Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1910
Parameters: 2 7 7 80 10 50 1000
Length:  16896

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
735--1229
42
11.8
42
72
13
254
16
27
19
36
1.94
735--971
83
2.9
82
81
6
273
16
27
19
36
1.93
962--1274
169
1.9
169
84
0
419
18
26
19
36
1.94
950--1274
84
3.9
84
82
1
328
18
26
19
36
1.94
1207--1307
42
2.4
42
83
0
121
16
22
21
38
1.93
1791--1895
31
3.4
31
82
15
130
74
5
0
20
1.02
1805--1886
21
3.9
21
68
23
55
70
7
0
21
1.11
1819--1904
39
2.2
38
81
8
93
75
6
0
17
1.01
1880--1927
17
2.7
18
84
12
64
81
14
0
4
0.84
1881--1920
9
4.6
9
87
6
55
87
10
0
2
0.63
2728--2782
21
2.7
21
80
5
69
34
12
14
38
1.84
2807--2848
21
2.0
21
85
0
57
40
7
21
30
1.80
5261--5453
79
2.5
78
79
11
211
27
22
14
35
1.93
5387--5504
51
2.3
50
82
5
139
28
22
13
35
1.92
5309--5583
130
2.1
131
90
1
437
28
21
13
36
1.91
5439--5643
79
2.6
77
81
11
243
29
21
12
36
1.90
6782--6944
71
2.3
72
83
3
204
32
33
18
15
1.92
6985--7108
64
1.9
65
83
3
160
33
35
17
13
1.89
8791--8931
69
2.0
70
93
1
239
36
17
15
29
1.91
10467--10535
31
2.2
31
92
0
111
47
10
5
36
1.61
11017--11114
34
2.9
33
74
7
90
35
2
2
60
1.20
11064--11113
19
2.7
19
82
11
59
38
2
0
60
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11534--11565
14
2.1
16
88
11
50
46
0
0
53
1.00
11931--11977
2
23.5
2
95
0
85
53
0
0
46
1.00
13465--13533
20
3.3
20
78
11
68
40
0
1
57
1.07
14000--14043
16
2.8
17
80
13
58
43
6
6
43
1.57
16341--16376
2
18.5
2
94
5
65
50
0
0
50
1.00
16542--16585
18
2.5
17
85
10
61
68
0
0
31
0.90

Tables:   1

The End!