479 29 0.00
480 36 0.01
481 24 0.00
482 21 0.00
483 41 0.01
484 37 0.01
485 26 0.00
486 19 0.00
487 10 0.00
488 10 0.00
489 9 0.00
490 10 0.00
491 4 0.00
492 7 0.00
493 5 0.00
494 5 0.00
495 12 0.00
496 12 0.00
497 3 0.00
498 1 0.00
499 2 0.00
500 8 0.00
504 3 0.00
506 3 0.00
508 1 0.00
509 3 0.00
510 5 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (442 bp):
ATTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA
TAAGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTTCAAGATTGGGAACAAAGAACACATT
CCCGTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTTCACCATT
TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTC
TTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTGACGCTTTGGTT
TCGCAAGAAAGGCTTTCTTCCCCCTAATTTTTGTAAACTCTAAGATCGTACCTCAAATGAGACAA
ACATGGATTCTAGTAATGATCTTCGTTCATTTTGTGATTAAACACTACAAAC
Found at i:243246 original size:475 final size:475
Alignment explanation
Indices: 241728--246301 Score: 5148
Period size: 476 Copynumber: 9.6 Consensus size: 475
241718 CTCCTCATTG
* * * *
241728 CATGGAAATCTTTTTTTTGCCCTATTTTCCTTAAAAATCAAAATTCATCCTTTATATAAGACAAG
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTT-AAAATCAAAATTCATCCCTTAAATAAGACAAG
** * * * * * *
241793 C-TCGATTCTT-GTAACAGTCTCTTTTCTTTTCAAGATTGGGAAGCAA-AGGCACTTTATCATCA
65 CATCGATT-TTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGA-ACACATT-CCCTTA
* * * * *
241855 TTAGGATAAATGACATTGGTGCTTTGGTGTTGCAAGAAAAGCTTTTATTTTCACCATTTTTTATA
127 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATA
* * * * *
241920 GAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAACAGTCATGCCAATCCCCATTCTTTTTGG
192 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTTAG
** * * *
241985 GATTAGGCACCATAAACACGGTCTTTTCATAAGGATAC-TCGATATTGATGCTTAGGTTTCGTAA
257 GATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAT-GATATTGACGCTTTGGTTTCGCAA
* * *
242049 GAAAGGCTTTTTTCCCCCC-ATATTTTGTAGCGTCTAAGATCGTACCTCAAATGAGACAAACATA
321 GAAAGGCTTTCTTCCCCCCAAT-TTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATG
* * * * * *
242113 GATTCTACTAATGATCTTCA-TCAATTTGTGGTTAGGCAC-ATAAACACATTCTCCGCATTAGGT
385 GATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGA
*
242176 TAAATGATATTGATGATTTCTTTTTG-
450 TAAATGATATTGATGATTT-TCTTTGA
* * * * * * *
242202 CATGGAAA-CTTTTGTTTGCCCTATTTTCGTTAAAATCAAAATCCATCCCTTTAATAAGATAGGC
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
* * * * * *
242266 AACGATTATCCTAACAGTCTCTATTCATTTCAAGATTAGGAACCAAGAACACATTCCCGTTATTA
66 ATCGATTTTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAACACATTCCC-TTATTA
* ** * * *
242331 GGATACAAGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTATTTTCACCGTTTTTTATAGAA
130 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATAGAA
* * *
242396 TCAAAGTTTGCCTCTTAAATAAGACAAACAAGAATAGTCATACTAATCCCCATTTTTTTCTA-GA
195 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT-TAGGA
* * * * * * *
242460 TTAGACACCATAAACATAGTCTTTTTATAAGGATGCAAGATATTCACGCTTTGGTTTTGTAAGAA
259 TTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGACGCTTTGGTTTCGCAAGAA
** * * *
242525 AGGCTTTCTTCCCCTAAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATT
324 AGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATT
* ** * * * * * * *
242590 CAAGTAATGATCTTTGTTCATTTCGTGATTAGACACTGTAAAAACTTTTTTCTCATTAAGATAAA
389 CTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGATAAA
242655 TGATATTGATGATTTTCTTTTG-
454 TGATATTGATGATTTTC-TTTGA
* * * * *
242677 CATTGAAGTATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTTATCCAC-TCAATAAGATAAG
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCC-CTTAAATAAGACAAG
* *
242741 CATCGATTTTCGTAATC-GTCTCCATTATTTTCAAGATTGGGAACCAAGAACACATTCTCGTT-T
65 CATCGATTTTCGTAA-CAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAACACATTC-CCTTAT
** * * **
242804 TGAGGATACATGACATTGATATTTTGGTGTTGCAACAATTGCTTTTATTTCCACCATTTTTGATA
128 T-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATA
* *
242869 GAATCAAAGTTTGTCTCTTAAATCGAA-A-AAACATGAATAGTCATACCAATCCCAATTCTTTTT
192 GAATCAAAGTTTGTCTCTTAAAT--AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTT
* *
242932 AGGATTAGGCACCATAAACATAGTCTTTTCATAAAGATACATGATATTGACGCTTTGGTTTCGCG
255 AGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGACGCTTTGGTTTCGCA
* * *
242997 AGAAAGGCTTTCTTCCCCCCAA-TTTTGTAGAGTCTAGGATCTTACGTCAAATGAGACAAACATG
320 AGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATG
* * *
243061 GATTCTAGTAATGATCCTCATTCATTCTGTGGTTAGGCACTATAAACATTTTCTTCTCATTAGGA
385 GATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGA
* *
243126 TAAATGATATTGATCATTTTGTTTGA
450 TAAATGATATTGATGATTTTCTTTGA
* * * *
243152 TATGAAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCAC-TCAATAAGATAAG
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCC-CTTAAATAAGACAAG
* * * **
243216 CATCGATTTTCGTAATC-GTTTCCATTATTTTCAAGATTGGGAACCAAGAGCACATTCTTGTTAT
65 CATCGATTTTCGTAA-CAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAACACATTC-CCTTAT
* ** ** * *
243280 GAGGATACATGACATTGATATTTTGGTGTCGCAAGAATTGCTTTTATTTCCACCGTTTTGGATAG
128 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
* * * *
243345 AATCAAAGTTTGTCTCTTAAACT-GGACAAACATGAATACTTATTAC-AATCCCAATTCTTTTTA
193 AATCAAAGTTTGTCTCTTAAA-TAAGACAAACATGAATAGTCA-TACTAATCCCCATTCTTTTTA
* *
243408 GGATTAGGCACCATAAACATAGTCTTTTCATAAAGG-TACTTGATATTGACGCTTTGGTTTCGCG
256 GGATTAGGCACCATAAACATAGTCTTTTCAT-AAGGATACATGATATTGACGCTTTGGTTTCGCA
* * *
243472 AGAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGATCTTACCTCAAATGAGAAAAACATG
320 AGAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATG
* * * * *
243537 GATTCTAGTAATGATCCTCATTCATTCTGTGCTTAGGCACTATAAACATTTTCTTTTCATTAGGA
385 GATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGA
*
243602 TAAATGATATTGATGATTTTCTTTTA
450 TAAATGATATTGATGATTTTCTTTGA
* * * * *
243628 CATGGAAATATTTTATTTGCCCTATTTTACTTAAAATCAAAATTCACCCCTTAAATATGACACGC
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
* * * * * *
243693 ATCAATTCTCATAACAATCTCCTTTTCTTTTCAAGATTGGGAAGCAA-AAGCACATTCCCTTTAT
66 ATCGATTTTCGTAACAGTCTCC-ATTCTTTTCAAGATTGGGAACCAAGAA-CACATTCCC-TTAT
* * * * * * *
243757 TAGGATACCTAATATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTTACAG
128 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
* ** *
243822 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTGTCGCACTAA-CCCCATTCTTTTCAGG
193 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTTAGG
* * * * * * *
243886 ATTAGGTACTATAAACATTGTCATTTCACAAGGATACAAGATATT--CGCCTTTTGGTTTTGCAA
258 ATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGACG-C-TTTGGTTTCGCAA
* * * * **
243949 AAAAGGTTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCACACCTCAAATGAGACAAACATGG
321 GAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGG
* ** * * *
244014 ATTCTAGTAATGATATTTGTCCATTTTGTGATTAGACACTATAAACACTTTCTTCTCATTAGGAT
386 ATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGAT
* *
244079 AAATGATAATGATGATTTTCTTTCA
451 AAATGATATTGATGATTTTCTTTGA
* * * *
244104 CATTGAATTATTTTCTTTGCCCTATTTTCCCTAAAATCAAAATTCATCCAC-TCAATAAGACAAG
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCC-CTTAAATAAGACAAG
* * * * * * *
244168 CTTTGATTTTTGTAATC-GTCACCATTATTTTCAAGATTGGGAACAAAGAACACATTCTCATTAT
65 CATCGATTTTCGTAA-CAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAACACATTC-CCTTAT
* * * * ** * * *
244232 TAGCATACATGACATTAATGTTTTGGTGTCGCAATAATTGCTTTTATTTTCGCCGTTTTTGATAG
128 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
* ** * *
244297 AATCAATGTTTGTCTCTTAAATTGGACAAACATGAATAGTCATA-TCAGTCCCAATTCTTTTTAG
193 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACT-AATCCCCATTCTTTTTAG
* * *
244361 GATTAGGCACCATAAACATAATCTTTTCATAAAGATAC-TCGATATTGACGCTTTGGTTTTGCAA
257 GATTAGGCACCATAAACATAGTCTTTTCATAAGGATACAT-GATATTGACGCTTTGGTTTCGCAA
* * * * * *
244425 GAAAGGCTTTATTCCCCTCAATTTTTGTAAAGTCTAATATCTTACCTCAAATGAGACAAATATGG
321 GAAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGG
* * * *
244490 ATT-TCAGTAAAGATCCTCATTCATTTTGTGGTTAGGCACTATAAACGCTTTCTACTCATTAGGA
386 ATTCT-AGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGA
*
244554 TAAATGATATTGATGATTTTCTTTTA
450 TAAATGATATTGATGATTTTCTTTGA
* * *
244580 CATGGAAATCTTTTCTTTGCCCAATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAAACAAGC
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
* * * * *
244645 ATCGATTCTCATAACAATCTCCTTTCTTTTCAAGATT-GGACAGCAA-AACCACATTCCCTTTAT
66 ATCGATTTTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA-ACCAAGAA-CACATTCCC-TTAT
* * * * *
244708 TAGGATACCTGACATTGATGCTTTGGTGTCGTAAGAAAAGGTTTTTTTTCCATCATTTTTGATAG
128 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
* *
244773 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCATTCTTTTAAGG
193 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTTAGG
* * * *
244838 ATTAGGCACTATAAACATAGTCTTTTCACAAGGATACTTGATATTGACGCCTTGG-TTCTGCAAG
258 ATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGACGCTTTGGTTTC-GCAAG
* * * * * *
244902 AAAGGCTTTCTTCCCTCTCAATTTTTGTAGAGTCTAAGTTCGTGCCTTAAATGAGATAAACATGT
322 AAAGGCTTTCTTCCC-CCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGG
* * * * * * * *
244967 ATTATGGTAGTGATCTTTC-TTCATTCTGTGATTAGACATTATAAACACTTTCTCCTTC-TTAGG
386 ATTCTAGTAATGATC-TTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTC-TCATTAGG
245030 ATAAATGATATTGATGATTTTCTTTTG-
449 ATAAATGATATTGATGATTTTC-TTTGA
* * * * * **
245057 CATTGAAATCTTTTCTTTACTCTTTTTTCCTTAAAATCAAAATTCATCATTTAAATAAGACAAGC
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
* * * * ** * *
245122 -TTGATTCTT-ATAACAGTCTCCTTTCTTTTCAAGATTGGAAAGTGAAG-GCACAATCCCTTCAT
66 ATCGATT-TTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAGAACACATTCCCTT-AT
* * * * * * * * *
245184 TTGCATGCATGACATTG-TCGCTTTGGGGTCACGAGAAAAGGTTTTCTTTCCACCGTTTTTGATA
128 TAGGATACATGACATTGAT-GCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATA
* * * * *
245248 GAGTCAAAGTTTGTCACTTAAATAAGACAAACGTGAATAGTAACACTAATCCCCATTCTTTTTAG
192 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTTAG
* * * *
245313 GATTAGGCACCATAAACATAGTCTTTTCATAGGGATGCAAGATATTAACGCTTTGGTTTCGCAAG
257 GATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGACGCTTTGGTTTCGCAAG
245378 AAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGA
322 AAAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGA
* * * *
245443 TTCTAGTAATGATCTTCATTCATTTTGTGGTGAGGCACTATAAACACATAC-TCTTAATTAGGAT
387 TTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTC-TCATTAGGAT
*
245507 AAATGATATTGATGATTTTCTTTTA
451 AAATGATATTGATGATTTTCTTTGA
*
245532 CTTGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
** * * * *
245597 -TCGATTCACATCACAGTCTCCATTCTTTTCAAGATTGGGAAGCGAAG-GCACATTCCCTTCATT
66 ATCGATTTTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAGAACACATTCCCTT-ATT
* * * * * *
245660 CGGATACATG-CTATTGTTGCTTTGGTGTTGCAAGAAAAGGTTTTCTTCCCACCATTTTTGATAG
129 AGGATACATGAC-ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
* * * * * ** * *
245724 AATGAAAGTTTATCCCTTAAATCAGACAAACATGAATAGTCATACTAATCCCAAACCTTTTCAAG
193 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTTAGG
** * * * **
245789 ATTATTCACCATAAACATAGTCTTTTCATAAGGATACAAGATATTAACGCCTTCATTTCGCAAGA
258 ATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGACGCTTTGGTTTCGCAAGA
* * * *
245854 AAGACTTTCTTCCCACTAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGACACAAACATGGAT
323 AAGGCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGAT
* *
245919 TCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAGCACTTTCTCCTCATTAGGATAA
388 TCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGATAA
245984 ATGATATTGATGATTTTCTTTTG-
453 ATGATATTGATGATTTTC-TTTGA
** * * * * *
246007 CCCGAAAATCTTTTCTTTACCATATTTTCCTTAAAATCAAAATTCATCCCTTAAAGAAGACAA-C
1 CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
* * ** **** *
246071 CTCGATTCTT-GTAATAGTCTCTTTTCTTTTCAAGATTGGGGTGTGAAG-GCACA-TCCCTTTCA
66 ATCGATT-TTCGTAACAGTCTCCATTCTTTTCAAGATT-GGGAACCAAGAACACATTCCC-TT-A
* * * * * *
246133 TTCA-GATGCATGGCATTGGTGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACTATTTTTTA
127 TT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA-GCTTTTATTTCCACCATTTTTGA
246196 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTT
190 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTT
*
246261 AGGATTAGGCACCATAAACATAGTCTTTTCATAAAGATACA
255 AGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACA
246302 AGATTCTAGT
Statistics
Matches: 3489, Mismatches: 530, Indels: 161
0.83 0.13 0.04
Matches are distributed among these distances:
472 29 0.01
473 299 0.09
474 51 0.01
475 1362 0.39
476 1435 0.41
477 301 0.09
478 12 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (475 bp):
CATGGAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC
ATCGATTTTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAACACATTCCCTTATTAG
GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTATTTCCACCATTTTTGATAGAAT
CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTTAGGATT
AGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGACGCTTTGGTTTCGCAAGAAAG
GCTTTCTTCCCCCCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCT
AGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACTTTCTTCTCATTAGGATAAATG
ATATTGATGATTTTCTTTGA
Found at i:246706 original size:427 final size:425
Alignment explanation
Indices: 245900--246732 Score: 1045
Period size: 427 Copynumber: 2.0 Consensus size: 425
245890 ATCGTACCTC
* ** * *
245900 AAATGACACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAGCAC
1 AAATGACACAAACAAGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGACACTATAAACAC
* * *
245965 TTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCCCGAAAATCTTTTCTTTACCAT
66 TTTCTCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCACGAAAAGCTTTTCTTTACCAT
** * ** * *
246030 ATTTTCCTTAAAATCAAAATTCATCCCTTAAAGAAGACAACCTCGATTCTTGTAATAGTCTCTTT
131 ATTTTCCTTAAAATCAAAATTCATCCCTTAAAGAAGACAACAACAATTCTCATAACAGTATCTTT
** * * **
246095 TCTTTTCAAGATTGGGGTGTGAAGGCACATCCCTTTCATTCAGATGCATGGCATTGGTGCTTTGG
196 TCTTTTCAAGATTGGGCAGTGAA-GCACATCCCTTTCATTCAGATACATGACATTAATGCTTTGG
* * * * * *
246160 TGTCGCAAGAAAATGTTTTCTTTCCACTATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGA
260 TGTCACAAGAAAATCTTTTATCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
246225 CAAACATGAATAGTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTT
325 CAAACATGAATAGTCACACTAATCCCCACTCTTTTTAGGATTAAGCACCATAAACATAGTCTTTT
246290 CATAAAGATACAAGATTCTAGTATTTTTTGTGGCTT
390 CATAAAGATACAAGATTCTAGTATTTTTTGTGGCTT
* * ** * *
246326 AAATGAGACAAACAAGGATTCTAGTGGA-GATCTTTTTTCATTTTGTAATTAGACACTGTAAATA
1 AAATGACACAAACAAGGATTCTAGT-AATGATCTTCATTCATTTTGTAATTAGACACTATAAACA
* * * * *
246390 GTTTCTCCTCGTTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAAGCTTTTCTTTACCT
65 CTTTCTCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCACGAAAAGCTTTTCTTTACCA
*
246455 TATTTTCCTTAAAATCAAAATTCATCCCTATAATA-AA-ATAAGCAACAATTCTCATAACAGTAT
130 TATTTTCCTTAAAATCAAAATTCATCCCT-TAA-AGAAGACAA-CAACAATTCTCATAACAGTAT
*
246518 -TTATTCTTTTCAAGATTGGGAACCAG-GAA-CACATTCCTGTT-ATT-AGGATACATGACATTA
192 CTT-TTCTTTTCAAGATTGGG---CAGTGAAGCACATCCCT-TTCATTCA-GATACATGACATTA
* *
246578 ATGCTTTGAG-GTCACAAGAAAATCTTTTATCTCCGCCATTTTTGATAGAGTCAAAGTTTGTCTC
251 ATGCTTTG-GTGTCACAAGAAAATCTTTTATCTCCACCATTTTTGATAGAATCAAAGTTTGTCTC
** *
246642 TTAAATAAGACAAATGTGAATAGTCGCACTAATCCCCACTCTTTTTAGGATTAAGCACCATAAAC
315 TTAAATAAGACAAACATGAATAGTCACACTAATCCCCACTCTTTTTAGGATTAAGCACCATAAAC
**
246707 ATAGTCTTTTCATAGGGATACAAGAT
380 ATAGTCTTTTCATAAAGATACAAGAT
246733 ATTAACGCTT
Statistics
Matches: 346, Mismatches: 50, Indels: 21
0.83 0.12 0.05
Matches are distributed among these distances:
426 143 0.41
427 195 0.56
428 4 0.01
429 3 0.01
430 1 0.00
ACGTcount: A:0.32, C:0.17, G:0.14, T:0.37
Consensus pattern (425 bp):
AAATGACACAAACAAGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGACACTATAAACAC
TTTCTCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCACGAAAAGCTTTTCTTTACCAT
ATTTTCCTTAAAATCAAAATTCATCCCTTAAAGAAGACAACAACAATTCTCATAACAGTATCTTT
TCTTTTCAAGATTGGGCAGTGAAGCACATCCCTTTCATTCAGATACATGACATTAATGCTTTGGT
GTCACAAGAAAATCTTTTATCTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
AAACATGAATAGTCACACTAATCCCCACTCTTTTTAGGATTAAGCACCATAAACATAGTCTTTTC
ATAAAGATACAAGATTCTAGTATTTTTTGTGGCTT
Found at i:247298 original size:474 final size:474
Alignment explanation
Indices: 246326--249069 Score: 3027
Period size: 474 Copynumber: 5.8 Consensus size: 474
246316 TTTGTGGCTT
* * ** * * * *
246326 AAATGAGACAAACAAGGATTCTAGTGGA-GATCTTTTTTCATTTTGTAATTAGACACTGTAAATA
1 AAATGAGACAAACATGGATTCTAGT-AATGATCTTCATTCATTTTATGATTAGACACTATAAACA
** * * * *
246390 GTTTCTCCTCGTTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAAGCTTTTCTTTACCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCC
* * * * * *
246455 TATTTTCCTTAAAATCAAAATTCATCCC-TATAATAAAATAAGCAACAATTCTCATAACAGTAT-
130 TATTTTCCTTAAAATCAAAATTCATCCCTTA-AATAAGACAAGC-TCGATTCTTATAACAGTCTC
* * * * * *
246518 TTATTCTTTTCAAGATTGGGAA-C-CAGGAACACATT-CCTGTTATTAGGATACATGACATTAAT
193 CT-TTCTTTTCAAGATTGGGAAGCGAAGG--CACATTCCCT-TCATTCGGATACGTGACATTGAT
* ** * ** * *
246580 GCTTTGAG-GTCACAAGAAAATCTTTTATCTCCGCCATTTTTGATAGAGTCAAAGTTTGTCTCTT
254 GCTTTG-GTGTCGCAAGAAAAGGTTTT-TTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTT
** * * * *
246644 AAATAAGACAAATGTGAATAGTCGCACTAATCCCCACTCTTTTTAGGATTAAGCACCATAAACAT
317 AAATAAGACAAACATGAATAGTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
* * * * **
246709 AGTCTTTTCATAGGGATACAAGATATTAACGCTTTGGTTTTGCAAAAAAGGCTTTCACCCCCCCA
382 AGTCTTTTCATAAGAATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCA
* *
246774 ATTTTTGTAGAGTTTAAGATCGTACCTC
447 ATTTTTGTAGAGTCTAAGTTCGTACCTC
* * * * * * *
246802 AAATAAGGCAAAAATAGATTCTAGTAATTATCTTCATTCATTTTATGGTTAGGCACTATAAACAC
1 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGACACTATAAACAC
* * * * * * *
246867 ATTCTGCTCATTAGAATAAATGATAGTGATGATTTACTTTTGGATGGATATCTTTTCTTTGCCCT
66 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCT
* * * *
246932 AATTTCCTTAAAATTAAAATTCATCCCTTAAACAAGACAAACTTCGATTCTTATAACAGTCTCCT
131 ATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TCGATTCTTATAACAGTCTCCT
* * * * * * *
246997 TTCTTTTCATGATTTGGAAGCAAAAGCGCATTCCCTTCATTTGGATACCTGACATTGATGCTTTG
195 TTCTTTTCAAGATTGGGAAGCGAAGGCACATTCCCTTCATTCGGATACGTGACATTGATGCTTTG
* * * *
247062 GTGTCGCAAGAAAA-GTTTTTTTCTATCGTTTTTTATAGAATCAAAGTTTTTGTCTTAAATAAGA
260 GTGTCGCAAGAAAAGGTTTTTTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * *
247126 CAAACATGAATAGTCACACTAATCCACATTATTTTCAAGATTAGGCATCATAAACATAGTCTTCT
325 CAAACATGAATAGTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTT
* ** * *
247191 CATAAGAATACAAGATAATGTCGCTTTGGTTTCGTAAGAAATGCTTTCTTCCCCCCAATTTTTGT
390 CATAAGAATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGT
247256 AGAGTCTAAGTTCGTACCTC
455 AGAGTCTAAGTTCGTACCTC
* * * ** * * **
247276 AAATTAGACAAATATGGATTCTAGTAATGATTTTTGTTCATTTTATTATTAGACACTGTAGGCAC
1 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGACACTATAAACAC
* * * *
247341 -TTACTCCTCATTAGGATAAATGATATTGTTGATTTTCTTTTGCTTGGAAAAAT-TTTTTTTTGG
66 ATT-CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGG--AAATCTTTTCTTT-A
* * * * *
247404 CCCTATTTTCCTTAAAATCAAAATTCATTCCTCAAATAAAACAAGCTCGATTCTTTTAACTGTCT
127 CCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCTCGATTCTTATAACAGTCT
* * * * * *
247469 CTTTTCTTTTCAAGATTGTGAACCGAAGGCACATTCCCTTTATTCGAATACATGACATTGATGCT
192 CCTTTCTTTTCAAGATTGGGAAGCGAAGGCACATTCCCTTCATTCGGATACGTGACATTGATGCT
* * *
247534 TTGGTGTCGTAAGAAAAGGTTTTCTTCCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
257 TTGGTGTCGCAAGAAAAGGTTTT-TTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * * * *
247599 AAGACGAACTTGAATAGTCACACTAATCCCCATTCTTTTCATGATTAGACAACATAAACATTG-C
321 AAGACAAACATGAATAGTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * * * *** * *
247663 TTTTCATAAGGATACATGATATTAACACTTTGGTTTCGTAAGAAAGGCTTTAATGAGACTCTAAT
386 TTTTCATAAGAATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTT-CT-TCCCCCCAAT
* * *
247728 TTTTGTAGAGTCTAAGTTTGTGCCTT
449 TTTTGTAGAGTCTAAGTTCGTACCTC
* * * **
247754 AAATGAGACAAACATGGATTCCAGTAATGATC-T--TT--GTTTAT--TT---TACTATAAGTAC
1 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGACACTATAAACAC
* ** * *
247809 TTTCT-CTGCATTAGGATAAATGATATTCTTGATTTTCTTTTG-ACTGAAAATCTTCTCTTTACC
66 ATTCTCCT-CATTAGGATAAATGATATTGATGATTTTCTTTTGCA-TGGAAATCTTTTCTTTACC
* * *
247872 CTATTTTCCTTAAAATCAAAATTCAACTCTTAAATAAGACAAGCTCGATTCACT-TAACAGTCTC
129 CTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCTCGATTC-TTATAACAGTCTC
* * ** * *
247936 CTTTCTTTTCAAGATTGGGAAGTGAGGGCACATTCTTTTCATTTGAATACGTGACATTGATGCTT
193 CTTTCTTTTCAAGATTGGGAAGCGAAGGCACATTCCCTTCATTCGGATACGTGACATTGATGCTT
* ** *
248001 TGGTGTCGCAAGAAAAGG---TTTTCT-TCG-TTCGGATAGAATCAAAGTTTTTCTCTTAAATAA
258 TGGTGTCGCAAGAAAAGGTTTTTTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAA
** * *
248061 GACAAACATGAATAGTCATGCTAATCCCCATTCTTTTTAGGATTAGGCACCAGAAACATAGTCTT
323 GACAAACATGAATAGTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * * * *
248126 TTCATAA-AGATACAAGATAATGTCTCTTTGGTTTTGCAAGAAATGCTTTCTTCCACCCAATTTT
388 TTCATAAGA-ATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTT
248190 TGTAGAGTCTAAGTTCGTACCTC
452 TGTAGAGTCTAAGTTCGTACCTC
* * ** * *
248213 AAATGAGACAAACACGGATTCTAGTAATGATTTTTGTTCATTTTGTGATTAGACACTATGAACAC
1 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGACACTATAAACAC
* * * * ** *
248278 TTTTTCCGCATTAGGATAAATGATATTGTTGATTTAATTTTGCTTGGAAATCTTTTCTTTACCCT
66 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCT
* * * *
248343 ATTTTCCTTAAAATCAAAATTCATCCCCTAAATAAGACAACCTCGATTCTTTTAATAGTCTCCTT
131 ATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCTCGATTCTTATAACAGTCTCCTT
* * * * *
248408 TCTTTTCAAGATTGGGATGCGAAGGTAAATTCCCTTCATTCAGATACGTGACATTGGTGCTTTGG
196 TCTTTTCAAGATTGGGAAGCGAAGGCACATTCCCTTCATTCGGATACGTGACATTGATGCTTTGG
* * * * * *
248473 GGTCGTAGGAAAAGGTTTTTTTCTCCCGTTTTTGATAGAATCAAAGTTTATCTCTTAGATAAGAC
261 TGTCGCAAGAAAAGGTTTTTTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* *
248538 AAACATGAATAGTCATACTAAT-CCCATTCTTTTCAGGATTAGGCACCACAAACATAGT-TTTTC
326 AAACATGAATAGTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTC
* * *
248601 ATAA-AGATACAAGATATTAACGCTTTGGTTTCGCAAAAAAGGCTTTTTTCCCCCTAATTTTTGT
391 ATAAGA-ATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGT
* *
248665 AAAGTCTAAGATCGTACCTC
455 AGAGTCTAAGTTCGTACCTC
* * *
248685 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACAC
1 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGACACTATAAACAC
* * *
248750 ATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCG
66 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCT
** * *
248815 ATTTTCCTTAAAATCAAAATTCAAACTTTAAATAAGACAAGCTCGATTCTTATAGCAGTCTCCTT
131 ATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCTCGATTCTTATAACAGTCTCCTT
*
248880 TCTTTTCAAGATTGGGAAGCGAAGGCACATTCCCTTCATTCGGATACGTGACATTGATGCTTTCG
196 TCTTTTCAAGATTGGGAAGCGAAGGCACATTCCCTTCATTCGGATACGTGACATTGATGCTTTGG
* * * * *
248945 TGTTGCAAGAAAATGTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAGGA
261 TGTCGCAAGAAAAGGTTTT-TTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * ** *
249010 CAAACATGAATAGTC-CTATTAATCCCCATTCTTTTCAGGATTGGGTGCCATAAACTTAGT
325 CAAACATGAATAGTCAC-ACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
249070 TGAAAGCTCA
Statistics
Matches: 1891, Mismatches: 334, Indels: 88
0.82 0.14 0.04
Matches are distributed among these distances:
459 56 0.03
460 83 0.04
461 44 0.02
462 5 0.00
463 1 0.00
464 4 0.00
466 135 0.07
467 9 0.00
468 46 0.02
469 187 0.10
470 1 0.00
471 2 0.00
472 326 0.17
473 102 0.05
474 334 0.18
475 101 0.05
476 298 0.16
477 99 0.05
478 58 0.03
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (474 bp):
AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGACACTATAAACAC
ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCT
ATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCTCGATTCTTATAACAGTCTCCTT
TCTTTTCAAGATTGGGAAGCGAAGGCACATTCCCTTCATTCGGATACGTGACATTGATGCTTTGG
TGTCGCAAGAAAAGGTTTTTTTCTACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
AAACATGAATAGTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTTTC
ATAAGAATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTTTTGTA
GAGTCTAAGTTCGTACCTC
Found at i:249842 original size:32 final size:33
Alignment explanation
Indices: 249801--249865 Score: 105
Period size: 32 Copynumber: 2.0 Consensus size: 33
249791 GTCGTTACAA
*
249801 GCAATGTATCGATACATT-CATCATGTATCGAT
1 GCAATGTATCGATACATTGCACCATGTATCGAT
*
249833 GCAATGTATCGATACATTGTACCATGTATCGAT
1 GCAATGTATCGATACATTGCACCATGTATCGAT
249866 ACAAACAGTG
Statistics
Matches: 30, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 18 0.60
33 12 0.40
ACGTcount: A:0.31, C:0.18, G:0.17, T:0.34
Consensus pattern (33 bp):
GCAATGTATCGATACATTGCACCATGTATCGAT
Found at i:249923 original size:20 final size:20
Alignment explanation
Indices: 249898--249952 Score: 76
Period size: 19 Copynumber: 2.8 Consensus size: 20
249888 CTGCCAATTT
**
249898 CATGTATCGATACAATTGTC
1 CATGTATCGATACAATTGAA
*
249918 CATGTATTGATACAA-TGAA
1 CATGTATCGATACAATTGAA
249937 CATGTATCGATACAAT
1 CATGTATCGATACAAT
249953 ATATCAATAC
Statistics
Matches: 30, Mismatches: 4, Indels: 2
0.83 0.11 0.06
Matches are distributed among these distances:
19 16 0.53
20 14 0.47
ACGTcount: A:0.36, C:0.16, G:0.15, T:0.33
Consensus pattern (20 bp):
CATGTATCGATACAATTGAA
Found at i:250515 original size:22 final size:22
Alignment explanation
Indices: 250487--250542 Score: 76
Period size: 22 Copynumber: 2.5 Consensus size: 22
250477 AGTTTTCGTT
* *
250487 TTTCTCCCCTTTAATTAAAGAA
1 TTTCTCCCCCTTAATCAAAGAA
*
250509 TTTCTCCCCCTTAATCAAAGCA
1 TTTCTCCCCCTTAATCAAAGAA
*
250531 TCTCTCCCCCTT
1 TTTCTCCCCCTT
250543 TGTCAAATCT
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
22 30 1.00
ACGTcount: A:0.23, C:0.36, G:0.04, T:0.38
Consensus pattern (22 bp):
TTTCTCCCCCTTAATCAAAGAA
Found at i:256387 original size:21 final size:21
Alignment explanation
Indices: 256345--256387 Score: 50
Period size: 21 Copynumber: 2.0 Consensus size: 21
256335 TTTGTTTTTC
* *
256345 TTAGCTAATTCATTATTTTCA
1 TTAGCTAATTCATTAATATCA
**
256366 TTAGCTAATTTTTTAATATCA
1 TTAGCTAATTCATTAATATCA
256387 T
1 T
256388 CTTGCAATTT
Statistics
Matches: 18, Mismatches: 4, Indels: 0
0.82 0.18 0.00
Matches are distributed among these distances:
21 18 1.00
ACGTcount: A:0.30, C:0.12, G:0.05, T:0.53
Consensus pattern (21 bp):
TTAGCTAATTCATTAATATCA
Found at i:258343 original size:13 final size:13
Alignment explanation
Indices: 258325--258350 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
258315 TACAGCAAGT
258325 ATGTATCGATACA
1 ATGTATCGATACA
258338 ATGTATCGATACA
1 ATGTATCGATACA
258351 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:262524 original size:475 final size:476
Alignment explanation
Indices: 260184--268883 Score: 9390
Period size: 476 Copynumber: 18.5 Consensus size: 476
260174 GATCCTAACA
* * *
260184 ATAGTCTTTTCATAAGGATACACGATATTAAAGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCT
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * * *
260249 TAATTTTCGTAGAGTCTAAGATCGTACCTTAAATGAGAAAAAAATGGATTCTAGTAACGATCTTC
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * *
260314 ATTCATTTTGTGGTTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTT
131 ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTT
* *
260379 TCTTTTGCATGGAAATCTTTTCTTCT-TCCTATTTTCCTTAAAATCAAAATTCATCCCCTT-AAC
196 TCTTTTGCATGGAAATCTTTTCTT-TGCCCTATTTTCCTTAAAATCAAAATTCAT-CCCTTAAAT
* * * * ** *
260442 AAGACAAACATCGATTCTCGTAACAGTCTCCTTTATTTTTAAGATTCAGAAGCAAAAGCACATTC
259 AAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTC
* * * ** * *
260507 CCTTCATTTGGATACCTGACATTGATGCTTTGGTGTCACAAGAACCGTTTTTATTTCTACCGTTT
324 CCTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTT
* * *
260572 TTTATAGAATCAAAGGTTT-CCTCTTAAATAAGACAAACATGAATAGTCATGCTAATCCCCATTC
389 TTGATAGAATCAAA-GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTC
* *
260636 TTTTCAGAATTAGGCACCATAAAT
453 TTTTCAGGATTAGGCACCATAAAC
* * ** *
260660 ACAGTCTTTTCATAAGGATACAAGATAATGTCGCTTTGGTTTCGCAAGAAATGCTTTCTTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * *
260725 CAATTTTTGTAGAGTCTAAGATCATACCTCAAATGAGACAAACACGGATTTTAGTAATGATTTTT
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * * * * *
260790 GTTCATTTTGTGATTAGACACTATGAACACTTTTTCCACATCAGGATAAATG-TAATTGTTGATT
131 ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGAT-ATTGATGATT
** * * * *
260854 AACTTTTGCTTGGAAAACTTTT-TTTACCCTATTTTCCTTAAAATCAAAATTTATCCCTTAAATA
195 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATA
* * * * * * *
260918 AGACAAAC-TCAATTCTCATAACAGTCTCCATTCTTTTTAAGATTGGGAAGAGAAGGCACACTCC
260 AGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTCC
* * * * * * * * *
260982 CTTCATTCGGATACATGGCATTGTTGCTTTGGGGTTGAAAGAAAAGGTTTTCTTTCAATCTTTTT
325 CTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTTT
* * ** * *
261047 TGATAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATTAATAGTCGCACTAATTCCCATTATT
390 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTT
***
261112 TTCAGGATTATTTACCATAAAC
455 TTCAGGATTAGGCACCATAAAC
* *
261134 --AGTCTTTTCATAAGGATACAAGATATTAACGCCTTGGTTTCGCAAG--A--CTTTCTTCTCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * *
261193 TAATTTTTATGGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTC
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* *
261258 ATTCATTTTGTCG-TTAGGCACTATGAACACATTCTCCTCATTAGGATAAATGATATTGATGATT
131 ATTCATTTTGT-GATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATT
* * * *
261322 TCCTCTTGCATGGAAATTTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCA-GCCTTCAAAT
195 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTT-AAAT
** * *
261386 AAGACAAGC-TCGATTCTCATAATGGTCTCCTTTCTTTTCAAGATTGGGAAGTGAAGGCACATTC
259 AAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTC
* * * * * * * *
261450 TCTTCATTCGGATACGTGACATTGATGCTTTGGTGTCACAAGAAATGGTTTTCTTTCTACCATAT
324 CCTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTT
* *
261515 TTGGTAGAATCAAAGTTTGTCTCTTAGATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
389 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
*
261580 TTTTAGGATTAGGCACCATAAAC
454 TTTCAGGATTAGGCACCATAAAC
** * *
261603 GCAGTCTTTTCATAAGGATACATGATATTAAAGCTTTGGTTTCGCAAGAAAGGCTTTCTT-CCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * *
261667 CATATTTTCGTAGAATCTAAGATCGTACCTTAAATGAGATAAACATGGATTCTAGTAAGGATCTT
66 CA-ATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
* * * * *
261732 GATTC--------CTTAGGCACTATAAACACATTCTCCTCATTAGGATAAACGATATTAATGATT
130 TATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATT
*
261789 TTCTTTTGCATGGAAATCTTTTCTTT-CTCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAC
195 TTCTTTTGCATGGAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT
* * * * *** *
261853 AAGACAAACATCGATACTCATAATAGTTTCCTTTCTTTTCAAGATTCAAAAGCAAAAGCACATTC
259 AAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTC
* * * * * *
261918 CCTTCATTTGGATACCTAACATTGATGCTTTGGTGTCACAAGAAAAGTTTTTATTTCTACCGTTT
324 CCTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTT
* * *
261983 TTGATAGAATCAAAGTTTTTCTCTTAAATAAGACAAACATGAATAATCATGCTAATCCCCATTCT
389 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
262048 TTTCAGGATTAGGCACCATAAAC
454 TTTCAGGATTAGGCACCATAAAC
* *** * * *
262071 ATAGTCTTTTCATAAGGATACAAGATAATGTTGGTTTGGTTTCGCAAGAAATGCTTTCTTCCCCT
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * *
262136 TAATTTCTGTAGAGTCTAA-ATTCGTGCCTCAAATGAGACAAACATGCATTCTAGTAACGATTTT
66 CAATTTTTGTAGAGTCTAAGA-TCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
* * ** * * * *
262200 TGTTCTTTTTGCAATTAGACACTGTGAACACTTTCTCCGT-ATTAGGATAAATGATATTGTTGAT
130 TATTCATTTTGTGATTAGGCACTATAAACACTTTCTCC-TCATTAGGATAAATGATATTGATGAT
* * * * * *
262264 TTTCTTTTGCTTGGAAATCTTTTTTTTACCCTATTTTCCCTGAAATCAAAATTAATCCCTTAAAT
194 TTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT
* ** * * *
262329 ATGACAAGC-TCGATTCTTGTAATAGTCTCCTTTCTTTTAAAGATTGGGAAGTGAAAGCACATTC
259 AAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTC
* * * * * * * *
262393 CCTTCATTCAGATACGTGACATTGGTGCTTTAGTGACGCAAGAAAAGGTTTTCTTTCCACTGTAT
324 CCTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTT
*
262458 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCTATTCT
389 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
262523 TTTCAGGATTAGGCACCATAAAC
454 TTTCAGGATTAGGCACCATAAAC
* * *
262546 ATAGTCTTTTCATAAGGATACAAGATATTAACGCCTTGGTTTTGCAAGAAAGACTTTCTTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * *
262611 CAATTTTTATAGAGTCTAATATTGTATCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTT
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* ** * *
262676 ATTCATTTTGTGGTTAGGCACTATATGCACTTTCTCCTCATTAGAATAAATGATATTCATGATTT
131 ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTT
* * *
262741 TCTTTTGCATGAAAATCCTCTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
* * * * * * *
262806 AATAAGCATTGATTCTCGTAACAGTCTCCATTCATTTCAAGATTGGGAACCGAGAA-CACATTCT
261 GACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGA-AAGCACATTC-
* * * * ** * *
262870 CGTT-ATTAGGATACATGACATTGATGCTTTTGG-GTCACACGAAAATCTTTTATTTTCACCATT
324 CCTTCATTCGGATACATGACATTGATGC-TTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTT
** *
262933 TTTGATAG--TCAAAGTTTGTCTCTTAAATAAGACAAACGGGAATAGTCATGA-TAATCCCTATT
388 TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAT-ACTAATCCCCATT
* * *
262995 CTTTTTAGGATTAGGCACCCTAAAG
452 CTTTTCAGGATTAGGCACCATAAAC
* ** *
263020 ATAG-CCTTT--T-----T-C-----A-TAA------GGTTTCGCAAGAAAAACTTTCTTCACCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* ** * *
263064 CAATTTTTGTAGAGTTTAAGATCACACCTCAAATGAGACAAACATGGATTCTAGTAACGATCTTC
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * * *
263129 ATTCATTTAGTGATTAGGCACTACAAACACGTTT-TCCTCTTTAGAATAAATGATATTGATGGTT
131 ATTCATTTTGTGATTAGGCACTATAAACAC-TTTCTCCTCATTAGGATAAATGATATTGAT-GAT
* * * *
263193 TTTCTTTGGCAAGGAAACCTTTTCTTTGGCCTATTTT-C-T---ATCAAAATTCATCCCTTAAAT
194 TTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT
* * **
263253 AAGACAAGC-TCGATTCTCGTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGTGATGGCACATTC
259 AAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTC
* * * ***
263317 CCTTCATTCGGATACGA-GACATTGATGGTTTGGTGTCACAAGAAACA-GTTTTCTTTCCACTAC
324 CCTTCATTCGGATAC-ATGACATTGATGCTTTGGTGTCGCAAGAAA-AGGTTTTATTTCCACCGT
*
263380 TTTTGATAGAATCAAAGTTTGCCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
387 TTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
*
263445 CTTTTCAGGATTAGGCACCATAACC
452 CTTTTCAGGATTAGGCACCATAAAC
* * * * * *
263470 ATTGTCTTTTCGTAAGGATACAAGATATTAATGCTTTGGTTTCACAAGAAAGGCCTTATTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * * * * *
263535 TAACTTTTGTAGAGTCTAAGATCATACCTCAAATAAGACAAACATGGATTCCAATAACGATCCTC
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* *
263600 ATTCATTTTGTGGTTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTT
131 ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTT
*
263665 TC--TT---T-G---TC----C--TG-----TTTTCCTTAAAATCAAAATTCATCCCTTAAGTAA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
* * ** * *
263710 GACAA--A-C-A---TCATAACAGTTTCTTTTCTTTTCAAGATTCAGAAGCAAAAGCGCATTCCC
261 GACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTCCC
* * * * * * * *
263768 CTCATTTGGATACCTAACATTGATGCTTTGGTGTCGCAAGAAAAGTTTTTAATTCTACCGATTTT
326 TTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTTTT
* * * *
263833 GATTGAATCAAAGTTTTTCTCCTAAATAAAACAAACATGAATAGTCATACTAATCCCCATTCTTT
391 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
263898 TCAGGATTAGG-ATCCATAAAC
456 TCAGGATTAGGCA-CCATAAAC
** * *** * *
263919 ATAGAATTTTCATAAGGATACAAGATAATGTGGCTTCGGTTTCGCAAGAAATGCTTTCTTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * * * *
263984 TAATTTTTGTACAATCTAAGTTCGTGCCTCAAATGAGATAAACACGGATTCTAGTAATGATTTTT
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * * *
264049 ATTCATTTTGTGATTAGACACTATGAACACTTTCTCCGCATTAGGAGAAATGATATTGTTGATTT
131 ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTT
* * * * *
264114 ACCTTTCCTTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTTATCCCTTAAATAA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
** * ** * ** *
264179 GACAAGCGA--GATTCTTGTAATAGTCTATTTTCTTTTCAAGAATGGGAAATGAAGGCACATTCC
261 GACAAGC-ATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTCC
** * * * * *
264242 CTTCATTCGGATATGTGACATTGGTACTTTGGTGTCAG-AAGAAAAGGTTTTCTTTTCAACGTTT
325 CTTCATTCGGATACATGACATTGATGCTTTGGTGTC-GCAAGAAAAGGTTTTATTTCCACCGTTT
* *
264306 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGTGGTCATACTAATCCCCATTTT
389 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCA--TT
* *
264371 TTTTTCAGGATTAGGCGCCATAAAC
452 CTTTTCAGGATTAGGCACCATAAAC
* * ** *
264396 ATAGTCTTTTCATAGGGATACAAGATATTAACGCTTTTGTTTCATAAGAAAGGCTTTCTTCCCCT
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * *
264461 CAA-TTTTGTAGAGTTTAAGATTGTACCTCAAATGAGAGAAACATTGATTCTAGTAATGGTCTTC
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * * * * *
264525 AATCATTTTGTGGTTAGGTACTGTAAACACATTCTCCTCTTTAGGATAAATCATATTGATGATTT
131 ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTT
* * *
264590 TCTTTTGTATTGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA-AA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
* * ** * * * *
264654 GATAAACATCCTTTCTCATAATAGTCTCCTTTCTTTTCAAGATTCGGAAGCAAAAGCATATTCCC
261 GACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTCCC
* * ** * * *** *
264719 TTCATTTGGATACCTGACATTGATGCTTTCATGTCGCAAAAAAAGTTTTTATTTTTGCCGTATTT
326 TTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTTTT
* * * *
264784 GATAAAATCAAA-TTTGTCTCTTAAATAAGACAAATAGGAGTAGTCATACTAATCCCCATTCTTT
391 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
*
264848 TCAGGATTAGGCACTATAAAC
456 TCAGGATTAGGCACCATAAAC
* * * * * *
264869 ACAGTTTTTTCATAAGGATA-ATTGATATTGACGCTTTAGTTTCACAAGAAAGGCTTTCTTCCCC
1 ATAGTCTTTTCATAAGGATACA-AGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCC
* * *
264933 CCAATTTTTGTAGTGTCTAA-ATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAGTGATCT
65 CCAATTTTTGTAGAGTCTAAGA-TCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCT
* ** *
264997 TTGTTCATTTTGTGATTAAACACTATAAACACTTTCTCCTCTTTAGGATAAATGATATTGATGAT
129 TTATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGAT
* * * * * *
265062 TTTCTTTTACTTGGAAATCTTTT-TTTACCCTATTTT-CTAAAAAATCAAAATTCCTCCCTTCAA
194 TTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCT-TAAAATCAAAATTCATCCCTTAAA
* * * * * * * * * *
265125 TAAGACAACCATCGATTTTCGTAATAGTTTCCATTCTTTTCAAGATTGAGAA-CCAATAACATAT
258 TAAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAA-AGCACAT
* * * * * * * *
265189 T--CTTGCTATTAGGATACACGACATTCATGCTTCGGTGTTGTAAGAAAAGCTTTTATTTTCACC
322 TCCCTT-C-ATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACC
* * * **
265252 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAGAAACATGAATTGTCGCACTAATCCCCA
385 GTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCA
*
265317 TTCTTTTTAGGATTAGGCACCATAAAC
450 TTCTTTTCAGGATTAGGCACCATAAAC
* * ** *** *
265344 ATTGTATTTTCACGAGGATACAAGATATTGTTGCTTTGGTTTCGCAAGAAAGGTTTTCTTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * * * * * **
265409 CAATTTTTGTAAAGTCAAAGTTTGTGCCTGAAATGAGATAAACAAGGATACTAGTGGTGATCGTT
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATC-TT
* * * * * * *
265474 T-TTCATTTTGCGATTAGACATTATAAATACTTTCTCCTTATCAAGATAAATGATATTGATGATT
130 TATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATT
*
265538 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTGAATT
195 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTT-AAAT
* * * * * * *
265603 AA-ACAACCATCGATTCTCCTAACAGTCTCCATTCCTTTCAAGATTGGGAACCAAAAACACATT-
259 AAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTC
* * * * * * ** *
265666 CCTGTTATTAGGATATATGACATTAATGCTTTGGGGTCACAAGAAAATCTTTTATTTCCACCATT
324 CCT-TCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTT
* * * *
265731 TTTGGTAGAGTCAAAGTTTGTCTCTTAAATAAGATAAACATGAATAGTAATACTAATCCCCATTC
388 TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTC
* * *
265796 TTTTCAAGATTAGGGACCATAAGC
453 TTTTCAGGATTAGGCACCATAAAC
* * * * * *
265820 ATGGTCTTTTCTTAAGGACACAAGATATTAACGTTTTGGTTTCGTAAGAAAAGCTTTCTTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * *
265885 TAATTTTTGTAGAGTCTAAGATCATACCTCAAATGTGACAAACATGGATTCTTGTAATGGTCTTC
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * * *
265950 ATTCATTTTGTGGTTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGACATTGCTTA-TT
131 ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTT
*
266014 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTT-CTATAAAATCAAAATTCATCCCTTCAATA
196 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCT-TAAAATCAAAATTCATCCCTTAAATA
* * * * * *
266078 AGACAAGCATCAATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CTAAGAACACGTT-
260 AGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAA-AGCACATTC
* * * * * * * * * *
266141 CTTGTTATTAGGATACAAGACATTGATGCTTCGGTGTCGTAAAAAAAGCTTTTATTTTCATCGTT
324 CCT-TCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTT
* * * **
266206 TTTTATAGAATTAAAGTTTGTCTCTTAAATAAGACAAATATGAATAGTCGCACTAATCCCCATTC
388 TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTC
*
266271 TTTTTAGGATTAGGCACCATAAAC
453 TTTTCAGGATTAGGCACCATAAAC
* * * * * *
266295 ATTGTCTTTTCACAAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCTC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-C
* * * * **
266360 CCAATTTTTGTAAAGTCTAA-ATTTGTGCC-CTAAATGAGACAAACACGGATTCTAGTGGTGATC
65 CCAATTTTTGTAGAGTCTAAGA-TCGTACCTC-AAATGAGACAAACATGGATTCTAGTAATGATC
* * * * *
266423 GTTT-TTCATTTTTTGATTAGACACTATAAATACTTTCTCCTCATTAAGATAAAGGATATTGATG
128 -TTTATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATG
* * *
266487 ATTTCCTTTTGCATGGAAATCTTGTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTGA
192 ATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAA
* * * * * * *
266552 ATAAAACAAGCATCGATTCTCCTAACAGTCTCAATTT-TTTTCAAGATTTGGAA-CCAAGAACGC
257 ATAAGACAAGCATCGATTCTCATAACAGTCTC-CTTTCTTTTCAAGATTGGGAAGCGAA-AGCAC
* * * * * * ** *
266615 ATT-CTTGTTATTAGGATATATGACATTGATGCTTTGGGGTTGCAAGAAAATCTTTTATTTTCAC
320 ATTCCCT-TCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCAC
** * * * *
266679 TATTTTTGATAGAGTCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGCCGTACTAATCCCC
384 CGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCC
* * *
266744 ATTCTTTTGAAGAATAGGCACCATAAAC
449 ATTCTTTTCAGGATTAGGCACCATAAAC
*
266772 ATAGTCTTTTCATAAGGATACAAGATATTAATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * *
266837 CAATTTTTGTAGAGTCTAAGATCGTATCTCAAACGAGACAAACATGGATTCTAGTAATGATCTTG
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
** * * *
266902 ATTCATTTTGTCG-TT-GGCACTATAAACACAATCTTCTCTTTAGGATAAATGATATTAATGATT
131 ATTCATTTTGT-GATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATT
* * * *
266965 TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC-AAACTAATCACTTAAATA
195 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATA
* *
267029 ACACAAGC-TCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGC-AAAGGCACATTA
260 AGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAA-GCACATTC
** * * * * *
267092 CCAACATTCAGATACATGACATTGTTGCTTGGGTGTCGCAAGAAAAGGTTTTCTTTCCACTGTTT
324 CCTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTT
* *
267157 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACGTGAATAGTCATACTAATCCTCATTCT
389 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
* *
267222 TTTTAGGATTAGGTACCATAAAC
454 TTTCAGGATTAGGCACCATAAAC
* * * * * *
267245 ATAGTCTTTTCATAAGGATACAAGATATTAAGGCCTCGGTTTCGCAAAAAAGGCTTTTTTCCTCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * *
267310 CAATTTTTGTAGAGTCTAAGATCATAACTCAAATGAGACAAACATGGATTCTAGTAATAATATTC
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* *
267375 ATTCATTTTGT-AGTTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGAAT
131 ATTCATTTTGTGA-TTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATT
