Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1906
Parameters: 2 7 7 80 10 50 1000
Length:  31835

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--68
32
2.1
31
88
2
98
22
20
25
31
1.98
50--198
29
5.4
28
71
10
92
24
16
28
29
1.97
71--152
28
2.9
29
87
1
121
25
17
29
28
1.97
202--473
27
10.0
27
86
4
352
30
15
31
23
1.95
203--473
109
2.5
109
87
1
391
30
15
31
23
1.95
202--481
82
3.4
81
85
7
354
31
14
31
22
1.94
1756--1827
22
3.3
22
72
16
69
9
11
8
70
1.33
1733--1828
44
2.2
45
80
16
112
8
10
11
69
1.36
1743--1816
36
2.1
35
80
14
80
6
12
9
71
1.30
6522--6767
97
2.5
96
87
3
341
30
14
27
27
1.95
10011--10042
14
2.3
14
94
0
55
21
25
18
34
1.96
12949--13162
109
2.0
108
97
0
401
37
16
14
31
1.89
13515--13738
119
1.9
118
85
2
306
43
20
8
28
1.80
13629--13806
78
2.3
78
87
0
250
41
21
9
26
1.84
13753--13898
77
1.9
76
81
8
179
38
24
11
25
1.89
14527--14673
46
3.3
46
74
10
135
48
6
6
38
1.57
15068--15155
35
2.5
35
85
7
117
37
15
17
29
1.91
15212--15281
35
2.0
35
91
0
113
42
22
10
24
1.84
18476--18964
155
3.2
155
78
8
480
26
13
19
40
1.88
22121--22151
3
10.3
3
92
0
53
38
0
32
29
1.57
22668--22705
20
1.9
20
84
10
51
60
5
15
18
1.53
31336--31369
17
2.1
17
88
5
52
88
8
0
2
0.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31337--31381
24
1.9
23
86
4
63
84
11
2
2
0.80

Tables:   1

The End!