Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1913
Parameters: 2 7 7 80 10 50 1000
Length:  51336

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1246--1301
14
3.8
14
73
19
51
62
5
1
30
1.28
6857--6929
27
2.8
26
85
8
94
43
2
1
52
1.24
6871--6932
27
2.3
27
94
0
106
38
1
1
58
1.18
6907--6961
21
2.5
21
82
14
58
43
3
5
47
1.44
9492--9537
21
2.1
22
88
4
67
32
19
28
19
1.96
11008--11053
24
1.9
24
86
8
67
21
8
28
41
1.83
14534--14558
2
12.5
2
100
0
50
52
0
0
48
1.00
15245--15280
2
18.0
2
100
0
72
50
0
0
50
1.00
15895--15940
20
2.3
20
84
0
56
32
4
52
10
1.56
15987--16056
24
2.8
25
77
14
72
47
22
8
21
1.78
15989--16085
27
3.7
27
78
8
94
46
23
8
21
1.78
16073--16130
26
2.3
25
88
5
82
25
13
25
34
1.93
17995--18040
21
2.1
22
84
4
58
19
30
19
30
1.97
20484--20529
20
2.3
20
84
0
56
32
4
52
10
1.56
20576--20645
24
2.8
25
77
14
72
47
22
8
21
1.78
20578--20674
27
3.7
27
78
8
94
46
23
8
21
1.78
20662--20719
26
2.3
25
88
5
82
25
13
25
34
1.93
21826--21934
48
2.3
48
93
1
184
61
6
2
29
1.35
21864--21934
37
1.9
37
88
5
108
61
5
2
29
1.33
22532--22625
47
2.0
47
95
0
170
45
20
1
32
1.58
22548--22624
25
3.2
25
69
10
79
42
22
1
33
1.62
26325--26373
18
2.5
20
87
12
68
8
18
0
73
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26556--26581
5
5.2
5
100
0
52
0
38
0
61
0.96
27691--27748
24
2.3
26
88
5
84
34
25
13
25
1.93
27738--27803
27
2.4
27
87
0
87
25
10
18
45
1.81
30381--30426
21
2.1
22
88
4
67
32
19
28
19
1.96
32233--32290
24
2.3
26
88
5
84
34
25
13
25
1.93
32280--32345
27
2.4
27
89
0
96
24
10
19
45
1.82
32307--32376
24
2.8
24
77
14
70
21
10
22
45
1.81
32908--32958
2
25.0
2
92
4
84
47
1
0
50
1.12
34403--34434
2
16.0
2
100
0
64
50
0
0
50
1.00
37371--37436
32
2.1
32
100
0
132
34
12
12
40
1.80
38852--38935
5
15.8
5
73
7
51
65
3
1
29
1.17
38852--38932
11
7.0
11
75
14
58
65
3
1
29
1.17
38853--38932
6
13.7
6
71
18
62
65
3
1
30
1.18
38826--38943
48
2.5
48
94
1
202
62
5
2
28
1.32
38864--38934
37
1.9
37
85
5
99
63
4
1
30
1.22
43298--43333
18
1.9
19
94
5
65
8
16
0
75
1.04
43516--43541
5
5.2
5
100
0
52
0
38
0
61
0.96
44909--44969
2
30.0
2
93
3
104
47
1
0
50
1.10
46406--46439
2
17.0
2
100
0
68
50
0
0
50
1.00
49373--49438
32
2.1
32
100
0
132
34
12
12
40
1.80

Tables:   1

The End!