* * * *
267439 TTCTTTTGCATGAAAATCTTTTCTTTACCCTGTTTTCCTTAAAGTCAAAATTCATCCCTTAAATA
195 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATA
* * ** ** *
267504 AGACAAGCATCAATTCTCATAATAGTCTCCTTTCTTTTCAAGATTCAGAAGTAAAAGCACATTCT
260 AGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTCC
* * * * * * * * * * *
267569 TTTCATTTGGATTTC-GGACACTGATACTTTAGTGTCAC-AGGAAAGGTTTTTATTTCTATCGTT
325 CTTCATTCGGA-TACATGACATTGATGCTTTGGTGTCGCAAGAAAAGG-TTTTATTTCCACCGTT
*
267632 TTTGATTA-AATCAAAATTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
388 TTTGA-TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
* * *
267696 CCTTTCAGGATTTGGAACCATAAAC
452 CTTTTCAGGATTAGGCACCATAAAC
* * * * * ** * * *
267721 AGAGCCTTTTCTTAAGGAAACAAGATAATGTCACTTTGGTTTCACAAGAAATGCTTTCTTCCCCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * * * * *
267786 CAACTTTTGTAGAGTCTAAGTTC-AAGCCTCAAATGACG-TAAACATTGATTCTAGTAATGATCA
66 CAATTTTTGTAGAGTCTAAGATCGTA-CCTCAAATGA-GACAAACATGGATTCTAGTAATGATCT
** * *
267849 TCGTTCATTTTGTGATTAGCCACTATAAACAATTTCTCCTCATTAGGATAAATGATATT-ATTGA
129 TTATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGA-TGA
* * *
267913 TTTTCTTTTGCTTGGAAATCTTTTCTTTGCCATATTTTCCTTAAAATTAAAATTCATCCCTTAAA
193 TTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAA
* * * *
267978 TAAGACAAGC-TTGATTCTCATAACAGTCTCTTTTCTTTTCAAGATTAGGAAGCGAAGGCACATT
258 TAAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATT
* * * *
268042 CCCTTCATTCGGATACATGACATTAATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTTCACCATT
323 CCCTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTT
268107 TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT-ATACTAATCCCCATTC
388 TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTC
* *
268171 TTTTAAGTATTAGGCACCATAAAC
453 TTTTCAGGATTAGGCACCATAAAC
* * * * ** *
268195 GTAGTCTTTTCATAAGAATACATGATATTGATACTTTGGTCTT-GTAAGAAAGGCTTTCTT-CCC
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGT-TTCGCAAGAAAGGCTTTCTTCCCC
* * * * * * *
268258 CCACTTTTCGTAGAGTCTAAGTTTGTGCCTCAAATGGGACAAACATGGATTCTAGTAATTG-TGT
65 CCAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAA-TGATCT
* * * * * *
268322 TTGA-TCATATTGTCATTAGACACTATAAACAC-TTCTTCCTCAATAGGATAAATGACATTGCTG
129 TT-ATTCATTTTGTGATTAGGCACTATAAACACTTTC-TCCTCATTAGGATAAATGATATTGATG
* * * * * * *
268385 ATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCCATTTTCCTTAAATTTAGATTTCATCACTTAA
192 ATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAA
* * * * **
268450 ATAAGAGAAGC-TTGATTCTCATAACCGTGC-CCTTTCTTTTCTAGATTTCGAAGC-AAAG-AGC
257 ATAAGACAAGCATCGATTCTCATAACAGT-CTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCA-C
* * * * * * *
268511 TTTCCCTTCATTAGGATACATGACATTGGTGCTTTGGTGTTGTAGGAAAAGGTTTTCTTTCCACC
320 ATTCCCTTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACC
* * ** * **
268576 ATTTTTCATAGAATGTAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGTCATACTAATCCTAA
385 GTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCA
* * **
268641 TTTTTTTTAGGATTAGGCTGCATAAAC
450 TTCTTTTCAGGATTAGGCACCATAAAC
* * * * * ** * *
268668 ATGGTC-TTTCACAAGGATGCATGATATTATCGCTTTGGTTTCATAAGAAAGGCTTTCTTTCCCA
1 ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
* * *
268732 CAATTTTTGTAAATTCTAAGATCGTACCTCAAATGAGACAAACGTGGATTCTAGTAATG-T-TTT
66 CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
* * * * *
268795 CATTCATTTTATGGTTAGGCACTACAAACACTTTCTCCTCATTAGGATAAAAGGTATTGATGATT
131 -ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATT
*
268860 TTCTTTTGCATGAAAATCTTTTCT
195 TTCTTTTGCATGGAAATCTTTTCT
268884 GTTAGGATCT
Statistics
Matches: 6892, Mismatches: 1152, Indels: 364
0.82 0.14 0.04
Matches are distributed among these distances:
447 8 0.00
448 98 0.01
449 359 0.05
450 76 0.01
451 7 0.00
452 3 0.00
453 132 0.02
454 36 0.01
455 30 0.00
457 1 0.00
458 3 0.00
459 4 0.00
460 1 0.00
461 1 0.00
462 1 0.00
464 4 0.00
465 4 0.00
466 2 0.00
467 109 0.02
468 435 0.06
469 260 0.04
470 9 0.00
471 181 0.03
472 282 0.04
473 720 0.10
474 685 0.10
475 1475 0.21
476 1545 0.22
477 416 0.06
478 5 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (476 bp):
ATAGTCTTTTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC
CAATTTTTGTAGAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTT
ATTCATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTT
TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
GACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAAGCACATTCCC
TTCATTCGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCGTTTTT
GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
TCAGGATTAGGCACCATAAAC
Found at i:269302 original size:20 final size:20
Alignment explanation
Indices: 269257--269308 Score: 79
Period size: 19 Copynumber: 2.6 Consensus size: 20
269247 GTAGCCAAAC
**
269257 TTGTATCGATACACAAAGTA
1 TTGTATCGATACACAAAAAA
269277 -TGTATCGATACACAAAAAA
1 TTGTATCGATACACAAAAAA
269296 TTGTATCGATACA
1 TTGTATCGATACA
269309 TTGGCTTGTA
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
19 17 0.59
20 12 0.41
ACGTcount: A:0.42, C:0.15, G:0.13, T:0.29
Consensus pattern (20 bp):
TTGTATCGATACACAAAAAA
Found at i:275052 original size:13 final size:13
Alignment explanation
Indices: 275036--275067 Score: 64
Period size: 13 Copynumber: 2.5 Consensus size: 13
275026 TCTTTGTACT
275036 GATACATTGTATC
1 GATACATTGTATC
275049 GATACATTGTATC
1 GATACATTGTATC
275062 GATACA
1 GATACA
275068 GGGGGATTAT
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 19 1.00
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Consensus pattern (13 bp):
GATACATTGTATC
Found at i:275233 original size:20 final size:19
Alignment explanation
Indices: 275192--275234 Score: 52
Period size: 20 Copynumber: 2.2 Consensus size: 19
275182 ATCTTTTACA
275192 AAATACTTGTTTTTCACTTC
1 AAATACTTGTTTTTCAC-TC
275212 AAATCACTTCGTTTTTCA-TC
1 AAAT-ACTT-GTTTTTCACTC
275232 AAA
1 AAA
275235 ACCAGCATCA
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
20 9 0.43
21 4 0.19
22 8 0.38
ACGTcount: A:0.30, C:0.21, G:0.05, T:0.44
Consensus pattern (19 bp):
AAATACTTGTTTTTCACTC
Found at i:276706 original size:13 final size:13
Alignment explanation
Indices: 276688--276713 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
276678 TACACAAAGT
276688 ATGTATCGATACA
1 ATGTATCGATACA
276701 ATGTATCGATACA
1 ATGTATCGATACA
276714 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:276711 original size:32 final size:33
Alignment explanation
Indices: 276670--276733 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 33
276660 TAGCCAATCT
**
276670 TGTATCGATACACAAAGTA-TGTATCGATACAA
1 TGTATCGATACACAAAAAATTGTATCGATACAA
276702 TGTATCGATACACAAAAAATTGTATCGATACA
1 TGTATCGATACACAAAAAATTGTATCGATACA
276734 TTGGCTTGTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 17 0.59
33 12 0.41
ACGTcount: A:0.42, C:0.16, G:0.14, T:0.28
Consensus pattern (33 bp):
TGTATCGATACACAAAAAATTGTATCGATACAA
Found at i:278426 original size:476 final size:473
Alignment explanation
Indices: 277467--278567 Score: 1345
Period size: 476 Copynumber: 2.3 Consensus size: 473
277457 TAAGCTTTCA
* * * * *
277467 TTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCAT-CCTTTAA-AACAAGCATCTATTCTCCT
1 TTTTATTTGCCCTATTTT-CTTAAAATCAAAATTCATCCCTTAAATAAGAAGCATCGATTCTCAT
* * * *
277530 AACAGTCTCCTTTCTTTTCAACATTCGGAAGCAAAAGCACATTCCCTTCATTAGGATACCTGACA
65 AACAGTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAAGATACATGACA
* * * * * * *
277595 TTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCATTTTTGATATAATCAAAGTTTGTC
130 TTGATACTTTGGGGCCACAAGAAAAGCTTTTATTTCCACCATTTTTGATAGAATCAAAGTTTGTC
* * ** * * **
277660 TCTTAAATAATACAAACATGAATAGTCGCACTAATCCTTATTCTTTTCAGGATTATGCATTATAA
195 TCTTAAATAAAACAAACATGAATAGTCACACTAATCCCCATTCTTTTCAAGATTAGGCACCATAA
** *
277725 ACATAGTCTTTTCATAAGGATACTCGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCAC
260 ACATAGTCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCAC
* * * * **
277790 CCCAACTTTTGTAAAGTCTAAGCCCGCGCCTCAAATGAGGCAAACATTGATTCTAGTAGTGATCT
325 CCAAACTTTTGTAAAGTCTAAGCCCGCGCCTCAAATGAGACAAAAATGGATTCTAGTAACGATCT
** *
277855 TTGTTCATTTTGTGATTAGACACTATAAACACTTTCTACTAATTAGGATAAATGATATTGATGAT
390 TTGTTCATTTCATGATTAGACACTATAAACACTTTCTACTAATTAGGAGAAATGATATTGATGAT
*
277920 TTTCTTTTGCATGGAAATC
455 TTTCTTTTCCATGGAAATC
* * * * *
277939 ATTTATTTGCCCTATTTTCAATAAAATCAAAATTTATCCCCTCAATAAGATAGGCATCGATTCTC
1 TTTTATTTGCCCTATTTTC-TTAAAATCAAAATTCATCCCTTAAATAAGA-A-GCATCGATTCTC
* * * *
278004 GTAACAGTTTCCATTT-TTTTCAAGATTGGGAATG-AAGAA-CACATTCCAGTT-ATTAAGATAG
63 ATAACAGTCTCC-TTTCTTTTCAAGATTGGGAA-GCAA-AAGCACATTCC-CTTCATTAAGATAC
* *
278065 ATGACATTGATACTTTGGGGCCACAAGAAAATCTTTTATTTCCACCATTTTTGATAGAGTCAAAG
124 ATGACATTGATACTTTGGGGCCACAAGAAAAGCTTTTATTTCCACCATTTTTGATAGAATCAAAG
* * *
278130 TTTGTCTCTTAAATAAAACAAACGTGAATAGTCATACTAATCCCCATTTTTTTCAAGATTAGGCA
189 TTTGTCTCTTAAATAAAACAAACATGAATAGTCACACTAATCCCCATTCTTTTCAAGATTAGGCA
* * *
278195 CCATAAACATAGTCTTTTCATAAGGATACAAGATAATGTTGCTTTGGTTTCGCAAGAAATGCTTT
254 CCATAAACATAGTCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCACAAGAAAGGCTTT
* * ** *
278260 CTTC-CCCTAAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAAAATGGATTCTAGTA
319 CTTCACCC-AAACTTTTGTAAAGTCTAAGCCCGCGCCTCAAATGAGACAAAAATGGATTCTAGTA
* * * *
278324 ACGATCTTTGTTGATTTCATGATTAGACACTATAAACACTTTTTCCTCATTAGGAGAAATGATAT
383 ACGATCTTTGTTCATTTCATGATTAGACACTATAAACACTTTCTACTAATTAGGAGAAATGATAT
* *
278389 TGTTGATTTTCTTTTCCTTGGAAATC
448 TGATGATTTTCTTTTCCATGGAAATC
*
278415 TTTTTTTTGCCCTATTTTTCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TCGATTCTC
1 TTTTATTTGCCCTA-TTTTCTTAAAATCAAAATTCATCCCTTAAATAAG--AAGCATCGATTCTC
* * * * * ** *
278479 ATAACTGTCTCCTTTCGTTTCATGATTGGGAAGCAAAGGCACATTCCCTTCAATCGGATACATGG
63 ATAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAAGATACATGA
* * *
278544 CATTGATGCTTTGGTGTCACAAGA
128 CATTGATACTTTGGGGCCACAAGA
278568 CAAACTTAAA
Statistics
Matches: 528, Mismatches: 84, Indels: 31
0.82 0.13 0.05
Matches are distributed among these distances:
471 1 0.00
472 31 0.06
473 5 0.01
474 10 0.02
475 76 0.14
476 390 0.74
477 14 0.03
478 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (473 bp):
TTTTATTTGCCCTATTTTCTTAAAATCAAAATTCATCCCTTAAATAAGAAGCATCGATTCTCATA
ACAGTCTCCTTTCTTTTCAAGATTGGGAAGCAAAAGCACATTCCCTTCATTAAGATACATGACAT
TGATACTTTGGGGCCACAAGAAAAGCTTTTATTTCCACCATTTTTGATAGAATCAAAGTTTGTCT
CTTAAATAAAACAAACATGAATAGTCACACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAA
CATAGTCTTTTCATAAGGATACAAGATAATGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCACC
CAAACTTTTGTAAAGTCTAAGCCCGCGCCTCAAATGAGACAAAAATGGATTCTAGTAACGATCTT
TGTTCATTTCATGATTAGACACTATAAACACTTTCTACTAATTAGGAGAAATGATATTGATGATT
TTCTTTTCCATGGAAATC
Found at i:280731 original size:475 final size:476
Alignment explanation
Indices: 278564--284163 Score: 6410
Period size: 475 Copynumber: 11.8 Consensus size: 476
278554 TTGGTGTCAC
* * *
278564 AAGACAAACTTAAATAGTCATACTAATCCCTATTCTCTTT-AGGATTAGGCACCATAAACATAGT
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCT-TTTCAGGATTAGGCACCATAAACATAGT
** * * * * *
278628 CTTTTCATAAGGATACAAGATATTAACGTTTTGGTTTCGCAAGAAAGGTTTTCTTCTCCCAAATT
65 CTTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATT
* * * * * *
278693 TTTGTAAAGTCTAAGATCATACCTCAAATGAGACAAACATGGATTCTAGTACTCATCTTCATTCA
130 TTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* * * * *
278758 TTTTGT-AGTTAGGCACTATAAGCACGTTCTCCTCATTAGGATAAATTACATTGATGATTTTTTT
195 TTTTGTGA-TTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
* * * ** *
278822 TTGCATGCAAATCTTTTCTTTTCCCTAATTTCCTTAAAATTGAAATTCATCCCTTAAATATGACA
259 TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACA
* ** * * *
278887 AGCATTGATTCTCATAACAGTCT-CATTTCTTTTCAAGATTCAGTAGCAA-AAGCACATTCCCTT
324 AGCATCGATTCTCATAACAGTCTCCATTT-TTTTCAAGATTGGGAACCAAGAA-CACATTCCATT
* * * * * * * *
278950 CATTTGGATACCTGACATTGATGTTTTGGTGTCGCGAGAAAAG-TTTTTTTTCTACCATTTTGGA
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
279014 TAGAATCAAAGTTTGTCTCTTAAAT
452 TAGAATCAAAGTTTGTCTCTTAAAT
* * *
279039 AAGACAAACATGAATAGTAATACTAATCCCCATTCTTTTCAGGATTAGGCACCACAAACATAGTA
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * ** *
279104 TTTTCATAAGGATACTCAATATTGGCGTTTTGGTTTCGCAAGAAACACTTTTTTCCCCCCAATTT
66 TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTT
* * ***
279169 TTATAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCGAGTAATGATCTTTGGTCAT
131 TTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
* * * * *
279234 TTTGTGATTA-G-ACAATAAACACTTTCTCCTCACTAGCATAAATGATATTGTTGGTTTTCTTTT
196 TTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* * *
279297 GCTTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATGCATCCCTTCAATAAGACAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAG
* * * * * * *
279362 CATCGATTCTCGTAACAGTCTCCATTCTTTCCAAGATTAGGAGCCAAGAACACGTCCCCATT-AT
326 CATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACAT-TCCATTCAT
* * * * *
279426 TAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTATTTTCACCGTTTTTGGTAG
390 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAG
*
279491 AATCAAAGTTTATCTCTTAAAT
455 AATCAAAGTTTGTCTCTTAAAT
* * * *
279513 AAGACAAACATGAACT-GT-AGCACTAATCCTCATTCTTTTTAGGATTAGGCACCATAAACATGG
1 AAGACAAACATGAA-TAGTCA-TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
* * * * *
279576 TATGTTCATAAGGATACAT-GATATTGACGCTTTGGTTTCGTAAAAAAGGTTTTCTTCCCCCCAA
64 TCTTTTCATAAGGATAC-TCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAA
* * * * **
279640 -TATTCTAGAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCAAGTAATGATCTTCGCT
128 TTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATT
* *
279704 CATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGTTGATTTTCT
193 CATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCT
* * *
279769 TTTGCTTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAACAAAATTCATCCCTTAAATAAGAT
258 TTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGAC
* * * *
279834 AAGC-TCGATTCTCGTAACAGTCTCC-TTTCTTTTCAAGATTGGGAAGCGAAG-GCACATTCCCT
323 AAGCATCGATTCTCATAACAGTCTCCATTT-TTTTCAAGATTGGGAA-CCAAGAACACATTCCAT
* * * * * *
279896 TCATTTGGATACATGGCATTGATGCTTTGGTGTTGCAGGAAAAGGTTTTCTTTTCACCGTTTTTG
386 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTG
279961 ATAGAATCAAAGTTTGTCTCTTAAAT
451 ATAGAATCAAAGTTTGTCTCTTAAAT
* ** * *
279987 AAGATAAACATGAATAGT-ATACTAATCCCCATTCTTTTCAATATTAGTCACCATAAACGTAGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * *
280051 TTTTCATAAGAATACAT-GATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTT-CCCCCAATT
66 TTTTCATAAGGATAC-TCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATT
** * * ** * * * *
280114 TTCATAGAGTCTAAGTTTGTGCCTCAAATGGGACGGACATGGGTTCTAGCAATGGTCTTTGA-TC
130 TTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC-TTCATTC
* * * *
280178 ATCTTGTGATT-GGACACTATAAACACTTTCTCCTCATTAGCATAAATGATATTCATGACTTTCT
194 ATTTTGTGATTAGG-CACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCT
* * * * *
280242 TTTGCATCGAAATCTTTTCTTTGCCCTATTTTGCTTAAAAACAAAATTCATCCATTCAATAAGAC
258 TTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGAC
* * * *
280307 AAGCATCGATTCTCGTAACCGTCTCCATTTTTTTCAGGATTGGGAACCAAGAACACATTCTCGTT
323 AAGCATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTC-CATT
* * * ** * *
280372 -ATTAGGATACATGACATCGATGTTTTGGTGTCGGAAGAATTGCTTTTATTTCCATCGTTTTTGA
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
280436 TAGAATCAAAGTTTGTCTCTTAAAT
452 TAGAATCAAAGTTTGTCTCTTAAAT
* * * ** * * *
280461 AGGACAAACATGAAAAGTCATACCAATCCTTATTTTTTTCAGGACTAGGCACCATAAACGTAGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * * *
280526 TTTTCATAAAGATACTCGATATTGATGGTTTGGTTTCGCAAGGAAGGCTTTCCTCCCCCCAATTT
66 TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTT
* * ** *
280591 TTGTGGAGTCTAAGATCGCACCTCAATTGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
131 TTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
* * ** * *
280656 TTTGTGGTTACGCACTATAAA-ACAATCTCCTCGTTAGGATAAATGATATTGATAATTTTCTTTT
196 TTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* **
280720 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATTCCTTCGATAAGACAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAG
* ** * ** *
280785 CAACGATTCTCATAACAGTCTTTATTCTTTTCAAGATTGAAAACCAAGAACACATTCCTATT-GT
326 CATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCC-ATTCAT
* * * *
280849 TAGGATACAAGACATTAATGCTTTGGAGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATAG
390 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAG
280914 AATCAAAGTTTGTCTCTTAAAT
455 AATCAAAGTTTGTCTCTTAAAT
** * *
280936 AAGGGAAATATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATGGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * * * * *
281001 TTTTCATAAGGATACACGATATTGATGCTTTGGCTTCGTATGAAAGGCTTTCTTGCCACCAATTT
66 TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTT
* *** * * *
281066 TTGTAAAGTCTAAGTAAATGCCTCAAATGAGGCAAACGTGGATTCTAGTAATGATCTTCTTTCAT
131 TTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
* * * * * * * *
281131 TTTTTGATTAGGCATTGTAAACACATTCTCCTCTTTAAGATTAATGATATTCATGATTTTCTTTT
196 TTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* * * * *
281196 GCATTG-AA--TTTT-TTTGCCCTGTTTTCCTTAATATCAAAATTCCA-CCCGTAAATATGACAA
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATT-CATCCCTTAAATAAGACAA
* * * * *
281256 GCATCGATTCTCATAACAGTCACCATTCTTTTCAAGTTTGGGAAGCAA-AAGCATATTCTC-TTC
325 GCATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAA-CACATTC-CATTC
* * * * *** *
281319 ATTACGATACAAGACATTGATGCATTGGTGTCACAAGAAAAGCTTTTCTTTTGGCCATTTTTGAT
388 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
*
281384 AGAATCAAAGTTTGTATCTTAAAT
453 AGAATCAAAGTTTGTCTCTTAAAT
* * * * * * *
281408 ATGACAAACAAGAATAGTCATGCAAATCCCCATTGTTTTTAGGATTAGGCACCATGAACATAGT-
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * * * *
281472 TTTCTCATGAGGATACACGA-AGTGGATGCTTTGGTTTCGCAGGAAAGGCTTTCTT-CCACCAAT
66 TTT-TCATAAGGATACTCGATA-TTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAAT
* * *
281535 TTTTGT-GAAGTTTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAATGATGTTCATT
129 TTTTGTAG-AGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATT
* * * *
281599 CATTTTGTGATTAGGCACTATAAACGCATTCT-CTCCATTAAGATAAATGATAATGATGATTTTC
193 CATTTTGTGATTAGGCACTATAAACACTTTCTCCT-CATTAGGATAAATGATATTGATGATTTTC
* *
281663 TTTTG-AGTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATAAAAATTCATCTCTTAAATAAG
257 TTTTGCA-TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAG
* * * * * * *
281727 ACAAGCATCGATTCTCATAATAGTCTCTATTCTTTTCAGGATTAGGAAGCGAAG-GCACATTCTC
321 ACAAGCATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAA-CCAAGAACACATTC-C
* ** * * ** *
281791 -TTCATTCA-GATACAT-ACATTGGTGCTTTGGTGTCTTAAGAAAACCTTTTATTTTTACTGTTT
384 ATTCATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTT
*
281853 TTGATAGAATCAAAGTTTATCTCTTAAAT
448 TTGATAGAATCAAAGTTTGTCTCTTAAAT
* * *
281882 AAGACAAACATAAATAGTCCTACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* *** * *
281947 TTTTCATATGGATACAT-GATAACAACGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCCCTTAAT
66 TTTTCATAAGGATAC-TCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC-CAAT
* * * *
282011 TTTTGTAGAGTCTAAGATCGTACCTAAAATGAGACTAACATGGATTCTAGTAATGATCTTCATTT
129 TTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCA-TT
* * *
282076 C-TTTTATGGTTAGGCACTACAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCT
193 CATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCT
* * * * *
282140 TCTGCACGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTTATCCCTTAAATAAGAG
258 TTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGAC
* * * * * * * *
282205 AGGC-TTGATTCTCGTAACAATCTCC-TTTCTTTTCAAGATTAGGAAGCAAAGGA-ACTTTCCAT
323 AAGCATCGATTCTCATAACAGTCTCCATTT-TTTTCAAGATTGGGAA-CCAAGAACACATTCCAT
* * * ** * * * *
282267 TCATTAGGGTACACGACAATGGCGCTTTGGTGTCGCAAAAAAAGGTTTTCTTTCCATCGTTTTTT
386 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTG
282332 ATAGAATCAAAGTTTGTCTCTTAAAT
451 ATAGAATCAAAGTTTGTCTCTTAAAT
* * * *
282358 AAGATAAACATAAATTGTCATACTAATCCCCATTCTTTTCAGGATTATGCACCATAAACATAGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
** * * * * *
282423 TTTTCATAAGGATACAAGATATTAATGCTTTGGTTACACAAGAAAGGCTTTCTTCCCCCTAATTT
66 TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTT
* ** **
282488 TTGTAGAGTCTACGACCGTATCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
131 TTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
* * * *
282553 TTTATGGTTAGGCACTACAAACACTTTCTGCTCATTAGGATAAATGATATTGATGA-TTTCTTTT
196 TTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* *
282617 GCATGGAAATCTTATT-TTAGCCCTATTTTCCTTAAAATCAAAATTTATCCCTT--A-AA-ACAA
261 GCATGGAAATCTT-TTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAA
* *
282677 GCATCGATTCTCATGACAGTCTCC-TTTCTTTTCAAGATTGGGAAGCAA-AAGCACATTCTCA-T
325 GCATCGATTCTCATAACAGTCTCCATTT-TTTTCAAGATTGGGAACCAAGAA-CACATTC-CATT
* * * *** * *
282739 CATTAGTATACCTGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCATTATTATTAA
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
282804 TAGAATCAAAGTTTGTCTCTTAAAT
452 TAGAATCAAAGTTTGTCTCTTAAAT
* * * * *
282829 AAGACAAACATGAGTAGTCATACTAATCCCCTTTCTTTTTACGATTAGGCACTATAAACATAGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* ** *
282894 TTTTCATAAGGATACTCGATATTGATGCTTTACTTTTGCAAGAAAGGCTTTC-TCCCCCCTAATT
66 TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCC-AATT
* * * **
282958 TTCGTAGAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAGTGATCTTTGTTCA
130 TTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* *
283023 TTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTT-TCC
195 TTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCT-T
* *** * * * * *
283087 TTGCGTGGAAATCTTTTCTTTGTAGTATTTTCCATAAAATCAAAATTTAGCCCTTCAATAAGATA
259 TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACA
* * * * * * *
283152 AGCATCAATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAGGAACTAAGAACACGTTCCCGTT-
324 AGCATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATT-CCATTC
* * *
283216 ATTAGGATACATGACATTGATGCTTCGGTGTCGTAAGAAAAGCTTTTCCTTT-CACCATTTTTGA
388 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTT-CTTTCCACCGTTTTTGA
*
283280 TAGAATCAAAGTTTGTCTCATAAAT
452 TAGAATCAAAGTTTGTCTCTTAAAT
* * **
283305 AAGGCAAACATGAATTGTCGCACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* ** * * **
283370 TTTTCACAAGGATACAAGATATTTACGCTTTGGTTTCGCAAGAAAGAC-TTCTTTCCGTCCAATT
66 TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTC-TTCCCCCCAATT
* * ** * * **
283434 TTTATAAAGTCTAAGTTTATGCCTTAAATGAGACAAACATGGATTCTAGTAGTGATCTTTGTTCA
130 TTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* *
283499 TTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGAATAAATGATATTGATGATTTTCTTT
195 TTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * *
283564 TGAATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATAAAAATTCATCCCTTAAATAAGACAA
260 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAA
* * * * * * *
283629 GCATCGATTCTCATAATAGTTTCC-TTTCTTTTCATGATTGGGAAGCAAAAACGCATTCCCTTCA
325 GCATCGATTCTCATAACAGTCTCCATTT-TTTTCAAGATTGGGAACCAAGAACACATTCCATTCA
* * * **
283693 TTAGGATACTTGACATTGAAGCTTTGGTGTCGCAAGAAAAGGTTTT-TTTCCACTATTTTTGATA
389 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATA
* *
283757 GAATCAGAGTTTATCTCTTAAAT
454 GAATCAAAGTTTGTCTCTTAAAT
* * * * ** * *
283780 AAGACAAACATTAATAGTCCTATTAATCCCCATTATTTTCACAATTGGGCACTATAAACATAGTC
1 AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
** * * * **
283845 TTTTTGTAAAGATACTCGATATTGACACTTTGGTTTCACAAGAAAGGCTTTCTTCCCCGTAATTT
66 TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTT
* * * *
283910 TTGTACATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTTCTAGTAATGATCTT-AGTTT
131 TTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA-TTCTAGTAATGATCTTCA-TTC
* * * * * **
283974 ATTTTGTGGTTAGACATTATAAACATTTTTTCCTCATTAGGATAAATGATATTGACAATTTTCTT
194 ATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
* * * *
284039 TTGCATGAAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTTAATATGACA
259 TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACA
* *
284104 AACATCGATTCTCGTAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCC
324 AGCATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCC
284164 TGTTGTCGCA
Statistics
Matches: 4362, Mismatches: 673, Indels: 179
0.84 0.13 0.03
Matches are distributed among these distances:
469 1 0.00
470 15 0.00
471 465 0.11
472 319 0.07
473 515 0.12
474 659 0.15
475 1240 0.28
476 1121 0.26
477 27 0.01
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (476 bp):
AAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
TTTTCATAAGGATACTCGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCCAATTT
TTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
TTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAG
CATCGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCCATTCATT
AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGA
ATCAAAGTTTGTCTCTTAAAT
Found at i:281646 original size:947 final size:948
Alignment explanation
Indices: 278564--284163 Score: 6484
Period size: 947 Copynumber: 5.9 Consensus size: 948
278554 TTGGTGTCAC
* * * * *
278564 AAGACAAACTTAAATAGTCATACTAATCCCTATTCTCTTTAGGATTAGGCACCATAAACATAGTC
1 AAGACAAACATGAATAGTCATACAAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTC
* * * *
278629 TTTTCATAAGGATACAAGATATTAACGTTTTGGTTTCGCAAGAAAGGTTTTCTTCTCCCAAATTT
66 TTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTC-CCCCAATTT
* * *
278694 TTGTAAAGTCTAAGATCATACCTCAAATGAGACAAACATGGATTCTAGTACTCATCTTCATTCAT
130 TTGT-AAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
* * * * *
278759 TTTGT-AGTTAGGCACTATAAGCACGTTCTCCTCATTAGGATAAATTACATTGATGATTTTTTTT
194 TTTGTGA-TTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * ** *
278823 TGCATGCAAATCTTTTCTTTTCCCTAATTTCCTTAAAATTGAAATTCATCCCTTAAATATGACAA
258 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAA
* * * *
278888 GCATTGATTCTCATAACAGTCTCATTTCTTTTCAAGATT-CAGTAGCAA-AAGCACATTCCCTTC
323 GCATCGATTCTCATAACAGTCTC-TTTCTTTTCAAGATTGGA-AACCAAGAA-CACATTCCCTTC
* * * * * * *
278951 ATTTGGATACCTGACATTGATGTTTTGGTGTCGCGAGAAAA-GTTTTTTTTCTACCATTTTGGAT
385 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCATTTTTGAT
*
279015 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTAATACTAATCCCCATTCTTTTCA
450 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA
* * * * * * *
279080 GGATTAGGCACCACAAACATAGTATTTTCATAAGGATACTCAATATTGGCGTTTTGGTTTCGCAA
515 AGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAA
** * * *
279145 GAAACACTTTTTTCCCCCCAATTTTTATAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
580 GAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * *
279210 ATTCGAGTAATGATCTTTGGTCATTTTGTGATTAGACA--ATAAACACTTTCTCCTCACT-AGCA
645 ATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAAG-A
* *
279272 TAAATGATATTGTTGGTTTTCTTTTGC-TTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC
709 TAAATGATATTGATGATTTTCTTTTGCATT-GAAA-CTTTTCTTTGCCCTATTTTCCTTAAAATC
* *
279336 AAAATGCATCCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTCCAAGATTA
772 AAAATTCATCCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTA
* * * *
279401 GG-AGCCAAGAACACGTCCCCATTATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAAAA
837 GGAAG-CAAGAACACATTCCCATTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA
* * *
279465 GCTTTTATTTTCACCGTTTTTGGTAGAATCAAAGTTTATCTCTTAAAT
901 GCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * *
279513 AAGACAAACATGAACT-GT-AGCACTAATCCTCATTCTTTTTAGGATTAGGCACCATAAACATGG
1 AAGACAAACATGAA-TAGTCA-TACAAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAG
* * * * * *
279576 TATGTTCATAAGGATACATGATATTGACGCTTTGGTTTCGTAAAAAAGGTTTTCTTCCCCCCAA-
64 TCTTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTT-CCCCCAAT
* * * * * * **
279640 TATTCTAGAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCAAGTAATGATCTTCGCTC
128 TTTTGTA-AGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTC
* *
279705 ATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGTTGATTTTCTT
192 ATTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
* * *
279770 TTGCTTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAACAAAATTCATCCCTTAAATAAGATA
257 TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACA
* * * *
279835 AGC-TCGATTCTCGTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCGAAG-GCACATTCCCTTC
322 AGCATCGATTCTCATAACAGTCT-CTTTCTTTTCAAGATT-GGAAACCAAGAACACATTCCCTTC
* * * * * * *
279898 ATTTGGATACATGGCATTGATGCTTTGGTGTTGCAGGAAAAGGTTTTCTTTTCACCGTTTTTGAT
385 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCATTTTTGAT
*
279963 AGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATAGT-ATACTAATCCCCATTCTTTTCA
450 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA
* * * * * * *
280027 ATATTAGTCACCATAAACGTAGTCTTTTCATAAGAATACATGATATTGATGCTTTGGTTTCGTAA
515 AGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAA
** * * **
280092 GAAAGGCTTTCTTCCCCC-AATTTTCATAGAGTCTAAGTTTGTGCCTCAAATGGGACGGACATGG
580 GAAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * * *
280156 GTTCTAGCAATGGTCTTTGATCATCTTGTGATTGGACACTATAAACACTTTCTCCTCATT-AGCA
645 ATTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAAG-A
* * * * *
280220 TAAATGATATTCATGACTTTCTTTTGCATCGAAATCTTTTCTTTGCCCTATTTTGCTTAAAAACA
709 TAAATGATATTGATGATTTTCTTTTGCATTGAAA-CTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * * * *
280285 AAATTCATCCATTCAATAAGACAAGCATCGATTCTCGTAACCGTCTCCATTTTTTTCAGGATTGG
773 AAATTCATCCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAG
* * * * * * **
280350 GAACCAAGAACACATTCTCGTTATTAGGATACATGACATCGATGTTTTGGTGTCGGAAGAATTGC
838 GAAGCAAGAACACATTCCCATTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
* * *
280415 TTTTATTTCCATCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
903 TTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * ** * *
280461 AGGACAAACATGAAAAGTCATACCAATCCTTATT-TTTTTCAGGACTAGGCACCATAAACGTAGT
1 AAGACAAACATGAATAGTCATACAAATCCCCATTCTTTTT-AGGATTAGGCACCATAAACATAGT
* ** * * * *
280525 CTTTTCATAAAGATACTCGATATTGATGGTTTGGTTTCGCAAGGAAGGCTTTCCTCCCCCCAATT
65 CTTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTT-CTTCCCCCAATT
* * *
280590 TTTGTGGAGTCTAAGATCGCACCTCAATTGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
129 TTTGT-AAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* * ** * *
280655 TTTTGTGGTTACGCACTATAAA-ACAATCTCCTCGTTAGGATAAATGATATTGATAATTTTCTTT
193 TTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* **
280719 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATTCCTTCGATAAGACAA
258 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAA
* * * **
280784 GCAACGATTCTCATAACAGTCTTTATTCTTTTCAAGATTGAAAACCAAGAACACATT-CCTATTG
323 GCATCGATTCTCATAACAGTCTCT-TTCTTTTCAAGATTGGAAACCAAGAACACATTCCCT-TCA
* * * * *
280848 TTAGGATACAAGACATTAATGCTTTGGAGTCGCAAGAAAAGCTTTTATTTCCACCGTTTTTGATA
386 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCATTTTTGATA
** * *
280913 GAATCAAAGTTTGTCTCTTAAATAAGGGAAATATGAATAGTCATACTAATCCCCATTCTTTTCAG
451 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAA
* * * * *
280978 GATTAGGCACCATAAACATGGTCTTTTCATAAGGATACACGATATTGATGCTTTGGCTTCGTATG
516 GATTAGGCACCATAAACATAGTCTTTTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAG
* * *** * *
281043 AAAGGCTTTCTTGCCACC-AATTTTTGTAAAGTCTAAGTAAATGCCTCAAATGAGGCAAACGTGG
581 AAAGGCTTTCTT-CCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * * *
281107 ATTCTAGTAATGATCTTCT-TTCATTTTTTGATTAGGCATTGTAAACACATTCTCCTCTTTAAGA
645 ATTCTAGTAATGATCTT-TGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAAGA
* * * *
281171 TTAATGATATTCATGATTTTCTTTTGCATTG-AA-TTTT-TTTGCCCTGTTTTCCTTAATATCAA
709 TAAATGATATTGATGATTTTCTTTTGCATTGAAACTTTTCTTTGCCCTATTTTCCTTAAAATCAA
* * * * * * *
281233 AATTCCA-CCCGTAAATATGACAAGCATCGATTCTCATAACAGTCACCATTCTTTTCAAGTTTGG
774 AATT-CATCCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAG
* * * * * *
281297 GAAGCAA-AAGCATATTCTC-TTCATTACGATACAAGACATTGATGCATTGGTGTCACAAGAAAA
838 GAAGCAAGAA-CACATTCCCATT-ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA
** * *
281360 GCTTTTCTTTTGGCCATTTTTGATAGAATCAAAGTTTGTATCTTAAAT
901 GCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * * *
281408 ATGACAAACAAGAATAGTCATGCAAATCCCCATTGTTTTTAGGATTAGGCACCATGAACATAGT-
1 AAGACAAACATGAATAGTCATACAAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTC
* * * * * *
281472 TTTCTCATGAGGATACACGA-AGTGGATGCTTTGGTTTCGCAGGAAAGGCTTTCTTCCACCAATT
66 TTT-TCATAAGGATACAAGATA-TTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCAATT
* * * * *
281536 TTTGTGAAGTTTAAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAATGATGTTCATTCA
129 TTTGT-AAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* * * *
281601 TTTTGTGATTAGGCACTATAAACGCATTCT-CTCCATTAAGATAAATGATAATGATGATTTTCTT
193 TTTTGTGATTAGGCACTATAAACACTTTCTCCT-CATTAGGATAAATGATATTGATGATTTTCTT
* *
281665 TTG-AGTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATAAAAATTCATCTCTTAAATAAGAC
257 TTGCA-TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGAC
* * * * * *
281729 AAGCATCGATTCTCATAATAGTCTCTATTCTTTTCAGGATTAGGAAGCGAAG-GCACATTCTCTT
321 AAGCATCGATTCTCATAACAGTCTCT-TTCTTTTCAAGATT-GGAAACCAAGAACACATTCCCTT
* ** ** ** **
281793 CATTCA-GATACAT-ACATTGGTGCTTTGGTGTCTTAAGAAAACCTTTTATTTTTACTGTTTTTG
384 CATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCATTTTTG
* * *
281856 ATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATAAATAGTCCTACTAATCCCCATTCTTTT
448 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* * *** *
281921 CAAGATTAGGCACCATAAACATAGTCTTTTCATATGGATACATGATAACAACGCTTTGGTTTTGC
513 CAAGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACACGATATTGACGCTTTGGTTTCGC
* * * *
281986 AAGAAAGGCTTTCTTCCCCCTTAATTTTTGTAGAGTCTAAGATCGTACCTAAAATGAGACTAACA
578 AAGAAAGGCTTTCTTCCCCC-TAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
* * * *
282051 TGGATTCTAGTAATGATCTTCAT-TTC-TTTTATGGTTAGGCACTACAAACACTTTCTCCTCATT
642 TGGATTCTAGTAATGATCTT--TGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATT
* * *
282114 AGGATAAATGATATTGATGATTTTCTTCTGCA-CGAAAATCTTTTCTTTGCCCTATTTTCCTTAA
705 AAGATAAATGATATTGATGATTTTCTTTTGCATTG-AAA-CTTTTCTTTGCCCTATTTTCCTTAA
* * * * * * *
282178 AATCAAAATTTATCCCTTAAATAAGAGAGGC-TTGATTCTCGTAACAATCTCCTTTCTTTTCAAG
768 AATCAAAATTCATCCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAG
* * * * * **
282242 ATTAGGAAGCAAAGGA-AC-TTTCCATTCATTAGGGTACACGACAATGGCGCTTTGGTGTCGCAA
833 ATTAGGAAGC-AAGAACACATTCCCATT-ATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * * *
282305 AAAAAGGTTTTCTTTCCATCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAAT
896 GAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * * * * *
282358 AAGATAAACATAAATTGTCATACTAATCCCCATTCTTTTCAGGATTATGCACCATAAACATAGTC
1 AAGACAAACATGAATAGTCATACAAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTC
* * * *
282423 TTTTCATAAGGATACAAGATATTAATGCTTTGGTTACACAAGAAAGGCTTTCTTCCCCCTAATTT
66 TTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCC-AATTT
* * *
282488 TTGTAGAGTCTACGACCGTATCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
130 TTGTA-AGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
* * * *
282553 TTTATGGTTAGGCACTACAAACACTTTCTGCTCATTAGGATAAATGATATTGATGA-TTTCTTTT
194 TTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* *
282617 GCATGGAAATCTTATT-TTAGCCCTATTTTCCTTAAAATCAAAATTTATCCCTT--A-AA-ACAA
259 GCATGGAAATCTT-TTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAA
* * * * *
282677 GCATCGATTCTCATGACAGTCTCCTTTCTTTTCAAGATTGGGAAGCAA-AAGCACATTCTCATCA
323 GCATCGATTCTCATAACAGTCT-CTTTCTTTTCAAGATTGGAAACCAAGAA-CACATTCCCTTCA
* * * ** * *
282741 TTAGTATACCTGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCATTATTATTAATA
386 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCATTTTTGATA
* * * *
282806 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCCCCTTTCTTTTTAC
451 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAA
* * * ** *
282871 GATTAGGCACTATAAACATAGTCTTTTCATAAGGATACTCGATATTGATGCTTTACTTTTGCAAG
516 GATTAGGCACCATAAACATAGTCTTTTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAG
* * *
282936 AAAGGCTTTCTCCCCCCTAATTTTCGTAGAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGA
581 AAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* *
283001 TTCTAGTAGTGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGGATA
646 TTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAAGATA
* * * *** *
283066 AATGATATTGATGATTTT-TCCTTGCGTGGAAATCTTTTCTTTGTAGTATTTTCCATAAAATCAA
711 AATGATATTGATGATTTTCT-TTTGCATTGAAA-CTTTTCTTTGCCCTATTTTCCTTAAAATCAA
* * * *
283130 AATTTAGCCCTTCAATAAGATAAGCATCAATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAGG
774 AATTCATCCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAGG
* * * *
283195 AA-CTAAGAACACGTTCCCGTTATTAGGATACATGACATTGATGCTTCGGTGTCGTAAGAAAAGC
839 AAGC-AAGAACACATTCCCATTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
* * *
283259 TTTTCCTTTCACCATTTTTGATAGAATCAAAGTTTGTCTCATAAAT
903 TTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
* * ** * *
283305 AAGGCAAACATGAATTGTCGCACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
1 AAGACAAACATGAATAGTCATACAAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTC
* * * *
283370 TTTTCACAAGGATACAAGATATTTACGCTTTGGTTTCGCAAGAAAGAC-TTCTTTCCGTCCAATT
66 TTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTC-TTCC-CCCAATT
* * ** * * * **
283434 TTTATAAAGTCTAAGTTTATGCCTTAAATGAGACAAACATGGATTCTAGTAGTGATCTTTGTTCA
129 TTTGT-AAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* *
283499 TTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAGAATAAATGATATTGATGATTTTCTTT
193 TTTTGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * *
283564 TGAATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATAAAAATTCATCCCTTAAATAAGACAA
258 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAA
* * * * * * *
283629 GCATCGATTCTCATAATAGTTTCCTTTCTTTTCATGATTGGGAAGCAAAAACGCATTCCCTTCAT
323 GCATCGATTCTCATAACAGTCT-CTTTCTTTTCAAGATTGGAAACCAAGAACACATTCCCTTCAT
* * *
283694 TAGGATACTTGACATTGAAGCTTTGGTGTCGCAAGAAAAGGTTTT-TTTCCACTATTTTTGATAG
387 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCATTTTTGATAG
* * * * * *
283758 AATCAGAGTTTATCTCTTAAATAAGACAAACATTAATAGTCCTATTAATCCCCATTATTTTCACA
452 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-A
* * ** * * * *
283823 -ATTGGGCACTATAAACATAGTCTTTTTGTAAAGATACTCGATATTGACACTTTGGTTTCACAAG
516 GATTAGGCACCATAAACATAGTCTTTTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAG
* * * *
283887 AAAGGCTTTCTTCCCCGTAATTTTTGTACATTCTAAGTTCATGCCTCAAATGAGACAAACATGGA
581 AAAGGCTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * * * * *
283952 TTTCTAGTAATGATCTTAGTTTATTTTGTGGTTAGACATTATAAACATTTTTTCCTCATTAGGAT
646 -TTCTAGTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAAGAT
** *
284017 AAATGATATTGACAATTTTCTTTTGCA-TGAAAATATTTTCTTTGCCCTATTTTCCTTAAAATCA
710 AAATGATATTGATGATTTTCTTTTGCATTG-AAA-CTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * * * *
284081 AAATTCATCCCTTTAATATGACAAACATCGATTCTCGTAACAGTCTCCATTTTTTTCAAGATTGG
773 AAATTCATCCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAG
*
284146 GAACCAAGAACACATTCC
838 GAAGCAAGAACACATTCC
284164 TGTTGTCGCA
Statistics
Matches: 3943, Mismatches: 622, Indels: 169
0.83 0.13 0.04
Matches are distributed among these distances:
944 1 0.00
945 14 0.00
946 572 0.15
947 1172 0.30
948 755 0.19
949 320 0.08
950 365 0.09
951 455 0.12
952 285 0.07
953 4 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (948 bp):
AAGACAAACATGAATAGTCATACAAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTC
TTTTCATAAGGATACAAGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCCCAATTTT
TGTAAGTCTAAGATCGTACCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTT
TGTGATTAGGCACTATAAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGCA
TCGATTCTCATAACAGTCTCTTTCTTTTCAAGATTGGAAACCAAGAACACATTCCCTTCATTAGG
ATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTATTTCCACCATTTTTGATAGAATC
AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAAGATTA
GGCACCATAAACATAGTCTTTTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAGG
CTTTCTTCCCCCTAATTTTTGTAGAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
GTAATGATCTTTGTTCATTTTGTGATTAGACACTATAAACACTTTCTCCTCATTAAGATAAATGA
TATTGATGATTTTCTTTTGCATTGAAACTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCAT
CCCTTCAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAGGAAGCAAG
AACACATTCCCATTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
TCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
Found at i:285694 original size:10 final size:11
Alignment explanation
Indices: 285672--285700 Score: 51
Period size: 10 Copynumber: 2.7 Consensus size: 11
285662 GACGTTTTTA
285672 TGAAAAATGTT
1 TGAAAAATGTT
285683 TGAAAAAT-TT
1 TGAAAAATGTT
285693 TGAAAAAT
1 TGAAAAAT
285701 CATCTAGTGG
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
10 10 0.56
11 8 0.44
ACGTcount: A:0.52, C:0.00, G:0.14, T:0.34
Consensus pattern (11 bp):
TGAAAAATGTT
Found at i:288424 original size:28 final size:28
Alignment explanation
Indices: 288348--289009 Score: 726
Period size: 28 Copynumber: 23.5 Consensus size: 28
288338 CACTAACTTG
* *
288348 TGTGGGCTTTGAAAAGAGTTGCCACCGACTT
1 TGTGGGCTTTG-AAAG-GGTGCCACTGAC-T
**
288379 GTGTGGGCTTTGAAAGGGTGCCACCAACT
1 -TGTGGGCTTTGAAAGGGTGCCACTGACT
* *
288408 TGTAGGCTTTGAAAGGGTATGCCACTTACT
1 TGTGGGCTTTGAAAGGG--TGCCACTGACT
*
288438 TGTGGGCTTTGAAAGGGTGCCATTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
*
288466 TGTGGGCTTTGAAAGGGTGCCACCGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
288494 TGTGGGCTTTGAAAGGGT---A-TGCCACT
1 TGTGGGCTTTGAAAGGGTGCCACTG--ACT
*
288520 TGTGGGCGTTGAAAGGGTGCCACTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* * * *
288548 TGTGGGCTTTGAAGGGGTACCCCTGCCT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
288576 TGTGGGCTTTGAAAGGGTGCCACTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* *
288604 TATGGGCTTTGAAA-GGTGCCACTAACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* *
288631 TGTGGTCTTTTG-AAGAGATGCCACTGACT
1 TGTGGGC-TTTGAAAG-GGTGCCACTGACT
* *
288660 TGTGGGCTTTGAAAGGATGCCATTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* * *
288688 TGTGGGATTCGAAAGGATGCCACTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
** *
288716 TGTGGGCTTTGAAAATGTGCCACTAACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
*
288744 TATGGGCTTTGAAAGGGTGCCACTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* * * *
288772 TATGGGCTTTGAAAGGATACCACTAACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* * *
288800 TGTGGTCTTTTG-AAGAGATGCCACTGACA
1 TGTGGGC-TTTGAAAG-GGTGCCACTGACT
***
288829 TGTGGGCTTTGAAAATATGCCACTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* * *
288857 TGTGGGCTTTGAAAGGATGCCATTAACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
288885 TGTGGGCTTTGAAAGGGTGCCACTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* *
288913 TGGGGGCTTTGAAAGGATGCCACTGACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
*** * *
288941 TGTGGGCTTTGAAAATATGCGACTAACT
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
* * *
288969 TGTGGGCTTTGAAAGGATGCCATTGACC
1 TGTGGGCTTTGAAAGGGTGCCACTGACT
288997 TGTGGGCTTTGAA
1 TGTGGGCTTTGAA
289010 GAGATAAACG
Statistics
Matches: 541, Mismatches: 74, Indels: 34
0.83 0.11 0.05
Matches are distributed among these distances:
24 1 0.00
25 1 0.00
26 20 0.04
27 19 0.04
28 404 0.75
29 44 0.08
30 37 0.07
31 4 0.01
32 11 0.02
ACGTcount: A:0.22, C:0.18, G:0.31, T:0.30
Consensus pattern (28 bp):
TGTGGGCTTTGAAAGGGTGCCACTGACT
Found at i:290250 original size:15 final size:15
Alignment explanation
Indices: 290232--290305 Score: 53
Period size: 15 Copynumber: 4.7 Consensus size: 15
290222 TCTGGACTCT
290232 TTTTTTGTTTGTTTG
1 TTTTTTGTTTGTTTG
*
290247 TTTTTTGTTTTTTTTTAG
1 TTTTTTG--TTTGTTT-G
*
290265 TTTTTTAGTTT-TTGG
1 TTTTTT-GTTTGTTTG
*
290280 TTTTTTCTGTTGTGTT-
1 TTTTTTGT-TTGT-TTG
290296 TTTTTTGTTT
1 TTTTTTGTTT
290306 TTTTCTTGGT
Statistics
Matches: 47, Mismatches: 5, Indels: 14
