Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1953
Parameters: 2 7 7 80 10 50 1000
Length:  15333

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343--499
52
3.0
51
94
4
271
35
19
17
28
1.94
345--504
50
3.1
53
92
5
272
33
19
16
30
1.94
7049--7073
12
2.1
12
100
0
50
52
8
16
24
1.70
8081--8130
22
2.2
24
82
7
59
52
6
2
40
1.38
8270--8298
12
2.4
12
100
0
58
51
6
0
41
1.28
11106--11139
3
11.3
3
87
0
50
29
38
0
32
1.58
12738--12762
13
1.9
13
100
0
50
32
16
16
36
1.90
12718--12782
33
2.0
33
88
11
98
30
18
15
35
1.92
14462--15042
153
3.8
152
78
7
570
33
9
8
49
1.65
15213--15260
13
3.6
13
80
2
51
45
2
0
52
1.12

Tables:   1

The End!