Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1970
Parameters: 2 7 7 80 10 50 1000
Length:  38169

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2657--2695
20
1.9
21
94
5
71
25
15
23
35
1.94
3898--4254
164
2.2
164
87
5
504
30
12
9
47
1.72
4746--4793
10
4.5
11
82
12
57
85
0
14
0
0.60
4746--4811
21
3.0
22
80
10
73
81
0
15
3
0.80
4739--4809
31
2.4
29
75
13
74
78
0
16
4
0.90
5640--5675
16
2.2
17
90
5
56
75
0
2
22
0.94
6586--6616
13
2.4
13
100
0
62
38
6
16
38
1.74
6661--6710
20
2.5
20
87
3
75
36
14
18
32
1.90
11886--11986
29
3.5
29
80
2
114
38
3
21
35
1.72
17177--17217
18
2.2
19
86
4
57
75
0
2
21
0.92
17367--17408
17
2.5
17
88
3
59
21
19
11
47
1.81
21078--21108
15
2.1
15
93
0
53
51
12
9
25
1.70
25834--25867
8
4.2
8
96
0
59
14
0
20
64
1.28
26070--26094
13
1.9
13
100
0
50
32
16
16
36
1.90
26538--26581
20
2.1
22
87
8
65
18
47
29
4
1.68
28551--28575
13
1.9
13
100
0
50
32
16
16
36
1.90
28676--28700
13
1.9
13
100
0
50
36
16
16
32
1.90
28657--28720
33
2.0
32
87
3
92
37
20
14
28
1.91
30432--30461
13
2.3
13
94
0
51
36
16
10
36
1.82
35555--35602
14
3.5
14
80
2
53
39
14
18
27
1.90

Tables:   1

The End!