Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1960
Parameters: 2 7 7 80 10 50 1000
Length:  26166

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7290--7525
96
2.5
97
88
4
363
28
13
30
27
1.94
9728--9784
20
2.8
20
91
0
87
45
10
14
29
1.78
12369--12404
14
2.6
14
91
4
56
47
0
0
52
1.00
18207--18457
28
9.0
28
70
7
116
22
18
26
32
1.97
18243--18353
56
2.0
56
87
0
159
24
18
23
33
1.97
18215--18413
84
2.4
84
80
6
199
23
20
24
31
1.98
18243--18374
56
2.4
56
84
0
147
21
18
25
33
1.97
18526--18720
58
3.3
58
77
5
171
24
23
21
30
1.99
18572--18752
58
3.1
57
79
6
157
24
22
19
32
1.98
18572--18737
59
2.8
60
79
8
171
23
23
20
32
1.98
20000--20454
165
2.7
166
79
6
465
29
9
10
51
1.67
20484--20748
131
2.0
132
91
6
432
33
7
12
47
1.68
20626--21068
167
2.7
165
84
7
538
32
10
10
46
1.72
23061--23439
155
2.4
153
81
5
413
23
15
20
41
1.90
25870--25914
11
3.9
12
77
19
51
6
15
0
77
0.96

Tables:   1

The End!