Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1947
Parameters: 2 7 7 80 10 50 1000
Length:  76838

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
472--659
70
2.7
70
95
0
333
40
14
11
33
1.82
6581--6714
68
2.0
67
86
1
187
22
20
18
38
1.93
8015--8052
19
2.1
19
90
5
60
68
0
0
31
0.90
8919--8953
2
17.5
2
87
0
52
45
2
2
48
1.32
9779--9818
20
2.0
20
90
4
64
27
0
2
70
1.01
9779--9821
19
2.3
19
88
8
61
30
0
2
67
1.03
9794--9882
37
2.4
36
73
15
85
39
1
2
57
1.19
10920--11001
39
2.3
35
78
17
87
51
0
0
48
1.00
10910--11008
50
1.9
52
84
8
132
52
0
0
47
1.00
10943--11005
28
2.3
26
73
10
63
47
0
0
52
1.00
11938--11962
2
12.5
2
100
0
50
52
0
48
0
1.00
12520--12553
2
17.0
2
100
0
68
0
50
0
50
1.00
15299--15336
18
2.1
18
90
0
58
36
0
0
63
0.95
16369--16425
21
2.8
21
82
10
57
59
0
1
38
1.08
17171--17202
2
16.0
2
100
0
64
50
0
0
50
1.00
17505--17548
18
2.4
19
84
3
63
52
0
0
47
1.00
17680--17718
19
2.1
19
85
9
53
51
5
0
43
1.24
18093--18194
16
6.5
16
68
25
58
41
0
0
57
1.05
18279--18334
24
2.4
24
81
3
69
42
0
3
53
1.18
18527--18564
16
2.4
16
86
8
51
60
0
0
39
0.97
20202--20306
51
2.1
51
92
0
174
41
10
28
19
1.84
22025--22061
2
18.5
2
94
0
65
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22743--22769
1
27.0
1
100
0
54
0
100
0
0
0.00
30645--30682
13
2.9
14
80
11
53
68
0
0
31
0.90
31185--31269
15
5.7
15
69
16
52
47
0
1
51
1.08
31447--31506
23
2.5
25
71
17
65
43
0
1
55
1.10
37955--37983
12
2.4
12
100
0
58
65
0
0
34
0.93
38852--38877
9
2.9
9
100
0
52
0
11
0
88
0.52
38897--38931
2
17.5
2
100
0
70
0
51
0
48
1.00
41242--41289
23
2.1
23
84
0
60
43
0
0
56
0.99
52277--52819
280
1.9
280
93
0
924
38
17
19
24
1.93
54179--54902
199
3.8
193
77
10
634
42
14
14
28
1.85
56181--56223
23
1.9
22
85
4
59
48
0
0
51
1.00
61280--61344
34
1.9
34
96
0
121
56
4
16
21
1.58
62146--62170
1
25.0
1
100
0
50
0
100
0
0
0.00
70101--70132
2
16.0
2
100
0
64
0
50
0
50
1.00
70132--70156
2
12.5
2
100
0
50
48
0
0
52
1.00
72236--72270
15
2.2
16
90
5
54
34
0
2
62
1.10
72379--72410
16
2.0
16
93
0
55
59
0
0
40
0.97
72892--72922
10
3.0
10
95
4
53
61
0
0
38
0.96
72899--72983
24
3.4
25
75
9
75
56
0
2
41
1.12
75513--75537
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!