0.71 0.08 0.21
Matches are distributed among these distances:
14 1 0.02
15 18 0.38
16 10 0.21
17 10 0.21
18 7 0.15
19 1 0.02
ACGTcount: A:0.03, C:0.01, G:0.16, T:0.80
Consensus pattern (15 bp):
TTTTTTGTTTGTTTG
Found at i:290258 original size:8 final size:8
Alignment explanation
Indices: 290231--290338 Score: 62
Period size: 8 Copynumber: 13.0 Consensus size: 8
290221 ATCTGGACTC
290231 TTTTTTTG
1 TTTTTTTG
*
290239 TTTGTTTG
1 TTTTTTTG
*
290247 TTTTTTGTT
1 TTTTTT-TG
290256 TTTTTTTAG
1 TTTTTTT-G
*
290265 TTTTTTAG
1 TTTTTTTG
*
290273 -TTTTTGG
1 TTTTTTTG
290280 TTTTTTCTG
1 TTTTTT-TG
290289 TTGTGTTTT-
1 TT-T-TTTTG
290298 TTTTGTTT-
1 TTTT-TTTG
*
290306 TTTTCTTGG
1 TTTT-TTTG
290315 TTTTTCTTG
1 TTTTT-TTG
290324 -TTTTTTG
1 TTTTTTTG
*
290331 CTTTTTTG
1 TTTTTTTG
290339 GTACGAAGCA
Statistics
Matches: 80, Mismatches: 10, Indels: 20
0.73 0.09 0.18
Matches are distributed among these distances:
7 10 0.12
8 41 0.51
9 24 0.30
10 2 0.03
11 3 0.04
ACGTcount: A:0.02, C:0.04, G:0.16, T:0.79
Consensus pattern (8 bp):
TTTTTTTG
Found at i:290317 original size:21 final size:23
Alignment explanation
Indices: 290273--290329 Score: 73
Period size: 21 Copynumber: 2.6 Consensus size: 23
290263 AGTTTTTTAG
* *
290273 TTTTTGGTTTTTTCTGTTGTGTT
1 TTTTTTGTTTTTTCTCTTGTGTT
290296 TTTTTTGTTTTTT-TCTTG-GTT
1 TTTTTTGTTTTTTCTCTTGTGTT
*
290317 TTTCTTGTTTTTT
1 TTTTTTGTTTTTT
290330 GCTTTTTTGG
Statistics
Matches: 31, Mismatches: 3, Indels: 2
0.86 0.08 0.06
Matches are distributed among these distances:
21 15 0.48
22 4 0.13
23 12 0.39
ACGTcount: A:0.00, C:0.05, G:0.16, T:0.79
Consensus pattern (23 bp):
TTTTTTGTTTTTTCTCTTGTGTT
Found at i:302779 original size:20 final size:19
Alignment explanation
Indices: 302752--302825 Score: 67
Period size: 20 Copynumber: 3.7 Consensus size: 19
302742 GTAAAAAGAC
302752 AAAATGTATCGATACATTG
1 AAAATGTATCGATACATTG
*
302771 AAGAATGTATTGATACATTCG
1 AA-AATGTATCGATACATT-G
* * * *
302792 TATATGTATTGAAACATTG
1 AAAATGTATCGATACATTG
*
302811 AAAAATGTCTCGATA
1 -AAAATGTATCGATA
302826 TATCTGGGTA
Statistics
Matches: 43, Mismatches: 9, Indels: 5
0.75 0.16 0.09
Matches are distributed among these distances:
19 3 0.07
20 38 0.88
21 2 0.05
ACGTcount: A:0.41, C:0.09, G:0.16, T:0.34
Consensus pattern (19 bp):
AAAATGTATCGATACATTG
Found at i:305123 original size:476 final size:473
Alignment explanation
Indices: 303428--305195 Score: 2145
Period size: 476 Copynumber: 3.7 Consensus size: 473
303418 CGCCCGTTAC
* * *
303428 TAGGATACATGAGC-TTAATGCTTTGGTGTCACAAGAAATGCTTTTATTTCCACCATTTTTGATA
1 TAGGATACAAGA-CATTGATGCTTTGGTGTCACAAGAAAAGCTTTTATTTCCACCATTTTTGATA
* * * * * * * *
303492 GAATCAAAGTTTGTCTCTTAAATATGACAAATATGAATAGTCACACCAATCCCTATTTTTTTCAA
65 GAATCAAAGTTTGTCTCTTAAATAAGAAAAACACGAATAGTCATACAAATCCCCATTCTTTTCAA
* * * *
303557 GATTAGGCACCATAAACATAGTCCTT-TCATAAGGATACTCGATATTGACGCTTCGGTTTTGCAA
130 GATTAGGCACCATAAACATAGT-CTTCTCATAAAGATAC-AGATATTGACGCTTTGGTTTCGCAA
* * * *
303621 GAAAGGCTTTCTTCCCCCTAATTTTTGTAAAGTCTAAGATCATACCTCAAATGAGACAAACATGG
193 GAAAGGCTTTCTTCCACC-AATTTTTGTAAAGTCTAAGTTCGTACCTCAAATAAGACAAACATGG
* *
303686 ATTCTAGTAATGATCTTTATTCATTTT-TGGGTTAGGCACTATAAACACATTCTCCTCATTAGGA
257 ATTCTAGTAATGATCTTCATTCATTTTGT-GATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * *
303750 TAAATGATGTTGATGATTTTCTTTTGCAAGGAAAACTTTTCTTTACCCTATTTTCCTTAAAATCA
321 TAAATGATATTCATGATTTTCTTTTGC-ATGAAAACTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * * * * * *
303815 AAATTCATCCCTTCAATAAGACAAGCAACAATTCTCATAACATTCTCTATTCTATTCAAGATTGG
385 AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
*
303880 GAACCAAAAACACATTCCCGTTAT
450 GAACCAAAAACACATTCCCGTCAT
* * * * *
303904 TAGGATACAAGACATTGATGCCTTGGAGTCGCAAGAAAAGCTTATATTTCCACCGTTTTTGATAG
1 TAGGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
*
303969 AATCAAAGTTTGTCTCTTAAATAA-AACAAACACGAATAGTCATACAAATCCCCATTCTTTTCAG
66 AATCAAAGTTTGTCTCTTAAATAAGAA-AAACACGAATAGTCATACAAATCCCCATTCTTTTCAA
* * * * *
304033 GATTAGGCACC-TAAACATAGTCTTTTCATACAGATACAGAATATTGATGCTTTGGTTTTGTAAG
130 GATTAGGCACCATAAACATAGTCTTCTCATAAAGATACAG-ATATTGACGCTTTGGTTTCGCAAG
* * * *
304097 AAAGGCTTTCTTTCCACCACTTTTTGTAAAGTC-AATGTTCGTGCCTCAAATAAGGCAAACGTGG
194 AAAGGCTTTC-TTCCACCAATTTTTGTAAAGTCTAA-GTTCGTACCTCAAATAAGACAAACATGG
* * *
304161 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGTACTATAAACATATTCTCCTCAATAGGAT
257 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
304226 AAATGATATTCACGATTTTCTTTTGCATG-GAA--TTTCTTTGCCCTA-TTTCCTTAATACCAAA
322 AAATGATATTCATGATTTTCTTTTGCATGAAAACTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * *
304287 ATTCAACCTTTAAAAATGACAAGCATCGATTCTCACAACAGT-TGCCATTCTTTTCAAGTTTGGG
387 ATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCT-CCATTCTTTTCAAGATTGGG
* * *
304351 AAGCAAAAGCACATTCCCTTCAT
451 AACCAAAAACACATTCCCGTCAT
** * *** *
304374 TAGGATACAAGACATTGATGCACTGGTGTCACAAGAAAAGCTTTTTCTTTTGGCCATTTTTTATA
1 TAGGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAGC-TTTTATTTCCACCATTTTTGATA
* * * * * * * *
304439 GAATCAAAGTTTGTATCTTAAATAAGACAAACATGAATAGTCGTGCAAATCCCCATTGTATTCAG
65 GAATCAAAGTTTGTCTCTTAAATAAGAAAAACACGAATAGTCATACAAATCCCCATTCTTTTCAA
* * * * * * * *
304504 GATTAGGCACCATAAACATAGTTTTCTCATGAGGATACACAAAGTGGATGCTTTGGTTTCGCAGG
130 GATTAGGCACCATAAACATAGTCTTCTCATAAAGATACAGATA-TTGACGCTTTGGTTTCGCAAG
* * * *
304569 AAAGGCTTTCTTCTACTAATTTTTGTGAAGTCTAAGTTCGTACCTCAAATAAGACAAACATGAAT
194 AAAGGCTTTCTTCCACCAATTTTTGTAAAGTCTAAGTTCGTACCTCAAATAAGACAAACATGGAT
*
304634 TCTAGTAATGATCTTCATTCATTTTGTGGTTAGGCACTATAAACACATTCTCCTCATTAGGATAA
259 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
** *
304699 ATGATATTCATGATTCACTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTTCTTAAAATCAAAA
324 ATGATATTCATGATTTTCTTTTGCATGAAAA-CTTTTCTTTGCCCTATTTTCCTTAAAATCAAAA
* * * * * *
304764 TTCCTCCCTTAAATATTACAAGCATCGATTCACGTAAGAGTCTCCATTATTTTCAAGATTGGGAA
388 TTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAA
**
304829 CCAAAAACACATTTTCGTCAT
453 CCAAAAACACATTCCCGTCAT
* * * * * * * *
304850 TAGGATACATGGCATTGATGCTTTAGTGTCGCAAGAAAAGGTTTTCTTTCGACCATTTTTTATAG
1 TAGGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
* * * *
304915 AATTAAAGTTTGTCTCTTAAATAAGAAAAACACGAATACTCATACTAATCCCCATTCCTTTCAAG
66 AATCAAAGTTTGTCTCTTAAATAAGAAAAACACGAATAGTCATACAAATCCCCATTCTTTTCAAG
* * *
304980 ATTAGGCACCATAAACATAGTCTTCTCAAAAAAATACATGATATTGACGCTTTGCTTTCGCAAGA
131 ATTAGGCACCATAAACATAGTCTTCTCATAAAGATACA-GATATTGACGCTTTGGTTTCGCAAGA
* * ** * * *
305045 ACGGCTTTCTTCGCACCAATTATTGTGGAGTCTCAGTTCGTGCCTCAAATGAGACAAACATGGAT
195 AAGGCTTTCTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTACCTCAAATAAGACAAACATGGAT
** * *
305110 TCTAGTAATGATCTTCATTCACGTTGTGATTGGGCACTATAAACACATTTTCCTCATTAGGATAA
259 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
305175 ATGATATTGATGGTTTTCTTT
324 ATGATATTCATGATTTTCTTT
305196 CCCTTAAATA
Statistics
Matches: 1097, Mismatches: 174, Indels: 42
0.84 0.13 0.03
Matches are distributed among these distances:
469 1 0.00
470 120 0.11
471 226 0.21
472 54 0.05
473 2 0.00
474 8 0.01
475 320 0.29
476 365 0.33
477 1 0.00
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.35
Consensus pattern (473 bp):
TAGGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTATTTCCACCATTTTTGATAG
AATCAAAGTTTGTCTCTTAAATAAGAAAAACACGAATAGTCATACAAATCCCCATTCTTTTCAAG
ATTAGGCACCATAAACATAGTCTTCTCATAAAGATACAGATATTGACGCTTTGGTTTCGCAAGAA
AGGCTTTCTTCCACCAATTTTTGTAAAGTCTAAGTTCGTACCTCAAATAAGACAAACATGGATTC
TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
GATATTCATGATTTTCTTTTGCATGAAAACTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTC
ATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
AAAACACATTCCCGTCAT
Found at i:306290 original size:198 final size:196
Alignment explanation
Indices: 305929--306319 Score: 498
Period size: 198 Copynumber: 2.0 Consensus size: 196
305919 GATGCTTTGC
** * * *
305929 TTTTGCAGGAAAGGCCTTCTTCCACCAATTTTTGTGAAGTCTAAGTTCGTGCCTCAAAAAGGACA
1 TTTTGCAAAAAAGGCCTTCTTCCACCAATTTTTGTAAAGTCTAAGTTCATGCATCAAAAAGGACA
* * * * * * * * **
305994 AACATGGATTCTAGTAATGATGTTCATTCATTTTGTGATTAGGCACTATAAACACATTATCCTTG
66 AACATAGATTCTACTAAGGATCTACATTAATTTTGTGATTAGGAAATATAAACACATTATCCTCA
* * * * *
306059 TTTGGATAAACGATATTGATGATTTTTTTTTGCATG-GAAATCTCTTCTTTGCCCTATTTTCCTT
131 TTAGGATAAACGATATTGATAATTTTCTTTTGCATGAAAAAT-T-TTCTTTACCCTATTTTCCTT
306123 AGG
194 AGG
* *
306126 TTTTGCAAAAAAGGCTTTCTTCCGACCAATTTTTGTAAAGTCTAAGTTCATGCATCAAATGAGG-
1 TTTTGCAAAAAAGGCCTTCTTCC-ACCAATTTTTGTAAAGTCTAAGTTCATGCATCAAA-AAGGA
* *
306190 CACACATAGATTCTACTAAGGATCTACATTAATTTTGTGATTAGGAAATATAAACACATTCTCCT
64 CAAACATAGATTCTACTAAGGATCTACATTAATTTTGTGATTAGGAAATATAAACACATTATCCT
* *
306255 CATTAGGATAAATGATATTGGTAATTTTCTTTTGCATGAAAAATTTTCTTTACCCTATTTTCCTT
129 CATTAGGATAAACGATATTGATAATTTTCTTTTGCATGAAAAATTTTCTTTACCCTATTTTCCTT
306320 TAAATCAAAT
Statistics
Matches: 165, Mismatches: 26, Indels: 6
0.84 0.13 0.03
Matches are distributed among these distances:
197 39 0.24
198 119 0.72
199 7 0.04
ACGTcount: A:0.29, C:0.17, G:0.15, T:0.39
Consensus pattern (196 bp):
TTTTGCAAAAAAGGCCTTCTTCCACCAATTTTTGTAAAGTCTAAGTTCATGCATCAAAAAGGACA
AACATAGATTCTACTAAGGATCTACATTAATTTTGTGATTAGGAAATATAAACACATTATCCTCA
TTAGGATAAACGATATTGATAATTTTCTTTTGCATGAAAAATTTTCTTTACCCTATTTTCCTTAG
G
Found at i:307292 original size:157 final size:159
Alignment explanation
Indices: 306658--307699 Score: 420
Period size: 159 Copynumber: 6.6 Consensus size: 159
306648 TGATTCCTCT
*
306658 AATAAGACAAACATGGATTCTAGTAATG-ATCTTCATTCATTTT-GTGATTAGGCACTATAAACA
1 AATAAGACAAACATGGATTCTAGTAATGAATCTCCATTCATTTTCGTGATTAGGCACTATAAACA
* * * * * * * *
306721 AATTCTGCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCAT
66 AATTTTCCTCATTAGGATAAATGATATTGATGCTTTGCTTTCG-ATGGAAAGCTTTTCTTTACTT
*
306786 ATTTTCCTTAAAATCAAAATTCATCACTTA
130 ATTTTCCTGAAAATCAAAATTCATCACTTA
* * * * * * *
306816 AATAAGACAAGCATTGATTCTCGT-A-GCAGTCTCCATTC-TTTTCGAGATTAGGAACTA-AGAG
1 AATAAGACAAACATGGATTCTAGTAATG-AATCTCCATTCATTTTCGTGATTAGGCACTATA-AA
* * * * * * *
306877 CACA-TTCCCTTCATTAGGATATATGATATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTC
64 CAAATTTTCC-TCATTAGGATAAATGATATTGATGCTTTGCTTTCG-ATGGAAAGCTTTTCTTT-
* * * ** *
306941 CACCGTT-TTTT-AT-AGAATCAAAGTTTGTCTCTTA
126 -A-C-TTATTTTCCTGAAAATCAAAATTCATCACTTA
* * * * * *
306975 AATAAGACAAACA-AGA--ATAGTCATGGAAATCCCCATT-GTTTTCAG-GATTAGGCACCATAA
1 AATAAGACAAACATGGATTCTAGTAAT-G-AATCTCCATTCATTTTC-GTGATTAGGCACTATAA
* * * * * *
307035 ACATAGTCTT-CTCA-TAGGGATACATGATGTTGATGCTTTGGTTTC-CTAGGAAAGGC-TTTCA
63 ACA-AATTTTCCTCATTA-GGATAAATGATATTGATGCTTTGCTTTCGAT-GGAAA-GCTTTTC-
* * * * * * * * * * *
307096 TTAAATAATTTTCGTG-GAGTCTAAGTTCGTGACTCA
123 TTTACTTATTTTCCTGAAAATCAAAATTCATCACTTA
* *
307132 AATAAGACAAACATGGATTCTAGTAATG-ATCTTCATTCATTTT-GTGATTAGGCACTGTAAACA
1 AATAAGACAAACATGGATTCTAGTAATGAATCTCCATTCATTTTCGTGATTAGGCACTATAAACA
* * * * *
307195 AATTTTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTG-TGGAAATCTTTTCTTTGTCTT
66 AATTTTCCTCATTAGGATAAATGATATTGATGCTTTGCTTTCGATGGAAAGCTTTTCTTT-ACTT
*
307259 ATTTTCCTGAAAATTAAAATTCATCACTTA
130 ATTTTCCTGAAAATCAAAATTCATCACTTA
* * * ** * * * * *
307289 AATAAGGCAAGCATTGATTCCCGT-A-GCAGTCTCCATT-TTTTTCGAGATTAGGAACTAAAAAC
1 AATAAGACAAACATGGATTCTAGTAATG-AATCTCCATTCATTTTCGTGATTAGGCACTATAAAC
* * ** * * * * * *
307351 ACA-TTTCCTTCATTAGGATATATGCCATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCTTTCC
65 AAATTTTCC-TCATTAGGATAAATGATATTGATGCTTTGCTTTCG-ATGGAAAGCTTTTCTTTAC
** * * ** *
307415 ATCGTTTT--TGATAGAATTAAAGTTTGTCGCTTA
128 -TTATTTTCCTGA-A-AATCAAAATTCATCACTTA
* * * * * * *
307448 AATAAGACAAACACGAATAGTC-A-TACT-AATCCCCATTC-TTTTCATGATTACGCACCATAAA
1 AATAAGACAAACATGGAT--TCTAGTAATGAATCTCCATTCATTTTCGTGATTAGGCACTATAAA
* * * * * * * * *
307509 CATTATCTT-CTCATAAGGATACATGATATTGACGGC-TTGGTTTTG-TAAGAAAGGCTTTCTCG
64 CA-AATTTTCCTCATTAGGATAAATGATATTGA-TGCTTTGCTTTCGAT-GGAAA-GCTTT-TCT
* ** ** * * *
307571 TCACCAATTTT--TGTAATGTCTAAGTTCATGC-CTTG
124 TTACTTATTTTCCTG-AAAATCAAAATTCAT-CACTTA
* * * * *
307606 AATGAGACAAACGTGGATTCTAGTCATG-ATCTTCATTCATTTT-GTGATTAGGCATTATAAACA
1 AATAAGACAAACATGGATTCTAGTAATGAATCTCCATTCATTTTCGTGATTAGGCACTATAAACA
* * *
307669 CATTCTCCTCATTAGGATAAATGTTATTGAT
66 AATTTTCCTCATTAGGATAAATGATATTGAT
307700 AATTTTCTTT
Statistics
Matches: 642, Mismatches: 180, Indels: 125
0.68 0.19 0.13
Matches are distributed among these distances:
155 5 0.01
156 43 0.07
157 177 0.28
158 184 0.29
159 204 0.32
160 18 0.03
161 10 0.02
162 1 0.00
ACGTcount: A:0.31, C:0.17, G:0.16, T:0.37
Consensus pattern (159 bp):
AATAAGACAAACATGGATTCTAGTAATGAATCTCCATTCATTTTCGTGATTAGGCACTATAAACA
AATTTTCCTCATTAGGATAAATGATATTGATGCTTTGCTTTCGATGGAAAGCTTTTCTTTACTTA
TTTTCCTGAAAATCAAAATTCATCACTTA
Found at i:307900 original size:476 final size:473
Alignment explanation
Indices: 306124--311626 Score: 5627
Period size: 476 Copynumber: 11.5 Consensus size: 473
306114 ATTTTCCTTA
* * * * *
306124 GGTTTTGCAAAAAAGGCTTTCTTCCGACCAATTTTTGTAAAGTCTAAGTTCATGCATCAAATGAG
1 GGTTTCGCAAGAAAGGCTTTC-TCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
* * * * * * * * *
306189 GCACACATAGATTCTACTAAGGATCTACATTAATTTTGTGATTAGGAAATATAAACACATTCTCC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
* * ** *
306254 TCATTAGGATAAATGATATTGGTAATTTTCTTTTGCAT-GAAAAATTTTCTTTACCCTATTTTCC
130 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
* * * * *
306318 TTTAAATC-AAATTCATCCCTTAAATAAGATCAAGCATTGATTCACATAACAGACTCTATTCTTT
195 TTAAAATCAAAATTCATCCCTTAAATAAGA-CAAGC-TTGATTCTCATAAGAGTCTCCATTCTTT
* * * * * *
306382 TCGAGATTGGGAACTAAGAACACACTCTCTTCATTAGGATGCACGACATTGATGCTTTGGTGTCA
258 TCAAGATTGGGAAC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
** * * *
306447 CAAGAAAATATTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTGGTAC-CTTAACTAAAACAAA
322 CAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAA
* * * * * * * *
306511 CATGAATAATTATGCTAATCCCCATTCTTTTCTGGAGTGGGCACCATAAACATAGTCTTTTCATA
386 CAAGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATA
306576 AGGATACACGATATTGATGCTTT
451 AGGATACACGATATTGATGCTTT
* * * * * * * * *
306599 GGTTTCACAAGGAAGGCTTTTTTCCCAACAATTTTTGTAAAGACTATGTTGATTCCTCTAATAAG
1 GGTTTCGCAAGAAAGGC-TTTCTCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
* *
306664 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACAAATTCTGC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
*
306729 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTG-CATATTTTCC
130 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
* *
306793 TTAAAATCAAAATTCATCACTTAAATAAGACAAGCATTGATTCTCGT-AGCAGTCTCCATTCTTT
195 TTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TTGATTCTCATAAG-AGTCTCCATTCTTT
* * * * * * *
306857 TCGAGATTAGGAACTAAGAGCACATTCCCTTCATTAGGATATATGATATTGATGCTTTGGTGTCG
258 TCAAGATTGGGAAC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
*
306922 CAAGAAAAGCTTTTCTTTCCACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
322 CAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
*** * *
306987 AAGAATAGTCATGGAAATCCCCATTGTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAG
387 AAGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAA
* *
307052 GGATACATGATGTTGATGCTTT
452 GGATACACGATATTGATGCTTT
* ** * * ** * * *
307074 GGTTTC-CTAGGAAAGGCTTTCAT-TAAATAATTTTCGTGGAGTCTAAGTTCGTGACTCAAATAA
1 GGTTTCGC-AAGAAAGGCTTTC-TCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGA
* * *
307137 GACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACAAATTTTC
64 GACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTC
* * *
307202 CTCATTAGGATAAATGATATTGATGGTTTTCTTTTG--TGGAAATCTTTTCTTTGTCTTATTTTC
129 CTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTC
* * * * * * *
307265 CTGAAAATTAAAATTCATCACTTAAATAAGGCAAGCATTGATTCCCGT-AGCAGTCTCCATTTTT
194 CTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TTGATTCTCATAAG-AGTCTCCATTCTT
* * * * * *
307329 TTCGAGATTAGGAACTAAAAACACATTTCCTTCATTAGGATATATGCCATTGATGTTTTGGTGTC
257 TTCAAGATTGGGAAC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * *
307394 GCAAGAAAAGCTTTTCTTTCCATCGTTTTTGATAGAATTAAAGTTTGTCGCTTAAATAAGACAAA
321 ACAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA
* * *
307459 CACGAATAGTCATACTAATCCCCATTCTTTTCATGATTACGCACCATAAACATTA-TCTTCTCAT
386 CAAGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA-TAGTCTTCTCAT
* *
307523 AAGGATACATGATATTGACGGC-TT
450 AAGGATACACGATATTGA-TGCTTT
* * * * * **
307547 GGTTTTGTAAGAAAGGCTTTCTCGTCACCAATTTTTGTAATGTCTAAGTTCATGCCTTGAATGAG
1 GGTTTCGCAAGAAAGGCTTTCTC-CCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
* * *
307612 ACAAACGTGGATTCTAGTCATGATCTTCATTCATTTTGTGATTAGGCATTATAAACACATTCTCC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
* * * * *
307677 TCATTAGGATAAATGTTATTGATAATTTTCTTTTGCATAGAAATCTTTTCTTGGCCCTATTTTCA
130 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
* * * * *
307742 ATAAAATCAAAAATCATCCCTTAAATATGACAAGCTTCGATTCCCGTAAGAGTCTCCATTCTTTT
195 TTAAAATCAAAATTCATCCCTTAAATAAGACAAGCTT-GATTCTCATAAGAGTCTCCATTCTTTT
* * *
307807 AAAGATTGGGAACAAAGAACACATTCCCTTCATTAGGATACATGACGTTGATG-TGTTGGTGTCT
259 CAAGATTGGGAACAAA-AACACATTCCCTTCATTAGGATACATGACATTGATGCT-TTGGTGTCA
* * * *
307871 CAAGAAAAGTTTTTCTTTCCACTGTTTTTGATAGAATGAAAGTTTGTATCTTAAATAAGACAAAC
322 CAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
** * **
307936 AAGAATAGTTGT-GTAAATCCGTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATA
387 AAGAATAGTCATACT-AATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATA
* *
308000 AGGATACACAACATTGATGCTTT
451 AGGATACACGATATTGATGCTTT
** * * *
308023 GGTTTCATAAGAAAGGCTTTCTTCCCAACAATTTTTGTAAAGTCGAAGTTGATTCCTCAAATGAG
1 GGTTTCGCAAGAAAGGCTTTC-TCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
* * ** * * * *
308088 ACAAGCGTAAATTCTAGTCATGATATTCGTTCATTTTGTGATTAAGCACTATAAACACATTCTCC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
* * * *
308153 TCAATAGGATAAATGATATTGATGATTTTTTTTTGCATGGAAATCTTTTCTTTGCCCTCTTTTTC
130 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
* * * *
308218 TTAAAATTAAAATTCATCCCCTAAATATGACAAGCTTCATCTCTCATAAGAGTCTCCATTCTTTT
195 TTAAAATCAAAATTCATCCCTTAAATAAGACAAGCTTGAT-TCTCATAAGAGTCTCCATTCTTTT
* * * * *
308283 CAAGATTGGGAACTAAGAATACATTCCCTTCTTTACGATACATGACATTAATGCTTTGGTGTCAC
259 CAAGATTGGGAAC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* * * *
308348 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTGTATATATTAAATAAGACAAACA
323 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
* * * *
308413 TGAATAGTTATGCTAATCCCCATTCTTTTCAGGATTAGGCACCATAAATATAGTCTTCTCATAAG
388 AGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAG
* **
308478 GATACACGATACTGACACTTT
453 GATACACGATATTGATGCTTT
* * * *
308499 GGTTTCGCCAGAAAGGCTTTCTTCCCAACAATTTTTGCAAAGTCTAAGTTGATGTCTCAAATGAG
1 GGTTTCGCAAGAAAGGCTTTC-TCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
* *
308564 ACAAACATGGATTCTAGAAATGATCTTCATTCATTTTGTGATTAGGCACTATAAGCACATTCTCC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
** * * *
308629 AAATTAGGATAAATGATATTGATGATTTTCTTTTGTATGAAAATCATTTCTTTGCCCTATTTTCC
130 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
* * * * * *
308694 TTAAAATTAAAATTCATCACC-TAAATAAGACAAGTATTGATCCTCATAATAGTCTTCATTGTTT
195 TTAAAATCAAAATTCATC-CCTTAAATAAGACAAG-CTTGATTCTCATAAGAGTCTCCATTCTTT
* * * * * *
308758 TCAAGATTGGGAACCAAAAGCACATTCCCTTTATTAGGATATAAGACATTGTTGCATTGGTGTCA
258 TCAAGATTGGGAA-CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
* * * * *
308823 CTAGAAACGGTTTT-TTT--ACCGTTTTTGATAGAATTATAGTTTGTCTCTTAAATAAGACAAAC
322 CAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
* * * *
308885 ACGAATAGTCATGCTAATCCCCATTCTTTCCACGATTAGGCACCATAAACATTA-TCTTCTCATA
387 AAGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA-TAGTCTTCTCATA
* *
308949 AGGATTCACGATATTGAAGCTTT
451 AGGATACACGATATTGATGCTTT
* * * * *
308972 GGTTTCGTAAGAAAGGCTTTCTTGCC-ACTAATTTTTGTAAAGTCAAAGTTCGTGTCTCAAATGA
1 GGTTTCGCAAGAAAGGCTTTC-TCCCAAC-AATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGA
** * * * * *
309036 GACAAATGTAGATTCTAGTAATAATCTTTAGTCATTTTGTGATTAGG----AT---GA-A-----
64 GACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTC
* * * *
309088 --C-----G----AT--T-TTCATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTGTCTTC
129 CTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTC
* * * *
309139 CTTAATATCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTT
194 CTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TTGATTCTCATAAGAGTCTCCATTCTTT
* * * * *
309204 TCAAGATTGGGAAGCAAAAGCACTTTCCCTTTATTAGGATACATAACATTGATGCATTGGTGTCA
258 TCAAGATTGGGAA-CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
* * *
309269 CAAGAAAAGCTTTTCTTTCCACCATTTTAT-ATAGAAACAAAGTTTGTATCTTAAATAAGACAAA
322 CAAGAAAAGCTTTTCTTTCCACCGTTTT-TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA
* * * *
309333 CAAAAATAGTCATACTAATCCCCATTCTTTTCAAGATTAGGTACCACAAACATAGTCTTCTCATA
386 CAAGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATA
309398 AGGATACACGATATTGATGCTTT
451 AGGATACACGATATTGATGCTTT
* *
309421 GGTTTCGCAAGAAAGGCTTTCTTCCCAATAATTTTTGTAAAGTCTAAGTTGATGCCTCAAATGAG
1 GGTTTCGCAAGAAAGGCTTTC-TCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
* * * * * *
309486 ACAAACATTGAATCTAATAATGATCTTCATTCAATTTGTGATTAGGCACTATAAACATATCCTCC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
309551 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
130 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
* * * * * *
309616 TTAAAATCAAAATTTATCCCCTAAATAAGACAAGAATTGATTCTCATAACAGTCTCTACTCTTTT
195 TTAAAATCAAAATTCATCCCTTAAATAAGACAAG-CTTGATTCTCATAAGAGTCTCCATTCTTTT
* * * * *
309681 CAAGATTGGGAGCCAAAAGCACATTCCCTTCTTTAGGATACATGACATTAATGCTTCGGTGTCAC
259 CAAGATTGGGA-ACAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* * * * * *
309746 AAGAAAAGCTTTTCCTTCTAGCATTTTTGATAGAATCAAAGTTTGTATCATAAATAAGACAAACA
323 AAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA
* * * * * * *
309811 AGAATAGTCGTACTAATCCCTATACTTTTTACGATTAGGCGCCATAAACATAGTCCTCTCATAAG
388 AGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAG
309876 GATACACGATATTGATGCTTT
453 GATACACGATATTGATGCTTT
* ** * * * * * * *
309897 GGTTACATAGGAAAGGCTTTCTTCCACCAATTTTTGTGAAGTCTAAGTTCACGCCTAAAATAAGA
1 GGTTTCGCAAGAAAGGCTTTCTCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGA
* * *
309962 CAAACATGGATTTTAGTAATGATGTTCATTTC-TTTTGTGATTAGGCACTATAAACACATTCTCG
66 CAAACATGGATTCTAGTAATGATCTTCA-TTCATTTTGTGATTAGGCACTATAAACACATTCTCC
* * *
310026 TCATTAGGATAAATGATATTGATGATTTTGTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCC
130 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCC
* * * ** * *
310091 TTAAAAGCAGAATTCA-----T-AATAAGACAAGGATTGATTCTTGTAATAGTCTCAATTCTTTT
195 TTAAAATCAAAATTCATCCCTTAAATAAGACAA-GCTTGATTCTCATAAGAGTCTCCATTCTTTT
* * * *
310150 CAAGATTGGGAAAAAAAAGCATATTCTCTTCTTTAGGATACATGACATAT-ATGCTTTGGTGTCA
259 CAAGATTGGGAACAAAAA-CACATTCCCTTCATTAGGATACATGACAT-TGATGCTTTGGTGTCA
* ** * * * * * * *
310214 AAAGAAAAGGATTTCTTTTCAGCATTTTTTATAGAATAAAAGTTTGTCTCTTAAATAAGATAAGC
322 CAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
* ** * * * *
310279 ATGAATTCTCATACTAATCCCCATTCTTTTCAGAATTAGGCACCAAAAACATTGTCTTTTTC-TA
387 AAGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC-TTCTCATA
* *
310343 AGGAAACACGATATCT-ATACTTT
451 AGGATACACGATAT-TGATGCTTT
* * * * *
310366 GGTTTCACAAGAAGGGCTTTCTTCCACCAATTTTTGTAAAGTCTAAGTTCGA-GCCTCAAATTAG
1 GGTTTCGCAAGAAAGGCTTTCTCCCAACAATTTTTGTAAAGTCTAAGTTC-ATGCCTCAAATGAG
** * * * * *
310430 ATGAACATGGATTCTAGTAATGATCTTCATTAAGTTCGTGGCTCAAATGGGACAAACATGGATTC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCA-TT--TTG-T-GATTAGG-C--AC-T--A---
* * * * * * ** * **
310495 TAGTAATGACCTTCAT--TCATTTTGTGAT-TAGGCACTA-TAAACATATTCTCCT-CAATAGGA
116 TA--AA-CACATTC-TCCTCA-TTAG-GATAAATG-A-TATTGATGATTTTCTTTTGC-AT-GG-
** * **** * * * * ****
310555 TAAAT-GATACTGATTAATTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAACC
170 -AAATCTTTTCT--TTGCCCTATTTT-CCT-TAAA----ATC----AAAA--------TT----C
* * * *
310619 AAAATTCATCTCTTAAATATGACAAGCTTCGATTCTCATAAGAGTCTTCATTCTTTTCGAGATTA
210 ---A-TC--C-CTTAAATAAGACAAGCTT-GATTCTCATAAGAGTCTCCATTCTTTTCAAGATTG
* * * * * *
310684 GGAACTAAGAACATATTCCCTTCATTAGGATATATGACATTGATTCTTTGGTGTCACAGGTAAAG
267 GGAAC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAG
* * * * *
310749 CATTTT-GTTCCACCATTTTTGATAGAATCAAAGTATGTATCTTAAATAAGACAAACATGAATAG
331 C-TTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATAG
* *
310813 TCCTACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAC
395 TCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAC
**
310878 GATATTGACACTTT
460 GATATTGATGCTTT
* * * *
310892 GGTTTCGCAAGAAAGGATTTCTTCCC-ACTAGA-TTCTGTAAAGTCTTAGTTCATGCATCAAATG
1 GGTTTCGCAAGAAAGGCTTTC-TCCCAAC-A-ATTTTTGTAAAGTCTAAGTTCATGCCTCAAATG
* * * * * *
310955 AGGCAAACATGGATTCTACTAATGATCTTTATTAATTTTGTGATTAGGCACTATAAACACACTCA
63 AGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCT
** * *
311020 CCTTTTTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCATTTCTTTGCCCTATTTT
128 CCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTT
* * * * * *
311085 CCTTAAAATCAAAATTCATCTCATAAATATGACAAGCATCGATTCTCGTAAGAGTCTCTATTCTT
193 CCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TTGATTCTCATAAGAGTCTCCATTCTT
* * *
311150 TTCGAGATTTGGAACTAAAAACACATTCCCTTCATTAGGATACATAACATTGATGCTTTGGTGTC
257 TTCAAGATTGGGAAC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * *
311215 ACAAGAAAAGC-TTTCTTTCCATCGTTTTTGACAGAATCAAAGTTTGTATCTCAAATAAGACAAA
321 ACAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA
* * * * *
311279 CAAGAATTGTTATACTACTCCCTATTCTTTTCAGGATTAGGCACCATAAATATAGTCTTCTCATA
386 CAAGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATA
* *
311344 AGGATACATGATATTGACGCTTT
451 AGGATACACGATATTGATGCTTT
* * * *
311367 GGTTTCGCAGGAAAGGCTTTCTTCCCAACAATTTTTGAAAAGTTTAAGTTGATGCCTCAAATGAG
1 GGTTTCGCAAGAAAGGCTTTC-TCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
* *
311432 ACAAACATGGATTCTAGTATTGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
65 ACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC
* * * *
311497 TCATTAGGATAAATGATATTGATGATTTTTTTTTTGCATGGAAATCTTTTATGTGCCCTATTTTT
130 TCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTC
* * * * * *
311562 CTTAAAACCAAAATTCATCCCTTAAAAAAGACAAGCATTGATTCTCGTAATAGCCTCTATTCTTT
194 CTTAAAATCAAAATTCATCCCTTAAATAAGACAAGC-TTGATTCTCATAAGAGTCTCCATTCTTT
311627 AGGATACATG
Statistics
Matches: 4207, Mismatches: 659, Indels: 323
0.81 0.13 0.06
Matches are distributed among these distances:
445 2 0.00
446 163 0.04
447 4 0.00
448 2 0.00
449 208 0.05
450 2 0.00
453 3 0.00
456 1 0.00
457 1 0.00
464 1 0.00
465 1 0.00
466 1 0.00
468 6 0.00
469 287 0.07
470 10 0.00
472 22 0.01
473 487 0.12
474 264 0.06
475 816 0.19
476 1477 0.35
477 18 0.00
478 1 0.00
479 2 0.00
480 2 0.00
483 3 0.00
485 5 0.00
486 11 0.00
487 17 0.00
488 3 0.00
489 3 0.00
490 4 0.00
491 8 0.00
492 2 0.00
493 3 0.00
497 1 0.00
499 2 0.00
503 3 0.00
504 2 0.00
505 7 0.00
506 4 0.00
507 3 0.00
508 4 0.00
509 17 0.00
510 9 0.00
511 3 0.00
513 3 0.00
516 2 0.00
518 1 0.00
519 2 0.00
521 1 0.00
522 4 0.00
523 1 0.00
524 2 0.00
525 10 0.00
526 219 0.05
527 66 0.02
528 1 0.00
ACGTcount: A:0.32, C:0.17, G:0.14, T:0.36
Consensus pattern (473 bp):
GGTTTCGCAAGAAAGGCTTTCTCCCAACAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGA
CAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCT
CATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCT
TAAAATCAAAATTCATCCCTTAAATAAGACAAGCTTGATTCTCATAAGAGTCTCCATTCTTTTCA
AGATTGGGAACAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
AAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGA
ATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGAT
ACACGATATTGATGCTTT
Found at i:317155 original size:42 final size:42
Alignment explanation
Indices: 317100--317218 Score: 184
Period size: 42 Copynumber: 2.8 Consensus size: 42
317090 TTCTTCTCTC
* * *
317100 CTCCTCCTGTCATCCATCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
*
317142 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
317184 CTCCTCCTATCATCCCTCCTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
317219 TTGAGGGCTA
Statistics
Matches: 70, Mismatches: 7, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
42 70 1.00
ACGTcount: A:0.09, C:0.45, G:0.03, T:0.43
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:317159 original size:12 final size:11
Alignment explanation
Indices: 317133--317208 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
317123 TCTATTATCT
*
317133 CTCCTGTCTCTC
1 CTCCTATCTC-C
317145 CTCCTATCATCC
1 CTCCTATC-TCC
317157 CTCCTATCT--
1 CTCCTATCTCC
*
317166 CTACTATCT--
1 CTCCTATCTCC
*
317175 CTCCTGTCTCTC
1 CTCCTATCTC-C
317187 CTCCTATCATCC
1 CTCCTATC-TCC
*
317199 CTCCTCTCTC
1 CTCCTATCTC
317209 TTCTTTCTCT
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 3 0.06
12 31 0.58
13 4 0.08
ACGTcount: A:0.09, C:0.49, G:0.03, T:0.39
Consensus pattern (11 bp):
CTCCTATCTCC
Found at i:317160 original size:24 final size:24
Alignment explanation
Indices: 317124--317209 Score: 85
Period size: 24 Copynumber: 3.8 Consensus size: 24
317114 CATCCTCTCT
* *
317124 CTATTATCTCTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
* *
317148 CTATCATCCCTCC--TATCT-CTA
1 CTATCATCCCTCCTGTCTCTCCTC
317169 CTATC-T--CTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
*
317190 CTATCATCCCTCCTCTCTCT
1 CTATCATCCCTCCTGTCTCT
317210 TCTTTCTCTT
Statistics
Matches: 49, Mismatches: 7, Indels: 12
0.72 0.10 0.18
Matches are distributed among these distances:
18 4 0.08
20 5 0.10
21 14 0.29
22 5 0.10
24 21 0.43
ACGTcount: A:0.10, C:0.45, G:0.02, T:0.42
Consensus pattern (24 bp):
CTATCATCCCTCCTGTCTCTCCTC
Found at i:317184 original size:18 final size:18
Alignment explanation
Indices: 317116--317185 Score: 50
Period size: 18 Copynumber: 3.6 Consensus size: 18
317106 CTGTCATCCA
* *
317116 TCCTCTCTCTATTATCTC
1 TCCTGTCTCTACTATCTC
*
317134 TCCTGTCTCTCCTCCTATCATCCC
1 TCCTG--TCT-CTACTATC-T--C
*
317158 TCCTATCTCTACTATCTC
1 TCCTGTCTCTACTATCTC
317176 TCCTGTCTCT
1 TCCTGTCTCT
317186 CCTCCTATCA
Statistics
Matches: 40, Mismatches: 6, Indels: 12
0.69 0.10 0.21
Matches are distributed among these distances:
18 14 0.35
20 4 0.10
21 13 0.32
22 4 0.10
24 5 0.12
ACGTcount: A:0.10, C:0.43, G:0.03, T:0.44
Consensus pattern (18 bp):
TCCTGTCTCTACTATCTC
Found at i:319878 original size:476 final size:476
Alignment explanation
Indices: 318933--385494 Score: 101558
Period size: 476 Copynumber: 139.9 Consensus size: 476
318923 CATTCTTTTC
* * * * *
318933 AAGTAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCCAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* ** *
318997 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACATAATATTGATTGTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * **
319062 AAAGGCTTTCTTGTCACCAATTTTTGCAAAGTCTAAGTTCGTGCCTCAAATGTGGCAAACAAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * *
319127 TTCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * *
319191 AACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAA
*
319255 AATTCATCCCATAATTATGACAAGCATCGTTTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
319320 AGCTAAGAACATATTCCATTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
319385 TTTCTTTCCATCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* *
319408 AAGTAAAGTTTGTTTCTTAAATAGGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
319473 ATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
319538 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
319603 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTATCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
319668 ACGATATTCACGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
* *
319732 ATTCATCCCATAATTATGACAAGCATCGATTCTTGTAAGACTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
**
319797 GCTAAGAACATTTTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
319862 TTCTTTCCACCGTTTTTTATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * *
319884 AAGTAAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
319949 ATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAAAA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
320014 AATGG-TTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACGAGGA
131 AA-GGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * *
320078 TTCTAGTAATGATCTTCATAT-ATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGTAT
195 TTCTAGTAATGATCTTCAT-TCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * * * *
320142 AAACGATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTATTTTCCATAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * * * * *
320207 AATTCATCCCTTAAATATGACAAGCATCAATTCTCATAATAGTCTCCACTT-TTTACGAGATTAG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCA-TTCTTTTCGAGATT-G
* * * *
320271 GAAGC-AA-AAGCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
320334 TGTTTTCTTTCCACCGTTTTTGATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* *
320360 AAGTAAAGTTTGTCTCTTAACTAAGACAAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
320425 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTTATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
320490 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAACTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
320555 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
320620 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTTCCCCTA-TTTCCTTAATTTCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTC-TTTGCGCTATTTTCCTTAATATCAAA
* *
320684 ATTCATCCCATAATTACGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
** * *
320749 GCTAAGAACACATTGGCTTCATAAGGATACATGACATTGATGCTTTGGAT-TCGCAAGAAAATGT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGG-TGTCGCAAGAAAATGT
*
320813 TTTCTTTCCACTGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
320836 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
320901 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * * * *
320966 AAGGCTTTCTTGTCGCCAATTTTTGCAAAGTCTAAGTTCATGACTCAAATGTGGCAAACGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
321031 TCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
321095 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
* *
321159 ATTCATCCCATAATTATGACAAGCATCGATTCTTGTAAGACTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
321224 GCTAAGAACACATTCCCTTTATTAGGAAACATGACATTGATGCTTTGGTGTCGTAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
321289 TTCTTTCCACCGTTTTTTATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * *
321311 AAGTAAAGTTTGTCTCTT-AATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
321375 ATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAAAA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
321440 AATGG-TTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAGACGAGGA
131 AA-GGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* *
321504 TTCTAGTAATGATCTTCATAT-ATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGAT
195 TTCTAGTAATGATCTTCAT-TCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * * * *
321568 AAACGATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTATTTTCCATAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * * * * *
321633 AATTCATCCCTTAAATATGACAAGCATCAATTCTCATAATAGTCTCCACTT-TTTACGAGATTAG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCA-TTCTTTTCGAGATT-G
* * *
321697 GAAGC-AAAAACACATTCCATTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAAT
387 GGAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAAT
321761 GTTTTCTTTCCACCGTTTTTGATAG
452 GTTTTCTTTCCACCGTTTTTGATAG
* *
321786 AAGTAAAGTTTGTCTCTTAACTAAGACAAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
321851 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTTATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
321916 AAGGCTTTCTTGTTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
321981 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTTTAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
322046 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTTCCCCTA-TTTCCTTAATTTCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTC-TTTGCGCTATTTTCCTTAATATCAAA
** *
322110 ATTCATCCCATAATTGCGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
322175 GCTAAGAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
322240 TTCTTTCCACTGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
322262 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
322327 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
322392 AAGGCTTTCTTGTCGCCAATTTTTGCAAAGTCTAAGTTCGTGCCTCAAATGTGGCAAACGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
322457 TCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
322521 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
* *
322585 ATTCATCCCATAATTATGACAAGCATCGATTCTTGTAAGACTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
322650 GCTAAGAACACATTCCCTTTATTAGGAAACATGACATTGATGCTTTGATGTCGTAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
322715 TTCTTTCCACCGTTTTTTATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * *
322737 AAGTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
322802 ATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAAAA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
322867 AATGG-TTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTTGTGCCTTAAATGAGACAAACGAGGA
131 AA-GGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
322931 TTCTAGTAATGATCTTCATAT-ATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
195 TTCTAGTAATGATCTTCAT-TCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * * * *
322995 AAACGATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTATTTTCCATAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * * * * *
323060 AATTCATCCCTTAAATATGACAAGCATCAATTCTCATAAAAGTCTCCACTT-TTTACGAGATTAG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCA-TTCTTTTCGAGATT-G
* * * * *
323124 GAAGC-AA-AAGCACATTCCTTTCATTAGGATACATGAAATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
323187 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * * * *
323213 AAGTAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCCAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* ** *
323277 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACATAATATTGATTGTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
323342 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTCCCTCAAATGAGACAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* *
323407 TTCTAGTAATGATCTTCATTCTTTCTATGATTAGGCACTATAAACACATTCTCCT-ATTTAGGAT
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCA-TTAGGAT
*
323471 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTACTATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* *
323536 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTTGAGATTGTG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
323601 AGCTAAGAACACATTCCATTCATTAGGAAACATGACATTGTTGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
* *
323666 TTTCTTTCCACCATTATTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * *
323689 AAGTAAAGTTTGTTTCTTAAATAGGACAAGCATGAATTGTCATGCTAGTCCCCATTCATTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
323754 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
323819 AAGGCTTTCTTGTCGCCAATTTTTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * **
323884 TCTAGTAATGATCTTCATTCTTTCTATGATTAGGCACTGTAAACACATTCTCCTGTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * *
323949 ACGATATTCACGATTTTCTTTTACATGGAAATCTTTTCTTTTCCCCT-GTTTCCTTAATTTCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTC-TTTGCGCTATTTTCCTTAATATCAAA
* *
324013 ATTCATCCCATAATTACGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
324078 GCTAAGAACACATTCGCTTCATAAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
324143 TTCTTTCCACTGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
324165 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
324230 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * **
324295 AAGGCTTTCTTGTCGCCAATTTTTGCAAAGTCTAAGTTCGTGCCTCAAATGTGGCAAACAAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
324360 TCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
324424 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
*
324488 ATTCATCCCATAATTATGACAAGCATCGTTTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
324553 GCTAAGAACATATTCCATTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
**
324618 TTCTTTCCATAGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
324640 AAGTAAAGTTTGTTTCTTAAATAGGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
324705 ATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
324770 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
324835 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
324899 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTT-TTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
*
324962 ATTCATCCCATAATTATGACAAGCATCGTTTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
325027 GCTAAGAACATATTCCATTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
325092 TTCTTTCCATCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * *
325114 AAGTAAAGTTTGTTTCTTAAATAGGACAAGCATGAATTATCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
325179 ATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
325244 AAGGCTTTCTTGTCGCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAAAGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
325309 TCTAGTAATAATCTTCATTCTTTCTATGATTAGGCACTATAAACACATTCTCCT-ATTTAGGATA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCA-TTAGGATA
*
325373 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTACTATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* *
325438 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTTGAGATTGTGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
325503 GCTAAGAACACATTCCATTCATTAGGAAACATGACATTGTTGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
325568 TTCTTTCCACCATTATTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * *
325590 AAGTAAAGTTTGTTTCTTAAATAGGACAAGCATGAATTGTCATGCTAGTCCCCATTCATTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
325655 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
325720 AAGGCTTTCTTGTCGCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * **
325785 TCTAGTAATGATCTTCATTCTTTCTATGATTAGGCACTGTAAACACATTCTCCTGTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * *
325850 ACGATATTCACGATTTTCTTTTACATGGAAATCTTTTCTTTTCCCCT-GTTTCCTTAATTTCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTC-TTTGCGCTATTTTCCTTAATATCAAA
* *
325914 ATTCATCCCATAATTACGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
325979 GCTAAGAACACATTCGCTTCATAAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
326044 TTCTTTCCACTGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
326066 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
326131 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * **
326196 AAGGCTTTCTTGTCGCCAATTTTTGCAAAGTCTAAGTTCGTGCCTCAAATGTGGCAAACAAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
326261 TCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
326325 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
*
326389 ATTCATCCCATAATTATGACAAGCATCGTTTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
326454 GCTAAGAACATATTCCATTCATTAGGAAACATAACATTGATGCTTTGGTGTCGCAAGAAAATGAT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
326519 TTCTTTCCATCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
326541 AAGTAAAGTTTGTTTCTTAAATAGGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
326606 ATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
326671 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
326736 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
326801 ACGATATTCACGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
* *
326865 ATTCATCCCATAATTATGACAAGCATCGATTCTTGTAAGACTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
326930 GCTAAGAACACTTTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
326995 TTCTTTCCACCGTTTTTTATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * *
327017 AAGTAAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
