Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1935
Parameters: 2 7 7 80 10 50 1000
Length:  32416

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5010--5041
2
16.0
2
100
0
64
50
0
0
50
1.00
9578--9630
20
2.7
20
88
11
74
30
18
13
37
1.89
9660--9715
19
2.8
20
81
8
69
35
16
16
32
1.90
9701--9727
13
2.1
13
100
0
54
40
14
14
29
1.86
9682--9746
33
2.0
32
87
3
94
40
15
16
27
1.89
10290--10349
18
3.2
19
64
17
52
31
31
5
31
1.79
18388--18418
13
2.4
13
94
0
53
35
12
16
35
1.87
18368--18434
33
2.0
33
88
5
100
32
19
13
34
1.91
18483--18509
13
2.1
13
100
0
54
40
14
14
29
1.86
26042--26208
71
2.4
71
77
2
192
27
24
14
32
1.95
26371--26565
67
2.9
66
78
7
178
30
29
15
23
1.96
27321--27363
20
2.2
20
83
8
52
34
20
9
34
1.85
27400--27454
20
2.8
20
100
0
110
32
20
14
32
1.92
30016--30042
13
2.1
13
100
0
54
40
14
14
29
1.86

Tables:   1

The End!