Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1952
Parameters: 2 7 7 80 10 50 1000
Length:  14107

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--6301
475
13.3
472
82
4
6640
35
14
17
31
1.91
9361--9510
52
2.9
51
86
4
219
31
16
18
34
1.93
9498--9522
12
2.1
12
100
0
50
32
16
16
36
1.90
9562--9628
33
2.0
33
88
0
98
40
14
11
32
1.83
9584--9608
13
1.9
13
100
0
50
32
16
16
36
1.90
10393--10679
49
5.9
49
87
6
370
32
17
25
25
1.97
10446--10679
92
2.5
92
85
4
306
31
17
25
26
1.97
10397--10679
141
2.0
143
91
2
462
31
17
25
26
1.97
10672--10934
32
8.2
32
91
5
410
17
19
35
27
1.94
10945--11396
70
6.9
67
77
13
412
32
12
33
21
1.90
11054--11241
94
2.0
96
91
2
308
32
12
31
23
1.91
10945--11396
33
13.8
33
76
14
395
32
12
33
21
1.90
11398--11570
31
5.7
31
77
6
158
28
16
28
26
1.97
11398--11570
61
2.9
62
82
6
205
28
16
28
26
1.97
12517--12541
12
2.1
12
100
0
50
0
0
8
92
0.40
12509--12539
13
2.4
13
94
0
53
0
3
3
93
0.41
12806--12854
12
4.1
12
76
10
55
6
12
4
77
1.09

Tables:   1

The End!