327082 ATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAAAA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
327147 AATGG-TTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACGAGGA
131 AA-GGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * *
327211 TTCTAGTAATGATCTTCATAT-ATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGTAT
195 TTCTAGTAATGATCTTCAT-TCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * * * *
327275 AAACGATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTATTTTCCATAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * * * * *
327340 AATTCATCCCTTAAATATGACAAGCATCAATTCTCATAATAGTCTCCACTT-TTTACGAGATTAG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCA-TTCTTTTCGAGATT-G
* * * *
327404 GAAGC-AA-AAGCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
327467 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * * *
327493 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGCCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
*
327557 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
327622 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGT-CTCTCAAATGAGGCAAACGAGG
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGG
* * * **
327686 ATTCTAGTAATGATCTTCATTCGTTCTATGATTAGGCACTATAAACACATTCTCCTGTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
327751 AAACGATATTCACGATTTTCTTTTGCATGGAAATATTTTCTTTGCGCTATTTTCCTCACTATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
*
327816 AATTCATCCCATAATTATGACAAGCATCGATTCTCATAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
327881 AGCTAACAACACATTCCATTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
327946 TTTCTTTCCACCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
*
327969 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
328034 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
328099 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCTTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
328164 TCTTGTAGTGATCTTAATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCT-ATTTAGGATA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCA-TTAGGATA
*
328228 AACGATATTCACGATTTTCTTTTGCATGG-AATCTTTTCTTTGCGCTATTTTCCTTACTATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* * * *
328292 ATTCATCGCATAATTATGACAAGCATCGATTCCCGTAAGAGGCTCCATTCTTTTCGATATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
328357 GCTAAGAACATATTCCTTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAGATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
**
328422 TTCTTTCCACTATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
328444 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTTAAGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
328509 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
328574 AAGGCTTTCTTGTCGCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGTGGCAAACGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
328639 TCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * *
328703 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCATTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
* *
328767 ATTCATCCCATAATTATGACAAGCATCGATTCTTGTAAGACTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
328832 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGTAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
328897 TTCTTTCCACCGTTTTTTATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * *
328919 AAGTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* ** * * *
328984 ATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACTTGATATTGATGCTTTGTTTTCGTAAAA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT-AAG
* * *
329049 AAAGG-TTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTTGTGCCTTAAATGAGAC-AATCGAGG
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAAT-GAGG
* *
329112 ATTCTAGTAATGATCTTCATAT-ATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGA
194 ATTCTAGTAATGATCTTCAT-TCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * * * *
329176 TAAACGATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTATTTTCCATAATATCA
258 TAAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCA
* * * * * * *
329241 AAATTCAACCCTTAAATATGACAAGCATCAATTCTCATAAAAGTCTCCACTT-TTTACGAGATTA
323 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCA-TTCTTTTCGAGATT-
* * * *
329305 GGAAGC-AA-AAGCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
329368 ATGTTTTCTTTCCACCGTTTTTTATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
* * * * *
329395 AAGTAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCCAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
329459 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACATGATATTGATTGTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * *
329524 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTCCCTCAAATGAGGCAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * **
329589 TTCTAGTAATGATCTTCATTCTTTCTATGATTAGGCACTATAAACACATTCTCCTGTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
329654 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAGTATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
329719 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
329784 GCTAAGAACACATTCCATTCATTAGGAAACATGACATTGTTGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
329849 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
329871 AAGTAAAGTTTGTTTCTTAAATAGGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
329936 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
330001 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
330066 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
330131 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTTCCCCTA-TTTCCTTAATTTCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTC-TTTGCGCTATTTTCCTTAATATCAAA
** *
330195 ATTCATCCCATAATTGCGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
330260 GCTAAGAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
330325 TTCTTTCCACTGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
330347 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
330412 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * **
330477 AAGGCTTTCTTGTCGCCAATTTTTGCAAAGTCTAAGTTCGTGCCTCAAATGTGGCAAACAAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
330542 TCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAA-AAATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
330606 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
*
330670 ATTCATCCCATAATTATGACAAGCATCGATTC-CTGTAAGACTCTCCATTCTTTTCGAGATTGGG
325 ATTCATCCCATAATTATGACAAGCATCGATTCTC-GTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
330734 AGCTAAGAACACTTTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
330799 TTTCTTTCCACCGTTTTTTATAG
454 TTTCTTTCCACCGTTTTTGATAG
* ** * * *
330822 AAGTAAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * * ** * *
330887 ATTAGGCACCATTAACTTTTTCTTCTCATAAGGATACAAGATATTGATGCTTTATTTTCCTTAAA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTT-CGTAAG
* * **
330952 AAATGG-TTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACAAGG
130 AAA-GGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
* * *
331016 ATTCTAGTAATGATCTTCATAT-ATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGTA
194 ATTCTAGTAATGATCTTCAT-TCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * * * *
331080 TAAACGATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTATTTTCCATAATATCA
258 TAAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCA
* * * * * * *
331145 AAATTCATCCCTTAAATATGACAGGCATCAATTCTCATAATAGTCTCCACTT-TTTACGAGATTA
323 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCA-TTCTTTTCGAGATT-
* * *
331209 GGAAGC-AA-AAGCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
331272 ATGTTTTCTTTCCACTGTTTTTGATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
*
331299 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTTATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
331364 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * **
331429 AAGGCTTTCTTGTCGCCAATTTTTGCAAAGTCTAAGTTCGTGCCTCAAATGTGGCAAACAAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
331494 TCTAATAATGGTCTTCATTCTTTTTGTGATTAGGTACTATAAACA-ATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
331558 ACGATATTCATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
* *
331622 ATTCATCCCATAATTATGACAAGCATAGATTCTCGTAAGAGTCTCCATTCTGTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
331687 GCTAAGAACATATTCCATTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
331752 TTCTTTCCATCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * * *
331774 AAGTAAAGTTTGTTTCCTAAATAGGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTATCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
331839 ATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
331904 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
331969 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
332034 ACGATATTCACGATTTTCTTTTGCAAGGAAATCTTTTCTTTGC-CTTATTTTCCTTAAAATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCAAA
* *
332098 ATTCATCCCATAATTATGACAAGCATCGATTCTTGTAAGACTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
**
332163 GCTAAGAACATTTTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
332228 TTCTTTCCACCGTTTTTTATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * *
332250 AAGTAAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * * *
332315 ATTAGGCACCATTAACTTTGTCTTCTCATAAAGATACACGATATTGATGCTTTGTTTTCGTAAAA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
332380 AATGG-TTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACGAGGA
131 AA-GGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * *
332444 TTCTAGTAATGATCTTCATAT-ATTTTGTTATTAGGCACTATAAACACGTTCTCCTCATTAGTAT
195 TTCTAGTAATGATCTTCAT-TCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * * * *
332508 AAACGATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTATTTTCCATAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * * * * * *
332573 AATTCATCCCTTAAATAAGACAAGCATCAATTCTCATAATAGTCTCCACTT-TTTACGAGATTAG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCA-TTCTTTTCGAGATT-G
* * * *
332637 GAAGC-AA-AAGCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
332700 TGTTTTCTTTCCACCGTTTTTGATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* *
332726 AAGTAAAGTTTGTCTCTTAACTAAGACAAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
332791 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTTATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
332856 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
332921 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTC-TTCAGGATA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AGGATA
332985 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
333050 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
333115 GCTAAGAACGCATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
333180 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * * *
333202 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
333267 GATTAGGCCCCATCAGCTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * *
333332 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGACGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * *
333397 TTCTAGTAATGATCTTCATTCTTTTTGTGATAAGGCACTATAAACACGTTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* *
333462 AATGATATTCACGATTTTCTTTTGTATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATC-AA
* *
333527 AATTCATCCCATAATTTTGACAAACATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
333592 AGCTAAGAACACAATCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
333657 TTTCTTTCCACCATTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * *
333680 AAGTAAACTTTGTCTCTAAAATGAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
333745 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
333810 AAGGGTTTCCTGTCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
333875 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTC-TCCAGGATA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCAT-TAGGATA
* *
333939 AACGATATTCGCGATTTTCTTTTGCATGAAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
334004 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
334069 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTAGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
334134 TTTTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * * *
334156 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
334221 GATTAGGCCCCATCAGCTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * *
334286 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGACGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * *
334351 TTCTAGTAATGATCTTCATTCTTTTTGTGATAAGGCACTATAAACACGTTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* *
334416 AATGATATTCACGATTTTCTTTTGTATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATC-AA
* * *
334481 AATTCATCCCATAATTTTGACAAACATCGATTCTCGTAAGAGTCTCCATTCTTTTTGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
334546 AGCTAAGAACACAATCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
334611 TTTCTTTCCACCATTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * * *
334634 AAGTAAACTTTGTCTCTAAAATGAGACAAGCATGGATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
334699 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
334764 AAGGGTTTCCTGTCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
334829 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTC-TCCAGGATA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCAT-TAGGATA
* *
334893 AACGATATTCGCGATTTTCTTTTGCATGAAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
334958 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
335023 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
335088 TTTTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * * *
335110 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
335175 GATTAGGCACCATCAGCTTTGTCTTCTCATCAGGATACACGAAATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
335240 AAAAGG-TTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGAGAAATGAGG
130 -AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
* *
335304 ATTCTAGTAATGATCTTCATTCTCTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
335369 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTA------TT--T-TC--
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
335423 ----C-T----TAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
335479 AGCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCACAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
* *
335544 TTTCTTTCCACTGTTTTTCATAG
454 TTTCTTTCCACCGTTTTTGATAG
* *
335567 AAGTAAAGTTTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
335632 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
335697 AAGGCTTTCTTG-CAACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGAGGA
131 AAGGCTTTCTTGTC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * * * *
335761 TTCTAGTACTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTGTCCTTATTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * * * * * ** *
335826 AACAATATTGATGATTTTTTTTTCCGTTGAAATCTTTTCTTTGCACTGGTTTCCATAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* * *
335891 ATTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTA
325 ATTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-
* * * * * * *
335953 GGAAGC-AA-AAGCACATTCCATTTATTAGGATAGATAACATTGATGCTTTGGTGTTGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
336016 ATGTTTTCTTTCCACCGTTTTTTATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
* * * *
336043 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCACTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
336107 GATTAGGCACCATAAACTTTTTCTTCTCATAAGGATACACAATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * *
336172 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
336237 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
336302 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTTTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
336367 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
336432 GCTAAGAACACATTCCTTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
336497 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * * *
336519 AAGTAAAG-TT-TCTCTTAAAAAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
336582 GATTAGGCACCATCAACTTTGTCTTCTCATTAGGATACACGATATTGATTCTTTGGTTTTGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
336647 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
336712 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* *
336777 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATGAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
336842 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
336907 GCTAAGAACACATTCCTTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
336972 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * * *
336994 AAGTAAAGTTTGTCTCTTAAAAAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
337059 GATTAGGCACCATCAACTTTGTCTTCTCATTAGGATACACGATATTGATTCTTTTGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
337124 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
337189 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
337254 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
*
337319 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTGTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
337384 GCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
337449 TTCTTTCCTCCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * * *
337471 AATTAAAGTTTGTCTCTTAAATAAGACAAGCACGAATTGTCATGCTAGTCCCCATTTGTTTCGTG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
337536 ATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * *
337600 AAAGGCTTTCTTGTCACCAATTTTTGTAAACTCTAAGTTTGTGCCTCCAATGAGACAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * * * *
337665 TTCTAGTACTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTGTCCTTATTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * * * * ** *
337730 AACAATATTGATGATTTT-TTTTCCGTTGAAATCTTTTCTTTGCACTGGTTTCCATAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* * *
337794 ATTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTA
325 ATTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-
* * * * * * *
337856 GGAAGC-AA-AAGCACATTCCATTTATTAGGATAGATAACATTGATGCTTTGGTGTTGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
337919 ATGTTTTCTTTCCACCGTTTTTTATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
* ** * * * *
337946 AAGTAAAGTTTGTCTCTTAAAAAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
338011 GATTAGGCACCATAAACTTTTTCTTCTCATAAGGATACACAATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * *
338076 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
338141 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
338206 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
*
338271 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTGTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
338336 GCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGGTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
338401 TTCTTTCCTCCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * * *
338423 AATTAAAGTTTGTCTCTTAAATAAGACAAGCACGAATTGTCATGCTAGTCCCCATTTGTTTCGTG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
338488 ATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * *
338552 AAAGGCTTTCTTGTCACCAATTTTTGTAAACTCTAAGTTTGTGCCTCCAATGAGACAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * * * * *
338617 TTCTACTACTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTGTCCTTATTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * * * * * ** *
338682 AACAATATTGATGATTTTTTTTTCCGTTGAAATCTTTTCTTTGCACTGGTTTCCATAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* * *
338747 ATTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTA
325 ATTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-
* * * * * * *
338809 GGAAGC-AA-AAGCACATTCCATTTATTAGGATAGATAACATTGATGCTTTGGTGTTGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
338872 ATGTTTTCTTTCCACCGTTTTTTATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
* ** * * * * *
338899 AAGTAAAGTTTGTCTCTTAAAAAAGACAAAAAAAGTATTGTCTTGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
338964 GATTAGGCACCATCAACTTTGTCTTCTCATTAGGATACACGATATTGATTCTTTGGTTTTGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
339029 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
339094 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * *
339159 AACGATATTCATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATGAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
*
339224 ATTGATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
339289 GCTAAGAACACATTCCTTTCATTAGGAAACATGGCATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
339354 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * * *
339376 AAGTAAAGTTTGTCTCTTAAAAAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
339441 GATTAGGCACCATCAGCTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
339506 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* *
339571 TTCTAGTAATGATCTTCATTTTTTTTGTGATTAGGCACTATAAACACATTCTCCTC-TCCAGGAT
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCAT-TAGGAT
* *
339635 AAACGATATTCACGATTTTCTTTTGCGTGGAAATCTTTTCTTTGCGCTATTTTACTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
339700 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
339765 AGCTAAGAACACAATCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
339830 TTTCTTTCCACCATTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
*
339853 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
339918 ATTAGGCTCCATCAACTTTGTTTTTTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
339983 AAGGCTTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* *
340048 TCTAGTAATGATCTTCATTCTTTTTGTCATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
340113 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTACTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
340178 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
340243 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
* *
340308 TATTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
*
340329 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
340394 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACATGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
340459 AAGGGTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
340524 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
340589 ACGATATTCACGATTTTCTTTTGCATGAAAATCTTTTCTTTGCGCTATTTTACTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
340654 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
340719 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
* *
340784 TCATTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
** * * * *
340805 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
340870 GATTAGGCACCATCAACTTTGTCTTCTCATCAA-AATACACGATCTTGATTCTTTGGTTTCGTAA
65 GATTAGGCACCATCAACTTTGTCTTCTCAT-AAGGATACACGATATTGATTCTTTGGTTTCGTAA
* *
340934 GAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
129 GAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
*
340999 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
*
341064 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTACGCTATTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
341129 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
341194 AGCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
341259 TTTCTTTCCTCCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * *
341282 AATTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTATCATGCTAGTCCCCATTTGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
341347 ATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
341411 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
341476 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* *
341541 AACGATATTCACAATTTTCTTTTGCATGGAAATATTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
*
341606 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCAAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
341671 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
341736 TTCATTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * * *
341758 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
*
341823 GATTAGGCACCATCAACTTTGTCTTCTCATCAA-AATACACGATATTGATTCTTTGGTTTCGTAA
65 GATTAGGCACCATCAACTTTGTCTTCTCAT-AAGGATACACGATATTGATTCTTTGGTTTCGTAA
* *
341887 GAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
129 GAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
*
341952 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
342017 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
*
342082 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCAAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
342147 AGCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
342212 TTTCTTTCCTCCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * *
342235 AATTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTATCATGCTAGTCCCCATTTGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
342300 ATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * * *
342364 AAAGGCTTTCTTGTCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGTCAAACGAGCA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
** * * * *
342429 TTCTAGTGCTGATCTTCATACATTTTT-TGATTAGGCACTATAAACACGTTGTCCTTATTAGGAT
195 TTCTAGTAATGATCTTCATTC-TTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * *
342493 AAATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* *
342558 AATTCATCCCATAATTATGA-AACCCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAG
324 AATTCATCCCATAATTATGACAA-GCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
*
342622 GAGCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
388 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
**
342687 TTTTCTTTCCATTGTTTTTGATAG
453 TTTTCTTTCCACCGTTTTTGATAG
* * *
342711 AAGTAAAGTTTGTCTCTTAAAAAAGACAAGAATGAATTCTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
342776 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTACGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
342841 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGACGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
342906 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *** * * * * * *
342971 ACAATATTGTTGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTGGTTTT-CATAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCT-ATTTTCCTTAATATCAAA
* * *
343035 ATTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTA
325 ATTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-
* * * * * * *
343097 GGAAGC-AA-AAGCACATTCCATTCATTAGGATACATAACATTGAAGCTTTGTTGTTGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
343160 ATGTTTTCTTTCCACCGTTTTTTATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
* * * *
343187 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCACTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
343251 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACAATATTGATTCTTTGGTCTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * *
343316 AAAGGGTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * *
343381 TTCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * *
343446 AATGATATTCACGATTTTCTTTTGCATGGAACTCTTTTATTT-CGCCTTTTTTCCTTAATATCAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAA
* *
343510 AATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* * * **
343575 AGCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTAACAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
* *
343640 TTTATTTCCACCATTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* *
343663 AAGTAAAGTTTGTCTCTTAAATAAGATAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
343728 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
343793 AAGGGTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
343858 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
343923 ACGATATTCACGATTTTCTTTTGCATGAAAATCTTTTCTTTGCGCTATTTTACTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*
343988 TTTATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
344053 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
* *
344118 TCTTGCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
** * * * *
344139 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
344204 GATTAGGCACCATTAACTTTGTCTACTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
344269 AAAAGG-TTTCCTGTCACCAAATTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
130 -AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
*
344333 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTC-TCCAGGA
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCAT-TAGGA
*
344397 TAAACGATATTCACGATTTTCTTTTGCATGGAAATATTTTCTTTGCGCTATTTTCCTTAATATCA
258 TAAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCA
344462 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
323 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
344527 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
388 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
*
344592 TTTTCTTTCCACCATTTTTGATAG
453 TTTTCTTTCCACCGTTTTTGATAG
** * * * *
344616 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
344681 GATTAGGCACCATCAGCTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
*
344746 AAAAGG-TTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
130 -AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
* *
344810 ATTCTAGTAATGATCTTCATTCTTTTTTTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* *
344875 AAATGATATTCACGATTTTCTTTTGTATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
*
344940 AATTCATCCCATAATTATGACAAACATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
345005 AGCTAAG-----A--------A-T-----ACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
* *
345051 TTTCTTTCCACCGTGTTCGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * * * *
345074 AAGTAAAGTTTGTGTCTTAAATAAGACAAACAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * * * * *
345139 ATTAGGGACCATAAACTTTGTCTTCTCAAAAAGATACACGATACTGATGCTTTGGTTTCCTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
345204 AAGGCTTTCTTGCCACTAATTTTCGTAAAGTCTAAGTTCGTGCCTCAAATGAGA-AAATG-GAGA
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAG-GA
* * * * *
345267 TTCTAGTAAGGATTTTTATTCTTTTTGTGATTAGGCACTATAAAAACATTCTCCTTATTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * * *
345332 AACAATTTTCACGGTTTTCTTTTGCAAGGAAATCTTTTCTTTGCGCAATTTTCCTTAATATAAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* * ** *
345397 AATCATCCCATAACTATGACAAGCATCGATTCTCGTTTGAGTCCCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
345462 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
345527 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
345549 AAGTAAAGTTTGTCTCTAAAATGAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * **
345614 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGAGGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
345679 AAGGCTTTCTTGCCACCAATTTTTTTAAACTCTAAGTTCGTGCCTCAAATGAAACTAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
345744 TGTAGTAACGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCT-GTTGAGGATA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AGGATA
*
345808 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAAAATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
*
345873 ATTCATCTCATAATTATGACAAG-ATCGATTCTC-TAAGAGTCTCCATTCTTTTCGAGATTAGGG
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATT-GGG
* *
345936 -GCTAAGAACACATTCCATTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
* *
346000 TTTTTTTCCTCCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
*
346023 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTTGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
346088 ATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * * * *
346152 AAAGGCTTTCTTATCACCAATTTTTGTAAACTCTAAGTTCATGCCTCCAATGAGGCAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * * * * *
346217 TTCTAGTACTG-TCTTCATACATTTTGTGATTAGGCACTATAAACACGTTGTCCTTACTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * *
346281 AATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* * *
346346 ATTCATCCCATAATTATGAAAACCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
346411 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGAAGCTTTAGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
**
346476 TTCTTTCCATTGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
346498 AAGTAAAGTTTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
346563 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
346628 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGACGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
346693 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * * * * *
346758 ACAATATTGATGATTTTATTTTCCGTTGAAATCTTTTCTTTGCACTGTTTTCCATAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
346823 TTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTAG
326 TTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-G
* * * *
346885 GAAGC-AA-AAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
346948 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * *
346974 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
*
347038 GATTAGGCACCATCAACTTTGTCTTCTCATCAA-AATACACGATATTGATTCTTTGGTTTCGTAA
65 GATTAGGCACCATCAACTTTGTCTTCTCAT-AAGGATACACGATATTGATTCTTTGGTTTCGTAA
* *
347102 GAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
129 GAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
*
347167 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
347232 AAATGATATTCACGATTTTCTTTTGTATGGAAATCTTTTCTTTGCGCTTTTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * *
347297 AATTCATACCATAATTATGACAAGCATCTATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
347362 AGCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
347427 TTTCTTTCCTCCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * *
347450 AATTAAAGTTCGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTTGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
347515 ATTAGGCACCCAT-AACTTTGTCTTCTCGTAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * * * *
347579 AAAGGCTTTCTTGTCACCAATTTTTGTAAACTCTAAGTTCGTACCTCCAATGAGTCAAACGAGGG
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
** * * * * *
347644 TTCTAGTGCTGATCTTCATACATTTTT-TGATTAGGCACTATAAACCCGTTGTCCTTATTAGGAT
195 TTCTAGTAATGATCTTCATTC-TTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
347708 AAATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTC-CTTTTTTTCCTTAATATCA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCA
* * *
347772 AAATTCATCCCATAATTATGAAAACCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAG
323 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
* * *
347837 GAGCTAAGAACACATTCCCTTCATTAGGATACATGACATTGAAGCTTTAGTGTCGCAAGAAAATG
388 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
**
347902 TTTTCTTTCCATTGTTTTTGATAG
453 TTTTCTTTCCACCGTTTTTGATAG
* * *
347926 AAGTAAAGTTTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCGATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
347991 ATTAGGCCCCGTCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
348056 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGACGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
348121 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * * * *
348186 ACAATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTGTTTTCCATAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
348251 TTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTAG
326 TTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-G
* * * *
348313 GAAGC-AA-AAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
348376 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * *
348402 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
*
348466 GATTAGGCACCATCAACTTTGTCTTCTCATCAA-AATACACGATATTGATTCTTTGGTTTCGTAA
65 GATTAGGCACCATCAACTTTGTCTTCTCAT-AAGGATACACGATATTGATTCTTTGGTTTCGTAA
* * *
348530 GAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGGCAAATGAGG
129 GAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
*
348595 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
348660 AAATGATATTCACGATTTTCTTTTGTATGGAAATCTTTTCTTTGCGTTTTTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* *
348725 AATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
348790 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
348855 TTTCTTTCCACCATTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* *
348878 AAGTAAAGTTTGTCTCTAAAATGAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * **
348943 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGAGGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
349008 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAAACTAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* *
349073 TCTAGTAACGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCT-GTTGAGGATA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AGGATA
*
349137 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAAAATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
*
349202 ATTCATCTCATAATTATGACAAG-ATCGATTCTC-TAAGAGTCTCCATTCTTTTCGAGATTAGGG
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATT-GGG
* *
349265 -GCTAAGAACACATTCCATTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
349329 TTTCTTTCCTCCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
*
349352 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTTGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
349417 ATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * * * *
349481 AAAGGCTTTCTTATCACCAATTTTTGTAAACTCTAAGTTCATGCCTCCAATGAGGCAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * * * * *
349546 TTCTAGTACTG-TCTTCATACATTTTGTGATTAGGCACTATAAACACGTTGTCCTTACTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * *
349610 AATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* * *
349675 ATTCATCCCATAATTATGAAAACCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
349740 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGAAGCTTTAGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
**
349805 TTCTTTCCATTGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
349827 AAGTAAAGTTTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
349892 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
349957 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGACGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
350022 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * * * * *
350087 ACAATATTGATGATTTTATTTTCCGTTGAAATCTTTTCTTTGCACTGTTTTCCATAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
350152 TTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTAG
326 TTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-G
* * * *
350214 GAAGC-AA-AAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
350277 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * *
350303 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
*
350367 GATTAGGCACCATCAACTTTGTCTTCTCATCAA-AATACACGATATTGATTCTTTGGTTTCGTAA
65 GATTAGGCACCATCAACTTTGTCTTCTCAT-AAGGATACACGATATTGATTCTTTGGTTTCGTAA
* *
350431 GAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
129 GAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
*
350496 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
350561 AAATGATATTCACGATTTTCTTTTGTATGGAAATCTTTTCTTTGCGCTTTTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
*
350626 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCAAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
350691 AGCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
350756 TTTCTTTCCTCCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * *
350779 AATTAAAGTTCGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTTGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
350844 ATTAGGCACCCAT-AACTTTGTCTTCTCGTAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * * *
350908 AAAGGCTTTCTTGTCACCAATTTTTGTAAACTCTAAGTTCGTACCTCCAATGAGTCAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
** * * * * *
350973 TTCTAGTGCTGATCTTCATACATTTTT-TGATTAGGCACTATAAACCCGTTGTCCTTATTAGGAT
195 TTCTAGTAATGATCTTCATTC-TTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
351037 AAATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTC-CTTTTTTTCCTTAATATCA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGC-TATTTTCCTTAATATCA
* * *
351101 AAATTCATCCCATAATTATGAAAACCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAG
323 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
* * *
351166 GAGCTAAGAACACATTCCCTTCATTAGGATACATGACATTGAAGCTTTAGTGTCGCAAGAAAATG
388 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
**
351231 TTTTCTTTCCATTGTTTTTGATAG
453 TTTTCTTTCCACCGTTTTTGATAG
* * *
351255 AAGTAAAGTTTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCGATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
351320 ATTAGGCCCCGTCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
351385 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGACGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
351450 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * * * *
351515 ACAATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTGTTTTCCATAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
351580 TTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTAG
326 TTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-G
* * * *
351642 GAAGC-AA-AAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
351705 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * *
351731 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
*
351795 GATTAGGCACCATCAACTTTGTCTTCTCATCAA-AATACACGATATTGATTCTTTGGTTTCGTAA
65 GATTAGGCACCATCAACTTTGTCTTCTCAT-AAGGATACACGATATTGATTCTTTGGTTTCGTAA
* * *
351859 GAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGGCAAATGAGG
129 GAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
*
351924 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
351989 AAATGATATTCACGATTTTCTTTTGTATGGAAATCTTTTCTTTGCGTTTTTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * *
352054 AATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGATTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
*
352119 AGCTAAGAACACATTCCCTTCATTAGGAAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
352184 TTTCTTTCCTCCGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* *
352207 AATTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTTGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
352272 ATTAGGCACCCAT-AACTTTGTCTTCTCGTAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
66 ATTAGGCA-CCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * *
352336 AAAGGCTTTCTTGTCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGTCAAACGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
** * * * * *
352401 TTCTAGTGCTGATCTTCATACATTTTT-TGATTAGGCACTATAAACCCGTTGTCCTTATTAGGAT
195 TTCTAGTAATGATCTTCATTC-TTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * *
352465 AAATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* * *
352530 AATTCATCCCATAATTATGA-AACCCATCGATTCTCGTAAGAGTTTCCATTCTTTTCGAGATTAG
324 AATTCATCCCATAATTATGACAA-GCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
* *
352594 GAGCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAAAATG
388 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
*
352659 TTTTCTTTCCACTGTTTTTGATAG
453 TTTTCTTTCCACCGTTTTTGATAG
* * * *
352683 AAGTAAAGTCTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCAATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
352748 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
352813 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGACGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
