Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1954
Parameters: 2 7 7 80 10 50 1000
Length:  32318

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
602--718
34
3.7
33
74
20
124
39
9
23
28
1.85
685--740
21
2.6
22
94
5
105
37
10
25
26
1.88
728--758
10
3.1
10
90
0
53
41
6
29
22
1.78
612--758
63
2.3
66
75
18
159
40
8
23
27
1.84
1601--1679
29
2.7
29
100
0
158
17
13
10
58
1.63
3555--4792
159
7.9
155
70
12
510
37
13
19
30
1.90
3611--4005
152
2.6
152
78
7
352
38
11
18
30
1.87
6853--10104
159
20.8
155
69
12
1115
36
14
18
30
1.90
5699--10105
785
5.7
783
80
6
4375
36
14
18
30
1.90
14777--15117
160
2.1
157
80
7
368
39
15
15
29
1.88
15550--15842
159
1.8
158
80
7
344
36
14
19
29
1.92
17609--17674
28
2.4
28
77
10
80
15
15
7
62
1.53
21273--21347
12
6.8
11
78
15
68
40
0
46
13
1.43
21263--21385
42
2.9
42
86
1
156
44
0
43
12
1.41
29812--29921
58
1.9
58
94
0
193
30
20
20
27
1.98
29812--29906
29
3.3
29
71
11
95
31
23
21
24
1.98

Tables:   1

The End!