Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1931
Parameters: 2 7 7 80 10 50 1000
Length:  19190

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2915--2987
20
3.6
20
81
3
101
35
13
19
31
1.91
2933--3008
21
3.7
21
78
7
93
40
11
18
28
1.86
2915--3008
41
2.3
41
96
3
172
38
12
19
29
1.89
3047--3072
13
2.0
13
100
0
52
38
15
15
30
1.88
5273--5317
21
2.1
21
84
8
56
53
4
20
22
1.63
9162--9242
20
3.8
20
75
15
81
25
14
14
44
1.84
9228--9264
12
2.9
13
88
4
58
32
18
13
35
1.90
11716--11789
20
3.7
20
81
3
103
35
13
20
31
1.91
11734--11809
21
3.7
21
82
3
109
40
11
18
28
1.86
11716--11809
41
2.3
41
100
0
188
38
12
19
29
1.89
11848--11873
13
2.0
13
100
0
52
38
15
15
30
1.88
11830--11892
32
2.0
32
87
6
92
39
15
15
28
1.89
12983--13024
17
2.5
17
96
0
75
47
0
11
40
1.40
15997--16042
21
2.2
21
84
7
58
52
4
19
23
1.64

Tables:   1

The End!