352878 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * * * *
352943 ACAATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCACTGTTTTCCATAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
353008 TTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTCGAGATTAG
326 TTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-G
* * * *
353070 GAAGC-AA-AAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
387 GGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
353133 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * * *
353159 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCACTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * *
353223 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACAATATTGATTCTTTGGTCTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * *
353288 AAAGGGTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* * * *
353353 TTCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * *
353418 AATGATATTCACGATTTTCTTTTGCATGGAACTCTTTTATTT-CGCCTTTTTTCCTTAATATCAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAA
* *
353482 AATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
353547 AGCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
353612 TTTCTTTCCACTGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * *
353635 AAGTAAAGTCTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
353700 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
353765 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
353830 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
353895 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* *
353959 ATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
354024 GCTAAGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
354089 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * *
354111 AAGTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * * *
354176 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCATACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
354241 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
354306 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
*
354371 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA-A
*** *
354436 A-TCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
354500 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
354565 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
354587 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
354652 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
354717 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
354782 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGAACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
354847 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* *
354911 ATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
354976 GCTAAGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
355041 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
355063 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
355128 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
355193 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
355258 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
355323 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* *
355387 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
355452 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
355517 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
355539 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
355604 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
355669 AAGGCTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
355734 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
355799 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* *
355864 TTCATCCCATAATTATGA-AACCCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAGGA
326 TTCATCCCATAATTATGACAA-GCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* *
355928 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
355993 TTCTTTCCACTGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * * * *
356015 AAGTAAAGTCTGTCTCTTAAAAAAAACAAGCATGAATTCTCATGCTAGTCCCAATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
356080 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
356145 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
356210 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * * * *
356275 ACAATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTCGCAC-AGTTTTCCATAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTA-TTTTCCTTAATATCAAA
* * * *
356339 ATTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTTGAGATTA
325 ATTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-
* * * * *
356401 GGAAGC-AAAAACACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAA
386 GGGAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAA
*
356465 TGTTTTCTTTCCACCGTTTTTTATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * * *
356491 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCACTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
356555 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACAATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
356620 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
356685 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
356750 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTACGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* *
356815 ATTCATCCCATAATTATGACAAGCATCGATTCTCATAAGAGTCTCCATTCTTTTTGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
356880 GCTAAGAACACAATCACTTCATTAGGAAACATGACATTGATACTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
356945 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * * *
356967 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
357032 GATTAGGCACCATTAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* **
357097 AAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
357162 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
357227 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTACTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
357292 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
357357 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTA
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
357422 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
357444 AAGTAAAGTTTGTCTCTTAAATAAGACAACCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
357509 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
357574 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
357639 TCTTGTAGTGATCTTCATTCTTTCTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * *
357704 ATGATATTCATGAATTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
357768 ATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCTAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
357833 GTTAAGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
357898 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * *
357920 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
357985 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
358050 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* *
358115 TCTAGTAATGATCTTCATTCTTTTTGTGAGTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
358180 ACGATATTCATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** * *
358245 TTCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTCTCCATTCGTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
*
358310 CTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
358375 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* *
358396 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
358461 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
358526 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
358591 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * *
358656 ATGATATTCACGATTTTGTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* *
358720 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
358785 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* * *
358850 TTATTTCCACCATTTTTTATAG
455 TTCTTTCCACCGTTTTTGATAG
* * *
358872 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTCGTCCCCGTTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
358937 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
359002 AAGGCTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
359067 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
359132 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * * *
359197 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCCTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* * *
359262 TTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
359327 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * *
359348 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
359413 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGACATTGGTTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
359478 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * * *
359543 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATACACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
359608 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCT-TCTTTCCTTAATATCAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTAT-TTTCCTTAATATCAA
* *
359671 AATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
359736 AGCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
359801 TTTCTTTCCACTGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * * *
359824 AAGTAAAGTCTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCAATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
359889 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * *
359954 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAAACAAACGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
360019 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * *
360084 ACAATATTGATGATTTTCTTTTCCATTGAAATCTTTTCTTTGCAC-AGTTTTCCATAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTA-TTTTCCTTAATATCAAA
* * * *
360148 ATTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTTGAGATTA
325 ATTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-
* * * *
360210 GGAAGC-AA-AAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
360273 ATGTTTTCTTTCCACCGTTTTTTATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
* * * *
360300 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCACTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
360364 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACAATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
360429 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
360494 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
360559 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* *
360624 ATTCATCCCATAATTATGACAAGCATCGATTCTCATAAGAGTCTCCATTCTTTTTGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
360689 GCTAAGAACACATTCACTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
360754 TTCTTTCCACCATTTTTGATGG
455 TTCTTTCCACCGTTTTTGATAG
** * * * *
360776 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
360841 GATTAGGCACCATTAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* **
360906 AAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
360971 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
361036 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTACTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
361101 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
361166 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTA
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
361231 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
361253 AAGTAAAGTTTGTCTCTTAAATAAGACAACCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
361318 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
361383 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
361448 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
361513 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
361577 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
361642 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
361707 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
361729 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCCTTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
361794 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
361859 AAGACTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
361924 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
361989 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * * *
362054 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCCTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* * *
362119 TTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
362184 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * *
362205 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
362270 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGAAACACGACATTGGTTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
362335 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGGGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
362400 TCTAGTGATGATCTTCATTCTTTTTGTGATTAGGCACAATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
362465 ACGGTATTCACGATTTTTTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATAACAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
362530 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
362595 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
362660 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
362681 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
362746 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
362811 ATGGCTTTCTTGTCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
362876 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
362941 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
363005 ATTCATCCCATAATTAAGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
363070 GCTACGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
363135 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * ** * * *
363157 AAGTAAAGTTTGACCCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
363222 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * * *
363287 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCCTGCCTCAAATGAGACAATTAAGGGT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
363352 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
363417 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** * * *
363482 TTCATATTATAATTATGAAAAGCATAGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
*
363547 CTAAGAACACATTCCCTCCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
363612 TCTTTCCACCAG-ATTTGATAG
456 TCTTTCCACC-GTTTTTGATAG
* ** * * * *
363633 ATGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * * * *
363698 GATTAGGCACCATAAATTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGATTTCATAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * * *
363763 AAAGGCTTTCTTGCCACCATTTTTTGTAAAGTCTAAGTTCGTACCTCAAATGGGAGAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* *
363828 TTCCT-GTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGAT
195 TT-CTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
363892 AAATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCA
* *
363956 AAATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAG
323 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
* *
364021 GAGCTAAGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
388 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
364086 TTTTCTTTCCACCGTTTTTGATAG
453 TTTTCTTTCCACCGTTTTTGATAG
* ** * * *
364110 AAGTAAAGTTTGCCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
364175 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
364240 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
364305 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
364370 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
364434 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCATTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
364499 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTGGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
364564 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
364586 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
364651 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
364716 AAGGCTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * **
364781 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTTTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * *
364846 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
364911 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* *
364976 CTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
365041 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * * *
365062 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCTCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
365127 ATTAGGCACCATAAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
365192 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
365257 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
365322 ACGATATTCATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** *
365387 TTCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
*
365452 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTAT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
365517 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
365538 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
365603 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
365668 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
365733 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
365798 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
365862 ATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
365927 GCTAAGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
365992 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * *
366014 AAGTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
366079 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
366144 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
366209 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
*
366274 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA-A
*** * *
366339 A-TCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTTTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
366403 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
366468 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * *
366490 AAGTAAGGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
366555 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
366620 AGGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
366685 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
366750 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
366814 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
366879 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
366944 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
366966 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCCTTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
367031 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
367096 AAGACTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
367161 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
367226 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * * *
367291 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCCTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* * *
367356 TTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
367421 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * *
367442 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
367507 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGAAACACGACATTGGTTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
367572 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGGGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
367637 TCTAGTGATGATCTTCATTCTTTTTGTGATTAGGCACAATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
367702 ACGGTATTCACGATTTTTTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATAACAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
367767 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
367832 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
367897 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
367918 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
367983 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
368048 ATGGCTTTCTTGTCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
368113 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
368178 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
368242 ATTCATCCCATAATTAAGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
368307 GCTACGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
368372 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * ** * * *
368394 AAGTAAAGTTTGACCCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
368459 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * * *
368524 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCCTGCCTCAAATGAGACAATTAAGGGT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
368589 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
368654 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** * * *
368719 TTCATATTATAATTATGAAAAGCATAGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
368784 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
368849 TCTTTCCACCAG-ATTTGATAG
456 TCTTTCCACC-GTTTTTGATAG
* ** * * * *
368870 ATGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* * * * *
368935 GATTAGGCACCATAAATTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGATTTCATAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* * * * *
369000 AAAGGCTTTCTTGCCACCATTTTTTGTAAAGTCTAAGTTCGTACCTCAAATGGGAGAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* *
369065 TTCCT-GTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAGGAT
195 TT-CTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
369129 AAATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCA
* *
369193 AAATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAG
323 AAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
* *
369258 GAGCTAAGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
388 GAGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG
369323 TTTTCTTTCCACCGTTTTTGATAG
453 TTTTCTTTCCACCGTTTTTGATAG
* ** * * *
369347 AAGTAAAGTTTGCCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
369412 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
369477 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* *
369542 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCTTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * *
369607 ACGATATTCATGATTTTCTTTTGCATGGAAAGCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** * * *
369672 TTCATATTATAATTATGACAACCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* * *
369737 CTAAGAACAAATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
369802 TCTTTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * *
369823 AAGTAAAGTTTGCCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
*
369888 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
369953 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
370018 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
*
370083 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA-A
*** * *
370148 A-TCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTTTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
370212 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
370277 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * *
370299 AAGTAAGGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
370364 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
370429 AGGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
370494 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
370559 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
370623 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
370688 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
370753 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
370775 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCCTTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
370840 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
370905 AAGACTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
370970 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
371035 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
371100 TTTATCCCATAATTATGAC-AGCCATCGATTCTCGTAAGAGTCTCCATTCCTTTCGAGATTAGGA
326 TTCATCCCATAATTATGACAAG-CATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
371164 GTTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
371229 TTCTGTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* ** * * *
371251 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
371316 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGAAACACGACATTGGTTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
371381 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGGGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
371446 TCTAGTGATGATCTTCATTCTTTTTGTGATTAGGCACAATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
371511 ACGGTATTCACGATTTTTTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATAACAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
371576 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
*
371641 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTAT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
371706 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
371727 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
371792 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
371857 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
371922 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
371987 ACGATATTCATGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
372051 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCATTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
372116 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTGGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
372181 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
372203 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
372268 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
372333 AAGGCTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * **
372398 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTTTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * *
372463 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * *
372528 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* *
372593 CTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
372658 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * * *
372679 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCTCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
372744 ATTAGGCACCATAAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
372809 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
372874 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
372939 ACGATATTCATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** *
373004 TTCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
*
373069 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTAT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
373134 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
373155 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
373220 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
373285 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCTAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
373350 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
373415 ACGATATTCATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** *
373480 TTCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
*
373545 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTAT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
373610 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
373631 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
373696 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
373761 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
373826 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
373891 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
373955 ATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
374020 GCTAAGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGTGTCGAAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
374085 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * *
374107 AAGTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
374172 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
374237 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
374302 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
**
374367 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGTACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA-A
*** *
374432 A-TCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
374496 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
374561 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* *
374583 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
374648 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
374713 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTGGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
374778 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
374843 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* *
374907 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
374972 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
375037 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
375059 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
375124 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
375189 AAGGCTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
375254 CCTAGTAATTATCTTCATTC-TTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
375318 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * * *
375383 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCCTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* * *
375448 TTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
375513 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * *
375534 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
375599 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGACATTGGTTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
375664 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGGGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* *
375729 TCTAGTGATGATCTTCATTC-TTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
375793 ACGGTATTCACGATTTTTTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATAACAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
375858 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
375923 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
375988 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* **
376009 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCACAAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
376074 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
376139 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
376204 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* *
376269 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCT-TCTTTCCTTAATATCAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTAT-TTTCCTTAATATCAA
* *
376332 AATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGG
324 AATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGG
* *
376397 AGCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAAAATGT
389 AGCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGT
*
376462 TTTCTTTCCACTGTTTTTGATAG
454 TTTCTTTCCACCGTTTTTGATAG
* * * *
376485 AAGTAAAGTCTGTCTCTTAAAAAAGACAAGCATGAATTCTCATGCTAGTCCCAATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
376550 ATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
376615 AAGGCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAATGAGACAAACGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
** * * *
376680 TCTAGTGCTGATCTTCATACATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * * * *
376745 ACAATATTGATGATTTTCTTTTCCGTTGAAATCTTTTCTTTGCAC-AGTTTTCCATAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTA-TTTTCCTTAATATCAAA
* * * *
376809 ATTCAT-CCATTAAATATGACAAGCATCAATTCTC-AAAGAAGTCTCCACTT-TTTTTGAGATTA
325 ATTCATCCCA-TAATTATGACAAGCATCGATTCTCGTAAG-AGTCTCCA-TTCTTTTCGAGATT-
* * * *
376871 GGAAGC-AA-AAGCACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAA
386 GGGAGCTAAGAA-CACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAA
*
376934 ATGTTTTCTTTCCACCGTTTTTTATAG
450 ATGTTTTCTTTCCACCGTTTTTGATAG
* * * *
376961 AAGTAAAGTTTGTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCTAATCCCCACTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
377025 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACAATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
377090 AAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
377155 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
377220 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
* *
377285 ATTCATCCCATAATTATGACAAGCATCGATTCTCATAAGAGTCTCCATTCTTTTTGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
377350 GCTAAGAACACATTCACTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
377415 TTCTTTCCACCATTTTTGATGG
455 TTCTTTCCACCGTTTTTGATAG
** * * * *
377437 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
377502 GATTAGGCACCATTAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* **
377567 AAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
377632 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
377697 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTACTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
377762 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
377827 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTA
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
377892 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
377914 AAGTAAAGTTTGTCTCTTAAATAAGACAACCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
377979 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
378044 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
378109 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
378174 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
378238 ATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
378303 GCTAAGAACACATTCCCTTCGTTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
378368 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * *
378390 AAGTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
378455 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
378520 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
378585 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
*
378650 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA-A
*** * *
378715 A-TCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTTTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
378779 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
378844 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * *
378866 AAGTAAGGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
378931 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
378996 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
379061 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
379126 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
379190 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
379255 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
379320 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
379342 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
379407 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
379472 AAGACTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
379537 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
379602 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * * *
379667 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCCTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* * *
379732 TTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
379797 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * *
379818 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
379883 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGAAACACGACATTGGTTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
379948 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
380013 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
380078 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* *
380143 TTCATCCCATAATTATGACAAGCATCGATTCTCATAAGAGTCTCCATTCTTTTTGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
*
380208 CTAAGAACACATTCACTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
* *
380273 TCTTTCCACCATTTTTGATGG
456 TCTTTCCACCGTTTTTGATAG
** * * * *
380294 AAGTAAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
* *
380359 GATTAGGCACCATTAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* **
380424 AAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
*
380489 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
195 TTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
380554 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTACTTAATATCAAA
260 AACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAA
380619 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
380684 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTA
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
380749 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
380771 AAGTAAAGTTTGTCTCTTAAATAAGACAACCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
380836 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * *
380901 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
380966 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
381031 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
381095 ATTCATCCCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * *
381160 GCTAAGAACACATTCCCTTCGTTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
381225 TTCTTTCCACCGTTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
** * * *
381247 AAGTAAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
381312 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
381377 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
381442 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
*
381507 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAATATCAAGA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA-A
*** * *
381572 A-TCATATTATAATTATGACAAGCATAGATTCTCGTAAGAGTTTCCATTCTTTTCGAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
*
381636 GCTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
381701 TTCTTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
* * *
381723 AAGTAAGGTTTGTCTCTTAAATAAGACAGGCACGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
381788 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACAATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* *
381853 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
381918 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTTTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
381983 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
382047 ATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCAAGATTGGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
382112 GCTAAGAACACATTCCGTTCATTAGGAAACATGGCATTGATGCTTTAGTGTCACAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
* *
382177 TTATTTCCACCATTTTTGATAG
455 TTCTTTCCACCGTTTTTGATAG
*
382199 AAGTAAAGTTTGTCTCTTAAATAAGACAGGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* *
382264 ATTAGGCTCCATCAACTTTGTTTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
382329 AAGACTTTCTTGTCACCAATTTTTGTAAAATCTAAGTTCGTGCCTCAAATAAGACAAGTGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * * *
382394 CCTAGTAATTATCTTCATTCTTTTTGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
382459 ATGATATTCGCGATTTTCTTTTGCATGGAAATCTTTTATTTTCCCTTTTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
* * * *
382524 TTTATCCCATAATTATGACAACCATCGATTCTCGTAAGAGTCTCCATTCCTTTCGAGATTAGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
* * *
382589 TTAAGAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
382654 TCTGTCCACCGTTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
* ** * * *
382675 AAGTAAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
382740 ATTAGGCACCATAAACTTTGTCTTCTCATAAGGAAACACGACATTGGTTCTTTGGTTTCGTAAGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
*
382805 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGGGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
382870 TCTAGTGATGATCTTCATTCTTTTTGTGATTAGGCACAATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
382935 ACGGTATTCACGATTTTTTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATAACAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*
383000 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGACTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
383065 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
391 CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
*
383130 TCTTTCCACCATTTTTGATAG
456 TCTTTCCACCGTTTTTGATAG
383151 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * *
383216 ATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTAGTAAGT
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * *
383281 ATGGCTTTCTTGTCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATGGGAGAAATGAGGAT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
* * *
383346 TCTTGTAGTGATCTTCATTCTTTTTGTGATTAGGGACTATAAACACATTCTCCTCATTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
383411 ATGATATTCACGATTTTCTTTTGCATGGAAATCTTTTATTT-CGCCTTTTTTCCTTAATATCAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATATCAAA
* * *
383475 ATTCATCCCATAATTAAGACAAGCATCGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTAGGA
325 ATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGA
* * * *
383540 GCTACGAACACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGTTGTCGCAAGAAAATGTT
390 GCTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
383605 TTCTTTTCCACCGTTTTTGATAG
455 TTC-TTTCCACCGTTTTTGATAG
* * ** * * *
383628 AAGTAAAGTTTGACCCTTAAAT-AGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
383692 ATTAGGCACCATAAACTTTGTCTTCTCATAAAGATACATGATATTGATTCTTTGGTTTCGTACGA
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
* * * * * *
383757 AAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCCTGCCTCAAATGAGACAATTAAGGGT
131 AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
*
383822 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
196 TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
383887 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
261 ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
*** * * *
383952 TTCATATTATAATTATGAAAAGCATAGATTCTCCTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
326 TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
384017 CTAAGAACACCATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-T
391 CTAAGAACA-CATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTT
*
384081 TTCTTTCCACCAG-ATTTGATAG
455 TTCTTTCCACC-GTTTTTGATAG
* ** * * * *
384103 ATGTAAAGTTTGTCTCTTAAATAAGACAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTCATG
