Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1909
Parameters: 2 7 7 80 10 50 1000
Length:  27925

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--35
13
1.9
13
100
0
50
36
16
16
32
1.90
835--994
50
3.2
50
83
3
198
30
18
17
34
1.94
5330--5504
50
3.5
50
90
1
271
28
18
18
34
1.95
5330--5533
50
4.1
49
86
3
223
29
16
19
33
1.94
5330--5533
100
2.0
100
87
5
297
29
16
19
33
1.94
5750--5787
19
2.0
19
100
0
76
42
26
15
15
1.87
7177--7265
42
2.1
44
85
8
121
34
3
2
59
1.26
8157--8189
2
17.0
2
93
6
59
48
0
0
51
1.00
9373--9568
97
2.0
99
92
2
333
23
9
21
44
1.82
14660--14766
53
2.0
53
94
0
187
46
4
16
31
1.68
18421--18460
21
1.9
21
89
0
62
37
5
15
42
1.68
18561--18674
35
3.5
35
69
21
95
56
0
1
41
1.16
18619--18674
19
3.1
19
72
12
55
55
0
1
42
1.10
20541--20621
26
3.2
26
61
25
64
23
8
8
59
1.55
20533--20629
50
1.9
50
100
0
194
23
10
10
55
1.64
21448--21562
16
7.2
16
84
3
124
40
23
16
20
1.91
22894--22930
13
2.9
13
92
4
58
62
2
0
35
1.10

Tables:   1

The End!