Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1958
Parameters: 2 7 7 80 10 50 1000
Length:  17477

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2296--2368
20
3.6
20
81
3
101
35
13
19
31
1.91
2296--2388
41
2.3
40
96
1
168
37
12
18
31
1.88
2315--2388
20
3.7
19
74
15
69
39
12
17
31
1.86
2427--2452
13
2.0
13
100
0
52
38
15
15
30
1.88
8558--8636
20
3.7
21
75
15
72
26
13
15
44
1.84
8623--8661
13
3.0
13
96
0
69
30
17
15
35
1.91
10445--10551
53
2.0
53
98
0
205
35
5
25
33
1.79
11159--11231
20
3.6
20
81
3
101
35
13
19
31
1.91
11177--11252
21
3.7
21
78
3
91
40
11
17
30
1.85
11159--11252
41
2.3
41
96
0
170
38
12
18
30
1.88
11291--11316
13
2.0
13
100
0
52
38
15
15
30
1.88
12437--12490
20
2.7
20
91
0
81
35
16
14
33
1.90
17257--17303
19
2.3
20
78
14
51
21
10
2
65
1.33

Tables:   1

The End!