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
* * * *
384168 ATTAGGCACCAT-AAATTTGTCTTCTC-TAAGGATACACGATTATTGATGCTTTGATTTCATAAG
66 ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGA-TATTGATTCTTTGGTTTCGTAAG
* * * * *
384231 AAAGGCTTTCTTGCCACCATTTTTTGTAAAGTCTAAGTTCGTACCTCAAATGGGAGAAATGAGGA
130 AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGA
* *
384296 TTCCT-GTAGTGATCTTCATTCTTTTTGTGATTAGGTACTATAAACACACATTCTTCCTCATTAG
195 TT-CTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTAT-AA-ACACATTC-TCCTCATTAG
* * * *
384360 GCTAAATGATATTCACGATTTTCTTTTGCATGGAAATC-TTTATTT-CGCCTTTTTTCCTTAATA
256 GATAAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCG-CTATTTTCCTTAATA
*
384423 TCAAAATTCATCCCATAATTATGGAC-AGCATCGATTCTCCT-AGAGTCTCC-TTCTTTTCGAGA
320 TCAAAATTCATCCCATAATTAT-GACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGA
* * * * *
384485 TTAGGAGCAAAG-ACACATTCCCTTCCTTAGGATACCATGACATTGATGCTTT-TTGTCGCAAGA
384 TTGGGAGCTAAGAACACATTCCCTTCATTAGGA-AACATGACATTGATGCTTTGGTGTCGCAAGA
*
384548 AAATGTTTTTCTTTCCACCGTTTTTAATAG
448 AAATG-TTTTCTTTCCACCGTTTTTGATAG
* ** * * *
384578 AACGTAAAGTTTGCCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCAT
1 AA-GTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCAT
384643 GATTAGGCACCATCAAC-TTGTCTTCTCAT-AGGATACACGATATTGATTCTTTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAG
* *
384706 AAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGAC-AATGAGG
130 -AAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
* *
384770 ATTCTAGTAATGATCTTCATTC-TTTTGTG-TTAGGCACTATAAACACATTCTCTTCTTTA-GAT
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
384832 AAACGATATTCATGATTTTCTTTTGCATGG-AAGCTTTTCTTTGCACTATTTT-CTTAATATCAA
259 AAACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAA
* ** * * * *
384895 GATTCATATTC-TAATTATGACAACCATCGATTCTCCTACGAGTCTCCATTCTTTTCGAGA-TAG
324 AATTCAT-CCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGG
* * * * *
384958 GAGCT-AGAAACACATTTCCTTCCTTCGGATACATGACATTGATGCTTTGGTGTCGCCAGAAAAA
388 GAGCTAAG-AACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAG-AAAA
385022 TGTTTTC-TTCCA-CGTTTTTGATAG
451 TGTTTTCTTTCCACCGTTTTTGATAG
* * * *
385046 AAGTAAAG-TTGCCTCTTAAATAAGACAA--ATAAGATTGTCATGCTAATCCCCATTCTTTTCAT
1 AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGA-ATTGTCATGCTAGTCCCCATTCGTTTCAT
*
385108 GATTAGGCACCATCAACTTTGTCTTCTCATCAGGATACACGATA-TGATTC-TTGGTTTCGTAAG
65 GATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAA-
* *
385171 GAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
129 GAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGG
* *
385236 ATTCTAGTAATGATCTTCATTCTTTTTGTGCTTAGGCACTATTAAA-AGCATTCTCCTCTTTAGG
194 ATTCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTA-TAAACA-CATTCTCCTCATTAGG
* *
385300 ATAAACGATATTCACGATTTTC-TTTGCATGGAACATCTTTTATTT-CGCCTTTTTTCCTTTAAT
257 ATAAACGATATTCACGATTTTCTTTTGCATGGAA-ATCTTTTCTTTGCG-CTATTTTCC-TTAAT
* * *
385363 ATCAAAAATTCATACCATAATTATGACAAGCATCGATTCTCCTAAGAGTCTCCATTCATTTCGAG
319 ATC-AAAATTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAG
* * * *
385428 ATTGGGAGCTAAGAAAACATTCCGTTCATTAGGAAAAACATGGCATTGATTGCTTTGGTGTCACA
383 ATTGGGAGCTAAGAACACATTCCCTTCATTAGG--AAACATGACATTGA-TGCTTTGGTGTCGCA
385493 AG
445 AG
Statistics
Matches: 60633, Mismatches: 4922, Indels: 1061
0.91 0.07 0.02
Matches are distributed among these distances:
455 7 0.00
456 429 0.01
457 298 0.00
458 81 0.00
461 2 0.00
462 2 0.00
463 1 0.00
464 4 0.00
465 116 0.00
466 68 0.00
467 29 0.00
468 69 0.00
469 108 0.00
470 76 0.00
471 32 0.00
472 5 0.00
473 303 0.00
474 1424 0.02
475 6555 0.11
476 42413 0.70
477 8153 0.13
478 458 0.01
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.37
Consensus pattern (476 bp):
AAGTAAAGTTTGTCTCTTAAATAAGACAAGCATGAATTGTCATGCTAGTCCCCATTCGTTTCATG
ATTAGGCACCATCAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAAGA
AAGGCTTTCTTGTCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATGAGGAT
TCTAGTAATGATCTTCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
ACGATATTCACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCGCTATTTTCCTTAATATCAAAA
TTCATCCCATAATTATGACAAGCATCGATTCTCGTAAGAGTCTCCATTCTTTTCGAGATTGGGAG
CTAAGAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGCAAGAAAATGTTT
TCTTTCCACCGTTTTTGATAG
Found at i:329548 original size:159 final size:157
Alignment explanation
Indices: 318933--333370 Score: 1146
Period size: 159 Copynumber: 91.1 Consensus size: 157
318923 CATTCTTTTC
318933 AAGT-AAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCCAATCCCCATTCTTTTCAT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATG-CAATCCCCATTCTTTTCAT
* *
318997 GATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACATAATATTGATTG-TTTGGTTTCGTAA
65 GATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGA-TGCTTTGGTTTCGTAA
* **
319061 GAAAGGCTTTCTTGT-CACCAATTTTTGCA
129 GAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * ** * * * * * **
319090 AAGTCTAAGTTCGTGC-CTCAAATGTGGCAAACAAGGATTCTAAT--AATGGTCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCAA---TCCCCATTCTTTT
** * * ** * * * * * ** * *
319152 TGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTGC
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* **
319216 AAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
127 AA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * * *
319249 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-TTTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTCTTTT
* * * * * *
319310 CGA-GATT-GGGAGC-TAAGAACATATT-CCAT-TCATTAGGAAACATGACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-T-TTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * * *
319370 GTCGCAAGAAAATGTTTTCTTTCCATCGTTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
319407 GAAGT-AAAGTTTGTT-TCTTAAATAGGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * * *
319469 CATGATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* *
319534 AAGAAAGGCTTTCTTGT-CACCAATTTTTGTA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
319565 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--ATCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTT
** * * * * * * * * ** *
319627 TGTGATTAGGCACTATAAACACATTATC--CTCATTAGGATAAACGATATTCACGATTTTCTTTT
62 CATGATTAGGCACCAT-AA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC
* * **
319690 GCAAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
125 GTAA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * *
319725 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCGATTCTTGT-AAG-ACTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGA--ATTGTCATGCAATCCCCATTCTTTT
* * * * *
319786 CGA-GATT-GGGAGC-TAAGAACATTT-TC-CCTTCATTAGGAAACATGACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-TTTGTCTTC-TCATTAGGATACATGATATTGATGCTTTGGT
* * * * *
319846 GTCGCAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * *
319883 GAAGT-AAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * * *
319947 TGATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTAA
* * * *
320012 AAAATGG-TTTCTTGCCACCAATTTTTGTA
129 GAAA-GGCTTTCTTTCCACCATTTTTTATA
* * * * * * * ** *
320041 AAGTCTAAGTTCGTGC-CTTAAATGAGACAAACGAGGATTCTAGTAATG--ATCTTCATATATTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCAT-TCTTT
* * ** * * * * * **
320103 T-GTGATTAGGCACTATAAAC-ACGTTCTCCTCATTAGTATAAACGATATTGATGATTTTCTTTT
61 TCATGATTAGGCACCATAAACTTTG-TCTTCTCATTAGGATACATGATATTGATG-CTTTGGTTT
* * * * **
320166 CCGT-TGAAA-TCTTTTCTTTGCACTATTTTCCATA
124 -CGTAAGAAAGGC-TTTCTTTCCACCATTTTTTATA
* ** * * ** * * *
320200 ATA-TCAAAATTCATCCCTTAAATATGAC-AAGCATCAATTCTCAT-AATAGTCTCCACTT-TTT
1 A-AGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCA-A-TCCCCA-TTCTTT
* * * * * * *
320261 ACGA-GATTAGGAAGCAAAAGCACATT-CCTT-TCATTAGGATACATGACATTGATGCTTTGGTG
61 TC-ATGATTAGGCACCATAA--ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT-
* * * * *
320323 TT-GCAAGAAAATGTTTTCTTTCCACCGTTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * * * *
320359 GAAGT-AAAGTTTGTCTCTTAACTAAGAC-AAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * * *
320422 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTTATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* *
320487 AGAAAGGCTTTCTTGT-CACCAATTTTTGTA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
320517 AAGTCTAACTTCGTGC-CTCAAATGAGACAAATGAGGATTCTTGT-AGTG--ATCTTCATTCTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGA--ATTGTCA-TGCAATCCCCATTCTTT
** * * ** * * * * * * ** *
320578 TTGTGATTAGGTACTATAAACACAT-TCTCCTCATTAGGATAAACGATATTCACGATTTTCTTTT
61 TCATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC
* * * **
320642 GCATGGAAA-TCTTTTCTTTTCC-CCTATTTCCT-TA
125 GTA-AGAAAGGC-TTTC-TTTCCACC-ATTTTTTATA
** * ** * * * * * * * * * *
320676 ATTTCAAAATTCATCCCATAATTACGAC-AAGCATCG-ATTCTCGTAACAGTCTCCATTCTTTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTCAT-GCAATCCCCATTCTTTTC
* * * * * * * *
320739 GA-GATT-GGGAGCTAAGAACACATTGGC-T-TCATAAGGATACATGACATTGATGCTTTGGATT
63 -ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * ** *
320800 CGCAAGAAAATGTTTTCTTTCCACTGTTTTTGATA
124 CGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
320835 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
320898 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * **
320963 AGAAAGGCTTTCTTGT-CGCCAATTTTTGCA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* ** ** * ** * * * * **
320993 AAGTCTAAGTTCATGACTCAAATGTGGCAAACG-AGGATTCTAAT--AATGGTCTTCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAA-GAAGAATTGTCATGCAA---TCCCCATTCTTTT
** * * ** * * * * * ** * *
321055 TGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTGC
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* **
321119 AAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
127 AA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * *
321152 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCGATTCTTGT-AAG-ACTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGA--ATTGTCATGCAATCCCCATTCTTTT
* * * * ** * * *
321213 CGA-GATT-GGGAGCTAAGAACACATTCCCTT-T-ATTAGGAAACATGACATTGATGCTTTGGTG
62 C-ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * *
321274 TCGTAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * *
321310 GAAGT-AAAGTTTGTCTCTT-AATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * * *
321373 TGATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTAA
* * * *
321438 AAAATGG-TTTCTTGCCACCAATTTTTGTA
129 GAAA-GGCTTTCTTTCCACCATTTTTTATA
* * * * * * * * ** *
321467 AAGTCTAAGTTCGTGC-CTTAAATGAGACAGACGAGGATTCTAGTAATG--ATCTTCATATATTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACA-AAGAAGAAT-T-GTCATGCAATCCCCAT-TCTTT
* * ** * * * * **
321529 T-GTGATTAGGCACTATAAAC-ACGTTCTCCTCATTAGGATAAACGATATTGATGATTTTCTTTT
61 TCATGATTAGGCACCATAAACTTTG-TCTTCTCATTAGGATACATGATATTGATG-CTTTGGTTT
* * * * **
321592 CCGT-TGAAA-TCTTTTCTTTGCACTATTTTCCATA
124 -CGTAAGAAAGGC-TTTCTTTCCACCATTTTTTATA
* ** * * ** * * *
321626 ATA-TCAAAATTCATCCCTTAAATATGAC-AAGCATCAATTCTCAT-AATAGTCTCCACTT-TTT
1 A-AGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCA-A-TCCCCA-TTCTTT
* * * * * * * * * *
321687 ACGA-GATTAGGAAGCAAAAACACATT-CCAT-TCATTAGGAAACATGACATTGATGCTTTGGTG
61 TC-ATGATTAGGCA-CCATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * * *
321749 TCGCAAGAAAATGTTTTCTTTCCACCGTTTTTGATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * * * *
321785 GAAGT-AAAGTTTGTCTCTTAACTAAGAC-AAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * * *
321848 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTTATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * *
321913 AGAAAGGCTTTCTTGT-TACCAATTTTTGTA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * **
321943 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTTGT-AGTG--ATCTTCATTCTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGA--ATTGTCA-TGCAATCCCCATTCTTT
** * ** ** * * * * * * ** *
322004 TTGTGATTAGGTACTTTAAACACAT-TCTCCTCATTAGGATAAACGATATTCACGATTTTCTTTT
61 TCATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC
* * * **
322068 GCATGGAAA-TCTTTTCTTTTCC-CCTATTTCCT-TA
125 GTA-AGAAAGGC-TTTC-TTTCCACC-ATTTTTTATA
** * ** * * * ** * * * * * *
322102 ATTTCAAAATTCATCCCATAATTGCGAC-AAGCATCG-ATTCTCGTAACAGTCTCCATTCTTTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTCAT-GCAATCCCCATTCTTTTC
* * * * * * *
322165 GA-GATT-GGGAGCTAAGAACACATT-CCTT-TCATTAGGATACATGACATTGATGCTTTGGTGT
63 -ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * ** *
322226 CGCAAGAAAATGTTTTCTTTCCACTGTTTTTGATA
124 CGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
322261 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
322324 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * **
322389 AGAAAGGCTTTCTTGT-CGCCAATTTTTGCA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * ** * * * * **
322419 AAGTCTAAGTTCGTGC-CTCAAATGTGGCAAACG-AGGATTCTAAT--AATGGTCTTCATTCTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAATTGTCATGCAA---TCCCCATTCTTT
** * * ** * * * * * ** *
322480 TTGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTG
61 TCATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCG
* * **
322544 CAAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
126 TAA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * *
322578 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCGATTCTTGT-AAG-ACTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGA--ATTGTCATGCAATCCCCATTCTTTT
* * * * ** * * * *
322639 CGA-GATT-GGGAGCTAAGAACACATTCCCTT-T-ATTAGGAAACATGACATTGATGCTTTGATG
62 C-ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * *
322700 TCGTAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* *
322736 GAAGT-AAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * * *
322800 TGATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTAA
* * * *
322865 AAAATGG-TTTCTTGCCACCAATTTTTGTA
129 GAAA-GGCTTTCTTTCCACCATTTTTTATA
* * * * * * ** *
322894 AAGTCTAAGTTTGTGC-CTTAAATGAGACAAACGAGGATTCTAGTAATG--ATCTTCATATATTT
1 AAGTCAAAGTTT-TTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCAT-TCTTT
* * ** * * * * **
322956 T-GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGGATAAACGATATTGATGATTTTCTTTT
61 TCATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATG-CTTTGGTTT
* * * * **
323019 CCGT-TGAAA-TCTTTTCTTTGCACTATTTTCCATA
124 -CGTAAGAAAGGC-TTTCTTTCCACCATTTTTTATA
* ** * * ** * ** * *
323053 ATA-TCAAAATTCATCCCTTAAATATGAC-AAGCATCAATTCTCATAAAAGTCTCCACTT-TTTA
1 A-AGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCAA-TCCCCA-TTCTTTT
* * * * * *
323115 CGA-GATTAGGAAGCAAAAGCACATT-CCTT-TCATTAGGATACATGAAATTGATGCTTTGGTGT
62 C-ATGATTAGGCACCATAA--ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT-T
* * * *
323177 T-GCAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
323212 GAAGT-AAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCCAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATG-CAATCCCCATTCTTTTCA
* *
323276 TGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACATAATATTGATTG-TTTGGTTTCGTA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGA-TGCTTTGGTTTCGTA
* *
323340 AGAAAGGCTTTCTTGT-CACCAATTTTTGTA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* ** * * * * * * **
323370 AAGTCTAAGTTCGTCCCTCAAATGAGACAAACGAGGATTCTAGTAATG--ATCTTCATTC-TTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTTC
* ** * * * * * * ** *
323432 TATGATTAGGCACTATAAACACAT-TCTCCT-ATTTAGGATAAACGATATTCACGATTTTCTTTT
63 -ATGATTAGGCACCATAAAC-TTTGTCTTCTCA-TTAGGATACATGATATTGATGCTTTGGTTTC
* * * * * *
323495 GCATGGAAA-TCTTTTCTTTGCGCTATTTTCCTTACT-
125 GTA-AGAAAGGC-TTTCTTTCCACCATTTT--TTA-TA
* ** * * * * * * * * *
323531 -A-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-ATTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTC-TTT
* * * * * * * * *
323591 TGA-GATT-GTG-AGCTAAGAACACATT-CCAT-TCATTAGGAAACATGACATTGTTGCTTTGGT
61 TCATGATTAG-GCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * *
323651 GTCGCAAGAAAATGTTTTCTTTCCACCATTATTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
323688 GAAGT-AAAGTTTGTT-TCTTAAATAGGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCATTT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * *
323750 CATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* *
323815 AAGAAAGGCTTTCTTGT-CGCCAATTTTTATA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
323846 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--ATCTTCATTC-TTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTT
** ** * ** * * * * * **
323907 CTATGATTAGGCACTGTAAACACAT-TCTCCTGTTTAGGATAAACGATATTCACGATTTTCTTT-
62 C-ATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC
* *
323970 -TACATGGAAA-TCTTTTCTTTTCC-CC-TGTTTCCT-TA
125 GTA-A--GAAAGGC-TTTC-TTTCCACCAT-TTT-TTATA
** * ** * * * * * * * * * *
324005 ATTTCAAAATTCATCCCATAATTACGAC-AAGCATCG-ATTCTCGTAACAGTCTCCATTCTTTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTCAT-GCAATCCCCATTCTTTTC
* * * * * * *
324068 GA-GATT-GGGAGCTAAGAACACATTCG-C-T-TCATAAGGATACATGACATTGATGCTTTGGTG
63 -ATGATTAGGCA-C-CATAA-AC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * ** *
324128 TCGCAAGAAAATGTTTTCTTTCCACTGTTTTTGATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
324164 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
324227 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * **
324292 AGAAAGGCTTTCTTGT-CGCCAATTTTTGCA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * ** * * * * * **
324322 AAGTCTAAGTTCGTGC-CTCAAATGTGGCAAACAAGGATTCTAAT--AATGGTCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCAA---TCCCCATTCTTTT
** * * ** * * * * * ** * *
324384 TGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTGC
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* **
324448 AAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
127 AA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * * *
324481 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-TTTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTCTTTT
* * * * * *
324542 CGA-GATT-GGGAGC-TAAGAACATATT-CCAT-TCATTAGGAAACATGACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-T-TTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * *
324602 GTCGCAAGAAAATGTTTTCTTTCCA-TAGTTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCA-TTTTTTATA
* * * *
324639 GAAGT-AAAGTTTGTT-TCTTAAATAGGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * * *
324701 CATGATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* *
324766 AAGAAAGGCTTTCTTGT-CACCAATTTTTGTA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
324797 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--ATCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTT
** * * ** * * * * * ** * *
324859 TGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTGC
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* * **
324923 AAGGAAA-TCTTTTTTTGCC-TTATTTTCCTTA-A
127 AA-GAAAGGCTTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * * *
324955 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-TTTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTCTTTT
* * * * * *
325016 CGA-GATT-GGGAGC-TAAGAACATATT-CCAT-TCATTAGGAAACATGACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-T-TTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * * *
325076 GTCGCAAGAAAATGTTTTCTTTCCATCGTTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * * *
325113 GAAGT-AAAGTTTGTT-TCTTAAATAGGAC-AAGCATGAATTATCATGCTAGTCCCCATTCGTTT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * * *
325175 CATGATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* * *
325240 AAGAAAGGCTTTCTTGT-CGCCAATTTTTGTA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
325271 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAAAGAGGATTCTAGTAAT--AATCTTCATTC-TTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGAC-AAAGAAGAAT-T-GTCATGCAATCCCCATTCTTTT
* ** * * * * * * **
325332 CTATGATTAGGCACTATAAACACAT-TCTCCT-ATTTAGGATAAACGATATTCACGATTTTCTTT
62 C-ATGATTAGGCACCATAAAC-TTTGTCTTCTCA-TTAGGATACATGATATTGATGCTTTGGTTT
* * * * * * *
325395 TGCATGGAAA-TCTTTTCTTTGCGCTATTTTCCTTACT-
124 CGTA-AGAAAGGC-TTTCTTTCCACCATTTT--TTA-TA
* ** * * * * * * * * *
325432 -A-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-ATTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTC-TTT
* * * * * * * * *
325492 TGA-GATT-GTG-AGCTAAGAACACATT-CCAT-TCATTAGGAAACATGACATTGTTGCTTTGGT
61 TCATGATTAG-GCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * *
325552 GTCGCAAGAAAATGTTTTCTTTCCACCATTATTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
325589 GAAGT-AAAGTTTGTT-TCTTAAATAGGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCATTT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * *
325651 CATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* * *
325716 AAGAAAGGCTTTCTTGT-CGCCAATTTTTGTA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
325747 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--ATCTTCATTC-TTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTT
** ** * ** * * * * * **
325808 CTATGATTAGGCACTGTAAACACAT-TCTCCTGTTTAGGATAAACGATATTCACGATTTTCTTT-
62 C-ATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC
* *
325871 -TACATGGAAA-TCTTTTCTTTTCC-CC-TGTTTCCT-TA
125 GTA-A--GAAAGGC-TTTC-TTTCCACCAT-TTT-TTATA
** * ** * * * * * * * * * *
325906 ATTTCAAAATTCATCCCATAATTACGAC-AAGCATCG-ATTCTCGTAACAGTCTCCATTCTTTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTCAT-GCAATCCCCATTCTTTTC
* * * * * * *
325969 GA-GATT-GGGAGCTAAGAACACATTCG-C-T-TCATAAGGATACATGACATTGATGCTTTGGTG
63 -ATGATTAGGCA-C-CATAA-AC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * ** *
326029 TCGCAAGAAAATGTTTTCTTTCCACTGTTTTTGATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
326065 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
326128 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * **
326193 AGAAAGGCTTTCTTGT-CGCCAATTTTTGCA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * ** * * * * * **
326223 AAGTCTAAGTTCGTGC-CTCAAATGTGGCAAACAAGGATTCTAAT--AATGGTCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCAA---TCCCCATTCTTTT
** * * ** * * * * * ** * *
326285 TGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTGC
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* **
326349 AAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
127 AA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * * *
326382 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-TTTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTCTTTT
* * * * * * *
326443 CGA-GATT-GGGAGC-TAAGAACATATT-CCAT-TCATTAGGAAACATAACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-T-TTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * *
326503 GTCGCAAGAAAATGATTTCTTTCCATCATTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
326540 GAAGT-AAAGTTTGTT-TCTTAAATAGGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * * *
326602 CATGATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* *
326667 AAGAAAGGCTTTCTTGT-CACCAATTTTTGTA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
326698 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--ATCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTT
** * ** * * * * * * ** *
326760 TGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGGATAAACGATATTCACGATTTTCTTTTG
62 CATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCG
* * **
326824 CAAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
126 TAA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * *
326858 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCGATTCTTGT-AAG-ACTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGA--ATTGTCATGCAATCCCCATTCTTTT
* * * * * * * *
326919 CGA-GATT-GGGAGCTAAGAACACTTT-CCCT-TCATTAGGAAACATGACATTGATGCTTTGGTG
62 C-ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * *
326980 TCGCAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * *
327016 GAAGT-AAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * * *
327080 TGATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTTCGTAA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTAA
* * * *
327145 AAAATGG-TTTCTTGCCACCAATTTTTGTA
129 GAAA-GGCTTTCTTTCCACCATTTTTTATA
* * * * * * * ** *
327174 AAGTCTAAGTTCGTGC-CTTAAATGAGACAAACGAGGATTCTAGTAATG--ATCTTCATATATTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCAT-TCTTT
* * ** * * * * * **
327236 T-GTGATTAGGCACTATAAAC-ACGTTCTCCTCATTAGTATAAACGATATTGATGATTTTCTTTT
61 TCATGATTAGGCACCATAAACTTTG-TCTTCTCATTAGGATACATGATATTGATG-CTTTGGTTT
* * * * **
327299 CCGT-TGAAA-TCTTTTCTTTGCACTATTTTCCATA
124 -CGTAAGAAAGGC-TTTCTTTCCACCATTTTTTATA
* ** * * ** * * *
327333 ATA-TCAAAATTCATCCCTTAAATATGAC-AAGCATCAATTCTCAT-AATAGTCTCCACTT-TTT
1 A-AGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCA-A-TCCCCA-TTCTTT
* * * * * * *
327394 ACGA-GATTAGGAAGCAAAAGCACATT-CCTT-TCATTAGGATACATGACATTGATGCTTTGGTG
61 TC-ATGATTAGGCACCATAA--ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT-
* * * *
327456 TT-GCAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* *
327492 GAAGT-AAAGTTTGTCTCTTAAATAAGACAAAGAAGAATTGCCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * *
327556 TGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTAA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTAA
* *
327621 GAAAGGCTTTCTTGT-CACCAATTTTTGTA
129 GAAAGGCTTTCTT-TCCACCATTTTTTATA
* ** * * * * * * ** *
327650 AAGTCTAAGTTCGTCTCTCAAATGAGGCAAACGAGGATTCTAGTAATG--ATCTTCATTC-GTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTTC
* ** * ** * * * * * ** *
327712 TATGATTAGGCACTATAAACACAT-TCTCCTGTTTAGGATAAACGATATTCACGATTTTCTTTTG
63 -ATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCG
* * *** * * * *
327776 CATGGAAATATTTTCTTTGCGCTATTTTCCTCACT-
126 TA-AGAAAGGCTTTCTTTCCACCATTTT--TTA-TA
* ** * * * * * * * *
327811 -A-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-ATTCTCATAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTCAT--GCAATCCCCATTCTTTT
* * * * * * * * *
327871 CGA-GATTGGGAGCTAACA-ACACATT-CCAT-TCATTAGGAAACATGACATTGATGCTTTGGTG
62 C-ATGATT-AG-GC-ACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * * *
327932 TCGCAAGAAAATGTTTTCTTTCCACCGTTTTTGATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * * *
327968 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
328031 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* *
328096 AGAAAGGCTTTCTTGT-CACCAATTTTTGTA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * ***
328126 AAGTCTAAGTTCTTGC-CTCAAATGAGACAAATGAGGATTCTTGT-AGTG--ATCTTAATTCTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGA--ATTGTCA-TGCAATCCCCATTCTTT
** * ** * * * * * * **
328187 TTGTGATTAGGCACTATAAACACAT-TCTCCT-ATTTAGGATAAACGATATTCACGATTTTCTTT
61 TCATGATTAGGCACCATAAAC-TTTGTCTTCTCA-TTAGGATACATGATATTGATGCTTTGGTTT
* * * * * * * *
328250 TGCATGGAA-TCTTTTCTTTGCGCTATTTTCCTTACT-
124 CGTAAGAAAGGC-TTTCTTTCCACCATTTT--TTA-TA
* ** * * * * * * ** *
328286 -A-TCAAAATTCATCGCATAATTATGAC-AAGCATCG-ATTCCCGT-AAG-AGGCTCCATTCTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATT---GTCATGCAATCCCCATTCTTT
* * * * *
328345 TCGAT-ATT-GGGAGC-TAAGAACATATT-CCTT-TCATTAGGAAACATGACATTGATGCTTTGG
61 TC-ATGATTAGGCACCAT-A-AAC-T-TTGTCTTCTCATTAGGATACATGATATTGATGCTTTGG
* * * * * *
328405 TGTCGCAAGAAGATGTTTTCTTTCCACTATTTTTGATA
121 TTTCGTAAGAA-AGGCTTTCTTTCCACCATTTTTTATA
* * * * * *
328443 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTTAAGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
328506 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * *
328571 AGAAAGGCTTTCTTGT-CGCCAATTTTTGTA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * ** * * * * **
328601 AAGTCTAAGTTCGTGC-CTCAAATGTGGCAAACG-AGGATTCTAAT--AATGGTCTTCATTCTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAATTGTCATGCAA---TCCCCATTCTTT
** * * ** * * * * * ** *
328662 TTGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTG
61 TCATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCG
* * * **
328726 CAAGGAAA-TCTTTTCATTGCC-TTATTTTCCTTA-A
126 TAA-GAAAGGC-TTTC-TTTCCACCATTTT--TTATA
* ** * * * * * * * * *
328760 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCGATTCTTGT-AAG-ACTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGA--ATTGTCATGCAATCCCCATTCTTTT
* * * * * * * * *
328821 CGA-GATT-GGGAGCTAAGAACACATT-CCCT-TCATTAGGAAACATGACATTGATGCTTTGGTG
62 C-ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * *
328882 TCGTAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* *
328918 GAAGT-AAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * * *
328982 TGATTAGGCACCATTAACTTTGTCTTCTCATAAGGATACTTGATATTGATGCTTTGTTTTCGTAA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT-A
* * * *
329047 AAAAAGG-TTTCTTGCCACCAATTTTTGTA
128 AGAAAGGCTTTCTTTCCACCATTTTTTATA
* * * * * * * ** *
329076 AAGTCTAAGTTTGTGC-CTTAAATGAGACAATCGAGGATTCTAGTAATG--ATCTTCATATATTT
1 AAGTCAAAGTTT-TTCTCTTAAATAAGACAA-AGAAGAAT-T-GTCATGCAATCCCCAT-TCTTT
* * ** * * * * **
329138 T-GTGATTAGGCACTATAAAC-ACGTTCTCCTCATTAGGATAAACGATATTGATGATTTTCTTTT
61 TCATGATTAGGCACCATAAACTTTG-TCTTCTCATTAGGATACATGATATTGATG-CTTTGGTTT
* * * * **
329201 CCGT-TGAAA-TCTTTTCTTTGCACTATTTTCCATA
124 -CGTAAGAAAGGC-TTTCTTTCCACCATTTTTTATA
* *** * * ** * ** * *
329235 ATA-TCAAAATTCAACCCTTAAATATGAC-AAGCATCAATTCTCATAAAAGTCTCCACTT-TTTA
1 A-AGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCAA-TCCCCA-TTCTTTT
* * * * * *
329297 CGA-GATTAGGAAGCAAAAGCACATT-CCTT-TCATTAGGATACATGACATTGATGCTTTGGTGT
62 C-ATGATTAGGCACCATAA--ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT-T
* * * *
329359 T-GCAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
329394 GAAGT-AAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCCAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATG-CAATCCCCATTCTTTTCA
*
329458 TGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACATGATATTGATTG-TTTGGTTTCGTA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGA-TGCTTTGGTTTCGTA
* *
329522 AGAAAGGCTTTCTTGT-CACCAATTTTTGTA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* ** * * * * * * * **
329552 AAGTCTAAGTTCGTCCCTCAAATGAGGCAAACGAGGATTCTAGTAATG--ATCTTCATTC-TTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTTC
* ** * ** * * * * * ** *
329614 TATGATTAGGCACTATAAACACAT-TCTCCTGTTTAGGATAAACGATATTCACGATTTTCTTTTG
63 -ATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCG
* * * * * *
329678 CATGGAAA-TCTTTTCTTTGCGCTATTTTCCTTAGT-
126 TA-AGAAAGGC-TTTCTTTCCACCATTTT--TTA-TA
* ** * * * * * * * * *
329713 -A-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-ATTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTCTTTT
* * * * * * * * * *
329773 CGA-GATT-GGGAGCTAAGAACACATT-CCAT-TCATTAGGAAACATGACATTGTTGCTTTGGTG
62 C-ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * * *
329834 TCGCAAGAAAATGTTTTCTTTCCACCGTTTTTGATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
329870 GAAGT-AAAGTTTGTT-TCTTAAATAGGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * *
329932 CATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* *
329997 AAGAAAGGCTTTCTTGT-CACCAATTTTTGTA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * **
330028 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTTGT-AGTG--ATCTTCATTCTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGA--ATTGTCA-TGCAATCCCCATTCTTT
** * * ** * * * * * * ** *
330089 TTGTGATTAGGTACTATAAACACAT-TCTCCTCATTAGGATAAACGATATTCACGATTTTCTTTT
61 TCATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC
* * * **
330153 GCATGGAAA-TCTTTTCTTTTCC-CCTATTTCCT-TA
125 GTA-AGAAAGGC-TTTC-TTTCCACC-ATTTTTTATA
** * ** * * * ** * * * * * *
330187 ATTTCAAAATTCATCCCATAATTGCGAC-AAGCATCG-ATTCTCGTAACAGTCTCCATTCTTTTC
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTCAT-GCAATCCCCATTCTTTTC
* * * * * * *
330250 GA-GATT-GGGAGCTAAGAACACATT-CCTT-TCATTAGGATACATGACATTGATGCTTTGGTGT
63 -ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * ** *
330311 CGCAAGAAAATGTTTTCTTTCCACTGTTTTTGATA
124 CGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * *
330346 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
330409 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * **
330474 AGAAAGGCTTTCTTGT-CGCCAATTTTTGCA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * ** * * * * * **
330504 AAGTCTAAGTTCGTGC-CTCAAATGTGGCAAACAAGGATTCTAAT--AATGGTCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCAA---TCCCCATTCTTTT
** * * *** * * * * * ** * *
330566 TGTGATTAGGTACTATAAAAAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTGC
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* **
330630 AAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
127 AA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * *
330663 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCGATTCCTGT-AAG-ACTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAAT--TGTCATGCAATCCCCATTCTTTT
* * * * * * * *
330724 CGA-GATT-GGGAGCTAAGAACACTTT-CCCT-TCATTAGGAAACATGACATTGATGCTTTGGTG
62 C-ATGATTAGGCA-C-CATAA-ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * *
330785 TCGCAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * *
330821 GAAGT-AAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * * * ** *
330885 TGATTAGGCACCATTAACTTTTTCTTCTCATAAGGATACAAGATATTGATGCTTTATTTTCCTTA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTT-CGTA
* * * *
330950 AAAAATGG-TTTCTTGCCACCAATTTTTGTA
128 AGAAA-GGCTTTCTTTCCACCATTTTTTATA
* * * * * * * ** *
330980 AAGTCTAAGTTCGTGC-CTTAAATGAGACAAACAAGGATTCTAGTAATG--ATCTTCATATATTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAAGAA-GAAT-T-GTCATGCAATCCCCAT-TCTTT
* * ** * * * * * **
331042 T-GTGATTAGGCACTATAAAC-ACGTTCTCCTCATTAGTATAAACGATATTGATGATTTTCTTTT
61 TCATGATTAGGCACCATAAACTTTG-TCTTCTCATTAGGATACATGATATTGATG-CTTTGGTTT
* * * * **
331105 CCGT-TGAAA-TCTTTTCTTTGCACTATTTTCCATA
124 -CGTAAGAAAGGC-TTTCTTTCCACCATTTTTTATA
* ** * * * ** * * *
331139 ATA-TCAAAATTCATCCCTTAAATATGAC-AGGCATCAATTCTCAT-AATAGTCTCCACTT-TTT
1 A-AGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCA-A-TCCCCA-TTCTTT
* * * * * * * *
331200 ACGA-GATTAGGAAGCAAAAGCACATT-CCTT-TCATTAGGATACATGACATTGATGCTTTGGTG
61 TC-ATGATTAGGCACCATAA--ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * ** *
331262 TCGCAAGAAAATGTTTTCTTTCCACTGTTTTTGATA
123 TCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * * *
331298 GAAGT-AAAGTTTGTCTCTTAAATAAGAC-AAGCATGAATTGTTATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * *
331361 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * **
331426 AGAAAGGCTTTCTTGT-CGCCAATTTTTGCA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * ** * * * * * **
331456 AAGTCTAAGTTCGTGC-CTCAAATGTGGCAAACAAGGATTCTAAT--AATGGTCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCAA---TCCCCATTCTTTT
** * * ** * * * * * ** * *
331518 TGTGATTAGGTACTATAAACAAT-TCTCCTCATTAGGATAAACGATATTCATGATTTTCTTTTGC
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* **
331582 AAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
127 AA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * *
331615 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATAG-ATTCTCGTAAG-AGTCTCCATTCTGTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTCTTTT
* * * * * *
331676 CGA-GATT-GGGAGC-TAAGAACATATT-CCAT-TCATTAGGAAACATGACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-T-TTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * * *
331736 GTCGCAAGAAAATGTTTTCTTTCCATCGTTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * * * *
331773 GAAGT-AAAGTTTGTT-TCCTAAATAGGAC-AAGCATGAATTGTCATGCTAGTCCCCATTCGTAT
1 -AAGTCAAAGTTT-TTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTT
* * * *
331835 CATGATTAGGAACCATAAACTTTGTCTTCTCATAAGGATACACGATATTGATTCTTTGGTTTCGT
62 CATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGT
* *
331900 AAGAAAGGCTTTCTTGT-CACCAATTTTTGTA
127 AAGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
331931 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--ATCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTT
** * ** * * * * * * ** *
331993 TGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGGATAAACGATATTCACGATTTTCTTTTG
62 CATGATTAGGCACCATAAAC-TTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCG
* * **
332057 CAAGGAAA-TCTTTTCTTTGCC-TTATTTTCCTTA-A
126 TAA-GAAAGGC-TTTCTTT-CCACCATTTT--TTATA
* ** * * * * * * * * *
332091 AA-TCAAAATTCATCCCATAATTATGAC-AAGCATCGATTCTTGT-AAG-ACTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGA--ATTGTCATGCAATCCCCATTCTTTT
* * * * *
332152 CGA-GATT-GGGAGC-TAAGAACATTT-TC-CCTTCATTAGGAAACATGACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-TTTGTCTTC-TCATTAGGATACATGATATTGATGCTTTGGT
* * * * *
332212 GTCGCAAGAAAATGTTTTCTTTCCACCGTTTTTTATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * *
332249 GAAGT-AAAGTTTGTCTCTTAAATGAGACAAATAAGAATTGTCATGCTAATCCCCATTCTTTTCA
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGC-AATCCCCATTCTTTTCA
* * * * *
332313 TGATTAGGCACCATTAACTTTGTCTTCTCATAAAGATACACGATATTGATGCTTTGTTTTCGTAA
64 TGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTAA
* * * *
332378 AAAATGG-TTTCTTGCCACCAATTTTTGTA
129 GAAA-GGCTTTCTTTCCACCATTTTTTATA
* * * * * * * ** *
332407 AAGTCTAAGTTCGTGC-CTTAAATGAGACAAACGAGGATTCTAGTAATG--ATCTTCATATATTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCAT-TCTTT
* * * ** * * * * * **
332469 T-GTTATTAGGCACTATAAAC-ACGTTCTCCTCATTAGTATAAACGATATTGATGATTTTCTTTT
61 TCATGATTAGGCACCATAAACTTTG-TCTTCTCATTAGGATACATGATATTGATG-CTTTGGTTT
* * * * **
332532 CCGT-TGAAA-TCTTTTCTTTGCACTATTTTCCATA
124 -CGTAAGAAAGGC-TTTCTTTCCACCATTTTTTATA
* ** * ** * * *
332566 ATA-TCAAAATTCATCCCTTAAATAAGAC-AAGCATCAATTCTCAT-AATAGTCTCCACTT-TTT
1 A-AGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGCA-A-TCCCCA-TTCTTT
* * * * * * *
332627 ACGA-GATTAGGAAGCAAAAGCACATT-CCTT-TCATTAGGATACATGACATTGATGCTTTGGTG
61 TC-ATGATTAGGCACCATAA--ACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT-
* * * * *
332689 TT-GCAAGAAAATGTTTTCTTTCCACCGTTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * * * * *
332725 GAAGT-AAAGTTTGTCTCTTAACTAAGAC-AAGCATGAAGTGTCATGCTAGTCCCCATTCGTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-AAGAATTGTCATGC-AATCCCCATTCTTTTC
* * * *
332788 ATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACGATATTTATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* *
332853 AGAAAGGCTTTCTTGT-CACCAATTTTTGTA
128 AGAAAGGCTTTCTT-TCCACCATTTTTTATA
* * * * * * * * **
332883 AAGTCTAAGTTCGTGC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--ATCTTCATTCTTTT
1 AAGTCAAAGTT-TTTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCAATCCCCATTCTTTT
** * ** * * * * * * ** *
332945 TGTGATTAGGCACTATAAACACAT-TCTCCTC-TTCAGGATAAACGATATTCACGATTTTCTTTT
62 CATGATTAGGCACCATAAAC-TTTGTCTTCTCATT-AGGATACATGATATTGATGCTTTGGTTTC
* * * * * *
333008 GCATGGAAA-TCTTTTCTTTGCGCTATTTTCCTTA-A
125 GTA-AGAAAGGC-TTTCTTTCCACCATTTT--TTATA
* * ** * * * * * * * * *
333043 TA-TCAAAATTCATCCCATAATTATGAC-AAGCATCG-ATTCTCGTAAG-AGTCTCCATTCTTTT
1 AAGTCAAAGTTTTTCTCTTAAATAAGACAAAG-A-AGAATTGTC--ATGCAATCCCCATTCTTTT
* * ** * * *
333104 CGA-GATT-GGGAGC-TAAGAACGCAT-TC-CCTTCATTAGGAAACATGACATTGATGCTTTGGT
62 C-ATGATTAGGCACCAT-A-AAC-TTTGTCTTC-TCATTAGGATACATGATATTGATGCTTTGGT
* * * * *
333164 GTCGCAAGAAAATGTTTTCTTTCCACCATTTTTGATA
122 TTCGTAAG-AAAGGCTTTCTTTCCACCATTTTTTATA
* * *
333201 GAAGT-AAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCATGCTAATCCCCATTCTTTTC
1 -AAGTCAAAGTTTTTCTCTTAAATAAGAC-AAAGAAGAATTGTCATGC-AATCCCCATTCTTTTC
* * * * * *
333265 ATGATTAGGCCCCATCAGCTTTGTCTTCTCATCAGGATACACGATATTGATTCTTTGGTTTCGTA
63 ATGATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTA
* * * *
333330 AGAAAGGGTTTCCTGT-CACCAATTTTTGTA
128 AGAAAGGCTTT-CTTTCCACCATTTTTTATA
*
333360 AAGTCTAAGTT
1 AAGTCAAAGTT
333371 CGTGCCTCAA
Statistics
Matches: 9835, Mismatches: 3273, Indels: 2344
0.64 0.21 0.15
Matches are distributed among these distances:
154 1 0.00
155 18 0.00
156 124 0.01
157 827 0.08
158 3411 0.35
159 4719 0.48
160 508 0.05
161 215 0.02
162 12 0.00
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.37
Consensus pattern (157 bp):
AAGTCAAAGTTTTTCTCTTAAATAAGACAAAGAAGAATTGTCATGCAATCCCCATTCTTTTCATG
ATTAGGCACCATAAACTTTGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGTAAGA
AAGGCTTTCTTTCCACCATTTTTTATA
Found at i:336270 original size:158 final size:159
Alignment explanation
Indices: 335618--344855 Score: 1898
Period size: 159 Copynumber: 58.2 Consensus size: 159
335608 ATGCTAGTCC
* * * * * *
335618 CCATTCGTTTCATGATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * * **
335683 TTGGTTTCGTAAGAAAG-GCTTTCTTGCAACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
* *
335747 GAGACAAACGAGGATTCTAGTACTGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * *
335776 TCATACATTTT-GTGATTAGGCACTATAAACACGTTGTCCTTATTAGGATAAACAATATTGATGA
1 CCATTC-TTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATG-
* ** ** * * *** *** * *
335840 TTTTTTTTTC-CGTTGAAA-TCTTTTCTTTGCACTGGTTTCCATAATA-TCAAAATTCAT-CCAT
64 CTTTGGTTTCGC-AAGAAAGTGTTTTCTTTCCACCAATTTTTGTAA-AGTCAAAGTTCGTGCC-T
*
335901 TAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCT
126 TAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCT
* * * ** * * ** *
335935 CCACTT-TTTTCGAGATTAGGAAGCA-AAAGCACATTCCATT-T-ATTAGGATAGATAACATTGA
1 CCA-TTCTTTTCGTGATTAGGCACCATAAA-C-TTTTTC-TTCTCATTAGGATACACGATATTGA
* ** * *
335996 TGCTTTGGTGTT-GCAAGAAAATGTTTTCTTTCCACCGTTTTTTATAGAAGT-AAAGTTTGT-CT
62 TGCTTTGGT-TTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTA-AAGTCAAAGTTCGTGC-
* * * * *
336058 CTTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCC
124 CTTAAATGAGACAAATGAGGATTCTAGTAATG---ATCT
* * * * *
336094 CCACTCTTTTCATGATTAGGCACCATAAACTTTTTCTTCTCATAAGGATACACAATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * *
336159 TTGGTTTCGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
336223 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
336252 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * * *
336317 TTTCTTTTGCATGGAAA-TCTTTTTTTTGC-GCTATTTTCCT-TAATA-TCAAAATTCATCCCAT
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTT
* * *
336378 -AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
127 AAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * ** * * * *
336411 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTCCTT-TCATTAGGAAACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AAC-TTTTTCTTCTCATTAGGATACACGATATTGAT
* *
336473 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCACC-ATTTTTGATAGAAGT-AAAGTT--T-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
** ** * * ** * *
336533 TTAAAAAAGACAAAAAAAGTATTGTCA-TGCTAATCC
125 TTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * *
336569 CCATTCTTTTCATGATTAGGCACCATCAACTTTGTCTTCTCATTAGGATACACGATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * * *
336634 TTGGTTTTGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
336698 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
336727 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * *
336792 TTTCTTTTGCATGGAAA-TCTTTTCTTTGCA-CTATTTTCCT-TAATA-TGAAAATTCATCCCAT
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTT
* * *
336853 -AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
127 AAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * ** * * * *
336886 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTCCTT-TCATTAGGAAACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AAC-TTTTTCTTCTCATTAGGATACACGATATTGAT
* * *
336948 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
** ** * * ** * *
337010 TTAAAAAAGACAAAAAAAGTATTGTCA-TGCTAATCC
125 TTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * *
337046 CCATTCTTTTCATGATTAGGCACCATCAACTTTGTCTTCTCATTAGGATACACGATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * * *
337111 TTTGTTTCGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
337175 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
337204 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * *
337269 TTTCTTTTGCATGGAAA-TCTTTTCTTTGC-GCTATTTTCCT-TAATA-TCAAAATTCATCCCAT
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTT
* * * *
337330 -AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTGT
127 AAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * *** * * * *
337363 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACAAGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * * * *
337425 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCTCC-GTTTTTGATAGAA-TTAAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* * * * *
337487 TTAAATAAGAC-AA-GCACGAAT-T-GTCATGCTAGTCC
125 TTAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCT
* * *
337522 CCATT-TGTTTCGTGATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATT
1 CCATTCT-TTTCGTGATTAGGCA-CCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATG
* * * * * **
337585 CTTTGGTTTCGTAAGAAAG-GCTTTCTTGT-CACCAATTTTTGTAAACTCTAAGTTTGTGCCTCC
64 CTTTGGTTTCGCAAGAAAGTGTTTTCTT-TCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTA
* *
337648 AATGAGACAAACGAGGATTCTAGTACTGATCT
128 AATGAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
337680 TCATACATTTT-GTGATTAGGCACTATAAACACGTTGTCCTTATTAGGATAAACAATATTGATGA
1 CCATTC-TTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGC
** ** * * *** *** * *
337744 TTTTTTTTC-CGTTGAAA-TCTTTTCTTTGCACTGGTTTCCATAATA-TCAAAATTCAT-CCATT
65 TTTGGTTTCGC-AAGAAAGTGTTTTCTTTCCACCAATTTTTGTAA-AGTCAAAGTTCGTGCC-TT
*
337805 AAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCT
127 AAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCT
* * * ** * * ** *
337838 CCACTT-TTTTCGAGATTAGGAAGCA-AAAGCACATTCCATT-T-ATTAGGATAGATAACATTGA
1 CCA-TTCTTTTCGTGATTAGGCACCATAAA-C-TTTTTC-TTCTCATTAGGATACACGATATTGA
* ** * *
337899 TGCTTTGGTGTT-GCAAGAAAATGTTTTCTTTCCACCGTTTTTTATAGAAGT-AAAGTTTGT-CT
62 TGCTTTGGT-TTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTA-AAGTCAAAGTTCGTGC-
** ** * * ** * *
337961 CTTAAAAAAGACAAAAAAAGTATTGTCA-TGCTAATCC
124 CTTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * *
337998 CCATTCTTTTCATGATTAGGCACCATAAACTTTTTCTTCTCATAAGGATACACAATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * *
338063 TTGGTTTCGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
338127 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
338156 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * *
338221 TTTCTTTTGCATGGAAA-TCTTTTCTTTGC-GCTATTTTCCT-TAATA-TCAAAATTCATCCCAT
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTT
* * * *
338282 -AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTGT
127 AAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * *** * * * *
338315 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACAAGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * * * * *
338377 GGTTTGGTGTCGCAAGAAAATGTTTTCTTTCCTCC-GTTTTTGATAGAA-TTAAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* * * * *
338439 TTAAATAAGAC-AA-GCACGAAT-T-GTCATGCTAGTCC
125 TTAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCT
* * *
338474 CCATT-TGTTTCGTGATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATT
1 CCATTCT-TTTCGTGATTAGGCA-CCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATG
* * * * * **
338537 CTTTGGTTTCGTAAGAAAG-GCTTTCTTGT-CACCAATTTTTGTAAACTCTAAGTTTGTGCCTCC
64 CTTTGGTTTCGCAAGAAAGTGTTTTCTT-TCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTA
* * *
338600 AATGAGACAAACGAGGATTCTACTACTGATCT
128 AATGAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * *
338632 TCATACATTTT-GTGATTAGGCACTATAAACACGTTGTCCTTATTAGGATAAACAATATTGATGA
1 CCATTC-TTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATG-
* ** ** * * *** *** * *
338696 TTTTTTTTTC-CGTTGAAA-TCTTTTCTTTGCACTGGTTTCCATAATA-TCAAAATTCAT-CCAT
64 CTTTGGTTTCGC-AAGAAAGTGTTTTCTTTCCACCAATTTTTGTAA-AGTCAAAGTTCGTGCC-T
*
338757 TAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCT
126 TAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCT
* * * ** * * ** *
338791 CCACTT-TTTTCGAGATTAGGAAGCA-AAAGCACATTCCATT-T-ATTAGGATAGATAACATTGA
1 CCA-TTCTTTTCGTGATTAGGCACCATAAA-C-TTTTTC-TTCTCATTAGGATACACGATATTGA
* ** * *
338852 TGCTTTGGTGTT-GCAAGAAAATGTTTTCTTTCCACCGTTTTTTATAGAAGT-AAAGTTTGT-CT
62 TGCTTTGGT-TTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTA-AAGTCAAAGTTCGTGC-
** ** * * ** ** * *
338914 CTTAAAAAAGACAAAAAAAGTATTGTCTTGCTAATCC
124 CTTAAATGAGAC-AAATGAGGATTCTAGTAATGATCT
* * * *
338951 CCATTCTTTTCATGATTAGGCACCATCAACTTTGTCTTCTCATTAGGATACACGATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * * *
339016 TTGGTTTTGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
339080 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * *
339109 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCATGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * *
339174 TTTCTTTTGCATGGAAA-TCTTTTCTTTGCA-CTATTTTCCT-TAATA-TGAAAATT-GATCCCA
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCG-TGCCT
* * *
339234 T-AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
126 TAAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * ** * * * **
339268 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTCCTT-TCATTAGGAAACATGGCATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AAC-TTTTTCTTCTCATTAGGATACACGATATTGAT
* * *
339330 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
** ** * * ** * *
339392 TTAAAAAAGACAAAAAAAGTATTGTCA-TGCTAATCC
125 TTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * * * *
339428 CCATTCTTTTCATGATTAGGCACCATCAGCTTTGTCTTCTCATCAGGATACACGATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * *
339493 TTGGTTTCGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
339557 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * * *** * * * * * *
339586 TCATTTTTTTTGTGATTAGGCACTATAAACACATTCTCCTC-TCCAGGATAAACGATATTCACGA
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCAT-TAGGATACACGATATTGATGC
** * ** * * * * * * * *
339650 TTTTCTTTTGCGTGGAAA-TCTTTTCTTTGC-GCTATTTTACT-TAATA-TCAAAATTCATCCCA
65 TTTGGTTTCGC-AAGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCT
* * *
339711 T-AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
126 TAAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * **** * * * *
339745 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACAATC-CCTTCATTAGGAAACAAGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * *
339807 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* * * *
339869 TTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCC
125 TTAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCT
* * * * * * *
339904 CCATTCGTTTCATGATTAGGCTCCATCAACTTTGTT-TTTTCATAAGGATACACGATATTGATTC
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTT-TTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
339968 TTTGGTTTCGTAAGAAAG-GCTTTCTTGCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA
65 TTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAA
340032 TGAGACAAATGAGGATTCTAGTAATGATCT
130 TGAGACAAATGAGGATTCTAGTAATGATCT
* * * * *** * * * * * * *
340062 TCATTCTTTTTGTCATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * *
340127 TTTCTTTTGCATGGAAA-TCTTTTCTTTGC-GCTATTTTACT-TAATA-TCAAAATTCATCCCAT
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTT
* * *
340188 -AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
127 AAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * *** * * * *
340221 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * *
340283 GCTTTGGTGTCGCAAGAAAATGTTTTATTTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* * * *
340345 TTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCC
125 TTAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCT
* * * * * * *
340380 CCATTCGTTTCATGATTAGGCTCCATCAACTTTGTT-TTCTCATAAGGATACATGATATTGATTC
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTT-TTCTTCTCATTAGGATACACGATATTGATGC
* * * *
340444 TTTGGTTTCGTAAGAAAG-GGTTTCTTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAA
65 TTTGGTTTCGCAAGAAAGTGTTTTCTT-TCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAA
340507 ATGAGACAAATGAGGATTCTAGTAATGATCT
129 ATGAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
340538 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * * *
340603 TTTCTTTTGCATGAAAATCTTTTCTTTGC-GCTATTTTACT-TAATA-TCAAAATTCATCCCAT-
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTTA
* * *
340664 AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
128 AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * *** * * * *
340697 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * *
340759 GCTTTGGTGTCGCAAGAAAATGTTTTCATTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* ** * * ** * *
340821 TTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCC
125 TTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * * ** * *
340857 CCATTCTTTTCATGATTAGGCACCATCAACTTTGTCTTCTCATCAAAATACACGATCTTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * *
340922 TTGGTTTCGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
340986 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
341015 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * *
341080 TTTCTTTTGCATGGAAA-TCTTTTCTTT--ACGCTATTTTCCT-TAATA-TCAAAATTCATCCCA
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCAC-CAATTTT--TGTAA-AGTCAAAGTTCGTGCCT
* * *
341140 T-AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
126 TAAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * *** * * * *
341174 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACAAGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * * * *
341236 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCTCC-GTTTTTGATAGAA-TTAAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* * *
341298 TTAAATAAGACAAGCATGA--A-T-TA-TCATGCTAGTCC
125 TTAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCT
* * * *
341333 CCATT-TGTTTCATGATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATT
1 CCATTCT-TTTCGTGATTAGGCA-CCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATG
* * * *
341396 CTTTGGTTTCGTAAGAAAG-GCTTTCTTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCA
64 CTTTGGTTTCGCAAGAAAGTGTTTTCTT-TCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTA
341459 AATGAGACAAATGAGGATTCTAGTAATGATCT
128 AATGAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * ***
341491 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACAAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * *
341556 TTTCTTTTGCATGGAAA-TATTTTCTTTGC-GCTATTTTCCT-TAATA-TCAAAATTCATCCCAT
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTT
* * *
341617 -AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
127 AAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
** * * *** * * * *
341650 CCATTCTTTTCAAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * *
341712 GCTTTGGTGTCGCAAGAAAATGTTTTCATTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* ** * * ** * *
341774 TTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCC
125 TTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * * ** *
341810 CCATTCTTTTCATGATTAGGCACCATCAACTTTGTCTTCTCATCAAAATACACGATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * *
341875 TTGGTTTCGTAAGAAAGGGTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
341939 GAGACAAATGAGGATTCTAGTAATGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
341968 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * * *
342033 TTTCTTTTGCATGGAAA-TCTTTTCTTTGC-GCTATTTTCCT-TAATA-TCAAAATTCATCCCAT
66 TTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTT
* * *
342094 -AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
127 AAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
** * * *** * * * *
342127 CCATTCTTTTCAAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACAAGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * * * *
342189 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCTCC-GTTTTTGATAGAA-TTAAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* * *
342251 TTAAATAAGACAAGCATGA--A-T-TA-TCATGCTAGTCC
125 TTAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCT
* * * *
342286 CCATT-TGTTTCATGATTAGGCACCCAT-AACTTTGTCTTCTCATAAGGATACACGATATTGATT
1 CCATTCT-TTTCGTGATTAGGCA-CCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATG
* * * * **
342349 CTTTGGTTTCGTAAGAAAG-GCTTTCTTGT-CACCAATTTTTGTAAACTCTAAGTTCGTGCCTCC
64 CTTTGGTTTCGCAAGAAAGTGTTTTCTT-TCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTA
* * * **
342412 AATGAGTCAAACGAGCATTCTAGTGCTGATCT
128 AATGAGACAAATGAGGATTCTAGTAATGATCT
* * * * *** * * * * * * * *
342444 TCATACATTTT-TTGATTAGGCACTATAAACACGTTGTCCTTATTAGGATAAATGATATTCACGA
1 CCATTC-TTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGC
** * * * * * * * * * * *
342508 TTTTCTTTTGCATGGAAA-TCTTTTATTTTC-CC-TTTTTTCCTTAATA-TCAAAATTCATCCCA
65 TTTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTTT--GTAA-AGTCAAAGTTCGTGCCT
* ** * *
342569 TAATTATGAAACCCAT--CGATTCTCGTAA-GAGTCT
126 TAA--ATGAGACAAATGAGGATTCTAGTAATGA-TCT
* * *** * * *
342603 CCATTCTTTTCGAGATTAGG-AGC-TAAGAACACATTC-CCTTCATTAGGATACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * *** *
342665 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCA-TTGTTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
** *
342727 TTAAAAAAGACAAGAATGA--ATTCTCATGCT-A-G-TCC
125 TTAAATGAGAC-A-AATGAGGATTCT-A-G-TAATGATCT
* * * * * *
342762 CCATTCGTTTCATGATTAGGCCCCATCAACTTTCTCTTCTCATAAGGATACACGATATTGATGCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * * **
342827 TTGGTTACGTAAGAAAG-GCTTTCTTGCCACCAATTTTTGTAAACTCTAAGTTCGTGCCTCCAAT
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
* * **
342891 GAGACAAACGACGATTCTAGTGCTGATCT
131 GAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * *
342920 TCATACATTTT-GTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAAACAATATTGTTGA
1 CCATTC-TTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATG-
* ** ** * * *** ** * *
342984 TTTTCTTTTC-CGTTGAAA-TCTTTTCTTTGCACTGGTTTTCATAATA-TCAAAATTCAT-CCAT
64 CTTTGGTTTCGC-AAGAAAGTGTTTTCTTTCCACCAATTTTTGTAA-AGTCAAAGTTCGTGCC-T
*
343045 TAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCT
126 TAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCT
* * * ** * * ** * *
343079 CCACTT-TTTTCGAGATTAGGAAGCA-AAAGCACATTCCAT-TCATTAGGATACATAACATTGAA
1 CCA-TTCTTTTCGTGATTAGGCACCATAAA-C-TTTTTCTTCTCATTAGGATACACGATATTGAT
* * ** * *
343141 GCTTT-GTTGTTGCAAGAAAATGTTTTCTTTCCACCGTTTTTTATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTT-TCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTA-AAGTCAAAGTTCGTGC-C
* * * * *
343203 TTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCC
125 TTAAATGAGACAAATGAGGATTCTAGTAATG---ATCT
* * * * * *
343238 CCACTCTTTTCATGATTAGGCACCATAAACTTTGTCTTCTCATAAGGATACACAATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * *
343303 TTGGTCTCGTAAGAAAG-GGTTTCTTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA
66 TTGGTTTCGCAAGAAAGTGTTTTCTT-TCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAA
* * * *
343366 TGGGAGAAATGAGGATTCTTGTAGTGATCT
130 TGAGACAAATGAGGATTCTAGTAATGATCT
* * * * * * * * *
343396 TCATTCTTTTTGTGATTAGGTACTATAAACACATTTTC--CTCATTAGGATAAATGATATTCACG
1 CCATTCTTTTCGTGATTAGGCACCAT-AA-ACTTTTTCTTCTCATTAGGATACACGATATTGATG
* ** * * * * * * * * * * * * *
343459 ATTTTCTTTTGCATGGAACTCTTTTATTT-CGCC-TTTTTTCCTTAATA-TCAAAATTCATACCA
64 CTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTT--GTAA-AGTCAAAGTTCGTGCCT
* * **
343521 T-AATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCT
126 TAAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * ** * * * * **
343555 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTCCGT-TCATTAGGAAACATGGCATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AAC-TTTTTCTTCTCATTAGGATACACGATATTGAT
* * ** * * *
343617 GCTTTAGTGTAACAAGAAAATGTTTTATTTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* * * * *
343679 TTAAATAAGATAGGCATGA--A-T-T-GTCATGCTAGTCC
125 TTAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCT
* * * * * *
343714 CCATTCGTTTCATGATTAGGCTCCATCAACTTTGTT-TTCTCATAAGGATACACGATATTGATTC
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTT-TTCTTCTCATTAGGATACACGATATTGATGC
* * * *
343778 TTTGGTTTCGTAAGAAAG-GGTTTCTTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAA
65 TTTGGTTTCGCAAGAAAGTGTTTTCTT-TCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAA
343841 ATGAGACAAATGAGGATTCTAGTAATGATCT
129 ATGAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
343872 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAACGATATTCACGAT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
** * * * * * * * * ** * *
343937 TTTCTTTTGCATGAAAATCTTTTCTTTGC-GCTATTTTACT-TAATA-TCAAAATTTATCCCAT-
66 TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCTTA
* * *
343998 AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
128 AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * *** * * * *
344031 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * * *
344093 GCTTTGGTGTCGCAAGAAAATGTTTTCTTGCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* ** * * ** * *
344155 TTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCC
125 TTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * * * *
344191 CCATTCTTTTCATGATTAGGCACCATTAACTTTGTCTACTCATCAGGATACACGATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * * *
344256 TTGGTTTCGTAAGAAAAG-GTTTCCTGT-CACCAAATTTTGTAAAGTCTAAGTTCGTGCCTCAAA
66 TTGGTTTCGCAAG-AAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAA
344319 TGAGACAAATGAGGATTCTAGTAATGATCT
130 TGAGACAAATGAGGATTCTAGTAATGATCT
* * * *** * * * * * *
344349 TCATTCTTTTTGTGATTAGGCACTATAAACACATTCTCCTC-TCCAGGATAAACGATATTCACGA
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCAT-TAGGATACACGATATTGATGC
** * * * * * * * * * *
344413 TTTTCTTTTGCATGGAAA-TATTTTCTTTGC-GCTATTTTCCT-TAATA-TCAAAATTCATCCCA
65 TTTGGTTTCGCA-AGAAAGTGTTTTCTTTCCACCAATTTT--TGTAA-AGTCAAAGTTCGTGCCT
* * *
344474 T-AATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCT
126 TAAATGA-GACAAATG-A-GGATTCTAGTAATGA-TCT
* * * *** * * * *
344508 CCATTCTTTTCGAGATT-GGGAGC-TAAGAACACATTC-CCTTCATTAGGAAACATGACATTGAT
1 CCATTCTTTTCGTGATTAGGCACCAT-A-AACTTTTTCTTC-TCATTAGGATACACGATATTGAT
* * *
344570 GCTTTGGTGTCGCAAGAAAATGTTTTCTTTCCACC-ATTTTTGATAGAAGT-AAAGTTTGT-CTC
63 GCTTTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTG-TA-AAGTCAAAGTTCGTGC-C
* ** * * ** * *
344632 TTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCC
125 TTAAATGAGAC-AAATGAGGATTCT-AGTAATGATCT
* * * * * *
344668 CCATTCTTTTCATGATTAGGCACCATCAGCTTTGTCTTCTCATCAGGATACACGATATTGATTCT
1 CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
* * * * *
344733 TTGGTTTCGTAAGAAAAG-GTTTCCTGT-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAA
66 TTGGTTTCGCAAG-AAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAA
344796 TGAGACAAATGAGGATTCTAGTAATGATCT
130 TGAGACAAATGAGGATTCTAGTAATGATCT
* ** *
344826 TCATTCTTTTTTTGATTAGGCACTATAAAC
1 CCATTCTTTTCGTGATTAGGCACCATAAAC
344856 ACATTCTCCT
Statistics
Matches: 6351, Mismatches: 2019, Indels: 1420
0.65 0.21 0.15
Matches are distributed among these distances:
155 1 0.00
156 50 0.01
157 185 0.03
158 2170 0.34
159 2970 0.47
160 820 0.13
161 129 0.02
162 21 0.00
163 5 0.00
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.37
Consensus pattern (159 bp):
CCATTCTTTTCGTGATTAGGCACCATAAACTTTTTCTTCTCATTAGGATACACGATATTGATGCT
TTGGTTTCGCAAGAAAGTGTTTTCTTTCCACCAATTTTTGTAAAGTCAAAGTTCGTGCCTTAAAT
GAGACAAATGAGGATTCTAGTAATGATCT
Found at i:354377 original size:158 final size:156
Alignment explanation
Indices: 348500--385311 Score: 4776
Period size: 159 Copynumber: 232.1 Consensus size: 156
348490 TCTCATCAAA
* * * *
348500 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * *
348565 AAGTTCGTGCCTCAAATGAGGCAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
348630 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * *** ** ** * * * * *** *
348658 ATAAATGATATTCACGATTTTCTTTTGTATGGAAA-TCTTTTCTTTGC-GTTTTTTTCCTTAATA
1 ATACATGATATTGATTCTTTGGTTTCATA-AGAAAGGCTTTCCTGT-CACCATTTTT--GTAA-A
* * * * * **
348721 -TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTTTTC
61 GTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTTTTC
* *
348781 GAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
121 GTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * *
348817 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * *
348881 T-AAAGTTTGTCTCTAAAATGAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * * *
348940 ATGATTAGGCCCCAT-CA-ACTTTCTCTTCTCATAAGG
121 GTGATTAGGCACTATAAACACATTCTC--CTCATTAGG
* ** * * * * *
348976 ATACACGATATTGAGGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * *
349041 AAGTTCGTGCCTCAAATGAAACTAATGAGGATTCTAGTAACGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
349106 GCACTATAAACACATTCTCCT-GTTGAGG
129 GCACTATAAACACATTCTCCTCATT-AGG
* * * * * * * *
349134 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * *
349193 AAAATCAAAATTCAT-CTCATAATTATGAC-AA-GATCGATTCT-CTAA-GAGTCTCCATTCTTT
58 AAAGTCAAAGTTCGTCCTCA-AATGA-GACAAATGA-GGATTCTAGTAATGA-TCTCCATTCTTT
* ** *
349253 TCGAGATTAGGGGCTA-AGAACACATTC-CATTCATTAGG
119 TCGTGATTAGGCACTATA-AACACATTCTC-CTCATTAGG
* * * * * ** * * * * *
349291 AAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCTCCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * *
349355 T-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATT-TGTTT
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCT-TTT
* * ** * *
349413 CATGATTAGGCACCCAT-AAC-TTTGTCTTCTCATAAGG
120 CGTGATTAGGCA-CTATAAACACAT-TCTCCTCATTAGG
* * * * * *
349450 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTATCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * * *
349515 AAGTTCATGCCTCCAATGAGGCAAACGAGGATTCTAGTACTG-TCTTCATACATTTT-GTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
* * * *
349578 GGCACTATAAACACGTTGTCCTTACTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
349607 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* * * ** * *
349666 AATA-TCAAAATTCATCC-CATAATTATGA-AAACCATCGATTCTCGTAA-GAGTCTCCATTCTT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATGA-GGATTCTAGTAATGA-TCTCCATTCTT
*
349727 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* ** * * ** * * * ***
349766 ATACATGACATTGAAGCTTTAGTGTCGCAAGAAAATG-TTTTCTTTCCATTGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * ** * *
349830 T-AAAGTTTGTCTCTTAAAAAAGACAAGCATGA--ATTCTCATGCT-A-G-TCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCT-A-G-TAATGATCTCCATTCTTTTC
* * * * * *
349889 ATGATTAGGCCCCAT-CA-ACTTTCTCTTCTCATAAGG
121 GTGATTAGGCACTATAAACACATTCTC--CTCATTAGG
* * * * * * *
349925 ATACACGATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * ** * *
349990 AAGTTCGTGCCTCCAATGAGACAAACGACGATTCTAGTGCTGATCTTCATACATTTT-GTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
*
350054 GGCACTATAAACACGTTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* ** ** * * * * * ** **
350083 ATAAACAATATTGATGAT-TTTATTTTCCGT-TGAAA-TCTTTTCTTTGCACTGTTTTCCATAAT
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT-TGTAA-
* * * *
350145 A-TCAAAATTCATCCATTAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCTCCACTT-T
60 AGTCAAAGTTCGTCC-TCAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCTCCA-TTCT
* * *
350202 TTTCGAGATTAGGAAGC-A-AAAGCACATTC-CATTCATTAGG
117 TTTCGTGATTAGGCA-CTATAAA-CACATTCTC-CTCATTAGG
* * * * * * *
350242 ATACATGACATTGATGCTTTGGTGTTGC--AAGAAAATG-TTTTCTTTCCACCGTTTTTTATAGA
1 ATACATGATATTGATTCTTTGGT-TT-CATAAG-AAAGGCTTTCCTGT-CACC-ATTTTTGTA-A
* * * * * * *
350304 AGT-AAAGTTTGTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCCCCATTCTTTTC
60 AGTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCTAGTAATG---ATCTCCATTCTTTTC
* * * ** * * **
350365 ATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAAA
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
350401 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
350466 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
350531 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * *** ** ** * * * * * * *
350559 ATAAATGATATTCACGATTTTCTTTTGTATGGAAA-TCTTTTCTTTGC-GCTTTTTTCCTTAATA
1 ATACATGATATTGATTCTTTGGTTTCATA-AGAAAGGCTTTCCTGT-CACCATTTTT--GTAA-A
* * * * *
350622 -TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCTTTTC
61 GTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTTTTC
** *
350682 AAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
121 GTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * * ** * * * * *
350718 AAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCTCCGTTTTTGATAGAA-
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * *
350781 TTAAAGTTCGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATT-TGTTT
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCT-TTT
* * ** * * *
350840 CATGATTAGGCACCCAT-AAC-TTTGTCTTCTCGTAAGG
120 CGTGATTAGGCA-CTATAAACACAT-TCTCCTCATTAGG
* * * * *
350877 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * ** * * *
350942 AAGTTCGTACCTCCAATGAGTCAAACGAGGATTCTAGTGCTGATCTTCATACATTTT-TTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
* * * *
351006 GGCACTATAAACCCGTTGTCCTTATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * ** *
351035 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CTTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* * * ** * *
351094 AATA-TCAAAATTCATCC-CATAATTATGA-AAACCATCGATTCTCGTAA-GAGTCTCCATTCTT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATGA-GGATTCTAGTAATGA-TCTCCATTCTT
*
351155 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* ** * * ** * * * ***
351194 ATACATGACATTGAAGCTTTAGTGTCGCAAGAAAATG-TTTTCTTTCCATTGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * ** *
351258 T-AAAGTTTGTCTCTTAAAAAAGACAAGCATGA--ATTCTCATGCT-A-G-TC-CCGATTCGTTT
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCT-A-G-TAATGATCTCC-ATTCTTTT
* * ** * * *
351316 CATGATTAGGCCCCGT-CA-ACTTTCTCTTCTCATAAGG
120 CGTGATTAGGCACTATAAACACATTCTC--CTCATTAGG
* * * * * * *
351353 ATACACGATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * ** * *
351418 AAGTTCGTGCCTCCAATGAGACAAACGACGATTCTAGTGCTGATCTTCATACATTTT-GTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
*
351482 GGCACTATAAACACGTTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* ** ** * * * * * ** **
351511 ATAAACAATATTGATGAT-TTTCTTTTCCGT-TGAAA-TCTTTTCTTTGCACTGTTTTCCATAAT
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT-TGTAA-
* * * *
351573 A-TCAAAATTCATCCATTAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCTCCACTT-T
60 AGTCAAAGTTCGTCC-TCAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCTCCA-TTCT
* * *
351630 TTTCGAGATTAGGAAGC-A-AAAGCACATTC-CATTCATTAGG
117 TTTCGTGATTAGGCA-CTATAAA-CACATTCTC-CTCATTAGG
* * * * * * *
351670 ATACATGACATTGATGCTTTGGTGTTGC--AAGAAAATG-TTTTCTTTCCACCGTTTTTTATAGA
1 ATACATGATATTGATTCTTTGGT-TT-CATAAG-AAAGGCTTTCCTGT-CACC-ATTTTTGTA-A
* * * * * * *
351732 AGT-AAAGTTTGTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCCCCATTCTTTTC
60 AGTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCTAGTAATG---ATCTCCATTCTTTTC
* * * ** * * **
351793 ATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAAA
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
351829 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * *
351894 AAGTTCGTGCCTCAAATGAGGCAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
351959 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * *** ** ** * * * * *** *
351987 ATAAATGATATTCACGATTTTCTTTTGTATGGAAA-TCTTTTCTTTGC-GTTTTTTTCCTTAATA
1 ATACATGATATTGATTCTTTGGTTTCATA-AGAAAGGCTTTCCTGT-CACCATTTTT--GTAA-A
* * * * * **
352050 -TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GATTCTCCATTCTTTTC
61 GTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTTTTC
* *
352110 GAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
121 GTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * * ** * * * * *
352146 AAACAAGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCTCCGTTTTTGATAGAA-
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * *
352209 TTAAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATT-TGTTT
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCT-TTT
* * ** * * *
352268 CATGATTAGGCACCCAT-AAC-TTTGTCTTCTCGTAAGG
120 CGTGATTAGGCA-CTATAAACACAT-TCTCCTCATTAGG
* * * * *
352305 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * ** * * *
352370 AAGTTCGTGCCTCCAATGAGTCAAACGAGGATTCTAGTGCTGATCTTCATACATTTT-TTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
* * * *
352434 GGCACTATAAACCCGTTGTCCTTATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
352463 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* * * *** * * *
352522 AATA-TCAAAATTCATCC-CATAATTATGA-AACCCATCGATTCTCGTAA-GAGTTTCCATTCTT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATGA-GGATTCTAGTAATGA-TCTCCATTCTT
*
352583 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * * **
352622 ATACATGACATTGATGCTTTAGTGTCGCAAGAAAATG-TTTTCTTTCCACTGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* ** *
352686 T-AAAG-TCTGTCTCTTAAAAAAGACAAGCATGA--ATTCTCATGCT-A-G-TC-CCAATTCGTT
62 TCAAAGTTC-GTC-CTCAAATGAGACAA--ATGAGGATTCT-A-G-TAATGATCTCC-ATTCTTT
* * * * * *
352743 TCATGATTAGGCCCCAT-CA-ACTTTCTCTTCTCATAAGG
119 TCGTGATTAGGCACTATAAACACATTCTC--CTCATTAGG
* * * * * * *
352781 ATACACGATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * ** * *
352846 AAGTTCGTGCCTCCAATGAGACAAACGACGATTCTAGTGCTGATCTTCATACATTTT-GTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
*
352910 GGCACTATAAACACGTTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* ** ** * * * * * ** **
352939 ATAAACAATATTGATGAT-TTTCTTTTCCGT-TGAAA-TCTTTTCTTTGCACTGTTTTCCATAAT
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT-TGTAA-
* * * *
353001 A-TCAAAATTCATCCATTAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCTCCACTT-T
60 AGTCAAAGTTCGTCC-TCAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCTCCA-TTCT
* * *
353058 TTTCGAGATTAGGAAGC-A-AAAGCACATTC-CATTCATTAGG
117 TTTCGTGATTAGGCA-CTATAAA-CACATTCTC-CTCATTAGG
* * * * * * *
353098 ATACATGACATTGATGCTTTGGTGTTGC--AAGAAAATG-TTTTCTTTCCACCGTTTTTTATAGA
1 ATACATGATATTGATTCTTTGGT-TT-CATAAG-AAAGGCTTTCCTGT-CACC-ATTTTTGTA-A
* * * * * * * *
353160 AGT-AAAGTTTGTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCCCCACTCTTTTC
60 AGTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCTAGTAATG---ATCTCCATTCTTTTC
* * ** * *
353221 ATGATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * * * *
353257 ATACACAATATTGATTCTTTGGTCTCGTAAGAAAGGGTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
353322 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
353387 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * ** ** * * * *
353415 ATAAATGATATTCACGATT-TTCT--TTTGCAT--GGAACTCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
353475 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
353535 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * * **
353574 ATACATGACATTGATGCTTTAGTGTCGCAAGAAAATG-TTTTCTTTCCACTGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* ** * *
353638 T-AAAG-TCTGTCTCTTAAAAAAGACAAGCATGA--ATTCTCATGCT-A-G-TCCCCATTCGTTT
62 TCAAAGTTC-GTC-CTCAAATGAGACAA--ATGAGGATTCT-A-G-TAATGATCTCCATTCTTTT
* * * ** * *
353696 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
353733 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * *
353797 TAAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
353862 GGGACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
353891 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
353951 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
354011 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * * *
354050 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * ** * * *
354114 T-AAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATGA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTGA
* ** * * *
354177 TTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
125 TTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
354209 ATACATGATATTGATTCTTTGGTTTCATACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
354274 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
354339 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * *
354367 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * *
354426 AATA-TC-AAGAATCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTCTCCATTC
58 AA-AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTC
* * *
354485 TTTTCGAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
354526 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * *
354590 T-AAAGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
354650 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
354685 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
354750 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
354815 GAACTATAAACACATTCTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
354843 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
354903 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
354963 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * *
355002 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * *
355066 T-AAAGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
355126 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
355161 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
355226 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
355291 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
355319 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
355379 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* * *
355439 TTCGAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
355478 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * *
355542 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
355601 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
355637 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
355702 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
355767 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
355795 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* * * *** * *
355854 AATA-TCAAAATTCATCC-CATAATTATGA-AACCCATCGATTCTCGTAA-GAGTCTCCATTCTT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATGA-GGATTCTAGTAATGA-TCTCCATTCTT
*
355915 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * * **
355954 ATACATGACATTGATGCTTTAGTGTCGCAAGAAAATG-TTTTCTTTCCACTGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* ** * *
356018 T-AAAG-TCTGTCTCTTAAAAAAAACAAGCATGA--ATTCTCATGCT-A-G-TC-CCAATTCGTT
62 TCAAAGTTC-GTC-CTCAAATGAGACAA--ATGAGGATTCT-A-G-TAATGATCTCC-ATTCTTT
* * * * * *
356075 TCATGATTAGGCCCCAT-CA-ACTTTCTCTTCTCATAAGG
119 TCGTGATTAGGCACTATAAACACATTCTC--CTCATTAGG
* * * * * * *
356113 ATACACGATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * ** * *
356178 AAGTTCGTGCCTCCAATGAGACAAACGAGGATTCTAGTGCTGATCTTCATACATTTT-GTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
*
356242 GGCACTATAAACACGTTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* ** ** * * * * * **
356271 ATAAACAATATTGATGAT-TTTCTTTTCCGT-TGAAA-TCTTTTCT-TCGCACAGTTTTCCATAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGTCAC-CA-TTTT-TGTAA
* * * *
356332 TA-TCAAAATTCATCCATTAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCTCCACTT-
60 -AGTCAAAGTTCGTCC-TCAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCTCCA-TTC
* * * * *
356389 TTTTTGAGATTAGGAAGC-AAAAACACATTC-CATTCATTAGG
116 TTTTCGTGATTAGGCA-CTATAAACACATTCTC-CTCATTAGG
* * * * * * *
356430 ATACATGACATTGATGCTTTGGTGTTGC--AAGAAAATG-TTTTCTTTCCACCGTTTTTTATAGA
1 ATACATGATATTGATTCTTTGGT-TT-CATAAG-AAAGGCTTTCCTGT-CACC-ATTTTTGTA-A
* * * * * * * *
356492 AGT-AAAGTTTGTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCCCCACTCTTTTC
60 AGTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCTAGTAATG---ATCTCCATTCTTTTC
* * ** * *
356553 ATGATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
356589 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
356654 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
356719 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * *
356747 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCT-TTACGCTATTTTCCT-
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCAC-C-ATTTT--TG
* * * *
356805 TAATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCA-TAA-GAGTCTCCATT
57 TAA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCT-AGTAATGA-TCTCCATT
* * * * * *
356864 CTTTTTGAGATT-GGGAGCTA-AGAACACAATCACTTCATTAGG
115 CTTTTCGTGATTAGGCA-CTATA-AACACATTCTCCTCATTAGG
* * * * ** * * *
356906 AAACATGACATTGATACTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * ** * * ** * * *
356970 T-AAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTC-CTCAAATGAGAC-AAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* * ** * *
357033 ATTAGGCACCATTAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
357066 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
357131 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
357196 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
357224 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTACT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * *
357283 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
* *
357343 TTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
357383 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * * * *
357446 GT-AAAGTTTGTCTCTTAAATAAGACAACCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTT
61 GTCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTT
* * * ** * *
357505 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
357542 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * *
357606 TAAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTC-TTTCTGTGATT
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTC-GTGATT
*
357670 AGGGACTATAAACACATTCTCCTCATTAGG
127 AGGCACTATAAACACATTCTCCTCATTAGG
* * ** ** * * ** * * * *
357700 ATAAATGATATTCATGAATTTCTTTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTAATA
1 ATACATGATATTGAT-TCTTTGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTAA-A
* * * * **
357763 -TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTTTTC
61 GTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTTTTC
* *
357823 -TAGATTAGG-AGT-TAAGAACACATTC-CCTTCCTTAGG
121 GT-GATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * * ** * * * *
357859 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
** * * * * * ** * * *
357923 T-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATGA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTGA
* ** * * *
357986 TTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
125 TTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
358018 ATACATGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * *
358083 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGAGTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
358148 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * * *
358176 ATAAACGATATTCATGAT-TTTCTTTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-TAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTAA
* * * * * *
358237 TA-TC-AAGATTCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTCTCCATTCGT
60 -AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCTT
* *
358296 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * *
358335 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * *
358399 T-AAAGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
358459 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
358494 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * * *
358559 AAGTTCATGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
358624 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * ** * * * *
358652 ATAAATGATATTCACGA-T-TTTGTTTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTAA
1 ATACATGATATT---GATTCTTTGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTAA
* * * * * **
358713 TA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTTT
60 -AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTTT
* * *
358773 TCGAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
119 TCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** * *
358811 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTTATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCA-TTTTTGTA-AAG
* * * * * * * *
358875 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTCGTCCCCGTTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATGATC-T--CCATTCTTTTC
* * * * ** * * *
358934 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
358970 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
359035 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
359100 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
359128 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * * *
359187 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
* *
359247 TTTCGAGATTAGG-AGT-TAAGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * ** * * *
359287 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * * *
359350 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
359413 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
359446 ATACACGACATTGGTTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
359511 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* * *
359576 GTACTATACACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
359604 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCC-TTCTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATT-TTT--GT
* * * * **
359663 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
*
359723 TTTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * * **
359763 ATACATGACATTGATGCTTTAGTGTCGCAAGAAAATG-TTTTCTTTCCACTGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* ** *
359827 T-AAAG-TCTGTCTCTTAAAAAAGACAAGCATGA--ATTCTCATGCT-A-G-TC-CCAATTCGTT
62 TCAAAGTTC-GTC-CTCAAATGAGACAA--ATGAGGATTCT-A-G-TAATGATCTCC-ATTCTTT
* * * * * *
359884 TCATGATTAGGCCCCAT-CA-ACTTTCTCTTCTCATAAGG
119 TCGTGATTAGGCACTATAAACACATTCTC--CTCATTAGG
* * * * * * *
359922 ATACACGATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * ** * *
359987 AAGTTCGTGCCTCCAATGAAACAAACGAGGATTCTAGTGCTGATCTTCATACATTTT-GTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
*
360051 GGCACTATAAACACGTTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* ** ** * * * * **
360080 ATAAACAATATTGATGAT-TTTCTTTTCCAT-TGAAA-TCTTTTCTTTGCA-CAGTTTTCCATAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCA-TTTT-TGTAA
* * * *
360141 TA-TCAAAATTCATCCATTAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCTCCACTT-
60 -AGTCAAAGTTCGTCC-TCAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCTCCA-TTC
* * * *
360198 TTTTTGAGATTAGGAAGC-A-AAAGCACATTC-CATTCATTAGG
116 TTTTCGTGATTAGGCA-CTATAAA-CACATTCTC-CTCATTAGG
* * * * * * *
360239 ATACATGACATTGATGCTTTGGTGTTGC--AAGAAAATG-TTTTCTTTCCACCGTTTTTTATAGA
1 ATACATGATATTGATTCTTTGGT-TT-CATAAG-AAAGGCTTTCCTGT-CACC-ATTTTTGTA-A
* * * * * * * *
360301 AGT-AAAGTTTGTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCCCCACTCTTTTC
60 AGTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCTAGTAATG---ATCTCCATTCTTTTC
* * ** * *
360362 ATGATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
360398 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
360463 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
360528 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
360556 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * *
360615 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCA-TAA-GAGTCTCCATTC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCT-AGTAATGA-TCTCCATTC
* * * * *
360674 TTTTTGAGATT-GGGAGCTA-AGAACACATTCACTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTCCTCATTAGG
* * * * ** * * * *
360715 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATGGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-T-AAAG
* * * ** * * ** * * *
360779 T-AAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTC-CTCAAATGAGAC-AAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* * ** * *
360842 ATTAGGCACCATTAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
360875 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
360940 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
361005 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
361033 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTACT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * *
361092 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
* *
361152 TTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
361192 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * ** * * * * * *
361255 GT-AAAGTTTGTCTCTTAAATAAGAC-AACCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
361316 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
361351 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
361416 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
361481 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
361509 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
361569 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** * *
361629 TTCAAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
361668 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * *
361732 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCCTTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
361791 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
361827 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGACTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
361892 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
361957 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
361985 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * * *
362044 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
* *
362104 TTTCGAGATTAGG-AGT-TAAGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * ** * * *
362144 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * * *
362207 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
362270 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * * *
362303 AAACACGACATTGGTTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * *
362368 AAGTTCGTGCCTCAAATGAGACAAATGGGGATTCTAGTGATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
362433 GCACAATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * * * *
362461 ATAAACGGTATTCACGATT-TTT-TTTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-TA
1 ATACATGATATT---GATTCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTA
* * * * * *
362521 ATA-ACAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
362581 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * *
362620 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * *
362684 T-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * ** * *
362743 ATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
362779 ATACACGATATTGATTCTTTGGTTT-AGTAAGTATGGCTTTCTTGTCACCAATTTTTGTATAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * *
362843 TAAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
362908 GGGACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
362937 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
362997 ATA-TCAAAATTCATCC-CATAATTAAGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AA-TGAGACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* ** *
363057 TTCGAGATTAGG-AGCTACGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATAAACACATTCTCC-TCATTAGG
* * ** * * * *
363096 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
* * * * * * * ** * * *
363159 GT-AAAGTTTGACCCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCG-TCCTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * * *
363222 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
363255 ATACATGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
363320 AAGTTCCTGCCTCAAATGAGACAATTAAGGGTTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
363385 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
363413 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * * **
363472 AATA-TCAAAATTCAT-ATTATAATTATGA-AAA-GCATAGATTCTCCTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
* *
363532 TTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTCCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCCT-CATTAGG
* * * * ** * * * ** *
363572 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCAGATTTGATAGATG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * ** * * ** * * *
363636 T-AAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTC-CTCAAATGAGAC-AAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* *** * *
363699 ATTAGGCACCATAAA-TTTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
363732 ATACACGATATTGATGCTTTGATTTCATAAGAAAGGCTTTCTTGCCACCATTTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACCA-TTTTTGTAAAGTCA
* * * * *
363797 AAGTTCGTACCTCAAATGGGAGAAATGAGGATTCCT-GTAGTGATCTTCATTCTTTTTGTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATT-CTAGTAATGATCTCCATTCTTTTCGTGATTA
*
363861 GGTACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
363890 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
363950 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
364010 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * * *
364049 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * ** * * *
364113 T-AAAGTTTG-CCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTCCTC--AAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* * ** * *
364175 ATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
364208 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
364273 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
364338 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * ** * * * *
364366 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * ** *
364426 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCAT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* * *
364486 TTCGAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * *
364525 AAACATGGCATTGATGCTTTGGTGTCACAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * *
364589 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
364648 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
364684 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
364749 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* **
364814 GTACTATAAACACATTCTCCTTTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
364842 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * *
364901 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
*
364961 TTTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * ** * * *
365001 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * *
365064 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCTCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
365127 ATTAGGCACCATAAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
365160 ATACACGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
365225 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
365290 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * * *
365318 ATAAACGATATTCATGAT-TTTCTTTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-TAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTAA
* * * * *
365379 TA-TC-AAGATTCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTCTCCATTCTT
60 -AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCTT
* *
365438 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
365477 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * * * *
365540 GT-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTT
61 GTCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTT
* * * ** * *
365599 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
365636 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * * *
365700 TAAGTTCGTGCCTCTAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
365765 GGCACTATAAACACATTCTCCTCTTTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
365794 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
365854 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** *
365914 TTCAAGATTAGG-AGCTA-AGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * * * * *
365953 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * ** * * *
366017 T-AAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATGA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTGA
* ** * * *
366080 TTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
125 TTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
366112 ATACATGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
366177 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
366242 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * *
366270 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * * *
366329 AATA-TC-AAGAATCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTTTCCATTC
58 AA-AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTC
* *
366388 TTTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * *
366429 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * * *
366493 T-AAGGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
366553 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * * *
366588 ATACACAATATTGATTCTTTGGTTTCGTAAGAAGGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
366653 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
366718 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
366746 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
366806 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** * *
366866 TTCAAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
366905 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * *
366969 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCCTTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
367028 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
367064 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGACTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
367129 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
367194 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
367222 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * * *
367281 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
* *
367341 TTTCGAGATTAGG-AGT-TAAGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * ** * * *
367381 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * * *
367444 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
367507 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * * *
367540 AAACACGACATTGGTTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * *
367605 AAGTTCGTGCCTCAAATGAGACAAATGGGGATTCTAGTGATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
367670 GCACAATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * * * *
367698 ATAAACGGTATTCACGATT-TTT-TTTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-TA
1 ATACATGATATT---GATTCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTA
* * * * * *
367758 ATA-ACAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
367818 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * *
367857 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * *
367921 T-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * ** * *
367980 ATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
368016 ATACACGATATTGATTCTTTGGTTT-AGTAAGTATGGCTTTCTTGTCACCAATTTTTGTATAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * *
368080 TAAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
368145 GGGACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
368174 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
368234 ATA-TCAAAATTCATCC-CATAATTAAGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AA-TGAGACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* ** *
368294 TTCGAGATTAGG-AGCTACGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATAAACACATTCTCC-TCATTAGG
* * ** * * * *
368333 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
* * * * * * * ** * * *
368396 GT-AAAGTTTGACCCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCG-TCCTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * * *
368459 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
368492 ATACATGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
368557 AAGTTCCTGCCTCAAATGAGACAATTAAGGGTTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
368622 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
368650 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * * **
368709 AATA-TCAAAATTCAT-ATTATAATTATGA-AAA-GCATAGATTCTCCTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
* *
368769 TTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * * ** *
368809 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCAGATTTGATAGATG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * ** * * ** * * *
368873 T-AAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTC-CTCAAATGAGAC-AAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* *** * *
368936 ATTAGGCACCATAAA-TTTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
368969 ATACACGATATTGATGCTTTGATTTCATAAGAAAGGCTTTCTTGCCACCATTTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACCA-TTTTTGTAAAGTCA
* * * * *
369034 AAGTTCGTACCTCAAATGGGAGAAATGAGGATTCCT-GTAGTGATCTTCATTCTTTTTGTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATT-CTAGTAATGATCTCCATTCTTTTCGTGATTA
*
369098 GGTACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
369127 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
369187 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
369247 TTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * * *
369286 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * ** * * *
369350 T-AAAGTTTG-CCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTCCTC--AAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* * ** * *
369412 ATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
369445 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
369510 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
369575 GCACTATAAACACATTCTCTTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
369603 ATAAACGATATTCATGAT-TTTCTTTTGCAT-GGAAA-GCTTTTCTTTGCACTATTTTCCT-TAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTAA
* * * * * **
369664 TA-TC-AAGATTCAT-ATTATAATTATGACAACCAT--CGATTCTCCTAA-GAGTCTCCATTCTT
60 -AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCTT
* * *
369723 TTCGAGATTAGG-AGCTA-AGAACAAATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * * *
369762 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * ** * * *
369826 T-AAAGTTTG-CCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTCCTC--AAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* * ** * *
369888 ATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
369921 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
369986 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
370051 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * *
370079 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * * *
370138 AATA-TC-AAGAATCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTTTCCATTC
58 AA-AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTC
* *
370197 TTTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * *
370238 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * * *
370302 T-AAGGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
370362 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * * *
370397 ATACACAATATTGATTCTTTGGTTTCGTAAGAAGGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
370462 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
370527 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
370555 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
370615 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** * *
370675 TTCAAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
370714 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * *
370778 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCCTTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
370837 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
370873 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGACTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
370938 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
371003 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
371031 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * * * *
371090 AATA-TCAAAATTTATCC-CATAATTATGACAGCCAT--CGATTCTCGTAA-GAGTCTCCATTCC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACA--AATGAGGATTCTAGTAATGA-TCTCCATTCT
* *
371150 TTTCGAGATTAGG-AGT-TAAGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * ** * * *
371190 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * * *
371253 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
371316 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * * *
371349 AAACACGACATTGGTTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * *
371414 AAGTTCGTGCCTCAAATGAGACAAATGGGGATTCTAGTGATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
371479 GCACAATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * * * *
371507 ATAAACGGTATTCACGATT-TTT-TTTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-TA
1 ATACATGATATT---GATTCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTA
* * * * * *
371567 ATA-ACAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
371627 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
371666 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * * * *
371729 GT-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTT
61 GTCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTT
* * * ** * *
371788 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
371825 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * * *
371889 TAAGTTCGTGCCTCTAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
371954 GGCACTATAAACACATTCTCCTCTTTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * ** * * * *
371983 ATAAACGATATTCATGAT-TTTCTTTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTAAT
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTAA-
* * * * * ** *
372045 A-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCATTT
60 AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTTTT
* * *
372105 CGAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
120 CGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * *
372142 AAACATGGCATTGATGCTTTGGTGTCACAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * *
372206 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
372265 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
372301 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
372366 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* **
372431 GTACTATAAACACATTCTCCTTTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
372459 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * *
372518 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
*
372578 TTTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * ** * * *
372618 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * *
372681 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCTCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
372744 ATTAGGCACCATAAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
372777 ATACACGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
372842 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
372907 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * * *
372935 ATAAACGATATTCATGAT-TTTCTTTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-TAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTAA
* * * * *
372996 TA-TC-AAGATTCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTCTCCATTCTT
60 -AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCTT
* *
373055 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
373094 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * * * *
373157 GT-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTT
61 GTCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTT
* * * ** * *
373216 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
373253 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * * *
373317 TAAGTTCGTGCCTCTAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
373382 GGCACTATAAACACATTCTCCTCTTTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * * *
373411 ATAAACGATATTCATGAT-TTTCTTTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-TAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTAA
* * * * *
373472 TA-TC-AAGATTCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTCTCCATTCTT
60 -AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCTT
* *
373531 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
373570 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * * * *
373633 GT-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTT
61 GTCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTT
* * * ** * *
373692 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
373729 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * *
373793 TAAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
373858 GGGACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
373887 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
373947 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** *
374007 TTCAAGATTAGG-AGCTA-AGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * * * *
374046 ATACATGACATTGATGCTTTGGTGTCGA-AAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTC-ATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
* * * * * * ** * * *
374109 GT-AAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * * *
374172 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
374205 ATACATGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
374270 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
374335 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * *
374363 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGT-ACTATTTTCCT-
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTC-CTGTCACCATTTT--TG
* * * * * *
374421 TAATA-TC-AAGAATCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTCTCCATT
57 TAA-AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATT
* *
374480 CTTTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
115 CTTTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * *
374522 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * *
374586 T-AAAGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
374646 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
374681 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * * *
374746 AAGTTGGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
374811 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
374839 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
374899 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* * *
374959 TTCGAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
374998 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * *
375062 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
375121 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
375157 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * *
375222 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTT-GTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
375286 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
375314 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * * *
375373 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
* *
375433 TTTCGAGATTAGG-AGT-TAAGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * ** * * *
375473 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * * *
375536 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
375599 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
375632 ATACACGACATTGGTTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * *
375697 AAGTTCGTGCCTCAAATGAGACAAATGGGGATTCTAGTGATGATCTTCATTCTTTT-GTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
375761 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * * * *
375789 ATAAACGGTATTCACGATT-TTT-TTTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-TA
1 ATACATGATATT---GATTCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTA
* * * * * *
375849 ATA-ACAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
375909 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * *
375948 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * ** * * * * *
376012 T-AAAGTTTGTCTCTTAAATAAGAC--AGGCACAAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
376072 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
376107 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
376172 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
376237 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
376265 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCC-TTCTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATT-TTT--GT
* * * * **
376324 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
*
376384 TTTCGAGATTAGG-AGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * * **
376424 ATACATGACATTGATGCTTTAGTGTCGCAAGAAAATG-TTTTCTTTCCACTGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* ** *
376488 T-AAAG-TCTGTCTCTTAAAAAAGACAAGCATGA--ATTCTCATGCT-A-G-TC-CCAATTCGTT
62 TCAAAGTTC-GTC-CTCAAATGAGACAA--ATGAGGATTCT-A-G-TAATGATCTCC-ATTCTTT
* * * * * *
376545 TCATGATTAGGCCCCAT-CA-ACTTTCTCTTCTCATAAGG
119 TCGTGATTAGGCACTATAAACACATTCTC--CTCATTAGG
* * * * * * *
376583 ATACACGATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTGCCACCAATTTTTGTAAACTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * ** * *
376648 AAGTTCGTGCCTCCAATGAGACAAACGAGGATTCTAGTGCTGATCTTCATACATTTT-GTGATTA
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTC-TTTTCGTGATTA
*
376712 GGCACTATAAACACGTTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* ** ** * * * * * **
376741 ATAAACAATATTGATGAT-TTTCTTTTCCGT-TGAAA-TCTTTTCTTTGCA-CAGTTTTCCATAA
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCA-TTTT-TGTAA
* * * *
376802 TA-TCAAAATTCATCCATTAAAT-ATGACAAGCATCA--ATTCTCA--AA-GAAGTCTCCACTT-
60 -AGTCAAAGTTCGTCC-TCAAATGA-GACAA--ATGAGGATTCT-AGTAATG-A-TCTCCA-TTC
* * * *
376859 TTTTTGAGATTAGGAAGC-A-AAAGCACATTC-CATTCATTAGG
116 TTTTCGTGATTAGGCA-CTATAAA-CACATTCTC-CTCATTAGG
* * * * * * *
376900 ATACATGACATTGATGCTTTGGTGTTGC--AAGAAAATG-TTTTCTTTCCACCGTTTTTTATAGA
1 ATACATGATATTGATTCTTTGGT-TT-CATAAG-AAAGGCTTTCCTGT-CACC-ATTTTTGTA-A
* * * * * * * *
376962 AGT-AAAGTTTGTCTCTTAAATAAGACAAA-GAAGAAT-T-GTCATGCTAATCCCCACTCTTTTC
60 AGTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCTAGTAATG---ATCTCCATTCTTTTC
* * ** * *
377023 ATGATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
377059 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
377124 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
377189 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
377217 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * *
377276 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCA-TAA-GAGTCTCCATTC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCT-AGTAATGA-TCTCCATTC
* * * * *
377335 TTTTTGAGATT-GGGAGCTA-AGAACACATTCACTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTCCTCATTAGG
* * * * ** * * * *
377376 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATGGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-T-AAAG
* * * ** * * ** * * *
377440 T-AAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTC-CTCAAATGAGAC-AAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* * ** * *
377503 ATTAGGCACCATTAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
377536 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
377601 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
377666 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
377694 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTACT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * *
377753 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
* *
377813 TTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
377853 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * * * *
377916 GT-AAAGTTTGTCTCTTAAATAAGACAACCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTT
61 GTCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTT
* * * ** * *
377975 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
378012 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * * *
378076 TAAGTTCATGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
378141 GGGACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
378170 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
378230 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** *
378290 TTCAAGATTAGG-AGCTA-AGAACACATTC-CCTTCGTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * * * * *
378329 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * ** * * *
378393 T-AAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATGA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTGA
* ** * * *
378456 TTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
125 TTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
378488 ATACATGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
378553 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
378618 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * *
378646 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * * *
378705 AATA-TC-AAGAATCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTTTCCATTC
58 AA-AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTC
* *
378764 TTTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * *
378805 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * * *
378869 T-AAGGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
378929 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
378964 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
379029 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
379094 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
379122 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
379182 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** * *
379242 TTCAAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
379281 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * *
379345 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
379404 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
379440 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGACTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
379505 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
379570 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
379598 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * * *
379657 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
* *
379717 TTTCGAGATTAGG-AGT-TAAGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * ** * * *
379757 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * * *
379820 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
379883 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * * *
379916 AAACACGACATTGGTTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
379981 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
380046 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
380074 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * *
380133 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCA-TAA-GAGTCTCCATTC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCT-AGTAATGA-TCTCCATTC
* * * * *
380192 TTTTTGAGATT-GGGAGCTA-AGAACACATTCACTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTCCTCATTAGG
* * * * ** * * * *
380233 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATGGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-T-AAAG
* * * ** * * ** * * *
380297 T-AAAGTTTGTCTCTTAAATAAGACAAAAAAAGTATTGTCA-TGCTAATCCCCATTCTTTTCATG
62 TCAAAGTTCGTC-CTCAAATGAGAC-AAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* * ** * *
380360 ATTAGGCACCATTAAC-TTTGTCTTCTCATCAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
380393 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGGGTTTCCAGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
380458 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
380523 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
380551 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTACT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * *
380610 AATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
* *
380670 TTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * *
380710 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TATT-CTTTCCACCATTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCT-TTCCTGT-CACCATTTTTG-TA-AA
* * * * * *
380773 GT-AAAGTTTGTCTCTTAAATAAGACAACCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTT
61 GTCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTT
* * * ** * *
380832 CATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
120 CGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
380869 ATACACGATATTGATTCTTTGGTTT-AGTAAGTAAGGCTTTCTTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * * *
380933 TAAGTTCATGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
380998 GGGACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
381027 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
381087 ATA-TCAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** *
381147 TTCAAGATTAGG-AGCTA-AGAACACATTC-CCTTCGTTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * * * * *
381186 ATACATGACATTGATGCTTTGGTGTCGTAAGAAAATG-TTTTCTTTCCACCGTTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * ** * * *
381250 T-AAAGTTTGTCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATGA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTGA
* ** * * *
381313 TTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
125 TTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
381345 ATACATGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* *
381410 AAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
381475 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * *
381503 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCACTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * * *
381562 AATA-TC-AAGAATCAT-ATTATAATTATGACAAGCAT-A-GATTCTCGTAA-GAGTTTCCATTC
58 AA-AGTCAAAG-TTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTC
* *
381621 TTTTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
116 TTTTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * ** * * *
381662 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * * * * * *
381726 T-AAGGTTTGTCTCTTAAATAAGAC--AGGCACGAAT-T-GTCATGCTAGTCCCCATTCGTTTCA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATG-AGGATTCTAGTAATG--A-TCTCCATTCTTTTCG
* * ** * *
381786 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
** * * *
381821 ATACACAATATTGATTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
381886 AAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
381951 GTACTATAAACACATTTTCCTCATTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
381979 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
382039 ATA-TCAAAATTCATAC-CATAATTATGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
** * *
382099 TTCAAGATT-GGGAGCTA-AGAACACATTC-CGTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTC-CTCATTAGG
* ** * * * * * ** *
382138 AAACATGGCATTGATGCTTTAGTGTCACAAGAAAATG-TTTTATTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * * *
382202 T-AAAGTTTGTCTCTTAAATAAGACAGGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACA--AATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * * ** * * *
382261 ATGATTAGGCTCCATCAAC-TTTGTTTTCTCATAAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * *
382297 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAGACTTTCTTGTCACCAATTTTTGTAAAATCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
382362 AAGTTCGTGCCTCAAATAAGACAAGTGAGGATCCTAGTAATTATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
382427 GTACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * ** * * *
382455 ATAAATGATATTCGCGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTTC-CCTTTTTTCCTT
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGC-TTTCCTGTCACCATTTTT--GT
* ** * * * *
382514 AATA-TCAAAATTTATCC-CATAATTATGACAACCAT--CGATTCTCGTAA-GAGTCTCCATTCC
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCT
* *
382574 TTTCGAGATTAGG-AGT-TAAGAACACATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCACTAT-A-AACACATTCTCC-TCATTAGG
* * ** * * *
382614 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATG-TTTTCTGTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
** * * * * * ** * * *
382677 GT-AAAGTTTATCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * *
382740 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAGG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * * * *
382773 AAACACGACATTGGTTCTTTGGTTTCGTAAGAAAGGCTTTCTTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * *
382838 AAGTTCGTGCCTCAAATGAGACAAATGGGGATTCTAGTGATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
* *
382903 GCACAATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * * * *
382931 ATAAACGGTATTCACGATT-TTT-TTTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-TA
1 ATACATGATATT---GATTCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGTA
* * * * * * *
382991 ATA-ACAAAATTCATCC-CATAATTATGAC-AA-GCATCGATTCTCGTAA-GAGACTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* *
383051 TTCGAGATT-GGGAGCTA-AGAACACATTC-CCTTCATTAGG
118 TTCGTGATTAGGCA-CTATA-AACACATTCTCC-TCATTAGG
* * * * ** * * *
383090 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTTTCTTTCCACCATTTTTGATAGAAG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * * * *
383154 T-AAAGTTTGTCTCTTAAATAAGACAAGCATGA--A-T-T-GTCATGCTAGTCCCCATTCGTTTC
62 TCAAAGTTCGTC-CTCAAATGAGACAA--ATGAGGATTCTAGTAATG--A-TCTCCATTCTTTTC
* * * ** * *
383213 ATGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
383249 ATACACGATATTGATTCTTTGGTTT-AGTAAGTATGGCTTTCTTGTCACCAATTTTTGTATAGTC
1 ATACATGATATTGATTCTTTGGTTTCA-TAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * * * * *
383313 TAAGTTCGTGCCTCAAATGGGAGAAATGAGGATTCTTGTAGTGATCTTCATTCTTTTTGTGATTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
383378 GGGACTATAAACACATTCTCCTCATTAGG
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
383407 ATAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * **
383467 ATA-TCAAAATTCATCC-CATAATTAAGAC-AA-GCATCGATTCTCCTAA-GAGTCTCCATTCTT
59 A-AGTCAAAGTTCGTCCTCA-AA-TGAGACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCTT
* ** *
383527 TTCGAGATTAGG-AGCTACGAACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATAAACACATTCTCC-TCATTAGG
* * ** * * * * *
383566 ATACATGACATTGATGCTTT-GTTGTCGCAAGAAAATGTTTTCTTTTCCACCGTTTTTGATAGAA
1 ATACATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AA
* * * * * * ** * * *
383630 GT-AAAGTTTGACCCTTAAAT-AGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTCATG
61 GTCAAAGTTCG-TCCTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTG
* ** * * *
383692 ATTAGGCACCATAAAC-TTTGTCTTCTCATAAAG
124 ATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * *
383725 ATACATGATATTGATTCTTTGGTTTCGTACGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTCT
1 ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTCA
* * * * * *
383790 AAGTTCCTGCCTCAAATGAGACAATTAAGGGTTCTAGTAATGATCTTCATTCTTTTTGTGATTAG
65 AAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAG
*
383855 GCACTATAAACACATTCTCCTCTTTAGG
129 GCACTATAAACACATTCTCCTCATTAGG
* * * * * * * *
383883 ATAAACGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTTTCTTTGCGCTATTTTCCT-T
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT--TGT
* * * * * * **
383942 AATA-TCAAAATTCAT-ATTATAATTATGA-AAA-GCATAGATTCTCCTAA-GAGTCTCCATTCT
58 AA-AGTCAAAGTTCGTCCTCA-AATGA-GACAAATG-A-GGATTCTAGTAATGA-TCTCCATTCT
* *
384002 TTTCGAGATT-GGGAGCTA-AGAACACCATTC-CCTTCATTAGG
117 TTTCGTGATTAGGCA-CTATA-AACA-CATTCTCC-TCATTAGG
* * * * ** * * ** *
384043 AAACATGACATTGATGCTTTGGTGTCGCAAGAAAATG-TTT-CTTTCCACCAGATTTGATAGATG
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGT-CACCATTTTTG-TA-AAG
* * * ** * * ** * * *
384106 T-AAAGTTTGTCTCTTAAATAAGACAAAAAAGTATTGTCA-TGCTAATCCCCATTCTTTTCATGA
62 TCAAAGTTCGTC-CTCAAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCGTGA
* ** * *
384169 TTAGGCACCAT-AA-ATTTGTCTTCTC-TAAGG
125 TTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * * * *
384199 ATACACGATTATTGATGCTTTGATTTCATAAGAAAGGCTTTCTTGCCACCATTTTTTGTAAAGTC
1 ATACATGA-TATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACCA-TTTTTGTAAAGTC
* * * * * *
384264 TAAGTTCGTACCTCAAATGGGAGAAATGAGGATTCCT-GTAGTGATCTTCATTCTTTTTGTGATT
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATT-CTAGTAATGATCTCCATTCTTTTCGTGATT
*
384328 AGGTACTATAAACACACATTCTTCCTCATTAGG
127 AGGCACTAT-AA-ACACATTC-TCCTCATTAGG
* * * * * * * * *
384361 CTAAATGATATTCACGATT-TTCT--TTTGCAT-GGAAA-TCTTT-ATTTCGCCTTTTTTCCTTA
1 ATACATGATATT---GATTCTT-TGGTTT-CATAAGAAAGGCTTTCCTGTCACCATTTTT--GTA
* * * * * **
384420 ATA-TCAAAATTCATCC-CATAATTATGGACAGCAT--CGATTCTCCT-A-GAGTCTCC-TTCTT
59 A-AGTCAAAGTTCGTCCTCA-AATGA--GACA-AATGAGGATTCTAGTAATGA-TCTCCATTCTT
* *
384478 TTCGAGATTAGG-AGC-A-AAGACACATTC-CCTTCCTTAGG
118 TTCGTGATTAGGCA-CTATAA-ACACATTCTCC-TCATTAGG
* * ** * * * * * *
384516 ATACCATGACATTGATGCTTT--TTGTCGCAAGAAAATGTTTTTCTTTCCACCGTTTTTAATAGA
1 ATA-CATGATATTGATTCTTTGGTT-TCATAAG-AAAGGCTTTCCTGT-CACCATTTTT-GTA-A
* * * * * ** * *
384579 ACGT-AAAGTTTG-CCTCTTAAATAAGACAAATAAGAATTGTCA-TGCTAATCCCCATTCTTTTC
60 A-GTCAAAGTTCGTCCTC--AAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTC
* * * * *
384641 ATGATTAGGCACCAT-CA-ACTTGTCTTCTCA-TAGG
121 GTGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
384675 ATACACGATATTGATTCTTTGGTTTCGTAAGAAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCATAAG-AAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* *
384740 TAAGTTCGTGCCTCAAATGAGAC-AATGAGGATTCTAGTAATGATCTTCATTCTTTT-GTG-TTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
* *
384802 GGCACTATAAACACATTCTCTTCTTTA-G
128 GGCACTATAAACACATTCTCCTCATTAGG
* * * ** * * * *
384830 ATAAACGATATTCATGAT-TTTCTTTTGCAT--GGAA-GCTTTTCTTTGCACTATTTTCT-TAAT
1 ATACATGATATTGAT--TCTTTGGTTT-CATAAGAAAGGCTTTCCTGT-CACCATTTT-TGTAA-
* ** * * * ** *
384890 A-TC-AAGATTCATATTCTAATTATGACAACCAT--CGATTCTCCT-ACGAGTCTCCATTCTTTT
60 AGTCAAAG-TTCGTCCTCAAATGA-GACAA--ATGAGGATTCTAGTAATGA-TCTCCATTCTTTT
* * * *
384950 CGAGA-TAGG-AGCTAGAAACACATT-TCCTTCCTTCGG
120 CGTGATTAGGCA-CTATAAACACATTCTCC-TCATTAGG
* * * * * * *
384986 ATACATGACATTGATGCTTTGGTGTCGCCAGAA-AAATG-TTTTCT-TC-CACGTTTTTGATAGA
1 ATACATGATATTGATTCTTTGGT-T--TCATAAGAAAGGCTTTCCTGTCAC-CATTTTTG-TA-A
* * * ** * * *
385047 AGT-AAAGTT-G-CCTCTTAAATAAGACAAAT-AAGATTGTCA-TGCTAATCCCCATTCTTTTCA
60 AGTCAAAGTTCGTCCTC--AAATGAGACAAATGAGGATTCT-AGTAATGATCTCCATTCTTTTCG
* * ** * *
385107 TGATTAGGCACCATCAAC-TTTGTCTTCTCATCAGG
122 TGATTAGGCACTATAAACACAT-TCTCCTCATTAGG
* * *
385142 ATACACGATA-TGATTC-TTGGTTTCGTAAGGAAAGGGTTTCCTGTCACCAATTTTTGTAAAGTC
1 ATACATGATATTGATTCTTTGGTTTCATAA-GAAAGGCTTTCCTGTCACC-ATTTTTGTAAAGTC
* * * *
385205 TAAGTTCGTGCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTTCATTCTTTTTGTGCTTA
64 AAAGTTCGT-CCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTA
*
385270 GGCACTATTAAA-AGCATTCTCCTCTTTAGG
128 GGCACTA-TAAACA-CATTCTCCTCATTAGG
* *
385300 ATAAACGATATT
1 ATACATGATATT
385312 CACGATTTTC
Statistics
Matches: 25863, Mismatches: 7101, Indels: 7379
0.64 0.18 0.18
Matches are distributed among these distances:
151 3 0.00
152 9 0.00
153 39 0.00
154 66 0.00
155 121 0.00
156 608 0.02
157 1485 0.06
158 7902 0.31
159 12604 0.49
160 2199 0.09
161 713 0.03
162 80 0.00
163 30 0.00
164 4 0.00
ACGTcount: A:0.29, C:0.18, G:0.16, T:0.37
Consensus pattern (156 bp):
ATACATGATATTGATTCTTTGGTTTCATAAGAAAGGCTTTCCTGTCACCATTTTTGTAAAGTCAA
AGTTCGTCCTCAAATGAGACAAATGAGGATTCTAGTAATGATCTCCATTCTTTTCGTGATTAGGC
ACTATAAACACATTCTCCTCATTAGG
Done.